NO02G03880, NO02G03880 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO02G03880 vs. NCBI_GenBank
Match: EWM30215.1 (pentatricopeptide repeat-containing protein [Nannochloropsis gaditana]) HSP 1 Score: 1387.9 bits (3591), Expect = 0.000e+0 Identity = 719/1081 (66.51%), Postives = 820/1081 (75.86%), Query Frame = 0 Query: 126 PTPSAVVDYGEEA-GASLPPPVTALVDSKQELFDALQSHTGRREAFEGLWNSDFEFTEAEYQELLKACFRLGYVNPFKDLVDEVQRLGVPVAPETWTACIYIASSRDFFRLGIACLEKMVECGTIPDGKAFNQVMACCEKKGRGEEAMHLFNFMRGHGIEAPPLTYWALASLLSCEGRWDDFKIVEENLRARDFPESIKERFYSTAVVARSGARDWQGALDMLRRMHECGAVPSIRGFTTALSTCMAAGAYQAVRDFVEEVRGWAIFDFDVATYNVVINSYASERNLEGASTWFEKIYEAGLRPSLISYSTIFKVCTSVKRGDLAKEYLERLVSEGDVHPNLITLNHAIQALAISRSHVEDARELLETMRDRFGVVPNATAYTFLLRAAGEKGDARLAMELYHRMKRVDGLVPEPRTIWEATIACTKSRFFAPMEELADDLMALSADSPEGEDVXXXXXXXXXXXXXXXXXDLKYMGREGGRREGQAQG-------QGGYDSVRSLLYAYNAVLTALEKNGDGKLALRVYAHMQAQGLHADPMAIARLLEALNKGKMPERGLKIWSELEGRRAEVRENVNITNAVLNAMSSVDPLTAVEFFQDLREKGQVDDRSYTFAFAAYDNLGDVTGVRRLWSEMRTLGLAFDRVSYGSLLRALANAGEIDQAMDGLRRSEEVGVPLNNYTVALTLIGCKRSRRWSTALSMLRELRDEKGLILNVVCYNSVLTVCNAAGQWRACLKLLDEMKEHDISPDYTSLRVTLNALASAGRNNEIVRLYRLHEQEGGVLSRKLDNFAFRLVANAFIKFDPVEAVGMIQSYLTTFEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLIDSRLYKTLITALGHKGEWSQALDVLKSLPPPLRDISTVSAAVSALLRSEQYIRARDLVVEAEESSRSSKNMRFDSVADSLGLQAAYMAKDFPQAQIYLDRLSKEGSHANSSVNFGFCLLAKQGKWLELVSLLSEIVKIQQQGGKEGRGEGGRKFVVSRTTLETFANLTS-----------XXXXXXXXXXXXXXXPEPAVLTQIVEMLSKM 1188 P S + G +A G + + A+ SK +LF+ LQSH R+EAFE LWNSDFEF+E+EYQ+LLKACFRLGYVNPF DLVDE+QRL VP+A ETWTACIYIASS+DFFRLGIACL++MV G PD KA NQVMACCEKKGRGEEAM LF FMR HG+E PPLTYWALASLLSC GRW+DFKIVEE+LR RDFPESIKERFYSTAVVARSGARDW+G+LDMLRRM ECGAVPSIRGFTTALSTCMAAGAYQAVRDFVEEV+GWAIFD DVATYNVVINSYASER+LEGA WFEKIYEAGLRPSLISYSTIFKVC S KRGDLA +L+RLV E D+ P+L+TLNHA+QAL S+ H +DAR LLETM RFGV PNA+ YT LLRAA EKGDARLA+ELYHRMK V L PEPR+IWE T+ACTKSRFF P+EEL DDLMALS G+ L GG EG G YD RSLLYAY+A+++ LEK G+G+LALR++AHMQAQGL AD I RLLEALNKG+MPER LKIWS+LEGRR +VR NVN+TNAVL+AM++VDPL AVEFF D+R++ QVDDRSYT+AF AYDNLGD+TGV+RLW EMR GL FDRVSYGSLLRALA+AGE+ QAM+GLR SE VGVPLNNYT+ALTLIGCKR+R+WSTALSMLRELRDE+GL LNVVCYNSVLTVCNAAGQWRACL+LL+EM EH + DYTSLRVTLNALASAGR NE+V LYR HE+ GVL+RKLD FAFRL+ANAFIK DPV AV MI+ ++ F L+DSRLYK+LITALGHKGEW QA+ VL++L PPLRDIST+SA SALLRSEQY RARDL++EAEE+ + +FD VADSLGLQAAYMA+D+ QA +YLDRL + G+H NSS NFGFCLLAKQGKW EL +LL +I ++Q+ E GR+++VSRTTLETFANLTS EPAVL I+E + KM Sbjct: 143 PFGSTCLRVGLQAQGTEVSRDIIAVARSKADLFEDLQSHARRKEAFETLWNSDFEFSESEYQDLLKACFRLGYVNPFNDLVDEIQRLNVPIALETWTACIYIASSQDFFRLGIACLKRMVHWGVRPDSKAINQVMACCEKKGRGEEAMRLFLFMRDHGVEVPPLTYWALASLLSCGGRWEDFKIVEEDLRKRDFPESIKERFYSTAVVARSGARDWKGSLDMLRRMRECGAVPSIRGFTTALSTCMAAGAYQAVRDFVEEVQGWAIFDLDVATYNVVINSYASERDLEGALAWFEKIYEAGLRPSLISYSTIFKVCASTKRGDLALTFLDRLVREEDLQPSLVTLNHALQALTASQEHFDDARRLLETMEARFGVAPNASTYTSLLRAASEKGDARLALELYHRMKDVAVLAPEPRSIWEVTVACTKSRFFEPLEELVDDLMALSEKVLAGD---RQDHVGPAGGAVASVPALPGTSEGGGSGEGALGGGVPPPNSSRKYDPTRSLLYAYSALMSGLEKAGEGELALRLHAHMQAQGLEADTATIVRLLEALNKGRMPERSLKIWSDLEGRREDVRRNVNVTNAVLSAMAAVDPLAAVEFFHDMRDRDQVDDRSYTYAFTAYDNLGDITGVQRLWEEMRVRGLTFDRVSYGSLLRALAHAGEVKQAMEGLRHSENVGVPLNNYTIALTLIGCKRTRQWSTALSMLRELRDERGLSLNVVCYNSVLTVCNAAGQWRACLRLLEEMGEHQVEIDYTSLRVTLNALASAGRYNEVVSLYRRHEELDGVLARKLDTFAFRLIANAFIKVDPVAAVSMIKKHVQRFS--GGAVRSGAGDVPVGSSQPGRHQYHRSSAGSPARQFRRGQEQSTALVDSRLYKSLITALGHKGEWEQAVQVLQALEPPLRDISTISATASALLRSEQYSRARDLLLEAEETVPGA---QFDGVADSLGLQAAYMAEDYAQAGLYLDRLIQAGNHGNSSANFGFCLLAKQGKWQELSTLLLDISRLQE--------EHGRRYIVSRTTLETFANLTSWTLDSEAPGGMVKSLNAEGSEGEMEHVEPAVLANIMETVCKM 1207
BLAST of NO02G03880 vs. NCBI_GenBank
Match: XP_005856229.1 (pentatricopeptide repeat-containing protein, partial [Nannochloropsis gaditana CCMP526] >EKU20126.1 pentatricopeptide repeat-containing protein, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 718.8 bits (1854), Expect = 2.900e-203 Identity = 364/521 (69.87%), Postives = 406/521 (77.93%), Query Frame = 0 Query: 126 PTPSAVVDYGEEA-GASLPPPVTALVDSKQELFDALQSHTGRREAFEGLWNSDFEFTEAEYQELLKACFRLGYVNPFKDLVDEVQRLGVPVAPETWTACIYIASSRDFFRLGIACLEKMVECGTIPDGKAFNQVMACCEKKGRGEEAMHLFNFMRGHGIEAPPLTYWALASLLSCEGRWDDFKIVEENLRARDFPESIKERFYSTAVVARSGARDWQGALDMLRRMHECGAVPSIRGFTTALSTCMAAGAYQAVRDFVEEVRGWAIFDFDVATYNVVINSYASERNLEGASTWFEKIYEAGLRPSLISYSTIFKVCTSVKRGDLAKEYLERLVSEGDVHPNLITLNHAIQALAISRSHVEDARELLETMRDRFGVVPNATAYTFLLRAAGEKGDARLAMELYHRMKRVDGLVPEPRTIWEATIACTKSRFFAPMEELADDLMALSADSPEGEDVXXXXXXXXXXXXXXXXXDLKYMGREGGRREGQAQG-------QGGYDSVRSLLYAYNAVLTALEKNG 639 P S + G +A G + + A+ SK +LF+ LQSH R+EAFE LWNSDFEF+++EYQ+LLKACFRLGYVNPF DLVDE+QRL VP+A ETWTACIYIASS+DFFRLGIACL++MV G PD KA NQVMACCEKKGRGEEAM LF FMR HG+E PPLTYWALASLLSC GRW+DFKIVEE+LR RDFPESIKERFYSTAVVARSGARDW+G+LDMLRRM ECGAVPSIRGFTTALSTCMAAGAYQAVRDFVEEV+GWAIFD DVATYNVVINSYASER+LEGA WFEKIYEAGLRPSLISYSTIFKVC S KRGDLA +L+RLV E D+ P+L+TLNHA+QAL S+ H +DAR LLETM RFGV PNA+ YT LLRAA EKGDARLA+ELYHRMK V L PEPR+IWE T+ACTKSRFF P+EEL DDLMALS G+ L GG EG G YD RSLLYAY+A+++ LEK G Sbjct: 100 PFGSTCLRVGLQAQGTEVSRDIIAVARSKADLFEDLQSHARRKEAFETLWNSDFEFSKSEYQDLLKACFRLGYVNPFNDLVDEIQRLNVPIALETWTACIYIASSQDFFRLGIACLKRMVHWGVRPDSKAINQVMACCEKKGRGEEAMRLFLFMRDHGVEVPPLTYWALASLLSCGGRWEDFKIVEEDLRKRDFPESIKERFYSTAVVARSGARDWKGSLDMLRRMRECGAVPSIRGFTTALSTCMAAGAYQAVRDFVEEVQGWAIFDLDVATYNVVINSYASERDLEGALAWFEKIYEAGLRPSLISYSTIFKVCASTKRGDLALTFLDRLVREEDLQPSLVTLNHALQALTASQEHFDDARRLLETMEARFGVAPNASTYTSLLRAASEKGDARLALELYHRMKDVAVLAPEPRSIWEVTVACTKSRFFEPLEELVDDLMALSEKVLAGD---RQDHVGPAGGAVASVPALPGTSEGGGSGEGALGGGVPPPNSSRKYDPTRSLLYAYSALMSGLEKAG 617
BLAST of NO02G03880 vs. NCBI_GenBank
Match: XP_005856234.1 (hypothetical protein NGA_2104200, partial [Nannochloropsis gaditana CCMP526] >EKU20131.1 hypothetical protein NGA_2104200, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 679.1 bits (1751), Expect = 2.600e-191 Identity = 358/565 (63.36%), Postives = 418/565 (73.98%), Query Frame = 0 Query: 634 LEKNGDGKLALRVYAHMQAQGLHADPMAIARLLEALNKGKMPERGLKIWSELEGRRAEVRENVNITNAVLNAMSSVDPLTAVEFFQDLREKGQVDDRSYTFAFAAYDNLGDVTGVRRLWSEMRTLGLAFDRVSYGSLLRALANAGEIDQAMDGLRRSEEVGVPLNNYTVALTLIGCKRSRRWSTALSMLRELRDEKGLILNVVCYNSVLTVCNAAGQWRACLKLLDEMKEHDISPDYTSLRVTLNALASAGRNNEIVRLYRLHEQEGGVLSRKLDNFAFRLVANAFIKFDPVEAVGMIQSYLTTFEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLIDSRLYKTLITALGHKGEWSQALDVLKSLPPPLRDISTVSAAVSALLRSEQYIRARDLVVEAEESSRSSKNMRFDSVADSLGLQAAYMAKDFPQAQIYLDRLSKEGSHANSSVNFGFCLLAKQGKWLELVSLLSEIVKIQQQGGKEGRGEGGRKFVVSRTTLETFANLTS-----------XXXXXXXXXXXXXXXPEPAVLTQIVEMLSKM 1188 LEK G+G+LALR++AHMQAQGL AD I RLLEALNKG+MPER LKIWS+LEGRR +VR NVN+TNAVL+AM++VDPL AVEFF D+R++ QVDDRSYT+AF AYDNLGD+TGV+RLW EMR GL FDRVSYGSLLRALA+AGE+ QAM+GLR SE VGVPLNNYT+ALTLIGCKR+R+WSTALSMLRELRDE+GL LNVVCYNSVLTVCNAAGQWRACL+LL+EM EH + DYTSLRVTLNALASAGR NE+V LYR HE+ GVL+RKLD FAFRL+ANAFIK DPV AV MI+ ++ F L+DSRLYK+LITALGHKGEW QA+ VL++L PPLRDIST+SA SALLRSEQY RARDL++EAEE+ + +FD VADSLGLQAAYMA+D+ QA +YLDRL + G+H NSS NFGFCLLAKQGKW EL +LL +I ++Q+ E GR+++VSRTTLETFANLTS EPAVL I+E + KM Sbjct: 2 LEKAGEGELALRLHAHMQAQGLEADTATIVRLLEALNKGRMPERSLKIWSDLEGRREDVRRNVNVTNAVLSAMAAVDPLAAVEFFHDMRDRDQVDDRSYTYAFTAYDNLGDITGVQRLWEEMRVRGLTFDRVSYGSLLRALAHAGEVKQAMEGLRHSENVGVPLNNYTIALTLIGCKRTRQWSTALSMLRELRDERGLSLNVVCYNSVLTVCNAAGQWRACLRLLEEMGEHQVEIDYTSLRVTLNALASAGRYNEVVSLYRRHEELDGVLARKLDTFAFRLIANAFIKVDPVAAVSMIKKHVQRFS--GGAVRSGAGDVPVGSSQPGRHQYHRSSAGSPARQFRRGQEQSTALVDSRLYKSLITALGHKGEWEQAVQVLQALEPPLRDISTISATASALLRSEQYSRARDLLLEAEETVPGA---QFDGVADSLGLQAAYMAEDYAQAGLYLDRLIQAGNHGNSSANFGFCLLAKQGKWQELSTLLLDISRLQE--------EHGRRYIVSRTTLETFANLTSWTLDSEAPGGMVKSLNAEGSEGEMEHVEPAVLANIMETVCKM 553
BLAST of NO02G03880 vs. NCBI_GenBank
Match: XP_010905005.1 (PREDICTED: pentatricopeptide repeat-containing protein At4g13650 [Elaeis guineensis] >XP_010905006.1 PREDICTED: pentatricopeptide repeat-containing protein At4g13650 [Elaeis guineensis] >XP_010905007.1 PREDICTED: pentatricopeptide repeat-containing protein At4g13650 [Elaeis guineensis] >XP_010905008.1 PREDICTED: pentatricopeptide repeat-containing protein At4g13650 [Elaeis guineensis] >XP_019701799.1 PREDICTED: pentatricopeptide repeat-containing protein At4g13650 [Elaeis guineensis]) HSP 1 Score: 103.2 bits (256), Expect = 5.800e-18 Identity = 134/650 (20.62%), Postives = 264/650 (40.62%), Query Frame = 0 Query: 264 KKGRGEEAMHLFNFMRGHGIEAPPLTYWALASLLSCEGRWDDFKIVEENLRARDFPESIKERFYSTAVVARSGARDWQGALDMLRRMHECGAVPSIRGFTTALSTCMAAGAYQAVRDFVEEVRGWAIFDFDVATYNVVINSYASERNLEGASTWFEKIYEAGLRPSLISYSTIFKVCTSVKRGDLAK-EYLERLVSEGDVHPNLITLNHAIQALAISRSHVEDARELLETMRDRFGVVPNATAYTFLLRAAGEKGDARLAMELYHRMKRVDGLVPEPRTIWEATIACTKSRFFAPMEELADDLMALSADSPEGEDVXXXXXXXXXXXXXXXXXDLKYMGREGGRREGQAQGQGGYDSVRSLLYAYNAVLTALEKNGDGKLALRVYAHMQAQGLHADPMAIARLLEALNKGKMPERGLKIWSE--LEGRRAEVRENVNITNAVLNAMSSVDPL-TAVEFFQDLREKGQVDDRSYTFAFAAYDNLGDVTGVRRLWSEMRTLGLAFDRVSYGSLLRALANAGEIDQAMDGLRRSEEVG----VPLNNYTVALTLIGCKRSRRWSTALSMLRELRDEKGLILNVVCYNSVLTVCNAAGQWRACLKLLDEMKEHDISPDYTSLRVTLNALASAGRNNEIVRLYRLHEQEGGVLSR 906 + G GEEA+HL++ M GI P + L+S+LS + D+F+ ++ + IK+ F S V + T S C G+ + + ++ D TYN +I+ +A N E A F+++ +G +P ++ +++ C S+ GD+ K + L V + + I + ++ L + + +E A E T DR N + +L A G+ G+ + +L++ M +V+G+ P T CT + +L + + L+ + +V + + ++ + ++ A++ ++ ALR + MQ G+ D + +A + A K E+GL+I ++ + G + +++ NA++N + + A F+ + K D+ S+ + + G +++ +M G+ + ++GS++ A AN +I Q R + G + +NN V+L C + E N V +N+++T C+ G R LKL ++MK+ D+ P+Y + L A + G NE + + +E G++ R Sbjct: 290 QNGLGEEALHLYSQMHRSGIIPTP---YVLSSVLSACTKTDNFEHGKQ-----IHAQVIKQGFSSETFVGNA--------------------------LVTLYSRC---GSLRRAEEIFSDMP-----HHDGVTYNTLISGHAQNGNSENAIEIFKEMQLSGFKPDSVTIASLLTACASI--GDIRKGKQLHSYVFKSGLSSEYI-IEGSLLDLYVKCAAIETAHEFFNT-TDR----ENVVLWNVMLVAYGQMGNLGKSFDLFYEM-QVEGVQPNQFTYPSILRTCT----YVGALDLGEQIHTLTIKTGFELNVYVSSVLIDMYSKCGQLKSARAILERITEKD---------------VVSWTAMIAGYAQHELYVEALRTFEEMQIHGIQPDNIGLASAISACAGIKAIEQGLQIHAQACISGYSTD----ISVGNALINLYAKCGRIEEAYSAFETVEVK---DEISWNGLISGFAQSGHCEEALKVFVQMDRAGVKSNSFTFGSVVSASANMADIKQGKQIHARIIKTGYDSEIEVNNALVSL-YAKCGSIEDAKMGFFGMSE--------RNEVSWNAMITGCSQHGCGREALKLFEKMKQEDLKPNYVTFIGVLAACSHVGLVNEGLDYFYSMSEEHGIVPR 853
BLAST of NO02G03880 vs. NCBI_GenBank
Match: XP_009420355.1 (PREDICTED: pentatricopeptide repeat-containing protein At3g09650, chloroplastic [Musa acuminata subsp. malaccensis]) HSP 1 Score: 91.3 bits (225), Expect = 2.300e-14 Identity = 127/568 (22.36%), Postives = 233/568 (41.02%), Query Frame = 0 Query: 333 ARSGARDWQGALDMLRRMHECGAVPSIRGFTTALSTCMAA----GAYQAVRDF---VEEVRGWAIFDF---DVATYNVVINSYASERNLEGASTWFEKIYEAGLRPSLISYSTIFKVCTSVKRGDLAKEYLERLVSEGDVHPNLITLNHAIQALAISRSHVEDARELLETMR----DRFGVVPNATAYTFLLRAAGEKGDARLAMELYHRMKRVDGLVPEPRTIWEATIACTKSRFFAPMEELADDLMALSADSPEGEDVXXXXXXXXXXXXXXXXXDLKYMGREGGRREGQAQGQGGYDSVRSLLYAYNAVLTALEKNGDGKLALRVYAHMQAQGLHADPMAIARLLEALNKGKMPERGLKIWSELEGRRAEVRENVNITNAVLNAMSSVDPLTAVEFFQDLREKGQVDDR-SYTFAFAAYDNLGDVTGVRRLWSEM-RTLGLAFDRVSYGSLLRALANAGEIDQAMDGLRRSEEVGVPLNNYTVALTLIGCKRSRRWSTALSMLRE----------LRDEKGLILNVVCYNSVLTVCNAAGQWRACLKLLDEMKEHDISPDYTSLR 875 ARSGA + AL +LR M G +P ++ ++ +S A+ G +A+R F + VR A+ DVA +N +N+ A+ ++ + F+++ E G+ P +++++ + K+C +R DL LERL++ G V P + TL H++ A + + A +L++ MR D ++ + T + R E + +Y + G EP + +A + P + LM EDV R + +A D V Y V++AL K G A V A M G+ A+ + LL+ + + ++ ++ + D A+ +F ++RE+G + SYT A+ G +++ EM + + DRV+Y L+ G I++A + + ++ G + T G +R+ AL + E LR ++GL+ +++ VC A +R L+++ M+E+ ISP+ T + Sbjct: 138 ARSGATSY--ALAVLRTMLRSGYLPHVKAWSAVVSRLSASPDDGGPGEALRLFDSVLRRVRRVAVSTDARPDVAAFNAALNACANLGDVRRFAQLFDEMPEFGVEPDVLTHNVLIKMCARAERKDLLIFVLERLITSGLV-PCITTL-HSLVAAYVGLDDLVTAEKLVQAMREGRQDLCLILRQSNDGTSIDRIDEEAHALLEKLVMYRHLTECHGNGNEPPLLPKA---------YFPDSRMYTTLMKGYVKEGRVEDVI----------------------RMTRAMQLEADPASHPDHV-----TYTTVISALIKVGAMDRARSVLADMGNAGVPANRVTYNVLLKGYCQQLQLDEAKELVRDMSKHXXXXXXXXXXXXXXXGCILVDDSAGALAYFNEMRERGITPSKVSYTTLMKAFALSGQPKLAHKVFDEMEKDPRVKVDRVAYNMLIEGYCRLGLIEEAKKIVEKMKQNGFQPDVATYGSLANGIALARKPGEALLLWNEVKERCAASPPLRPDEGLL------DALADVCVRAAFFRKALEIVACMEENGISPNKTKYK 659
BLAST of NO02G03880 vs. NCBI_GenBank
Match: XP_021653376.1 (pentatricopeptide repeat-containing protein At5g27110-like [Hevea brasiliensis]) HSP 1 Score: 90.9 bits (224), Expect = 3.000e-14 Identity = 108/516 (20.93%), Postives = 221/516 (42.83%), Query Frame = 0 Query: 394 DVATYNVVINSYASERNLEGASTWFEKIYEAGLRPSLISYSTIFKVCTSVKRGDLAKEYLERLVSEGDVHPNLITLNHAIQALAISRSHVEDARELLETMRDRFGVVPNATAYTFLLRAAGEKGDARLAMELYHRMKRVDGLVPEPRTIWEATIACTKSRFFAPMEELADDLMALSADSPEGEDVXXXXXXXXXXXXXXXXXDLKYMGREGGRREGQAQGQGGYDSV--RSLLYAYNAVLTALEKNGDGKLALRVYAHMQAQGLHADPMAIARLLEALNKGKMPERGLKIWSELEGRRAEVRENVNITNAVLNAMSSVDPL-TAVEFFQDLREKGQVDDRSYTFAFAAYDNLGDVTGVRRLWSEMRTLGLAFDRVSYGSLLRALANAGEIDQA---MDGLRRSEEVGVPLNNYTVALTLIG-CKRSRRWSTALSMLRELRDEKGLILNVVCYNSVLTVCNAAGQWRACLKLLDEMKEHDISPDYTSLRVTLNALASAGRNNEIVRLYRLHEQEGGV 903 DVA++N VI+ Y + + A F+K+ E+G P+L++ +T+ C + + KE ++ G V + + A+ L ++ A+++ E M + A+ ++ GD+R +EL+ RM ++G P T+ +AC+++ L ++ S ++ DL + + G+ Q + R+ + +N +++ G+ AL +Y M+ G+ D + + +L A ++ E+G +I + + R E N + A+L+ + + A F L E+ V S+T AY + G RL+ EM+ D V++ +L A ++AG +D+ + + + + +Y+ + L+G R R L RE+ ++ GL+ +++ + C+ ++ + + D PD S +TL+ + + +N ++VR RL +E G+ Sbjct: 171 DVASWNTVISCYYQYGDAKKALELFDKMRESGFEPNLVTLTTVISSCARLLDLERGKEIHREMMKSGKVLDGFV--SSALVDLYGKCGCLDIAKDIFEQMPKK-----TLVAWNSMISGYSSVGDSRECIELFKRM-NIEGTKPTLTTLSSILMACSRAAQLRHGRFLHGYVIRNSIEA--------------DIFVNSGLIDLYF-------KCGRVQSAENVFEMLPRANVVCWNVMISGYVTVGNYFEALNMYDDMKVAGVKPDAVTFSSVLSACSQLAALEKGKEIHNCISERGLE--SNEIVMGALLDMYAKCGAVDEAYNVFNKLPERDLV---SWTSMITAYGSHGQALEALRLFGEMQQSNAKPDAVTFLEVLSACSHAGLVDKGYYYFNLMTDKYGINPRIEHYSCLIDLLGRAGRLREAYNILHNTREITEDVGLL------STLFSACHLHRDLELGEEIAKLLLKKD--PDDPSTYITLSNMYAFVKNWDMVRRVRLRMKELGL 644
BLAST of NO02G03880 vs. NCBI_GenBank
Match: OWM69147.1 (hypothetical protein CDL15_Pgr025334 [Punica granatum]) HSP 1 Score: 89.7 bits (221), Expect = 6.700e-14 Identity = 94/429 (21.91%), Postives = 180/429 (41.96%), Query Frame = 0 Query: 185 YQELLKACFRLGYVNPFKDLVDEVQRLGVPVAPETWTACIYIASSRDFFRLGIACLEKMVECGTIPDGKAFNQVMACCEKKGRGEEAMHLFNFMRGHGIEAPPLTYWALAS-----------------LLSCEGRWDDF---KIVE------ENLRARDFPESIKER---FYSTAVVARSGARDWQGALDMLRRMHECGAVPSIRGFTTALSTCMAAGAYQAVRDFVEEVRGW--------------AIFDF--------------------DVATYNVVINSYASERNLEGASTWFEKIYEAGLRPSLISYSTIFKVCTSVKRGDLAKEYLERLVSEGDVHPNLITLNHAIQALAISRSHVEDARELLETMRDRFGVVPNATAYTFLLRAAGEKGDARLAMELYHRMKRVDGLVPEPRTIWEATIACT 551 Y +LKAC LG V + ++ + G ++ + + ++ FR + ++M E D +N VM+CC + GR E+A+ LF M+G G++ +T+ S L+ C D F +V+ E +A++ E + E+ ++ + S D + +L+RM+ G PS+ LS+ + A + A + + G+ ++ DF DV ++NV+I+ YAS N A F+++ G RP I++++I VC+ + + KE + + E N I + ++ A V +A ++ E ++ + + ++T ++ A G G AR ++ L+ +M R + + P+ T AC+ Sbjct: 111 YPNVLKACGELGRVGNGEAFHAQLVKAGCLSDVVIGSSAVSMYANCRRFRDAVRVFDEMGE----RDAACWNTVMSCCYQSGRPEKALELFERMKGSGVKPSLVTFTTAISSCSRLLDLERGKEIHGELVKCGLPLDGFVGSALVDMYGKCGELEKAKEIFEQMPEKTVISWNAMISGFSLIGDSSLCIGLLKRMNGEGIKPSL----ATLSSILTAASRSAQLQDGKFIHGYIIRNGVALDLFLDCSLIDFYFKCGRVASAENVFRKSGRMDVNSWNVMISGYASVGNYFEALEIFDEMKRVGGRPDAITFTSILSVCSQLASLEKGKE-IHETIKESRFETNGIVMGALLEMYA-KCGAVNEAHQVFERLQ-----IKDLMSWTSMIAAYGSHGRARESLNLFAKM-RAENIEPDKVTFLAVLSACS 523
BLAST of NO02G03880 vs. NCBI_GenBank
Match: XP_021653412.1 (pentatricopeptide repeat-containing protein At5g27110-like [Hevea brasiliensis]) HSP 1 Score: 89.7 bits (221), Expect = 6.700e-14 Identity = 108/516 (20.93%), Postives = 220/516 (42.64%), Query Frame = 0 Query: 394 DVATYNVVINSYASERNLEGASTWFEKIYEAGLRPSLISYSTIFKVCTSVKRGDLAKEYLERLVSEGDVHPNLITLNHAIQALAISRSHVEDARELLETMRDRFGVVPNATAYTFLLRAAGEKGDARLAMELYHRMKRVDGLVPEPRTIWEATIACTKSRFFAPMEELADDLMALSADSPEGEDVXXXXXXXXXXXXXXXXXDLKYMGREGGRREGQAQGQGGYDSV--RSLLYAYNAVLTALEKNGDGKLALRVYAHMQAQGLHADPMAIARLLEALNKGKMPERGLKIWSELEGRRAEVRENVNITNAVLNAMSSVDPL-TAVEFFQDLREKGQVDDRSYTFAFAAYDNLGDVTGVRRLWSEMRTLGLAFDRVSYGSLLRALANAGEIDQA---MDGLRRSEEVGVPLNNYTVALTLIG-CKRSRRWSTALSMLRELRDEKGLILNVVCYNSVLTVCNAAGQWRACLKLLDEMKEHDISPDYTSLRVTLNALASAGRNNEIVRLYRLHEQEGGV 903 DVA++N VI+ Y + + A F+K+ E+G P+L++ +T+ C + + KE ++ G V + + A+ L ++ A+++ E M + A+ ++ GD+R +EL+ RM ++G P T+ +AC+++ L ++ S ++ DL + + G+ Q + R+ + +N +++ G+ AL +Y M+ G+ D + + +L A ++ E+G +I + + R E N + A+L+ + + A F L E+ V S+T AY + G RL+ EM+ D V++ +L A ++AG +D+ + + + + +Y+ + L+G R R L RE+ ++ GL+ +++ + C ++ + + D PD S +TL+ + + +N ++VR RL +E G+ Sbjct: 171 DVASWNTVISCYYQYGDAKKALELFDKMRESGFEPNLVTLTTVISSCARLLDLERGKEIHREMMKSGKVLDGFV--SSALVDLYGKCGCLDIAKDIFEQMPKK-----TLVAWNSMISGYSSVGDSRECIELFKRM-NIEGTKPTLTTLSSILMACSRAAQLRHGRFLHGYVIRNSIEA--------------DIFVNSGLIDLYF-------KCGRVQSAENVFEMLPRANVVCWNVMISGYVTVGNYFEALNMYDDMKVAGVKPDAVTFSSVLSACSQLAALEKGKEIHNCISERGLE--SNEIVMGALLDMYAKCGAVDEAYNVFNKLPERDLV---SWTSMITAYGSHGQALEALRLFGEMQQSNAKPDAVTFLEVLSACSHAGLVDKGYYYFNLMTDKYGINPRIEHYSCLIDLLGRAGRLREAYNILHNTREITEDVGLL------STLFSACYLHRDLELGEEIAKLLLKKD--PDDPSTYITLSNMYAFVKNWDMVRRVRLRMKELGL 644
BLAST of NO02G03880 vs. NCBI_GenBank
Match: XP_024518767.1 (pentatricopeptide repeat-containing protein At2g13600-like isoform X2 [Selaginella moellendorffii]) HSP 1 Score: 89.0 bits (219), Expect = 1.100e-13 Identity = 146/727 (20.08%), Postives = 290/727 (39.89%), Query Frame = 0 Query: 168 EAFEGLWNSDFEFTEAEYQELLKACFRLGYVNPFKDLVDEVQRLGVPVAPETWTACIYIASSRDFFR---LGIACLEKMVECGTIPDGKAFNQVMA-----C-------CEKKGRGEEAMHLFNFMRGHGIEAPPLTYWALASLLSCEGRWDDFKIVEENLRARDFPESIKERFYSTAVVARSGARDWQGALDMLRRMHECGAVPSIRGFTTALSTCMAAGAYQAVRDFVEEVRGWAIFDFDVATYNVVINSYASERNLEGASTWFEKIYEAGLRPSLISYSTIFKVCTSV---KRGD-LAKEYLERLVSEGDVHPNLITLNH---------AIQALAISRSHVEDARELLETMRDRFGVVPNATAYTFLLRAAGEKGDARLAMELYHRMKRVDGLVPEPRTIWEATIAC------TKSRFFA---PMEELADDLMALSADSPEGEDVXXXXXXXXXXXXXXXXXDLKYMGREGGRREGQAQGQGGYD-SVRSLLYAYNAVLTALEKNGDGKLALRVYAHMQAQ-GLHADPMAIARLLEALNKGKMPERGLKIWSELEGRRAEVRENVNITNAVLNAMSSVDPLT-AVEFFQDLREKGQVDDRSYTFAFAAYDNLGDVTGVRRLWSEMRTLGLAFDRVSYGSLLRALANAGEIDQA---MDGLRRSEEVGVPLNNYTVALTLIGCKRSRRWSTALSMLRELRDEKGLILNVVCYNSVLTVCNAAGQW 852 E F + + E + LKAC L + P + + V +LG + +A A+ R F + + ++ +CG++ D + + MA C C + G E A+ +F M+ G TY A+ + + + ++ K+V ++ + ++ + A + + G ++ +CG++ A A++ E DV ++ ++ Y E A + FE + G P S+ CTS+ + GD LAK L D+H +L N A+ + + +++AR + E + R V+ N+ L+ G+A L EL+ +M R G P+ ++ A AC + + + E + +MAL +++ + + L + +D + + ++NA+++AL +N +G+LAL ++ MQ Q G D + L A + G +I +++ R + NV + N++++ ++ + + F+ + + V ++T A Y GD L+ EM+ G+ DR++Y S+L A ++AG +++ + +R ++ V +Y + L+G R+ A+ +L+ + NVV + + L C G+W Sbjct: 161 EMFSQMVSRGCEPNSRTFVAALKACATLASLEPGELVDGRVLKLG---SLRKGSAIHSQAAKRGFDKDIFVASTLVDMYCKCGSLADATSVFRGMARRDVVCWTSLILGCAENGEEELALEMFYSMQSEGCSPNSRTYVAVLAACAGVAQKEEAKLVAGQY-LKEVTLEVGKKIHLDATKGGFQSDTFVGN-SLIGMYAKCGSL---------------ADAHKVFDRMPER---------DVVSWTALMLGYVECGEAEVAFSLFESMVSGGCVPDGRSFVAALMACTSLAEQEEGDKLAKVKSGALKRGMDIH-SLAARNRWDADIFVATALVDMYANSGSMDNARTVFEKVLHRDVVLWNS-----LMLGYVRNGEAELVFELFTKM-RSQGCPPDSQSFVAALTACGNLAERDEGKHVSGKVVKVECLEKVMALHSEAGKTGKLGDMFVANTLVDVYAKCGSL-------------LDCRAAFDRMLHHDVVSWNALMSALVENSEGQLALDLFTSMQQQSGFLPDSRTVVAALSACGCVVALQTGKQIQADI--CRCGLENNVLVANSLVDFYGRCGRISVSQQLFEAVTDPRSVS--AWTSLIAGYSRQGDAQKTIELFEEMQRQGMKGDRITYLSVLAACSHAGLVEKGKTYFEAMRADRDITVDAVHYACMVDLLG--RANYLDEAIVVLK-----SNIPSNVVAWTAFLGAC---GKW 824
BLAST of NO02G03880 vs. NCBI_GenBank
Match: XP_024518766.1 (pentatricopeptide repeat-containing protein At4g39530-like isoform X1 [Selaginella moellendorffii]) HSP 1 Score: 89.0 bits (219), Expect = 1.100e-13 Identity = 146/727 (20.08%), Postives = 290/727 (39.89%), Query Frame = 0 Query: 168 EAFEGLWNSDFEFTEAEYQELLKACFRLGYVNPFKDLVDEVQRLGVPVAPETWTACIYIASSRDFFR---LGIACLEKMVECGTIPDGKAFNQVMA-----C-------CEKKGRGEEAMHLFNFMRGHGIEAPPLTYWALASLLSCEGRWDDFKIVEENLRARDFPESIKERFYSTAVVARSGARDWQGALDMLRRMHECGAVPSIRGFTTALSTCMAAGAYQAVRDFVEEVRGWAIFDFDVATYNVVINSYASERNLEGASTWFEKIYEAGLRPSLISYSTIFKVCTSV---KRGD-LAKEYLERLVSEGDVHPNLITLNH---------AIQALAISRSHVEDARELLETMRDRFGVVPNATAYTFLLRAAGEKGDARLAMELYHRMKRVDGLVPEPRTIWEATIAC------TKSRFFA---PMEELADDLMALSADSPEGEDVXXXXXXXXXXXXXXXXXDLKYMGREGGRREGQAQGQGGYD-SVRSLLYAYNAVLTALEKNGDGKLALRVYAHMQAQ-GLHADPMAIARLLEALNKGKMPERGLKIWSELEGRRAEVRENVNITNAVLNAMSSVDPLT-AVEFFQDLREKGQVDDRSYTFAFAAYDNLGDVTGVRRLWSEMRTLGLAFDRVSYGSLLRALANAGEIDQA---MDGLRRSEEVGVPLNNYTVALTLIGCKRSRRWSTALSMLRELRDEKGLILNVVCYNSVLTVCNAAGQW 852 E F + + E + LKAC L + P + + V +LG + +A A+ R F + + ++ +CG++ D + + MA C C + G E A+ +F M+ G TY A+ + + + ++ K+V ++ + ++ + A + + G ++ +CG++ A A++ E DV ++ ++ Y E A + FE + G P S+ CTS+ + GD LAK L D+H +L N A+ + + +++AR + E + R V+ N+ L+ G+A L EL+ +M R G P+ ++ A AC + + + E + +MAL +++ + + L + +D + + ++NA+++AL +N +G+LAL ++ MQ Q G D + L A + G +I +++ R + NV + N++++ ++ + + F+ + + V ++T A Y GD L+ EM+ G+ DR++Y S+L A ++AG +++ + +R ++ V +Y + L+G R+ A+ +L+ + NVV + + L C G+W Sbjct: 239 EMFSQMVSRGCEPNSRTFVAALKACATLASLEPGELVDGRVLKLG---SLRKGSAIHSQAAKRGFDKDIFVASTLVDMYCKCGSLADATSVFRGMARRDVVCWTSLILGCAENGEEELALEMFYSMQSEGCSPNSRTYVAVLAACAGVAQKEEAKLVAGQY-LKEVTLEVGKKIHLDATKGGFQSDTFVGN-SLIGMYAKCGSL---------------ADAHKVFDRMPER---------DVVSWTALMLGYVECGEAEVAFSLFESMVSGGCVPDGRSFVAALMACTSLAEQEEGDKLAKVKSGALKRGMDIH-SLAARNRWDADIFVATALVDMYANSGSMDNARTVFEKVLHRDVVLWNS-----LMLGYVRNGEAELVFELFTKM-RSQGCPPDSQSFVAALTACGNLAERDEGKHVSGKVVKVECLEKVMALHSEAGKTGKLGDMFVANTLVDVYAKCGSL-------------LDCRAAFDRMLHHDVVSWNALMSALVENSEGQLALDLFTSMQQQSGFLPDSRTVVAALSACGCVVALQTGKQIQADI--CRCGLENNVLVANSLVDFYGRCGRISVSQQLFEAVTDPRSVS--AWTSLIAGYSRQGDAQKTIELFEEMQRQGMKGDRITYLSVLAACSHAGLVEKGKTYFEAMRADRDITVDAVHYACMVDLLG--RANYLDEAIVVLK-----SNIPSNVVAWTAFLGAC---GKW 902 The following BLAST results are available for this feature:
BLAST of NO02G03880 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO02G03880 ID=NO02G03880|Name=NO02G03880|organism=Nannochloropsis oceanica|type=gene|length=4118bpback to top protein sequence of NO02G03880.1 >NO02G03880.1-protein ID=NO02G03880.1-protein|Name=NO02G03880.1|organism=Nannochloropsis oceanica|type=polypeptide|length=1229bpback to top Synonyms
Publications
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