NO02G03730, NO02G03730 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO02G03730 vs. NCBI_GenBank
Match: EWM30260.1 (tia1 cytotoxic granule-associated rna binding protein [Nannochloropsis gaditana]) HSP 1 Score: 412.1 bits (1058), Expect = 3.300e-111 Identity = 228/414 (55.07%), Postives = 272/414 (65.70%), Query Frame = 0 Query: 140 KETQVEPKEDSILFIGDLARGLTEADLVQAFECVGKVQMVDIKRDKLTMRNLGYGFVQMSTREEAAAAKKRMQDVEIQGRRIRVGWAQRNTALFIGDLDASTTIDDLHRAFGLFGPLYEDQTYLRQGKYGKYGSCKFAQRQDAETARREMHGRILGAGTYPIRVVWHHPQTXXXXXXXXXXXXXXXXXXXXXXXXXXXXHG---VSSRPYSVHVQFEAE-VITTITEGLLHSFFAPFGEVIAVILPQGPGILSSEGERTSGTCRRGYGFVHFSGSSQGRRCAIEAIRTLQGEISQGIRLQCAFSKKPGAPVRLGEGVALSKSHGSGVMHMDRGVSSSPPTMMQHYAPSCRPLHHLHPDADGGVEYMQHTHHPS---------THQD--MIPHYFYDLDHQHGGAGWQMVPPFLS 539 KE + EPK+D ILFIGDLARGLTE ++ QAF VG V+MVDIKRDK+TMRNLGYGFVQMS+ E+AA AK+RMQ +IQGRRIR+GWAQRNT LFIGDLD ST ++DLHR FG FG LY + +YLRQGK GKYGS KF R+DAETARREMHGR+L GT PIRVVWHHPQT VSSRPYSVHV FEA+ + +TE L++ FAPFG++IAVILPQGPGIL S+ CRRGYGFVHF+GS+ GR CAIEAIRTLQGEI GIRLQCAFS+KPG PVR G L++S G+ M + RG S P T M+H R + L A+ + + ++ S H D M+ +H + + +PPFLS Sbjct: 95 KEPENEPKDDCILFIGDLARGLTEREVAQAFAAVGNVEMVDIKRDKVTMRNLGYGFVQMSSHEQAAVAKERMQGADIQGRRIRIGWAQRNTTLFIGDLDESTNVEDLHRTFGPFGLLYTNDSYLRQGKCGKYGSVKFMSRKDAETARREMHGRVLRDGTRPIRVVWHHPQTITKKTGLSVPLPSNEQHSRELVHIPPPPPAGVLVSSRPYSVHVHFEADGMENLVTENLIYGLFAPFGQIIAVILPQGPGILCSDQNEDVSCCRRGYGFVHFTGSALGRLCAIEAIRTLQGEIVAGIRLQCAFSRKPGGPVRASYG--LTESRGTATMPLKRGHYSFPKTNMEHKLDISRLSYDLQAHAEERPQVIVLSNLTSCSGRSINVVKHADNHMVSGDVQQWNHAPKNSSDEYMPPFLS 506
BLAST of NO02G03730 vs. NCBI_GenBank
Match: XP_004346589.1 (RNA recognition motif domain containing protein [Acanthamoeba castellanii str. Neff] >ELR21644.1 RNA recognition motif domain containing protein [Acanthamoeba castellanii str. Neff]) HSP 1 Score: 186.8 bits (473), Expect = 2.200e-43 Identity = 115/309 (37.22%), Postives = 161/309 (52.10%), Query Frame = 0 Query: 134 GGLAAYKETQVEPKEDSILFIGDLARGLTEADLVQAFECVGKVQMVDIKRDKLTMRNLGYGFVQMSTREEAAAAKKRMQDVEIQGRRIRVGWAQRNTALFIGDLDASTTIDDLHRAFGLFGPLYEDQTYLRQGKYGKYGSCKFAQRQDAETARREMHGRILGAGTYPIRVVWHHPQTXXXXXXXXXXXXXXXXXXXXXXXXXXXXHGVSSRPYSVHVQFEAEVITTITEGLLHSFFAPFGEVIAVILPQGPGILSSEGERTSGTCRRGYGFVHFSGSSQGRRCAIEAIRTLQGEISQGIRLQCAFSKKP 443 G L + E ++ LFIGDLARGL E L +AF+ G + V+IKRD++T +LGYGFV + +RE+A AAKK M + GR IR+GWAQ+NT LFIGDLD S T L F FGP+YE++T++ K YG +F R+ AE A+REM+ ++LGA IR+ W + + + VH+QFE +TE + + F FG V++V LP+ G L RG+GF+++ + G A AI TL G+R+QC + KKP Sbjct: 47 GSLDSLPEAGEFEDDERCLFIGDLARGLNEDQLREAFDPFGVIS-VEIKRDRVTNYSLGYGFVLLKSREDAGAAKKAMHRQVVGGRAIRIGWAQKNTNLFIGDLDPSITSAQLREVFRQFGPIYEEETFV---KNRNYGFVRFRHRKHAEMAKREMNNKVLGARA--IRIGW---------------------------------GDANYQRHCVHIQFEPAESEALTESEVIAKFEEFGTVMSVNLPRNQGQL------------RGFGFIYYDDTDAGENSAARAITTLNNSPICGVRIQCNYGKKP 304
BLAST of NO02G03730 vs. NCBI_GenBank
Match: CBJ26054.1 (poly(A) binding protein, cytoplasmic 4-like [Ectocarpus siliculosus]) HSP 1 Score: 159.5 bits (402), Expect = 3.800e-35 Identity = 137/335 (40.90%), Postives = 192/335 (57.31%), Query Frame = 0 Query: 148 EDSILFIGDLARGLTEADLVQAFECVGKVQMVDIKRDKLTMRNLGYGFVQMSTREEAAAAKKRMQDVEIQGRRIRVGWAQRNTALFIGDLD-ASTTIDDLHRAFGLFGPLYEDQTYLRQGKYGKYGSCKFAQRQDAETARREMHGRILGAGTYP-IRVVWHHPQT-------------------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXHGVSSR----PYSVHVQFEAEV--ITTITEGLLHSFFAPFGEVIAVILPQGPGILSSEGERTSGTCRRGYGFVHFSGSSQGRRCAIEAIRTLQGEISQGIRLQCAFSKKPGAPVRLG 450 E+ LF+GDLAR LTE L +AFE G+V V IKRD+ T +NLGYGFV++S+ +EA AAK+ MQ VE+ GRR+RVGWAQ+NT+L++G L+ + T + L R F FGPL ++ T ++ G K+G K+ R AE A++E++ R G P + + W+ ++ XXXXXXXXXXXXXXXXXXXXXXXXXXXXH R ++VHVQFE + ++ + E ++ F + V+ +++P S G R C + FVHF + G R A +AI+ L G +R+ C S+ G R G Sbjct: 203 EECNLFVGDLARNLTEEKLEKAFEQHGRVMSVSIKRDRATGKNLGYGFVKLSSHQEARAAKEAMQGVELGGRRVRVGWAQKNTSLYVGGLEGGAITTEMLVREFARFGPLDKELTTIKPG--AKFGFVKYRYRLHAEAAKKELNERPAFDGLCPSLEIEWNSVESSAQASETXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHSRHPRGEVSSHTVHVQFEGDQGHVSAVNEVMIRKCFTKWEPVVDIVIPASRFNGVSPGPRQLPRC---WAFVHFPPTPDGERAAADAIKGLNGTTISELRVHCTMSR--GGSTRAG 530
BLAST of NO02G03730 vs. NCBI_GenBank
Match: ETO28118.1 (hypothetical protein RFI_09014, partial [Reticulomyxa filosa]) HSP 1 Score: 132.1 bits (331), Expect = 6.600e-27 Identity = 101/326 (30.98%), Postives = 132/326 (40.49%), Query Frame = 0 Query: 166 LVQAFECVGKVQMVDIKRDKLTMRNLGYGFVQMSTREEAAAAKKRMQDVEIQGRRIRVGWAQRNTALF---------------------------IGDLDASTTIDDLHRAFGLFGPLYEDQTYLRQGKYGKYGSCKFAQRQDAETARREMHGRILG-AGT-----YPIRVVWHHPQTXXXXXXXXXXXXXXXXXXXXXXXXXXXXHGVSSRPYSVHVQFEAEVIT-----------------TITEGLLHSFFAPFGEVIAVILPQGPGILSSEGERTSGTCRRGYGFVHFSGSSQGRRCAIEAIRTLQGEISQGIRLQCAFSKK 442 + + F G V+ VDIKRDK+T NLGYGFV +REEA AK+ M +EI GR IR+GWAQ+NT LF +GDLD+ + L F FGP+Y D T++ K YG KF R AE A+ + G+ L GT PIR+ W T + VHVQF++ +T + E F FG V+ V LP R S +GYGF+HF + G A AI TL + +QC F K+ Sbjct: 3 MAEIFSKFGAVENVDIKRDKVTKNNLGYGFVTFKSREEAEKAKRNMHGMEIGGRTIRIGWAQKNTNLFVKAFLFVCLFAKGGGVEGCKLYLLRTVVGDLDSRIDAEHLKTIFKQFGPIYNDDTFV---KNNGYGFVKFKHRTHAEKAKATLDGKFLTIPGTDQQTQRPIRIGWGDANT---------------------------------QRNCVHVQFDSTHVTHHTGNXXXXXXXXGTQMDLKESDFREVFQRFGRVVKVSLP-----------RFSDRKLKGYGFIHFEENDDGEEAAARAITTLSYGAINNVVMQCNFGKR 281
BLAST of NO02G03730 vs. NCBI_GenBank
Match: ETO09431.1 (hypothetical protein RFI_27944 [Reticulomyxa filosa]) HSP 1 Score: 122.9 bits (307), Expect = 4.000e-24 Identity = 99/316 (31.33%), Postives = 135/316 (42.72%), Query Frame = 0 Query: 148 EDSILFIGDLARGLTEADLVQAFECVGKVQMVDIKRDKLTMRNLGYGFVQMSTREEAAAAKKRMQDVEIQGRRIRVGWAQRNTALFIGDL----------------DASTTIDDLHRAFGLFGPLYEDQTYLRQGKYGKYGSCKFAQRQDAETARREMHGRILG-AGT-----YPIRVVWHHPQTXXXXXXXXXXXXXXXXXXXXXXXXXXXXHGVSSRPYSVHVQFEAEVITTITEGLLHSFFAPFGEVIAVILPQGPGILSSEGERTSGTCRRGYGFVHFSGSSQGRRCAIEAIRTLQGEISQGIRLQCAFSKK 442 +D+ LFIGDL+R ++E + + F G V+ V+IKRDK+T NLGYGFV +A M +E+ GR IR+GWAQ+NT LF+ + D L F FGP+Y D T++ K YG KF R AE A+ + G+ L GT PIR+ W T XXX V V + E F FG V+ V LP+ P +G+ +GY FVHF + +G A +I TL G+ +QC F K+ Sbjct: 214 DDTSLFIGDLSRHISEDHMREMFSKFGNVEHVEIKRDKVTKNNLGYGFVTFKVCNDAL-----MHGMELGGRPIRIGWAQKNTNLFVKRVFFFIFLTFHFFSRVLWKEIIDADHLKTIFKQFGPIYNDDTFV---KKNGYGFVKFKHRTHAEKAKAMLDGKFLTIPGTDEQTERPIRIGWGDANTQRNCVHVQFDGSHRHTHTDCVRGDHXXXXXXXXXXXGVQVDMK--------ENDFREVFQQFGYVVKVSLPRFP-----DGQ------LKGYAFVHFEENDKGEESAARSITTLSHGKINGVIIQCNFGKR 502
BLAST of NO02G03730 vs. NCBI_GenBank
Match: XP_005709003.1 (RNA-binding protein [Galdieria sulphuraria] >EME32483.1 RNA-binding protein [Galdieria sulphuraria]) HSP 1 Score: 107.5 bits (267), Expect = 1.700e-19 Identity = 81/289 (28.03%), Postives = 125/289 (43.25%), Query Frame = 0 Query: 152 LFIGDLARGLTEADLVQAFECVGKVQMVDIKRDKLTMRNLGYGFVQMSTREEAAAAKKRMQDVEIQGRRIRVGWAQRNTALFIGDLDASTTIDDLHRAFGLFGPLYEDQTYLRQGKYGKYGSCKFAQRQDAETARREMHGRILGAGTYPIRVVWHHPQTXXXXXXXXXXXXXXXXXXXXXXXXXXXXHGVSSRPYSVHVQFEAEVITTITEGLLHSFFAPFGEVIAVILPQGPGILSSEGERTSGTCRRGYGFVHFSGSSQGRRCAIEAIRTLQGEISQGIRLQCAFSK 441 +F+GDL + E L+ AF GKV VD+KRDK T LGY FV EEA A K + + RRIR G QRN L I +D+ +++ F +G L E++TY + YG +F R+DAE A++ + G + G + IRV W + + Y++ FE E IT + + FG V + + +G++T G G V+F+ +G A +A++ + + G ++ C F K Sbjct: 179 VFVGDLGGDINEDILLDAFSRFGKVTAVDLKRDKYTGEILGYAFVYFVQEEEAQKAMKLGNGMSLMNRRIRTGCPQRNATLHIPQIDSEINDEEIKTTFRKYGELVEEETYFIR---RCYGYIRFQAREDAERAKQHLDGATI--GKFKIRVEWANTELLR---------------------------------YAIQFHFEIERSNLITVESVKARMTRFGTVTKIEI-----FSDDQGQKT------GLGRVYFTPDKEGELAASKAVKFV--KYISGTKVWCTFLK 416
BLAST of NO02G03730 vs. NCBI_GenBank
Match: CEP00984.1 (hypothetical protein PBRA_008296 [Plasmodiophora brassicae]) HSP 1 Score: 106.3 bits (264), Expect = 3.900e-19 Identity = 93/352 (26.42%), Postives = 139/352 (39.49%), Query Frame = 0 Query: 144 VEPKEDSILFIGDLARGLTEA----------------------DLVQAFECVGKVQMVDIKRDKLTMRNLGYGFVQMSTREEAAAAKKRMQDVEIQGRRIRVGWAQRNTALFIGDLDASTTIDDLHRAFGLFGPLYEDQTYLRQGKYGKYGSCKFAQRQDAETARREMHGRILGAGTYPIRVVWHHPQTXXXXXXXXXXXXXXXXXXXXXXXXXXXXHGVSSRPYSVHVQFEAEVITTITEGLLHSFFAPFGEVIAVILPQGPGILSSEGERTSGTCRRGYGFVHFSGSSQGRRCAIEAIRTLQGEISQGIRLQCAFSKKPGAPVRLGEGVALSKSHGSGVMHMDRGVSSSP 474 ++ E+ LF+GD+ TE D++ AF G V V IK D++T + LGYGFV STR AAA+ E+ +RIR+GWA++N L + ++ + T L G FGP ++ Q + S KFA R AE R + G +L G P V W + +VHV F + +T+ L F+ FG V V+LP+ R T +G+GFV++ G R A AI+ + G G + C + + + L + + S+ HG RG P Sbjct: 44 IDDAENRTLFLGDVPAEATEVSPMPPANRLRSPPHQTLTYVQMDVLMAFCPYGDVDQVQIKVDRITKKPLGYGFVTFSTR---AAAESAFSHQELCSQRIRIGWARKNHTLVLRNVGPAPTASSLEAMLGRFGPFEIEEILPGQSQC----SVKFATRAIAERVREQCQGVVLHEGCPPCVVDWSYTNLN-----------------------------------NVHVHFGKD--RAVTDADLRDVFSKFGPVEKVVLPR---------HRNGST--KGFGFVYYPFGDDGERSAAAAIKAMNGGTLNGGVVICNYGHRQHSARALLKRMMSSRRHGRPATGKARGYPYQP 340
BLAST of NO02G03730 vs. NCBI_GenBank
Match: XP_024400989.1 (heterogeneous nuclear ribonucleoprotein Q-like [Physcomitrella patens] >XP_024400990.1 heterogeneous nuclear ribonucleoprotein Q-like [Physcomitrella patens] >XP_024400991.1 heterogeneous nuclear ribonucleoprotein Q-like [Physcomitrella patens] >XP_024400992.1 heterogeneous nuclear ribonucleoprotein Q-like [Physcomitrella patens] >PNR35679.1 hypothetical protein PHYPA_021529 [Physcomitrella patens]) HSP 1 Score: 93.2 bits (230), Expect = 3.400e-15 Identity = 77/301 (25.58%), Postives = 122/301 (40.53%), Query Frame = 0 Query: 146 PKEDSILFIGDLARGLTEADLVQAFECVGKVQMVDIKRDKLTMRNLGYGFVQMSTREEAAAAKKRMQDVEIQGRRIRVGWAQRNTALFIGDLDASTTIDDLHRAFGLFGPLYEDQTYLRQ----GKYGKYGSCKFAQRQDAETARREMHGRILGAGTYPIRVVWHHPQTXXXXXXXXXXXXXXXXXXXXXXXXXXXXHGVSSRPYSVHVQFEAEVITTITEGLLHSFFAPFGEVIAVILPQGPGILSSEGERTSGTCRRGYGFVHFSGSSQGRRCAIEAIRTLQGEISQGIRLQCAFSKKP 443 P S +F+G + R TE DL G V V + +DK T +N GY FV E A A + + D E++GR++R +Q LF+G++ + ++L GP + L+ G+ +G ++ AE ARREM GT + W P++ S V V + + ++TE L F GE++ V+LP G +R +GFVHFS +Q A++AI + +G L+ + +K P Sbjct: 121 PPHGSEIFVGGITRDTTEEDLRTLCSSCGDVYEVRLLKDKDTGQNKGYAFVTFLNEECAEKAIETLNDSEVKGRKLRFSQSQSKHRLFVGNIPKTWEKEELESVLSEQGPGIQSVELLKDPKTPGRNRGFGFVEYYNHACAEHARREMSKSSFRLGTNAPTISWADPRSGPDV----------------------------SAMSQVKVVYVRNLPDSVTEEQLQKLFERHGEIVKVVLP----------ATKPGQAKRDFGFVHFSDRAQ----ALKAIEKTEVYELEGRILETSLAKPP 379
BLAST of NO02G03730 vs. NCBI_GenBank
Match: XP_024390737.1 (heterogeneous nuclear ribonucleoprotein Q-like [Physcomitrella patens] >XP_024390738.1 heterogeneous nuclear ribonucleoprotein Q-like [Physcomitrella patens] >XP_024390740.1 heterogeneous nuclear ribonucleoprotein Q-like [Physcomitrella patens] >PNR43302.1 hypothetical protein PHYPA_015682 [Physcomitrella patens]) HSP 1 Score: 92.8 bits (229), Expect = 4.400e-15 Identity = 78/308 (25.32%), Postives = 124/308 (40.26%), Query Frame = 0 Query: 146 PKEDSILFIGDLARGLTEADLVQAFECVGKVQMVDIKRDKLTMRNLGYGFVQMSTREEAAAAKKRMQDVEIQGRRIRVGWAQRNTALFIGDLDASTTIDDLHRAFGLFGPLYEDQTYLRQ----GKYGKYGSCKFAQRQDAETARREMHGRILGAGTYPIRVVWHHPQTXXXXXXXXXXXXXXXXXXXXXXXXXXXXHGVSSRPYSVHVQFEAEVITTITEGLLHSFFAPFGEVIAVILPQGPGILSSEGERTSGTCRRGYGFVHFSGSSQGRRCAIEAIRTLQGEISQGIRLQCAFSKKPGAPVRLG 450 P S +F+G + R TE DL G+V V + +DK T +N GY FV E A A + + D E++GR++R +Q LF+G++ + ++L + G GP + L+ G+ + ++ AE ARREM T + W P+ +S V V + + ++TE L F GEV V+LP G +R +GFVHFS +Q A++AI + +G L+ + +K P +G Sbjct: 119 PPHGSEIFVGGITRDTTEEDLRTLCSSCGEVYEVRLLKDKDTGQNKGYAFVTFMNEEYAEKAIELLNDSEVKGRKLRFSQSQSKHRLFVGNIPKTWEKEELEKVLGEQGPGIQSVELLKDPKTPGRNRGFAFVEYYNHACAEHARREMSKTSFRLETNAPTISWADPRNGPD----------------------------ASAMSQVKVVYVRNLPDSVTEEQLQKLFERHGEVTKVVLPAS----------KPGQAKRDFGFVHFSDRAQ----ALKAIEKTEVYELEGRTLETSLAKPPAEKRPIG 384
BLAST of NO02G03730 vs. NCBI_GenBank
Match: PTQ44587.1 (hypothetical protein MARPO_0019s0028 [Marchantia polymorpha] >PTQ44588.1 hypothetical protein MARPO_0019s0028 [Marchantia polymorpha] >PTQ44589.1 hypothetical protein MARPO_0019s0028 [Marchantia polymorpha]) HSP 1 Score: 88.2 bits (217), Expect = 1.100e-13 Identity = 80/309 (25.89%), Postives = 123/309 (39.81%), Query Frame = 0 Query: 146 PKEDSILFIGDLARGLTEADLVQAFECVGKVQMVDIKRDKLTMRNLGYGFVQMSTREEAAAAKKRMQDVEIQGRRIRVGWAQRNTALFIGDLDASTTIDDLHRAFGLFGPLYEDQTYLRQ----GKYGKYGSCKFAQRQDAETARREMHGRILGAGTYPIRVVWHHPQTXXXXXXXXXXXXXXXXXXXXXXXXXXXXHGVSSRPYS-VHVQFEAEVITTITEGLLHSFFAPFGEVIAVILPQGPGILSSEGERTSGTCRRGYGFVHFSGSSQGRRCAIEAIRTLQGEISQGIRLQCAFSKKPGAPVRLG 450 P S +F+G + R E DL + G + V + +DK T +N GY FV +TRE A A + + D +++GR++R +Q LF+G++ + D+L + GP + L+ GK + ++ AE ARR M G+ + W P+ G + S V V + + T+TE L F GEV V+LP G +R +GFVHFS R A++AI G L+ + +K P LG Sbjct: 129 PPHGSEVFVGGVTRDTAEEDLRSLCQNCGDIYEVRLLKDKDTGQNKGYAFVTFTTRESAEKAIETLNDTDLKGRKLRFSHSQSKHRLFVGNIPKNWDKDELEKVLAEQGPGIQSVELLKDPKNPGKNRGFAFVEYYNHACAEHARRVMSKPNFRLGSNAPTISWADPR-----------------------------GGADTTSMSQVKVVYVRNLPDTVTEEQLQKLFEHHGEVTKVVLPSS----------KPGQSKRDFGFVHFS----ERSSALKAIEKTATYELGGRVLETSLAKPPTEKRPLG 394 The following BLAST results are available for this feature:
BLAST of NO02G03730 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO02G03730 ID=NO02G03730|Name=NO02G03730|organism=Nannochloropsis oceanica|type=gene|length=2274bpback to top protein sequence of NO02G03730.1 >NO02G03730.1-protein ID=NO02G03730.1-protein|Name=NO02G03730.1|organism=Nannochloropsis oceanica|type=polypeptide|length=691bpback to top Synonyms
Publications
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