NO02G03830, NO02G03830 (gene) Nannochloropsis oceanica

Overview
NameNO02G03830
Unique NameNO02G03830
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2146
Alignment locationchr2:1043482..1045627 -

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr2genomechr2:1043482..1045627 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO02G03830 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL016nonsL016Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR032ncniR032Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR000ngnoR000Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO02G03830.1NO02G03830.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO02G03830.1NO02G03830.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO02G03830 ID=NO02G03830|Name=NO02G03830|organism=Nannochloropsis oceanica|type=gene|length=2146bp
ATGAATTTACATCGCAAAACAAGCAAAgtaagtacgatcgatctgctgtt
gcgtcggagaacaaaacgtatgcgcgccaggcatctgggcattttacgca
agccatggtgcgcagtttagacgaccatgactccccttagagtctgattc
ccgagttttcaaacaccgcagaattcctgactctctcaatggcttccttt
ccccgggcctggaacactcctccttcactactaccctccacgattaatct
tttctgaggtcaaaagacgaaaaaagcgacacaggcgagcgaaataatta
tcgacttgacatttcactgtatgctgcctactgtcgtcaccatgataggg
ttcccgcccccaaaacgtgtattttcatgtacatatgataacacatattg
atactcttccctccctccttccctccctccctcccttctattatacataa
ttctccctcctccctccctccctcccttcgccccccccccttcctccctc
ccacccacccttcctccctctcgctacctcaccttccctccctccctccc
tctttccgtccttccagGTCTTCCTCCTCGAGCCCACATGCACGTTCCTC
CTCCATAAACTCCGAGCTATCGgtaatgtccgatacgcacacgaacggga
ttcattccccagctaccatcaccaccaccattaccacccagcagcaacaa
caacatcaacaggaacagtagcagcccggggatgaaggaagggaggaagg
gagggaggaagggagacgagatgccgtcattggagactcattcttccact
ccctcccactgccttttttttttcattatcccctctttttttacacactc
actctatttcacaacacattcgtccccttctcttttcgttctctccctta
caacatgactttgttttcctttctctacgcccacactgcctccctccctt
ctatccctccccctctcgcccctatcaaagagtcgaaataggcgatgaag
gaggtaactctaccacacccacatatggataatttaacaaacttcctacc
ggacagcggatatcccgagatttggcagtgtgtacatcgagatttggatc
gaagaaaattgggacgaaaagtcagtctcgaaccgcggcccaagggagtg
tgaatcgaaattttggacccaagaaagtgatgttgggacacaagtctcga
gaagggaaagggaaatacagtgagGCCGCGCCGACGAGGGGGAAGAGGAG
GAGGGGAGGGAGGAGGAGGAGGGGGAGGAGGAGGAGGGGGAGGAGGAGGG
GGAGGGGAAGGAGGAGGAGGAGGGGAAGGAGGAGGGGGAGGAGGAGGAGG
AGGGGGAGGAGAAGGCGGAGGCGGTGGAAGCAGAGGCGGAGGTGGAGGAG
GCGGAGGCGGAGGTTGCGGAGGAGGAGGCGGAGGCGGAGGAGGCGGAGGA
GGAGGCGGAGGCGGAGGAGGCGGAGGAGGAGGCGGAGGAGGAGGAGGGGG
TGGAGGCGGTGGAATTAGAGGAGAAGGAGGCGGAGGAGAACGAGGACGAG
GCGGAGGAGGACGAGGACGAGGCGGAGGAGGAGGTCATGGGCGGGCCTTC
CGAGGACTGTATTGGTGTGACACCTGTGAACAGTTCGTGTCTCGGGACGG
CAATGGGGCACGTAACATCCTGCGGGTGTACAGGAGTATGGTCCGCGGAG
AAGCTCGTCCCCATGATCTTCGGTTTGGTCAACCGCGGCAGGATATACGG
ACACTCTATGTGTAGCGTTCCCGCTGACCTCCTCTTTATCCTCCTTCCCC
CCCTCCTCCTGGCCCTGCGTGGGCCGTCCGGGGACTTTGCCTGGTCATAA
AACCTGTCAAAGTCGCTAGAAAAACTCGGACGAGAAATAAGGGATGACAA
CAATTTATTGTTGGAAAGCTTCCCCCTCGTATGCAAGTCCTCGAAGACGT
CAGGTTGCATGCGATAGTTCTAGAGAGATGTAGGAACTCAAAAGAACTAT
TGTCGACTGTAAAAAAAATAAAAAATCCTAGCGGTCGAGGTCTTCTCTCT
CACAACAAATAGAACGGGGGCAATGGAGATTGCGAAGCCTGCGATGCGAC
GACAGGTAGAATTTGGGTATCGAAAGCAAACACGAAAAATGCGGAA
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protein sequence of NO02G03830.1

>NO02G03830.1-protein ID=NO02G03830.1-protein|Name=NO02G03830.1|organism=Nannochloropsis oceanica|type=polypeptide|length=236bp
MNLHRKTSKVFLLEPTCTFLLHKLRAIGRADEGEEEEGREEEEGEEEEGE
EEGEGKEEEEGKEEGEEEEEGEEKAEAVEAEAEVEEAEAEVAEEEAEAEE
AEEEAEAEEAEEEAEEEEGVEAVELEEKEAEENEDEAEEDEDEAEEEVMG
GPSEDCIGVTPVNSSCLGTAMGHVTSCGCTGVWSAEKLVPMIFGLVNRGR
IYGHSMCSVPADLLFILLPPLLLALRGPSGDFAWS*
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Synonyms
Publications