NO02G04000, NO02G04000 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO02G04000 vs. NCBI_GenBank
Match: EWM30326.1 (ubiquitin-conjugating enzyme catalytic domain protein [Nannochloropsis gaditana]) HSP 1 Score: 329.3 bits (843), Expect = 1.100e-86 Identity = 153/170 (90.00%), Postives = 162/170 (95.29%), Query Frame = 0 Query: 46 ATEEGMVSILGIGGKSVRTSQSKGRRRQPAEIRIQKDLAEVELGTAATLTFPNPNDLTDFLVEIMPESGFWTGARFKFSFRFPAEYPHTPPKVICQTRILHPNIDWEGNVCLNILREEWKPILDVNAIIYGLLHLFAEPNPDDPLNKEAAELFRADIRQFERIVKQTLRG 216 ATE G VSI+GIGGKSV+ +QSKGRRRQPAE+RIQKDLAEVELGTAATL FPNPNDLTDF+VE+ PESGFWTGA+F F+FRFPAEYPHTPPKV CQTRILHPNIDWEGNVCLNILREEWKPILDVNAIIYGLLHLFAEPNPDDPLNKEAAELFRAD RQFER+VKQTLRG Sbjct: 628 ATENGTVSIMGIGGKSVKAAQSKGRRRQPAELRIQKDLAEVELGTAATLIFPNPNDLTDFIVEVSPESGFWTGAKFTFTFRFPAEYPHTPPKVTCQTRILHPNIDWEGNVCLNILREEWKPILDVNAIIYGLLHLFAEPNPDDPLNKEAAELFRADARQFERVVKQTLRG 797
BLAST of NO02G04000 vs. NCBI_GenBank
Match: XP_002183463.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC45163.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 235.7 bits (600), Expect = 1.700e-58 Identity = 104/173 (60.12%), Postives = 134/173 (77.46%), Query Frame = 0 Query: 48 EEGMVSILGIGG-KSVRTSQSKG-RRRQPAEIRIQKDLAEVELGTAATLTFPNPNDLTDFLVEIMPESGFWTGARFKFSFRFPAEYPHTPPKVICQTRILHPNIDWEGNVCLNILREEWKPILDVNAIIYGLLHLFAEPNPDDPLNKEAAELFRADIRQFERIVKQTLRGSVI 219 + VS+LG+GG K + + K ++R P EIRIQKD+AE++ G AT+ FPN NDLT F V I P+SG+W GA + F+F P YPH+PPKV CQT+I HPNID +G VCLNILRE+WKP+LD+N ++YGL++LF EPNPDDPLN EAAELFR D+RQFER+V +TLRG ++ Sbjct: 39 DNNKVSLLGVGGKKQTKNGECKATKKRSPGEIRIQKDIAELDGGNVATIDFPNANDLTSFHVAISPDSGYWKGATYHFTFTIPPHYPHSPPKVECQTKIYHPNIDLQGKVCLNILREDWKPVLDINGVVYGLIYLFYEPNPDDPLNHEAAELFRKDVRQFERLVSRTLRGGIL 211
BLAST of NO02G04000 vs. NCBI_GenBank
Match: CBN73839.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 233.4 bits (594), Expect = 8.500e-58 Identity = 102/171 (59.65%), Postives = 137/171 (80.12%), Query Frame = 0 Query: 50 GMVSILGIGGKSVRTSQSK--GRRRQPAEIRIQKDLAEVELGTAATLTFPNPNDLTDFLVEIMPESGFWTGARFKFSFRFPAEYPHTPPKVICQTRILHPNIDWEGNVCLNILREEWKPILDVNAIIYGLLHLFAEPNPDDPLNKEAAELFRADIRQFERIVKQTLRGSVI 219 G + +LGIGG+ + +K G ++ P EIRIQKD+A+++ G+ A +TFPNPN+LT F V++ P+SGFW GA + F+F PA YPH PPKV+C+T+I HPNI+ +GNVCLNILRE+WKP+LD+NA+IYGL++LF EPNP+DPLN EAAEL+R +I QFER VK+TL G V+ Sbjct: 24 GKLHVLGIGGRRAKRGSAKATGTKKTPGEIRIQKDIADLDGGSVAEITFPNPNNLTSFKVKVQPDSGFWKGASYHFTFSIPALYPHDPPKVLCETKIYHPNINLQGNVCLNILREDWKPVLDINAVIYGLIYLFYEPNPEDPLNHEAAELYRDNISQFERTVKRTLAGCVM 194
BLAST of NO02G04000 vs. NCBI_GenBank
Match: BAO65811.1 (ubiquitin conjugating enzyme 12 [Ciliophrys infusionum]) HSP 1 Score: 229.6 bits (584), Expect = 1.200e-56 Identity = 106/169 (62.72%), Postives = 135/169 (79.88%), Query Frame = 0 Query: 48 EEGMVSIL-GIGGKSVRTSQSKGRRRQPAEIRIQKDLAEVELGTAATLTFPNPNDLTDFLVEIMPESGFWTGARFKFSFRFPAEYPHTPPKVICQTRILHPNIDWEGNVCLNILREEWKPILDVNAIIYGLLHLFAEPNPDDPLNKEAAELFRADIRQFERIVKQTLRG 216 E G +S++ GIGG++V T + K ++R P EIRIQKD+AE++ GT A FP+ +DLT F V I P+SGFW GA ++FSF PA+YPH PKV+C TRI HPNI+ EGNVCLNILRE+WKP+LD+NA+IYGL++LF EPNPDDPLN EAA+LFR +I FER V++TLRG Sbjct: 34 EHGPISVVDGIGGEAVNTGKKK-KKRTPGEIRIQKDIAELDGGTVARHEFPSNSDLTKFFVIITPDSGFWRGATYRFSFTIPAQYPHEAPKVLCLTRIYHPNINLEGNVCLNILREDWKPVLDINAVIYGLIYLFYEPNPDDPLNHEAADLFRTNIASFERTVQRTLRG 201
BLAST of NO02G04000 vs. NCBI_GenBank
Match: GAX22876.1 (ubiquitin-conjugating enzyme E2 M [Fistulifera solaris]) HSP 1 Score: 227.6 bits (579), Expect = 4.700e-56 Identity = 104/176 (59.09%), Postives = 134/176 (76.14%), Query Frame = 0 Query: 46 ATEEGMVSILGIGGKS-VRTSQS--KGRRRQPAEIRIQKDLAEVELGTAATLTFPNPNDLTDFLVEIMPESGFWTGARFKFSFRFPAEYPHTPPKVICQTRILHPNIDWEGNVCLNILREEWKPILDVNAIIYGLLHLFAEPNPDDPLNKEAAELFRADIRQFERIVKQTLRGSVI 219 A + VS+LGIGGK V+ +S G++R P EIRIQ D+AE++ G AT+ FPNPNDLT F V + P++G W GA + F+F P YPH+PP+V C T+I HPNID +G VCLNILRE+WKP+LD+N++IYGL++LF EPNPDDPLN EAAELFR D QFER+V +TLRG ++ Sbjct: 33 ADQPRKVSLLGIGGKKMVKNGESGMTGKKRTPGEIRIQTDIAELDGGDVATIKFPNPNDLTLFDVSVTPDTGLWKGATYHFTFTIPPHYPHSPPRVECNTKIYHPNIDLQGKVCLNILREDWKPVLDINSVIYGLIYLFYEPNPDDPLNHEAAELFRKDKTQFERLVMRTLRGGIL 208
BLAST of NO02G04000 vs. NCBI_GenBank
Match: XP_009037603.1 (hypothetical protein AURANDRAFT_53859 [Aureococcus anophagefferens] >EGB07605.1 hypothetical protein AURANDRAFT_53859 [Aureococcus anophagefferens]) HSP 1 Score: 226.9 bits (577), Expect = 7.900e-56 Identity = 102/166 (61.45%), Postives = 127/166 (76.51%), Query Frame = 0 Query: 48 EEGMVSILGIGGKSVRTSQSKGRRRQPAEIRIQKDLAEVELGTAATLTFPNPNDLTDFLVEIMPESGFWTGARFKFSFRFPAEYPHTPPKVICQTRILHPNIDWEGNVCLNILREEWKPILDVNAIIYGLLHLFAEPNPDDPLNKEAAELFRADIRQFERIVKQTL 214 E+ VSILGIGGK + +R+ P EIRIQKD+AE++ G A + FPN NDLT F V + P++GFW GA + F+F PA YPH PPKV C T+I HPNI+ EGNVCLNILR++WKP+LD+NA+IYGL++LF EPNPDDPLNKEAA L+R DI+ FER V +TL Sbjct: 32 EKEKVSILGIGGKKMSKGTGSKKRKTPGEIRIQKDIAELDGGDVAVINFPNANDLTKFHVVVTPDTGFWKGATYHFTFSIPAMYPHEPPKVHCDTKIFHPNINLEGNVCLNILRQDWKPVLDINAVIYGLIYLFYEPNPDDPLNKEAAALYRDDIKMFERHVARTL 197
BLAST of NO02G04000 vs. NCBI_GenBank
Match: GAX17770.1 (ubiquitin-conjugating enzyme E2 M [Fistulifera solaris]) HSP 1 Score: 226.5 bits (576), Expect = 1.000e-55 Identity = 103/176 (58.52%), Postives = 134/176 (76.14%), Query Frame = 0 Query: 46 ATEEGMVSILGIGGKS-VRTSQS--KGRRRQPAEIRIQKDLAEVELGTAATLTFPNPNDLTDFLVEIMPESGFWTGARFKFSFRFPAEYPHTPPKVICQTRILHPNIDWEGNVCLNILREEWKPILDVNAIIYGLLHLFAEPNPDDPLNKEAAELFRADIRQFERIVKQTLRGSVI 219 A + VS+LGIGGK V+ ++ G++R P EIRIQ D+AE++ G AT+ FPNPNDLT F V + P++G W GA + F+F P YPH+PP+V C T+I HPNID +G VCLNILRE+WKP+LD+N++IYGL++LF EPNPDDPLN EAAELFR D QFER+V +TLRG ++ Sbjct: 33 ADQPQKVSLLGIGGKKMVKNGETGKTGKKRTPGEIRIQTDIAELDGGDVATIKFPNPNDLTLFDVSVTPDTGLWKGATYHFTFTIPPHYPHSPPRVECNTKIYHPNIDLQGKVCLNILREDWKPVLDINSVIYGLIYLFYEPNPDDPLNHEAAELFRKDKTQFERLVMRTLRGGIL 208
BLAST of NO02G04000 vs. NCBI_GenBank
Match: OQS07051.1 (hypothetical protein THRCLA_00941 [Thraustotheca clavata]) HSP 1 Score: 225.7 bits (574), Expect = 1.800e-55 Identity = 101/167 (60.48%), Postives = 135/167 (80.84%), Query Frame = 0 Query: 52 VSILGIGGKSVRTSQSKGRRRQPAEIRIQKDLAEVELGTAATLTFPNPNDLTDFLVEIMPESGFWTGARFKFSFRFPAEYPHTPPKVICQTRILHPNIDWEGNVCLNILREEWKPILDVNAIIYGLLHLFAEPNPDDPLNKEAAELFRADIRQFERIVKQTLRGSVI 219 VSI GI G+ RT++ K ++R P EIRIQKD+AE++ G+AA ++FP+PNDLT F V++ ++G WTGA + F+F+ PA YPH PPKV C T+I HPNID EG+VCLNILR++WKP+LD+NA+IYGL++LF EPNPDDPLNKEAAE+FR D +F+ +V ++LRG I Sbjct: 39 VSIFGI-GRGKRTAKPKEKKRTPGEIRIQKDIAELDGGSAAVVSFPDPNDLTTFDVKVAVDTGLWTGATYHFTFKIPALYPHEPPKVRCNTKIYHPNIDLEGHVCLNILRDDWKPVLDINAVIYGLIYLFYEPNPDDPLNKEAAEIFRNDPNRFKDLVSRSLRGQTI 204
BLAST of NO02G04000 vs. NCBI_GenBank
Match: CCI41435.1 (unnamed protein product [Albugo candida]) HSP 1 Score: 221.9 bits (564), Expect = 2.600e-54 Identity = 102/164 (62.20%), Postives = 130/164 (79.27%), Query Frame = 0 Query: 52 VSILGIGGKSVRTSQSKGRRRQPAEIRIQKDLAEVELGTAATLTFPNPNDLTDFLVEIMPESGFWTGARFKFSFRFPAEYPHTPPKVICQTRILHPNIDWEGNVCLNILREEWKPILDVNAIIYGLLHLFAEPNPDDPLNKEAAELFRADIRQFERIVKQTLRG 216 V ILG+ G+ R SK ++R P EIRIQKD+AE++ G AA +TFP+ NDLT F V+I ++G+W GA + FSFR P YPH PPKV C T+I HPNID +GNVCLNILRE+WKP+LD+N++IYGL++LF EPN DDPLN+EAAELFR++ +F RIVK+TLRG Sbjct: 37 VRILGV-GRGKRIGGSKEKKRTPGEIRIQKDIAELDGGDAANVTFPDTNDLTVFNVKIKVDNGYWKGAAYNFSFRIPPMYPHEPPKVRCHTKIYHPNIDLDGNVCLNILREDWKPVLDINSVIYGLIYLFYEPNSDDPLNREAAELFRSNPSEFARIVKRTLRG 199
BLAST of NO02G04000 vs. NCBI_GenBank
Match: XP_008876548.1 (hypothetical protein H310_11600 [Aphanomyces invadans] >ETV94957.1 hypothetical protein H310_11600 [Aphanomyces invadans]) HSP 1 Score: 221.5 bits (563), Expect = 3.300e-54 Identity = 98/169 (57.99%), Postives = 135/169 (79.88%), Query Frame = 0 Query: 50 GMVSILGIGGKSVRTSQSKGRRRQPAEIRIQKDLAEVELGTAATLTFPNPNDLTDFLVEIMPESGFWTGARFKFSFRFPAEYPHTPPKVICQTRILHPNIDWEGNVCLNILREEWKPILDVNAIIYGLLHLFAEPNPDDPLNKEAAELFRADIRQFERIVKQTLRGSVI 219 G + I+G+G T +SK ++R P EIRIQKD+AE++ G+AA ++FP+ NDLT+F V I ++G WTGA + F+F+ P+ YPH PPKV C T+I HPNID +GNVCLNILRE+WKP+LD+NA+IYGL++LF EPNPDDPLN+EAAE+FR+D R+F+ +V ++LRG + Sbjct: 53 GGIKIMGLGR---GTRKSKEKKRTPGEIRIQKDIAELDGGSAAVVSFPDSNDLTNFHVRITVDTGLWTGAAYTFTFKIPSFYPHEPPKVRCMTKIYHPNIDLDGNVCLNILREDWKPVLDINAVIYGLIYLFYEPNPDDPLNREAAEMFRSDPRRFQDVVGRSLRGQYV 218 The following BLAST results are available for this feature:
BLAST of NO02G04000 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO02G04000 ID=NO02G04000|Name=NO02G04000|organism=Nannochloropsis oceanica|type=gene|length=1012bpback to top protein sequence of NO02G04000.1 >NO02G04000.1-protein ID=NO02G04000.1-protein|Name=NO02G04000.1|organism=Nannochloropsis oceanica|type=polypeptide|length=280bpback to top Synonyms
Publications
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