NO02G03690, NO02G03690 (gene) Nannochloropsis oceanica

Overview
NameNO02G03690
Unique NameNO02G03690
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1322
Alignment locationchr2:995189..996510 +

Link to JBrowse

Properties
Property NameValue
DescriptionGcn5-related n-acetyltransferase
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr2genomechr2:995189..996510 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR016181Acyl_CoA_acyltransferase
Vocabulary: Molecular Function
TermDefinition
GO:0016740transferase activity
Homology
BLAST of NO02G03690 vs. NCBI_GenBank
Match: EWM30271.1 (gcn5-related n-acetyltransferase [Nannochloropsis gaditana])

HSP 1 Score: 278.1 bits (710), Expect = 3.400e-71
Identity = 137/227 (60.35%), Postives = 162/227 (71.37%), Query Frame = 0
Query:   91 MELNGPPPICPSCTHAHHPAQKCPVCGHRGKGKTYLLVAKTTAPSCATLHFESFDQRHEAQAFKSLWALARIVRNRVFVEEGRIAAELEFDVNDRSSRHVLGLVGDAPVLCARWRVEFGEGGXXXXXXXXXXXXXXCSIAVIDRLAVLEPYRGRGFSSHTLKFLLEDVDCMAREMQPQGWTIGAVAVTLPEKMLPFWGEKLRSQGGFEVVGGSYTDERNQLMLRMVR 318
            M+    PPIC +CTH H+P++KC VCGHRGKGKTYLLVAKTTAPSCATLHF+SFDQ  EAQAFKSLWALARI+R+RVFVEE  IA ELEFDV+D SS HVLG +GDAPVLCARWRVE   G                 +AVIDRLAVL+PYRGRGF++  LK L ED   + +  +     + A+AV +P  + P   +KLR QGGF V+G  + D RN+ MLRMVR
Sbjct:    1 MQPGNEPPICQTCTHPHYPSEKCAVCGHRGKGKTYLLVAKTTAPSCATLHFKSFDQTLEAQAFKSLWALARIIRSRVFVEEEGIAEELEFDVHDESSHHVLGFLGDAPVLCARWRVEHPNGWENRELLSPKMGGTAGPMAVIDRLAVLKPYRGRGFAAEVLKVLGEDAASVLQGTRLGKEVLRAIAVLIPVDLTPCLSDKLRDQGGFHVMGNPFMDARNKAMLRMVR 227          
BLAST of NO02G03690 vs. NCBI_GenBank
Match: CBJ26173.1 (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 100.1 bits (248), Expect = 1.300e-17
Identity = 71/165 (43.03%), Postives = 93/165 (56.36%), Query Frame = 0
Query:  131 TTAPSCATLHFESFDQRHEAQAFKSLWALARIVRNRVFVEEGRIAAELEFDVNDRSSRHVLGLVGDAPVLCARWRVEFGEGGXXXXXXXXXXXXXXCSIAVIDRLAVLEPYRGRGFSSHTLKFLLEDVDCMAREMQPQGWTIGAVAVTLPEKMLPFWGEKLRSQG 296
            T  P    L+F  FDQR   Q FK  WALARI+R RV+ EE  + ++ EF   D +SRHVL  +GDAP+   RWR E G      XXXXXXXXXXX   A++DRL VL+ YR RGF+   L+ ++ DV     +M+         A+ +P     F  +KL  +G
Sbjct:    3 TDMPCEKGLNFRFFDQRTNKQWFKGYWALARIIRRRVYCEEMGLTSQQEFTEMDPTSRHVLIQMGDAPLGYGRWRFETG-----PXXXXXXXXXXXXXYAMVDRLCVLKEYRQRGFAKSCLERIVHDVSTQTAQMK-----TAVAAIVVPAPPNTFAHQKLGERG 157          
BLAST of NO02G03690 vs. NCBI_GenBank
Match: XP_009837612.1 (hypothetical protein H257_12183 [Aphanomyces astaci] >ETV72826.1 hypothetical protein H257_12183 [Aphanomyces astaci])

HSP 1 Score: 95.9 bits (237), Expect = 2.400e-16
Identity = 74/226 (32.74%), Postives = 106/226 (46.90%), Query Frame = 0
Query:   99 ICPSCTHAHHPAQKCPVCGHRGKGKTYLLVAKTTAPSCATLHFESFDQRHEAQAFKSLWALARIVRNRVFVEEGRIAAELEFDVNDRSS--RHVLGLVGDAPVLCARWRVEFGEGGXXXXXXXXXXXXXXCSIAVIDRLAVLEPYRGRGFSSHTLKFLLEDVDCMAREMQPQGWTIGA-VAVTLPEKMLPFWGEKLRSQGGFEVVGGSY-TDERNQLMLRMVRLMS 321
            +C  C H H    KC +CGH GK K +  + K   P    L F SF         K  W+LAR+VR R F   G+    L FD +D S+   H L  VGDAPV  ARW      G                 +AVID+L+V++  R R + ++ L  ++ED+     +M  +G T+ A VA    +++ P W  KL  + GF+ +G  +       L ++MV L S
Sbjct:    3 LCRVCNHHHEDGVKCTICGHIGKSKVFQFL-KNNRP-INQLRFVSFCVDVNDSPSKGNWSLARLVRERNF---GKATIGL-FDSHDHSTTCNHALTFVGDAPVAAARWSWSVDNG---------------VEVAVIDKLSVIDIRRRRTYGTYILSNIIEDIKA---KMAVEGRTLYALVANVAHDQLHPAW--KLFVKFGFQPMGEPFAVPSSTHLHVKMVLLHS 202          
BLAST of NO02G03690 vs. NCBI_GenBank
Match: OQS02283.1 (hypothetical protein THRCLA_21455 [Thraustotheca clavata])

HSP 1 Score: 91.3 bits (225), Expect = 6.000e-15
Identity = 54/184 (29.35%), Postives = 88/184 (47.83%), Query Frame = 0
Query:   99 ICPSCTHAHHPAQKCPVCGHRGKGKTYLLVAKTTAPSCATLHFESFDQRHEAQAFKSLWALARIVRNRVFVEEGRIAAELEFDVND--RSSRHVLGLVGDAPVLCARWRVEFGEGGXXXXXXXXXXXXXXCSIAVIDRLAVLEPYRGRGFSSHTLKFLLEDVDCMAREMQPQGWTIGAVAVTLP 281
            +C  C H H    KCP+CGH GK K   L+ K    S   L F +F     A      WA +R++R  +F       + L FD  D   +++H+L  VGDAP+  ARW   +  G                 +A+I++L +L+ +R + + S TL+++++D+   + E+   G  I A+   +P
Sbjct:    3 LCTVCNHDHEAGVKCPICGHVGKCKVLQLLKK--IDSINLLSFLAFRVDVHASPILGNWAFSRLLREHIFAAPMPFESPL-FDNIDVINATKHILTFVGDAPIGTARWSFTYDNG---------------VEVALIEKLGILDSHRNKRYGSKTLEYIVKDITGTSTEV---GRDIYAIVANIP 165          
BLAST of NO02G03690 vs. NCBI_GenBank
Match: OQR92400.1 (hypothetical protein ACHHYP_20141 [Achlya hypogyna])

HSP 1 Score: 90.5 bits (223), Expect = 1.000e-14
Identity = 54/184 (29.35%), Postives = 86/184 (46.74%), Query Frame = 0
Query:   99 ICPSCTHAHHPAQKCPVCGHRGKGKTYLLVAKTTAPSCATLHFESFDQRHEAQAFKSLWALARIVRNRVFVEEGRIAAELEFDVND--RSSRHVLGLVGDAPVLCARWRVEFGEGGXXXXXXXXXXXXXXCSIAVIDRLAVLEPYRGRGFSSHTLKFLLEDVDCMAREMQPQGWTIGAVAVTLP 281
            +C  C H H    KCP+CGH GK K   L+ K T  +   + F SF     A      W+ +R++R ++F     +     FD  D   + +HVL  VGDAPV  ARW   +  G                 +A+I++L VL+ +R  G  +  L F+++D+   +R++   G  + A+   +P
Sbjct:    3 LCRVCNHHHEATVKCPICGHIGKCKVMQLLEKNTPIN--QVSFRSFRVDVHASPILGNWSFSRLLREKIFAAPTGMFDAPLFDNLDVTNACKHVLIFVGDAPVGSARWSFTYDNG---------------VEVALIEKLGVLDTHRRAGHGAKMLAFIVQDIATTSRDV---GRDVFAIVANIP 166          
BLAST of NO02G03690 vs. NCBI_GenBank
Match: XP_008606643.1 (hypothetical protein SDRG_02818 [Saprolegnia diclina VS20] >EQC40169.1 hypothetical protein SDRG_02818 [Saprolegnia diclina VS20])

HSP 1 Score: 84.3 bits (207), Expect = 7.300e-13
Identity = 48/169 (28.40%), Postives = 78/169 (46.15%), Query Frame = 0
Query:   99 ICPSCTHAHHPAQKCPVCGHRGKGKTYLLVAKTTAPSCATLHFESFDQRHEAQAFKSLWALARIVRNRVFVEEGRIAAELEFDVND--RSSRHVLGLVGDAPVLCARWRVEFGEGGXXXXXXXXXXXXXXCSIAVIDRLAVLEPYRGRGFSSHTLKFLLEDVDCMAREM 266
            +C  C H H    KCP+CGH GK K  +L+ K T  +  TL     D    A      W+ +R++R  +F     +     FD  D   + +HVL  VGDAPV  ARW   +  G                 +A+I++  +L+ +R +G  +  L ++++D+   + E+
Sbjct:    5 LCRVCNHEHEQGVKCPICGHTGKCKVLMLLKKNTPINQVTLRAFRIDV--HASPILGDWSFSRLLRENIFALPTAMFDAPLFDNLDVTNACKHVLIFVGDAPVGTARWSFTYDNG---------------VEVALIEKFGLLDTHRQQGHGTKMLDYIIQDIATTSAEV 156          
BLAST of NO02G03690 vs. NCBI_GenBank
Match: XP_009040133.1 (hypothetical protein AURANDRAFT_72289 [Aureococcus anophagefferens] >EGB05232.1 hypothetical protein AURANDRAFT_72289 [Aureococcus anophagefferens])

HSP 1 Score: 82.8 bits (203), Expect = 2.100e-12
Identity = 45/133 (33.83%), Postives = 67/133 (50.38%), Query Frame = 0
Query:  134 PSCATLHFESFDQRHEAQAFKSLWALARIVRNRVFVEEGRIAAELEFDVNDRSSRHVLGLVGDAPVLCARWRVEFGEGGXXXXXXXXXXXXXXCSIAVIDRLAVLEPYRGRGFSSHTLKFLLEDVDCMAREMQ 267
            P+   LHF  FD       +++   ++RI+R R FV+E  ++A++EFD  D  SRH LG  GDAPV  ARW ++                    + AV+DRL  L  YR RG +   ++ + +D+   A  MQ
Sbjct:   75 PADVNLHFRFFDITMSESEYRNNIDISRILRRRAFVDELGVSADVEFDNLDAKSRHSLGFYGDAPVSYARWHID-------------------GNAAVVDRLCTLRAYRYRGVARRCMENIAQDISHCASRMQ 188          
BLAST of NO02G03690 vs. NCBI_GenBank
Match: XP_008873144.1 (hypothetical protein H310_08983 [Aphanomyces invadans] >ETV98269.1 hypothetical protein H310_08983 [Aphanomyces invadans])

HSP 1 Score: 81.6 bits (200), Expect = 4.700e-12
Identity = 53/161 (32.92%), Postives = 75/161 (46.58%), Query Frame = 0
Query:   99 ICPSCTHAHHPAQKCPVCGHRGKGKTYLLVAKTTAPSCATLHFESFD-QRHEAQAFKSLWALARIVRNRVFVEEGRIAAELEFDVNDRSSRHVLGLVGDAPVLCARWRVEFGEGGXXXXXXXXXXXXXXCSIAVIDRLAVLEPYRGRGFSSHTLKFLLEDV 259
            +C  C H H    +C +CGH GK K +  + K   P    L F SF    +     K  W  AR++R R F   G  +  L  D + +++ HVL  VGDAPV  ARW      G                 IAVID+L V++  R R + ++TL  ++ED+
Sbjct:    3 LCRVCNHHHEEGVRCSICGHTGKSKVFQFL-KANRP-INQLRFVSFRVNGNSDNPCKGNWCFARLLRERNF---GTASTGLFDDSDVKTANHVLTFVGDAPVAAARWGWAVENG---------------VEIAVIDKLGVVDIRRRRTYGTYTLTNIIEDI 143          
BLAST of NO02G03690 vs. NCBI_GenBank
Match: XP_012204975.1 (hypothetical protein SPRG_10460 [Saprolegnia parasitica CBS 223.65] >KDO24382.1 hypothetical protein SPRG_10460 [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 80.5 bits (197), Expect = 1.100e-11
Identity = 45/169 (26.63%), Postives = 78/169 (46.15%), Query Frame = 0
Query:   99 ICPSCTHAHHPAQKCPVCGHRGKGKTYLLVAKTTAPSCATLHFESFDQRHEAQAFKSLWALARIVRNRVFVEEGRIAAELEFDVND--RSSRHVLGLVGDAPVLCARWRVEFGEGGXXXXXXXXXXXXXXCSIAVIDRLAVLEPYRGRGFSSHTLKFLLEDVDCMAREM 266
            +C  C H H    KCP+CGH GK K  +L+ K    +  +L     D    A      W+ +R++R ++F     +     FD  D   + +H+L  VGDAPV  ARW   +  G                 +A+I++  +L+ +R  G  +  L+++++D+   + E+
Sbjct:    5 LCRVCNHEHEQGVKCPICGHIGKCKVLMLLKKNAPINQVSLRAFRIDV--HASPILGDWSFSRLLREQIFALPTAMFGAPLFDNLDVTNACKHILIFVGDAPVGTARWSFTYDNG---------------VEVALIEKFGLLDTHRRLGHGTKMLEYIIQDIATTSAEV 156          
BLAST of NO02G03690 vs. NCBI_GenBank
Match: XP_024572714.1 (GNAT domain [Plasmopara halstedii] >CEG36345.1 GNAT domain [Plasmopara halstedii])

HSP 1 Score: 79.3 bits (194), Expect = 2.300e-11
Identity = 47/178 (26.40%), Postives = 79/178 (44.38%), Query Frame = 0
Query:  100 CPSCTHAHHPAQKCPVCGHRGKGKTYLLVAKTTAPSCATLHF-------ESFDQRHE-----------AQAFKSLWALARIVRNRVFVEEGRIAAELEFDVNDRSSRHVLGLVGDAPVLCARWRVEFGEGGXXXXXXXXXXXXXXCSIAVIDRLAVLEPYRGRGFSSHTLKFLLEDVD 260
            C  C H H    KCP+CGH GK + Y          C  ++F       + FD R +            +A  +LWA  +I+R ++F    ++       +ND  SRH++  VGD P+  A WR    E G                +AVI+ + +++  R +G++   L+ ++ED++
Sbjct:    5 CNVCRHLHEQGAKCPICGHTGKSRLY---------KCFKINFIAYQFTVQRFDGRGQDKTVEGTVQALERANMALWAFVKILREKIFSNLSKV------QLNDPMSRHLVSFVGDGPMGIACWRPVCEESGN--------------QVAVIEHVGIVKARRRQGYAKRLLRIVVEDIE 153          
The following BLAST results are available for this feature:
BLAST of NO02G03690 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM30271.13.400e-7160.35gcn5-related n-acetyltransferase [Nannochloropsis ... [more]
CBJ26173.11.300e-1743.03conserved unknown protein [Ectocarpus siliculosus][more]
XP_009837612.12.400e-1632.74hypothetical protein H257_12183 [Aphanomyces astac... [more]
OQS02283.16.000e-1529.35hypothetical protein THRCLA_21455 [Thraustotheca c... [more]
OQR92400.11.000e-1429.35hypothetical protein ACHHYP_20141 [Achlya hypogyna... [more]
XP_008606643.17.300e-1328.40hypothetical protein SDRG_02818 [Saprolegnia dicli... [more]
XP_009040133.12.100e-1233.83hypothetical protein AURANDRAFT_72289 [Aureococcus... [more]
XP_008873144.14.700e-1232.92hypothetical protein H310_08983 [Aphanomyces invad... [more]
XP_012204975.11.100e-1126.63hypothetical protein SPRG_10460 [Saprolegnia paras... [more]
XP_024572714.12.300e-1126.40GNAT domain [Plasmopara halstedii] >CEG36345.1 GNA... [more]

Pages

back to top
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL016nonsL016Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR032ncniR032Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR000ngnoR000Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK007028NSK007028Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO02G03690.1NO02G03690.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|667927gene_959Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100003g106gene366Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO02G03690.1NO02G03690.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO02G03690 ID=NO02G03690|Name=NO02G03690|organism=Nannochloropsis oceanica|type=gene|length=1322bp
ATGCAGCTCTACGTGTCATTTCTGCGCACCGCCACCAAGCTACACATGTC
GTCTCCGCGCTTGTGTGTAGCCTGTGTAGTGGTGCTGATGCTGACGCTGG
TCAAAGAATATGCGGGGAAAGTGACAAGGCAGACGAGATCTAATAATGCG
AGAAACCCTGCATCATGTCGCGGACgtgaggaactcgtttttaagaggaa
attaataagtgttcgggtcctccccttacaatttcttacccaatttcaaa
atccgatttgcacacagGAGCTGTCTTGGCCTTACACGACGACCGTCACG
ACGTCCGCAAGGTCTTGGCTGTGCCGATTATTTTGgtaattgagtcctcc
tttccacgcaacgacgggtcctgggcctcaccctctccgcgcacactcca
acgcagGCGCCCGCTTTTACGACACGAAAACGCATGGAGCTCAATGGCCC
GCCCCCTATCTGTCCATCCTGTACGCATGCACACCACCCGgtaagtcgtt
tggtcctccattttactgcctgcctccactccgcatctgttattccaagt
cggttcatggaggagtttgcctgtctgtgtgtcttttgtgtacacattat
atgctaagcactcttattcgtgtactgtaaattgcgtgacccatcattta
cattcttacaaatccctacttaccatatcggtccagGCGCAAAAGTGCCC
GGTGTGTGGGCACCGCGGCAAGGGAAAAACGTACCTTCTCGTAGCCAAGA
CGACCGCCCCGTCCTGCGCGACGCTGCACTTTGAAAGCTTCGACCAACGG
CATGAAGCCCAGGCATTCAAGAGCTTGTGGGCCTTGGCAAGGATAGTGCG
GAACCGGGTCTTTGTCGAGGAAGGCCGGATTGCCGCAGAATTAGAATTTG
ACGTCAACGATCGAAGCAGCCGCCATGTGCTTGGCCTTGTGGGGGATGCC
CCCGTCCTCTGTGCACGGTGGAGGGTTGAATTCGGAGAAGGGGGAAGTGG
AGGTGGACAACAGCAGGGGAAAGGCAGTGGAGGGGGGTGCTCTATAGCAG
TAATTGACCGATTGGCAGTGTTGGAGCCGTACCGTGGGAGGGGTTTTTCC
TCTCATACACTCAAGTTTTTGTTGGAGGATGTAGATTGCATGGCTCGAGA
GATGCAACCACAAGGATGGACGATTGGTGCGGTGGCTGTGACACTTCCGG
AGAAGATGTTACCGTTCTGGGGAGAGAAGCTGCGAAGCCAGGGTGGATTT
GAAGTGGTTGGAGGCTCGTATACTGATGAGAGGAATCAGCTGATGCTGAG
AATGGTACGGCTGATGTCTTAG
back to top

protein sequence of NO02G03690.1

>NO02G03690.1-protein ID=NO02G03690.1-protein|Name=NO02G03690.1|organism=Nannochloropsis oceanica|type=polypeptide|length=321bp
MQLYVSFLRTATKLHMSSPRLCVACVVVLMLTLVKEYAGKVTRQTRSNNA
RNPASCRGRAVLALHDDRHDVRKVLAVPIILAPAFTTRKRMELNGPPPIC
PSCTHAHHPAQKCPVCGHRGKGKTYLLVAKTTAPSCATLHFESFDQRHEA
QAFKSLWALARIVRNRVFVEEGRIAAELEFDVNDRSSRHVLGLVGDAPVL
CARWRVEFGEGGSGGGQQQGKGSGGGCSIAVIDRLAVLEPYRGRGFSSHT
LKFLLEDVDCMAREMQPQGWTIGAVAVTLPEKMLPFWGEKLRSQGGFEVV
GGSYTDERNQLMLRMVRLMS*
back to top
Synonyms
Publications