NO02G04020, NO02G04020 (gene) Nannochloropsis oceanica

Overview
NameNO02G04020
Unique NameNO02G04020
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2507
Alignment locationchr2:1094270..1096776 -

Link to JBrowse

Properties
Property NameValue
DescriptionE3 ubiquitin-protein ligase rnf14
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr2genomechr2:1094270..1096776 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0004842ubiquitin-protein transferase activity
GO:0003824catalytic activity
Vocabulary: Biological Process
TermDefinition
GO:0016567protein ubiquitination
Vocabulary: INTERPRO
TermDefinition
IPR031127E3_UB_ligase_RBR
IPR002867Znf_C6HC
Homology
BLAST of NO02G04020 vs. NCBI_GenBank
Match: EWM30270.1 (e3 ubiquitin-protein ligase rnf14 [Nannochloropsis gaditana])

HSP 1 Score: 793.9 bits (2049), Expect = 4.000e-226
Identity = 417/656 (63.57%), Postives = 465/656 (70.88%), Query Frame = 0
Query:   31 SLPDPPSLAYLXXXXXXXXXXXVMTPSSLSLPYCGDLDAARKARDSPAVRLLTQYRDQQKSGSSSPLTLSRNSSTGSPIRTQTAQAAPSSAVSSLSSLGRRLLELGFSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSNDSSTFPKRFVSGAGDAGSPGGANVKNIHSHHQPPSSPTPQSYFRRVYAKEAAAGIGPVGEGSGEERRHPCMSAACQQQHTHGHASAGISAGFHLQHPQEHCKERTSCNGLLAAXXXXXXXEALSREEGEEGGGEAMIEDPILMMCIPASQAYTVACRCSHAFSTETLYGCIKTALIDDLIPACPLANHPEPAQRCNHLLAQEEVEQVLNRHAPPSQLPSEDRRLWRFRRGRLVDGGLGWVSEKVTEAFLRKGKIAAGCIECPNGSCSCWVEPTRPLEKQRVDCPKCLMTFCTLCKRPYHFRCSCDEVMTITKQWLEWQQHGREPYLTKMAKEDSSYQAALDVFNERRAAHVQEVHTAEQNWGLLVADENYKASRCRRCPYCNRVIERIDGCDTMVCGQNAHGGNIQNGCGVAFDWNEALCYSADIGEKRSIVPFEEVPPSEIARVEHQIMDGTPVKCDICSAKITGPLAMCINCPSFSCCIRCQNKHTRGHVLRLYMDGGG 687
            S  DPP+   L           +MT SS +LPYCGDLDAARKARDSPAVRLLTQYRDQQ+S  SSPL+LSRNSS G+P+  Q    AP  A SS SSL RRLLELGF                                                ++     R VSGAG+ GSP    V+   SHH   SS       + +Y  EAA G+   GEG  E    P         +  G  ++        + P     +  +   ++ A        A+ ++  +    E M+ED +LM C+P S AY + C+C+HAFSTETLYGCIK ALIDDLIPACPLANHP+  QRCN+LL Q+EVE VLNRHAPPSQLP++DR+L  FRRGRLVDGGLGWVSE+VTEAFLRKGKIAAGCIECPNG CS WVEPTRPLEKQRVDCPKCLM FC+LCKRPYHFRCSCDEVMTITKQWLEWQQHGR PYLTKMA+EDSSYQAALDVF  RRAAHVQEV TAEQNWGLLVADENYKASRC+RCP+CNRVIER+DGCDTMVCGQNAHGGNIQNGCG AFDWN+AL Y ADIGEKRSIVPF+EVPP+EIARVEHQIMDGTPVKCD+CSAKI GPLAMCINCPSFSCCIRCQNKHTRGHVLRLYMDG G
Sbjct:   31 SFRDPPA---LMPCGSVSSSSHIMTNSSAALPYCGDLDAARKARDSPAVRLLTQYRDQQRSADSSPLSLSRNSSAGNPMDGQ----APPPAASSFSSLTRRLLELGFKATMRGKRNQKSSDASDAERQNEALAGPLQAAAEQSHSVSRHQPQFDLNTEKGAARAVSGAGETGSP---VVRLNQSHH---SSSGRGMLCQTLY--EAAGGV--TGEGKQESDNWP------PSYYLRGGETS-------KRLPTTFIDKSNTGQTIVPAAAAAIGACAVYKDSPQHMVEEEMLEDLVLMTCVPTSLAYRLDCKCAHAFSTETLYGCIKAALIDDLIPACPLANHPDAPQRCNYLLTQKEVEHVLNRHAPPSQLPAQDRKLLCFRRGRLVDGGLGWVSERVTEAFLRKGKIAAGCIECPNGRCSYWVEPTRPLEKQRVDCPKCLMAFCSLCKRPYHFRCSCDEVMTITKQWLEWQQHGRAPYLTKMAREDSSYQAALDVFKSRRAAHVQEVRTAEQNWGLLVADENYKASRCKRCPHCNRVIERVDGCDTMVCGQNAHGGNIQNGCGQAFDWNDALLYVADIGEKRSIVPFQEVPPAEIARVEHQIMDGTPVKCDVCSAKIMGPLAMCINCPSFSCCIRCQNKHTRGHVLRLYMDGTG 656          
BLAST of NO02G04020 vs. NCBI_GenBank
Match: XP_013760279.1 (hypothetical protein AMSG_02933 [Thecamonas trahens ATCC 50062] >KNC46498.1 hypothetical protein AMSG_02933 [Thecamonas trahens ATCC 50062])

HSP 1 Score: 224.2 bits (570), Expect = 1.300e-54
Identity = 126/362 (34.81%), Postives = 171/362 (47.24%), Query Frame = 0
Query:  334 SQAYTVACRCSHAFSTETLYGCIKTALIDDLIPACPLANHPEPAQRCNHLLAQEEVEQVLNRHAPPSQLPSEDRRLWRFRRGRLVDGGLGWVSEKVTEAFLRKGKIAAGCIECPNGSCSCWVEPTRPLEKQRVDCPKCLMTFCTLCKRPYHFRCSCDEVMTITKQWLEWQQHGREPYLTKMAKEDSSYQAALDVFNERRAAHVQEVHTAEQNWGLLVADENYKASRCRRCPYCNRVIERIDGCDTMVCGQNAHGGNIQNGCGVAFDWNEALCY-SADIGEKRSIVPFEEVPPSEIARVEHQIMDGTP-----VKCDICSAKITGPLAMCINCPSFSCCIRCQ------NKHTRGHVLRLYMD 684
            SQ YTV C  SH F  E +   ++  + ++    C       P   CNH++++ EV Q +           E   L +FR                T+   R      G I CP   C+ +   + P EK+RV C  C   FC+LCK  YH++  C +V    + WLEW   GR  YL ++A  D+ Y+  +  FNE R AH +EV  A Q       DE +KA+ CR CP C RVI R+ GC +MVCG+N HGG+ Q+GCG +F+W  A  Y  A     R    F    P    R EH +  GT      ++CD+C   I GP   CI CP+F+ C+RCQ          R HV  + MD
Sbjct:  325 SQMYTVDCAASHRFCFECIGRMVEMNIRENTEAVC-------PGGECNHVMSEIEVMQTV----------GEGELLTKFR----------------TQQLTRAITSIPGAIPCPTADCTGYEIASMPGEKERVTCSVCRAVFCSLCKNQYHYKYECGQVQQAERAWLEWVTSGRRAYLDQLAAADAEYEERISEFNEAREAHQREVEAALQRLRENENDEEWKAANCRCCPSCGRVINRVAGCSSMVCGRNYHGGDNQDGCGASFNWETAPAYVPATSSHIRVDTEFGTEAPEHSIRTEHILFAGTDGTAVRLRCDLCQQDIFGPEFRCIACPAFAVCLRCQPLAIDEGSPHRTHVFDIIMD 653          
BLAST of NO02G04020 vs. NCBI_GenBank
Match: OCK87233.1 (hypothetical protein K441DRAFT_682755 [Cenococcum geophilum 1.58])

HSP 1 Score: 179.9 bits (455), Expect = 2.700e-41
Identity = 103/336 (30.65%), Postives = 159/336 (47.32%), Query Frame = 0
Query:  332 PASQAYTVACRCSHAFSTETLYGCIKTALIDDLIPACPLANHPEPAQRCNHLLAQEEVEQVLNRHAPPSQLPSEDRRLWRFRRGRLVDGGLGWVSEKVTEAFLRKGKIAAGC-IECPNGSCSCWVEPTRPLEKQRVDCPKCLMTFCTLCKRPYHFRCSCDEVMTITKQWLEWQQHGREPYLTKMAKEDSSYQAALDVFNERRAAHVQEVHTAEQNWGLLVADENYKASRCRRCPYCNRVIERIDGCDTMVCGQNAHGGNIQNGCGVAFDWNEALCYSADIGEKRSIVPFEEVPPSEIARVEHQIMDGTPVKCDICS-AKITGPLAMCINCPSFSCC 666
            P S++Y   C  SH F  +     ++  L  + IP C       P +RC+H ++Q+EV+Q++     P QL                        EK ++  L++     G  + C    C   +      +++R DCPKC   FC+LC   YH+R +C E++     W  W + GR+ Y     ++   ++     +   +  H  +   A Q +  L  DE YKA R +RCP+C+RV+ERI GCD M CGQ+ +GGN+Q+GCG  F W  AL Y+A+      I  F    P + A   H+      V+CD C  A+I G    C++CP++  C
Sbjct:   79 PRSESYIFDCVSSHTFCLDCSRETVRGTLEGNGIPKC-------PGERCDHEISQQEVKQLV-----PEQL------------------------EKYSDLLLKRLFTQQGTFLVC---KCRHVMAARYDGQQERCDCPKCHYVFCSLCNEDYHYRSTCQELVQYRNIWTAWLRQGRKAYHQTQNQQRKEHEKQTKEYIAAQKKHEDDRAAALQAFETLQRDEQYKAQRAKRCPHCSRVVERITGCDHMTCGQDKYGGNVQSGCGKGFSWGSALPYTAEAANTPKIDNFILQAPQQAADFRHEF-----VRCDNCGVAEIVGLRFECLHCPAYDLC 370          
BLAST of NO02G04020 vs. NCBI_GenBank
Match: OCK77743.1 (hypothetical protein K432DRAFT_395346 [Lepidopterella palustris CBS 459.81])

HSP 1 Score: 173.7 bits (439), Expect = 2.000e-39
Identity = 102/352 (28.98%), Postives = 152/352 (43.18%), Query Frame = 0
Query:  334 SQAYTVACRCSHAFSTETLYGCIKTALIDDLIPACPLANHPEPAQRCNHLLAQEEVEQVLNRHAPPSQLPSEDRRLWRFRRGRLVDGGLGWVSEKVTEAFLRKGKIAAGCIECPNGSCSCWVEPTRPLEKQRVDCPKCLMTFCTLCKRPYHFRCSCDEVMTITKQWLEWQQHGREPYLTKMAKEDSSYQAALDVFNERRAAHVQEVHTAEQNWGLLVADENYKASRCRRCPYCNRVIERIDGCDTMVCGQNAHGGNIQNGCGVAFDWNEALCYSADIGEKRSIVPFEEVPPSEIARVEHQIMDGTPVKCDICSAK-ITGPLAMCINCPSFSCCIRCQNK---HTRGHVLRLY 682
            S++Y   C  SH F  +     ++ +L  + IP C       P +RC H ++Q+E++Q++     P+ L                        +K     L++       + C    C   +      +++R +CPKC   FC+LC   YH+R +C E+      W EW + GR  Y                                   +  L  DE YKA R RRCP CNRV+ERI+GCD M CGQ+ +GGN+Q+GCG  F W  A  Y+A+     +I  F    P + A   H+       +CD C    I G    C+NCPSF  C +C++    H + HV R++
Sbjct:  109 SESYIFDCISSHTFCLDCSRESVQGSLDGNSIPKC-------PGERCKHEISQQEIKQLV-----PTLL------------------------DKYNNLLLKRLFAQGTFLVC---KCKHVMAAAYDGQQERCECPKCNYVFCSLCNEDYHYRSTCQELKQYRNIWTEWLRQGRRAYHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLAFQTLQKDEQYKAQRARRCPNCNRVVERIEGCDAMTCGQDKYGGNVQSGCGREFRWANARPYAAETANMPNIEQFVAQAPQQAADFRHEF-----TRCDHCGVNDIVGLRFECLNCPSFDLCSKCEHNGIGHDQRHVFRIW 416          
BLAST of NO02G04020 vs. NCBI_GenBank
Match: OCL07284.1 (hypothetical protein AOQ84DRAFT_377855 [Glonium stellatum])

HSP 1 Score: 155.6 bits (392), Expect = 5.500e-34
Identity = 96/322 (29.81%), Postives = 142/322 (44.10%), Query Frame = 0
Query:  332 PASQAYTVACRCSHAFSTETLYGCIKTALIDDLIPACPLANHPEPAQRCNHLLAQEEVEQVLNRHAPPSQLPSEDRRLWRFRRGRLVDGGLGWVSEKVTEAFLRKGKIAAGC-IECPNGSCSCWVEPTRPLEKQRVDCPKCLMTFCTLCKRPYHFRCSCDEVMTITKQWLEWQQHGREPYLTKMAKEDSSYQAALDVFNERRAAHVQEVHTAEQNWGLLVADENYKASRCRRCPYCNRVIERIDGCDTMVCGQNAHGGNIQNGCGVAFDWNEALCYSADIGEKRSIVPFEEVPPSEIARVEHQIMDGTPVKCDICS-AKITG 652
            P S++Y   C  SH F  +     ++  L  + +P C       P +RC+H ++Q+EV+Q++     P  L                        EK ++  L++     G  + C    C   +      +++R DCPKC   FC+LC   YH+R +C E++     W  W + GR+ Y                               A Q +  L  DE YKA R +RCP+C RV+ERI GCD M CGQ+ +GGN+Q+GCG  F W  AL Y+A+      I  F    P + A   H++     V+CD C  A+I G
Sbjct:   79 PRSESYIFDCISSHTFCMDCSRETVRGTLEGNGVPKC-------PGERCDHEISQQEVKQLV-----PELL------------------------EKYSDLLLKRLFAQQGTFLVC---KCRHVMAARYDGQQERCDCPKCHYVFCSLCNEDYHYRSTCQELIQYRNIWTAWLRQGRKVYHQTQXXXXXXXXXXXXXXXXXXXXXXXXXXXALQAFETLQRDEQYKAQRAKRCPHCQRVVERITGCDHMTCGQDKYGGNVQSGCGKEFSWASALPYTAEAANTPKIDNFVLQAPKQAADFRHEL-----VRCDNCGVAEIIG 356          
BLAST of NO02G04020 vs. NCBI_GenBank
Match: XP_005771739.1 (hypothetical protein EMIHUDRAFT_118020 [Emiliania huxleyi CCMP1516] >EOD19310.1 hypothetical protein EMIHUDRAFT_118020 [Emiliania huxleyi CCMP1516])

HSP 1 Score: 155.2 bits (391), Expect = 7.200e-34
Identity = 94/375 (25.07%), Postives = 154/375 (41.07%), Query Frame = 0
Query:  330 CIPASQAYTVACRCSHAFSTETLYGCIKTALIDDLIPACPLANHPEPAQRCNHLLAQEEVEQVLNRHAPPSQLPSEDRRLWRFRRGRLVDGGLGWVSEKVTEAFLRKGKIAAGCIECPNGSCSCWVEPTRPL--EKQRVDCPK--CLMTFCTLCKRPYHFRCSCDEVMTITKQWLEWQQHGREPYLTKMAKEDSS-YQAALDVFNERRAAHVQEVHTAEQNWGLLVADENYKASRCRRCPYCNRVIERIDGCDTMVCGQNAHGGNIQNGCGVAFDW-----NEALCYSADIGEKRSIVPFEEVPPSEI-------------------------ARVEHQIMDGTPVKCDICSAKITGPLAMCINCP-SFSCCIRC 669
            C   +    +    +H    E  + C +++L + L+PACP  +     Q+C  +  +  +  +     PPSQ  +                     + K+ E +L   +   G ++C    C  W  P  P     QR++C +  C   FC+ C++P+H R +C E + ++ +W+ + Q    P+L    + D   +  AL    + + +       A   +  L   E +K + C+RCP+C RV+E+++GCD +VCG +AHGGN Q GCG  F W     N AL Y AD+                                          AR EHQ+  G  V+C  C   + GP   C+ C      C++C
Sbjct:   11 CFDTAPLSPLCASSAHGLCAECCWRCCESSLGEGLVPACPFKD-----QKCGAVSKRRALTALDAAQLPPSQRET--------------------FASKLDEVYLGAERARRGAVQCIGKGCEEWYVPPVPHSDRPQRLECSRRACGAVFCSACRQPFHVRSTCAEALRLSARWVRFLQDELAPFLQAAVRLDGERWSPALAAHAQAKGSLDDATRDALSRFDELRRMELWKQAHCKRCPHCRRVVEKMEGCDMLVCGSDAHGGNQQRGCGKPFVWCEGQPNSALKYEADLRGAADYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDAREEHQVRPGVAVRCSGCDDPVVGPRLQCVQCEVPVELCVKC 360          
BLAST of NO02G04020 vs. NCBI_GenBank
Match: CBJ28394.1 (zinc finger family protein, putative [Ectocarpus siliculosus])

HSP 1 Score: 140.6 bits (353), Expect = 1.800e-29
Identity = 85/268 (31.72%), Postives = 119/268 (44.40%), Query Frame = 0
Query:  325 PILMMCIPASQAYTVACRCSHAFSTETLYGCIKTALIDDLIPACPLANHPEPAQRCNHLLAQEEVEQV--LNRHAPPSQ----------LPSEDRRLWRFRRGRLVDGGLGWVSEKVTEAFLRKGKIAAGCIECPNGSCSCWVEPTRPLEKQRVDCPKCLMTFCTLCKR-PYHFRCSCDEVMTITKQWLEWQQHGREPYLTKMAKEDSSYQAALDVFNERRAAHVQEVHTAEQNWGLLVADENYKASRCRRCPYCNRVIERIDGCDTM 580
            P+    I A + +TV C+  H F  + L+   +  L+D LIPACPL+       +C H L QEEVE+V  L  ++  S           +  EDRR     R  L                 R+G  + G I C +  C  W+ P      QRV C  CL+ FC  CKR PYH+   CDEV+ ++++W  W   G+  +L  MA +D  ++A L                           E +K  RCR CP+C R IE++ GCD M
Sbjct:   71 PVCFEDIQAGEVFTVDCKEQHTFCVDCLHHHCRVQLLDSLIPACPLS-----TMKCGHELGQEEVERVFLLKSYSSASAGGKDGGDTTGVSEEDRRALDTCRNLLT----------------RRGLESTGAIPCVSPECGNWMVPEG--GGQRVKCASCLVEFCRRCKRSPYHYAAECDEVVRLSREWSHWLSEGKAAFLGAMAAQDDQHRALLXXXXXXXXXXXXXXXXXXXXXXXXXXMEEWKEQRCRCCPHCGRTIEKLSGCDMM 315          
BLAST of NO02G04020 vs. NCBI_GenBank
Match: XP_005779593.1 (hypothetical protein EMIHUDRAFT_205120 [Emiliania huxleyi CCMP1516] >EOD27164.1 hypothetical protein EMIHUDRAFT_205120 [Emiliania huxleyi CCMP1516])

HSP 1 Score: 137.9 bits (346), Expect = 1.200e-28
Identity = 84/345 (24.35%), Postives = 141/345 (40.87%), Query Frame = 0
Query:  330 CIPASQAYTVACRCSHAFSTETLYGCIKTALIDDLIPACPLANHPEPAQRCNHLLAQEEVEQVLNRHAPPSQLPSEDRRLWRFRRGRLVDGGLGWVSEKVTEAFLRKGKIAAGCIECPNGSCSCWVEPTRPL--EKQRVDCPK--CLMTFCTLCKRPYHFRCSCDEVMTITKQWLEWQQHGREPYLTKMAKEDSS-YQAALDVFNERRAAHVQEVHTAEQNWGLLVADENYKASRCRRCPYCNRVIERIDGCDTMVCGQNAHGGNIQNGCGVAFDWNEALCYSADIGEKRSIVPFEEVPPSEIARVEHQIMDGTPVKCDICSAKITGPLAMCINCP-SFSCCIRC 669
            C   +    +    +H    E  + C +++L + L+PACP  +     Q+C  +  +  +  +     PPSQ  +                     + K+ E +L   +   G ++C    C  W  P  P     QR++C +  C   FC+ C++P+H R +C E + ++ +W+ + Q    P+L    + D   +  AL    + + +       A   +  L   E +K + C+RCP+C RV+E+++GCD +VCG +AHGGN Q GCG  F W E    SA  G                                 C   + GP   C+ C      C++C
Sbjct:   13 CFDTAPLSPLCASSAHGLCAECCWRCCESSLGEGLVPACPFKD-----QKCGAVSKRRALTALDAAQLPPSQRET--------------------FASKLDEVYLGAERARRGAVQCIGKGCEEWYVPPVPHSDRPQRLECSRRACGAVFCSACRQPFHVRSTCAEALRLSARWVRFLQDELAPFLQAAVRLDGERWSPALAAHAQAKGSLDDATRDALSRFDELRRMELWKQAHCKRCPHCRRVVEKMEGCDMLVCGSDAHGGNQQRGCGKPFVWCEGQPNSALNG---------------------------------CDDPVVGPRLQCVQCEVPVELCVKC 299          
BLAST of NO02G04020 vs. NCBI_GenBank
Match: CUG91332.1 (Hypothetical protein, putative [Bodo saltans])

HSP 1 Score: 72.0 bits (175), Expect = 8.100e-9
Identity = 69/280 (24.64%), Postives = 108/280 (38.57%), Query Frame = 0
Query:  457 PTRPLEKQRVDCPKCLMTFCTLCKRPYH-FRCSCDEVMTITKQWLEWQQH------------GREPYLTKMAKEDSSYQAALD---VFNERRAAHVQEV-----HTAEQNWGLLVADENY-------KASRCRRCPYCNR-VIERIDGCDTMVCGQNAH-GGNIQNGCGVAFDW------NEALCYSADIGEKRSIVPFEEVPPSEIARVEHQIMDGTPV--------KCDICSAKITGPL-AMCINC-PSFSCCIRC--QNKHTR--------GHVLRL 681
            P  P     + CP C + +C  CK   H    +C +V     QW  +  +              E  + K+A  D +  AA++    F + + A + E      H  +Q   +   +  +       K    RRCP+C R  I R+  C  M+CG N+H GGN Q GC   FD+       + +  + +  EK ++V       + +  V+ QI    PV         C  C   + G     C +C P +  C+ C   NKH          GH+L +
Sbjct:  553 PKTPGAPVGITCPSCSIRWCAQCKCAEHPHAANCGDVTNAKHQWPVYSDNMTRFANVVLGDLDSEVMVVKLALTDRA--AAVERRRTFLQSQIARINEEIADLDHAIQQRHQMNAFEMTWDGDGGDPKVIGSRRCPHCGRQPIRRVQFCQYMICGMNSHGGGNFQGGCMKPFDYCSPEAAYQPISTAGEEAEKANLVSKRNELTAHLEGVDQQIDFPPPVLADHWPALSCSQCKKGLLGDFHVQCYHCEPPYLLCVYCIRGNKHNEHADPTRESGHMLTI 830          
BLAST of NO02G04020 vs. NCBI_GenBank
Match: CUG91330.1 (Hypothetical protein, putative [Bodo saltans])

HSP 1 Score: 72.0 bits (175), Expect = 8.100e-9
Identity = 72/283 (25.44%), Postives = 108/283 (38.16%), Query Frame = 0
Query:  457 PTRPLEKQRVDCPKCLMTFCTLCKRPYH-FRCSCDEVMTITKQWLEWQQH------------GREPYLTKMAKEDSSYQAALD---VFNERRAAHV--------------QEVHTAEQNWGLLVADENY-KASRCRRCPYCNR-VIERIDGCDTMVCGQNAH-GGNIQNGCGVAFDW------NEALCYSADIGEKRSIVPFEEVPPSEIARVEHQIMDGTPV--------KCDICSAKITGPL-AMCINC-PSFSCCIRC--QNKHTR--------GHVLRL 681
            P  P     + CP C + +C  CK   H    +C +V     QW  +  +              E  + K+A  D +  AAL+    F + + A +               +++  E  W     D  Y K    RRCP+C+R  I R+  C  MVCG N+H GGN Q GC   FD+       + +    +  EK ++V       + +  V+ QI    PV         C  C   + G     C +C P +  C+ C   NKH          GH+L +
Sbjct:  831 PETPGAPVGIRCPSCSIRWCAQCKCAEHPHAANCGDVTNAKHQWSVYSDNMTRFANVVLGDLDSEVMVVKLALTDRA--AALERRRTFLQSQIARINGEIADLDHAIQQRHQMNAFEMTWD---GDGGYPKVIGSRRCPHCSRQPIRRVQFCQYMVCGMNSHGGGNFQGGCMKPFDYCSPEAAYQEISTKGEEAEKANLVSKRNELTAHLEGVDQQIDFPPPVLADHWPALACSQCKKGLLGDFHVQCYHCEPPYLLCVYCIRGNKHNEHADPTRESGHMLTI 1108          
The following BLAST results are available for this feature:
BLAST of NO02G04020 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 11
Match NameE-valueIdentityDescription
EWM30270.14.000e-22663.57e3 ubiquitin-protein ligase rnf14 [Nannochloropsis... [more]
XP_013760279.11.300e-5434.81hypothetical protein AMSG_02933 [Thecamonas trahen... [more]
OCK87233.12.700e-4130.65hypothetical protein K441DRAFT_682755 [Cenococcum ... [more]
OCK77743.12.000e-3928.98hypothetical protein K432DRAFT_395346 [Lepidoptere... [more]
OCL07284.15.500e-3429.81hypothetical protein AOQ84DRAFT_377855 [Glonium st... [more]
XP_005771739.17.200e-3425.07hypothetical protein EMIHUDRAFT_118020 [Emiliania ... [more]
CBJ28394.11.800e-2931.72zinc finger family protein, putative [Ectocarpus s... [more]
XP_005779593.11.200e-2824.35hypothetical protein EMIHUDRAFT_205120 [Emiliania ... [more]
CUG91332.18.100e-924.64Hypothetical protein, putative [Bodo saltans][more]
CUG91330.18.100e-925.44Hypothetical protein, putative [Bodo saltans][more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL016nonsL016Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR032ncniR032Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR000ngnoR000Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK007058NSK007058Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO02G04020.1NO02G04020.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO02G04020.1NO02G04020.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO02G04020 ID=NO02G04020|Name=NO02G04020|organism=Nannochloropsis oceanica|type=gene|length=2507bp
ATGGAGAAATCTGGTGAAATTCAGGAAAATGTGAGTATGGGCTCCATCTC
GTCAAGACCTTTCGCGTCTGTCTCCTCGGCCTCTGTATCGTCCTTGCCGG
ACCCGCCATCGCTGGCATACCTTCAGTCCTCTTCCTCCTCTTCCTCCTCC
TCCCGTGTTATGACACCTTCGTCCTTGTCCCTTCCATACTGTGGGGACCT
AGACGCAGCCCGTAAGGCCCGAGATTCACCTGCCGTCAGgtgagtttgca
atatgaaagggattttgtcgtatatatgtcatcggaaggccgccgctctg
attgatggctattttcattgcgtttatttcgctcgaaagctccatgctca
atgcctgcatgtgtgtgtctggtcaatgaatcgaccgtcagagtatgata
acgatattgctgtgctcctatttggcacgagagagaggggcgcagaatga
tgactacctgttagcccccctctaacaggagagtgagggtttcgtatagc
agcagtagagaacgaatgtgaccaacaacggctcgagcagattatttcct
gtctgtctatgctcaggaagggaacgggcaaaacagggcgacgttgagcg
tggcatacacgtaaaaataggctgatcaaaaaagaaattctcatccatcc
tcctccttttcccatccaaactaaaaaagGCTTCTAACTCAGTATCGCGA
CCAGCAAAAATCCGGTTCCTCTTCTCCCTTGACTCTAAGTCGGAATTCTA
GCACAGGTAGTCCCATTAGAACTCAAACTGCGCAAGCCGCGCCATCATCA
GCGGTGTCTTCTTTGTCTTCGCTCGGCCGGCGGCTGCTCGAGTTGGGCTT
CAGCGGTAGTAGCAGCAGCAGCCGCCGCAGCAGCAGCAATAAAGCTGTCG
CCACGAAGGGAGAAACCCCAGCGGAGGAAGGAAGTCGGTCTGTGTCTCAC
TATCATCACCAACAGCAGCAGCAGCATTACGGCAAGGGCAGTAATGACAG
TAGCACGTTCCCAAAACGCTTTGTGTCTGGCGCGGGCGATGCAGGCAGCC
CTGGTGGCGCCAACGTTAAGAACATTCATAGCCACCATCAGCCCCCATCG
TCGCCGACACCTCAGTCCTATTTCAGGAGAGTATACGCCAAAGAAGCCGC
AGCAGGGATTGGGCCTGTAGGGGAGGGCTCCGGAGAGGAGCGGCGACACC
CATGTATGAGCGCTGCTTGTCAGCAGCAGCACACGCACGGACACGCCTCT
GCAGGGATTAGCGCTGGCTTCCATCTGCAGCATCCTCAAGAGCATTGCAA
AGAAAGAACATCATGTAATGGGCTGCTGGCAGCTGCAGCAGCGGCGACGG
AGGCAGAGGCACTTTCGAGGGAAGAAGGGGAGGAGGGAGGGGGGGAGGCG
ATGATCGAGGATCCAATCTTGATGATGTGCATCCCGGCTTCGCAAGCGTA
TACGGTGGCTTGTCGGTGCTCCCATGCTTTTAGCACGGAAACACTGTATG
GGTGTATCAAGACTGCCTTGATCGACGACCTGATTCCTGCTTGTCCTCTC
GCGAATCACCCCGAGCCCGCTCAACGGTGCAACCACCTGCTGGCACAAGA
AGAAGTCGAACAGGTTCTGAATCGCCATGCGCCCCCCTCTCAGCTGCCGT
CGGAAGATCGGAGGCTGTGGCGGTTTCGGCGGGGTCGGCTGGTGGACGGA
GGGTTGGGTTGGGTTAGCGAGAAAGTGACCGAGGCGTTTCTGAGGAAAGG
GAAGATAGCGGCGGGCTGTATTGAGTGTCCAAATGGTAGTTGTAGCTGCT
GGGTTGAGCCCACAAGGCCCTTAGAGAAGCAAAGGGTGGACTGCCCGAAG
TGCTTAATGACGTTTTGTACCTTGTGCAAGCGTCCATATCACTTTAGATG
TTCCTGTGATGAAGTCATGACAATCACTAAGCAATGGTTGGAGTGGCAGC
AGCACGGCCGGGAGCCATACCTCACCAAGATGGCAAAGGAAGATTCGAGC
TACCAGGCAGCACTGGATGTATTCAATGAACGGAGGGCTGCACACGTGCA
GGAGGTGCACACGGCGGAGCAAAACTGGGGTTTGTTGGTCGCGGATGAGA
ACTACAAGGCGAGCCGATGTAGGAGATGTCCGTACTGTAATCGCGTGATT
GAACGGATTGATGGATGTGATACCATGGTGTGTGGTCAGAATGCGCATGG
CGGGAACATTCAAAATGGGTGTGGAGTGGCTTTTGATTGGAATGAGGCAC
TGTGTTATAGTGCTGACATAGGGGAGAAAAGATCAATTGTTCCTTTTGAG
GAGGTGCCGCCGTCCGAAATTGCGCGGGTGGAGCACCAGATCATGGACGG
GACGCCTGTGAAGTGTGATATTTGCTCGGCCAAGATCACTGGGCCTTTAG
CTATGTGTATCAATTGTCCATCGTTTTCATGTTGTATTCGGTGTCAGAAT
AAGCATACGCGTGGACACGTGTTGAGGCTTTACATGGACGGGGGGGGGGA
AAGGTAG
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protein sequence of NO02G04020.1

>NO02G04020.1-protein ID=NO02G04020.1-protein|Name=NO02G04020.1|organism=Nannochloropsis oceanica|type=polypeptide|length=689bp
MEKSGEIQENVSMGSISSRPFASVSSASVSSLPDPPSLAYLQSSSSSSSS
SRVMTPSSLSLPYCGDLDAARKARDSPAVRLLTQYRDQQKSGSSSPLTLS
RNSSTGSPIRTQTAQAAPSSAVSSLSSLGRRLLELGFSGSSSSSRRSSSN
KAVATKGETPAEEGSRSVSHYHHQQQQQHYGKGSNDSSTFPKRFVSGAGD
AGSPGGANVKNIHSHHQPPSSPTPQSYFRRVYAKEAAAGIGPVGEGSGEE
RRHPCMSAACQQQHTHGHASAGISAGFHLQHPQEHCKERTSCNGLLAAAA
AATEAEALSREEGEEGGGEAMIEDPILMMCIPASQAYTVACRCSHAFSTE
TLYGCIKTALIDDLIPACPLANHPEPAQRCNHLLAQEEVEQVLNRHAPPS
QLPSEDRRLWRFRRGRLVDGGLGWVSEKVTEAFLRKGKIAAGCIECPNGS
CSCWVEPTRPLEKQRVDCPKCLMTFCTLCKRPYHFRCSCDEVMTITKQWL
EWQQHGREPYLTKMAKEDSSYQAALDVFNERRAAHVQEVHTAEQNWGLLV
ADENYKASRCRRCPYCNRVIERIDGCDTMVCGQNAHGGNIQNGCGVAFDW
NEALCYSADIGEKRSIVPFEEVPPSEIARVEHQIMDGTPVKCDICSAKIT
GPLAMCINCPSFSCCIRCQNKHTRGHVLRLYMDGGGER*
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Synonyms
Publications