NO02G03680, NO02G03680 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO02G03680 vs. NCBI_GenBank
Match: EWM30291.1 (nadh ubiquinone [Nannochloropsis gaditana]) HSP 1 Score: 364.0 bits (933), Expect = 3.300e-97 Identity = 187/227 (82.38%), Postives = 197/227 (86.78%), Query Frame = 0 Query: 1 MSFMRASRAALLSSNAAFG---------AITRSSYSIIRTSSKALHASRPAPQSTEVTKATGGVDQLLKTKNGVEYVVSKVDDLVNWARKGSLWPMTFGLACCAVEMMHSAAARYDMERFGMVFRASPRQSDVMIVAGTLTNKMAPALRKVYDQMPEPRWVVSMGSCANGGGYYHYSYAVVRGCDRIVPVDIYVPGCPPTAEALLYGMLQLQKKVKGNKGLLLKLRK 219 M+ RA A+ +S A G + + + ++ RT + LHAS A +STEVTKA GGVDQLLKTKNGVEYVVSKVDDLVNWARKGSLWPMTFGLACCAVEMMHSAAARYDMERFGMVFRASPRQSDVMIVAGTLTNKMAPALRKVYDQMPEPRWVVSMGSCANGGGYYHYSYAVVRGCDRIVPVDIYVPGCPPTAEALLYGMLQLQKKVKGNKGLLLKLRK Sbjct: 1 MALSRARIIAMTTSRAIRGVPGCIRDPCSSSITGQNVTRTCIRELHASGRASKSTEVTKAAGGVDQLLKTKNGVEYVVSKVDDLVNWARKGSLWPMTFGLACCAVEMMHSAAARYDMERFGMVFRASPRQSDVMIVAGTLTNKMAPALRKVYDQMPEPRWVVSMGSCANGGGYYHYSYAVVRGCDRIVPVDIYVPGCPPTAEALLYGMLQLQKKVKGNKGLLLKLRK 227
BLAST of NO02G03680 vs. NCBI_GenBank
Match: CBN79990.1 (NUO10 homolog, NADH dehydrogenase (ubiquinone) subunit 10 [Ectocarpus siliculosus]) HSP 1 Score: 321.2 bits (822), Expect = 2.400e-84 Identity = 163/220 (74.09%), Postives = 183/220 (83.18%), Query Frame = 0 Query: 5 RASRAALLSSNAAFGAITRSSYSIIRTSSKALHASRPA-----PQSTEVTKATGGVDQLLKT-KNGVEYVVSKVDDLVNWARKGSLWPMTFGLACCAVEMMHSAAARYDMERFGMVFRASPRQSDVMIVAGTLTNKMAPALRKVYDQMPEPRWVVSMGSCANGGGYYHYSYAVVRGCDRIVPVDIYVPGCPPTAEALLYGMLQLQKKVKGNKGLLLKLRK 219 R A + A A+ R+ +++ T+ K S P S+E+T+A VDQL++ K GVE+VVSKVDDLVNWARKGSLWPMTFGLACCAVEMMHSAA+RYD+ERFGMVFRASPRQSDVMIVAGTL NKMAPALRKVYDQMPEPRWVVSMGSCANGGGYYHYSY+VVRGCDRIVPVDIYVPGCPPTAEALLYG+LQLQKK+KGNK LLL+L+K Sbjct: 7 RRGLAIAMQQTRATAAVYRAPVALLHTTDKKQEQSSKVQDMRKPTSSELTRAE-NVDQLMQQGKGGVEFVVSKVDDLVNWARKGSLWPMTFGLACCAVEMMHSAASRYDLERFGMVFRASPRQSDVMIVAGTLCNKMAPALRKVYDQMPEPRWVVSMGSCANGGGYYHYSYSVVRGCDRIVPVDIYVPGCPPTAEALLYGLLQLQKKIKGNKSLLLRLKK 225
BLAST of NO02G03680 vs. NCBI_GenBank
Match: XP_002292597.1 (predicted protein [Thalassiosira pseudonana CCMP1335] >EED89793.1 predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 318.2 bits (814), Expect = 2.100e-83 Identity = 161/203 (79.31%), Postives = 172/203 (84.73%), Query Frame = 0 Query: 23 RSSYSIIRTSSKALHA-SRPAPQSTEVTKATGGVDQLL------KTKNGVEYVVSKVDDLVNWARKGSLWPMTFGLACCAVEMMHSAAARYDMERFGMVFRASPRQSDVMIVAGTLTNKMAPALRKVYDQMPEPRWVVSMGSCANGGGYYHYSYAVVRGCDRIVPVDIYVPGCPPTAEALLYGMLQLQKKVKGNKGLLLKLRK 219 RS++ TSS + S A +T GVD+LL T N VEY VS+VDDLVNWARKGSLWPMTFGLACCAVEMMH+AA+RYDMERFGMVFRASPRQSDVMIVAGTLTNKMAPALRKVYDQMPEPRWVVSMGSCANGGGYYHYSY+VVRGCDRIVPVDIYVPGCPPTAEALLYG+LQLQKK+KGNK LLLKLRK Sbjct: 14 RSAFPCNSTSSIICRSMSDKASSTTSSLTRLDGVDELLTGTGGVPTSNKVEYAVSRVDDLVNWARKGSLWPMTFGLACCAVEMMHAAASRYDMERFGMVFRASPRQSDVMIVAGTLTNKMAPALRKVYDQMPEPRWVVSMGSCANGGGYYHYSYSVVRGCDRIVPVDIYVPGCPPTAEALLYGLLQLQKKIKGNKSLLLKLRK 216
BLAST of NO02G03680 vs. NCBI_GenBank
Match: EJK59639.1 (hypothetical protein THAOC_20103 [Thalassiosira oceanica]) HSP 1 Score: 315.8 bits (808), Expect = 1.000e-82 Identity = 159/205 (77.56%), Postives = 170/205 (82.93%), Query Frame = 0 Query: 20 AITRSSYSIIRTSSKALHASRPAPQSTEVTKATGGVDQLL------KTKNGVEYVVSKVDDLVNWARKGSLWPMTFGLACCAVEMMHSAAARYDMERFGMVFRASPRQSDVMIVAGTLTNKMAPALRKVYDQMPEPRWVVSMGSCANGGGYYHYSYAVVRGCDRIVPVDIYVPGCPPTAEALLYGMLQLQKKVKGNKGLLLKLRK 219 A+ S S I S + A A +T GVD++L N VEY VS+VDDLVNWARKGSLWPMTFGLACCAVEMMH+AA+RYDMERFGMVFRASPRQSDVMIVAGTLTNKMAPALRKVYDQMPEPRWVVSMGSCANGGGYYHYSY+VVRGCDRIVPVDIYVPGCPPTAEALLYG+LQLQKK+KGNK LLLKLRK Sbjct: 18 ALQCDSPSSIACRSMSTAAPEKASSTTSSLTRLEGVDEVLTGMGGVPVNNKVEYAVSRVDDLVNWARKGSLWPMTFGLACCAVEMMHAAASRYDMERFGMVFRASPRQSDVMIVAGTLTNKMAPALRKVYDQMPEPRWVVSMGSCANGGGYYHYSYSVVRGCDRIVPVDIYVPGCPPTAEALLYGLLQLQKKIKGNKSLLLKLRK 222
BLAST of NO02G03680 vs. NCBI_GenBank
Match: XP_002185609.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC42907.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 313.9 bits (803), Expect = 3.900e-82 Identity = 146/158 (92.41%), Postives = 155/158 (98.10%), Query Frame = 0 Query: 61 TKNGVEYVVSKVDDLVNWARKGSLWPMTFGLACCAVEMMHSAAARYDMERFGMVFRASPRQSDVMIVAGTLTNKMAPALRKVYDQMPEPRWVVSMGSCANGGGYYHYSYAVVRGCDRIVPVDIYVPGCPPTAEALLYGMLQLQKKVKGNKGLLLKLRK 219 T + VEY +S+VDDLVNWARKGSLWPMTFGLACCAVEMMH+AA+RYDMERFGMVFRASPRQSDVMIVAGTLTNKMAPALRKVYDQMPEPRWVVSMGSCANGGGYYHYSY+VVRGCDRIVPVDIYVPGCPPTAEALLYG++QLQKKVKGNKGLLL+LRK Sbjct: 9 TADNVEYAISRVDDLVNWARKGSLWPMTFGLACCAVEMMHAAASRYDMERFGMVFRASPRQSDVMIVAGTLTNKMAPALRKVYDQMPEPRWVVSMGSCANGGGYYHYSYSVVRGCDRIVPVDIYVPGCPPTAEALLYGLIQLQKKVKGNKGLLLRLRK 166
BLAST of NO02G03680 vs. NCBI_GenBank
Match: OEU16002.1 (NADH:ubiquinone reductase [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 312.8 bits (800), Expect = 8.600e-82 Identity = 145/157 (92.36%), Postives = 154/157 (98.09%), Query Frame = 0 Query: 62 KNGVEYVVSKVDDLVNWARKGSLWPMTFGLACCAVEMMHSAAARYDMERFGMVFRASPRQSDVMIVAGTLTNKMAPALRKVYDQMPEPRWVVSMGSCANGGGYYHYSYAVVRGCDRIVPVDIYVPGCPPTAEALLYGMLQLQKKVKGNKGLLLKLRK 219 K+ VEY +S+VDDLVNWARKGSLWPMTFGLACCAVEMMH+AA+RYDMERFGMVFRASPRQSDVMIVAGTLTNKMAPALRKVYDQMPEPRWVVSMGSCANGGGYYHYSY+VVRGCDRIVPVDIYVPGCPPTAEALL+GMLQLQKK+KGNK LLLK+RK Sbjct: 67 KDNVEYTISRVDDLVNWARKGSLWPMTFGLACCAVEMMHAAASRYDMERFGMVFRASPRQSDVMIVAGTLTNKMAPALRKVYDQMPEPRWVVSMGSCANGGGYYHYSYSVVRGCDRIVPVDIYVPGCPPTAEALLFGMLQLQKKIKGNKALLLKMRK 223
BLAST of NO02G03680 vs. NCBI_GenBank
Match: GAY02190.1 (NADH ubiquinone oxidoreductase, putative [Pythium insidiosum]) HSP 1 Score: 310.8 bits (795), Expect = 3.300e-81 Identity = 152/193 (78.76%), Postives = 163/193 (84.46%), Query Frame = 0 Query: 30 RTSSKALHASRPAPQSTEVTKATGGVDQLL----KTKNGVEYVVSKVDDLVNWARKGSLWPMTFGLACCAVEMMHSAAARYDMERFGMVFRASPRQSDVMIVAGTLTNKMAPALRKVYDQMPEPRWVVSMGSCANGGGYYHYSYAVVRGCDRIVPVDIYVPGCPPTAEALLYGMLQLQKKVKGNKGLLLKLRK 219 R + ALHAS + + G V LL +N VEYVV+KVDDLVNW RKGSLWPMTFGLACCAVEMMH+A RYD+ERFGMVFRASPRQSDVMIVAGTLTNKMAPALR+VYDQMPEPRWV+SMGSCANGGGYYHYSYAVVRG DRIVPVDIYVPGCPPTAEALLYG++QLQKKVK NK LLLKLRK Sbjct: 15 RVGASALHASSASQSGALDVQQRGSVSDLLGGNAVARNSVEYVVAKVDDLVNWGRKGSLWPMTFGLACCAVEMMHTAGPRYDLERFGMVFRASPRQSDVMIVAGTLTNKMAPALRRVYDQMPEPRWVISMGSCANGGGYYHYSYAVVRGVDRIVPVDIYVPGCPPTAEALLYGLIQLQKKVKANKSLLLKLRK 207
BLAST of NO02G03680 vs. NCBI_GenBank
Match: GAX29260.1 (NADH dehydrogenase (ubiquinone) Fe-S protein 7 [Fistulifera solaris] >GAX27992.1 NADH dehydrogenase (ubiquinone) Fe-S protein 7 [Fistulifera solaris]) HSP 1 Score: 309.3 bits (791), Expect = 9.500e-81 Identity = 154/202 (76.24%), Postives = 168/202 (83.17%), Query Frame = 0 Query: 27 SIIRTSSKALHASRP-APQSTEVTKATGGVDQLLKTKNG---------VEYVVSKVDDLVNWARKGSLWPMTFGLACCAVEMMHSAAARYDMERFGMVFRASPRQSDVMIVAGTLTNKMAPALRKVYDQMPEPRWVVSMGSCANGGGYYHYSYAVVRGCDRIVPVDIYVPGCPPTAEALLYGMLQLQKKVKGNKGLLLKLRK 219 S +R ASR A + T A G +D + + G VEY +S+VDDLVNWARKGSLWPMTFGLACCAVEMMH+AA+RYDMERFGMVFRASPRQSDVMIVAGTLTNKMAPALRKVYDQMPEPRWVVSMGSCANGGGYYHYSYA+VRGCDRIVPVDIYVPGCPPTAEALLYG++QLQKK+K NKGLLL+LRK Sbjct: 11 SSLRCKGSCYLASRAMAGTAQSQTSALGKLDNVEEMLTGGGNVPVADNVEYAISRVDDLVNWARKGSLWPMTFGLACCAVEMMHAAASRYDMERFGMVFRASPRQSDVMIVAGTLTNKMAPALRKVYDQMPEPRWVVSMGSCANGGGYYHYSYAIVRGCDRIVPVDIYVPGCPPTAEALLYGLIQLQKKIKSNKGLLLRLRK 212
BLAST of NO02G03680 vs. NCBI_GenBank
Match: XP_002903054.1 (NADH ubiquinone oxidoreductase, putative [Phytophthora infestans T30-4] >EEY56224.1 NADH ubiquinone oxidoreductase, putative [Phytophthora infestans T30-4]) HSP 1 Score: 307.0 bits (785), Expect = 4.700e-80 Identity = 149/202 (73.76%), Postives = 170/202 (84.16%), Query Frame = 0 Query: 21 ITRSSYSIIRTSSKALHASRPAPQSTEVTKATGGVDQLL----KTKNGVEYVVSKVDDLVNWARKGSLWPMTFGLACCAVEMMHSAAARYDMERFGMVFRASPRQSDVMIVAGTLTNKMAPALRKVYDQMPEPRWVVSMGSCANGGGYYHYSYAVVRGCDRIVPVDIYVPGCPPTAEALLYGMLQLQKKVKGNKGLLLKLRK 219 + R S ++ RTS+ ++ PA S+ G + +LL +NGVEYVVS+VDDLVNW RK SLWP+TFGLACCAVEMMHSA +RYD ER GMVFRASPRQ+DVMIVAGTLTNKMAPALR+VYDQMPEPR+VVSMGSCANGGGYYHYSYAVVRG DR++PVDIYVPGCPPTAEALL+G++QLQKKVKGNK LLLKLRK Sbjct: 4 LVRRSGALARTSAVRCASAVPATSSSSAPAERGNIQELLGGNATARNGVEYVVSRVDDLVNWGRKSSLWPITFGLACCAVEMMHSAGSRYDFERMGMVFRASPRQTDVMIVAGTLTNKMAPALRRVYDQMPEPRYVVSMGSCANGGGYYHYSYAVVRGADRVIPVDIYVPGCPPTAEALLFGLMQLQKKVKGNKSLLLKLRK 205
BLAST of NO02G03680 vs. NCBI_GenBank
Match: XP_008898264.1 (hypothetical protein PPTG_06127 [Phytophthora parasitica INRA-310] >XP_008915245.1 hypothetical protein PPTG_18759 [Phytophthora parasitica INRA-310] >ETI31662.1 hypothetical protein F443_21376 [Phytophthora parasitica P1569] >ETK72060.1 hypothetical protein L915_20773 [Phytophthora parasitica] >ETL25486.1 hypothetical protein L916_20657 [Phytophthora parasitica] >ETL78702.1 hypothetical protein L917_20518 [Phytophthora parasitica] >ETM31967.1 hypothetical protein L914_20533 [Phytophthora parasitica] >ETM99509.1 hypothetical protein PPTG_18759 [Phytophthora parasitica INRA-310] >ETN15848.1 hypothetical protein PPTG_06127 [Phytophthora parasitica INRA-310] >ETO59623.1 hypothetical protein F444_22068 [Phytophthora parasitica P1976] >ETP01472.1 hypothetical protein F441_21264 [Phytophthora parasitica CJ01A1] >ETP29624.1 hypothetical protein F442_21212 [Phytophthora parasitica P10297] >KUF83861.1 NADH dehydrogenase iron-sulfur protein 7 [Phytophthora nicotianae] >KUF83862.1 NADH dehydrogenase iron-sulfur protein 7 [Phytophthora nicotianae] >KUF99686.1 hypothetical protein AM588_10008663 [Phytophthora nicotianae] >KUF99688.1 hypothetical protein AM588_10008665 [Phytophthora nicotianae] >KUF99689.1 hypothetical protein AM588_10008664 [Phytophthora nicotianae]) HSP 1 Score: 303.5 bits (776), Expect = 5.200e-79 Identity = 147/203 (72.41%), Postives = 170/203 (83.74%), Query Frame = 0 Query: 20 AITRSSYSIIRTSSKALHASRPAPQSTEVTKATGGVDQLL----KTKNGVEYVVSKVDDLVNWARKGSLWPMTFGLACCAVEMMHSAAARYDMERFGMVFRASPRQSDVMIVAGTLTNKMAPALRKVYDQMPEPRWVVSMGSCANGGGYYHYSYAVVRGCDRIVPVDIYVPGCPPTAEALLYGMLQLQKKVKGNKGLLLKLRK 219 ++ R S ++ RT + ++ PA ++ G + +LL +NGVEYVVS+VDDLVNW RK SLWP+TFGLACCAVEMMHSA +RYD ER GMVFRASPRQ+DVMIVAGTLTNKMAPALR+VYDQMPEPR+VVSMGSCANGGGYYHYSYAVVRG DR++PVDIYVPGCPPTAEALL+G++QLQKKVKGNK LLLKLRK Sbjct: 3 SLVRRSGALARTPAVRCASAVPATSTSSAPAERGNIQELLAGNATARNGVEYVVSRVDDLVNWGRKSSLWPITFGLACCAVEMMHSAGSRYDFERMGMVFRASPRQTDVMIVAGTLTNKMAPALRRVYDQMPEPRYVVSMGSCANGGGYYHYSYAVVRGVDRVIPVDIYVPGCPPTAEALLFGLMQLQKKVKGNKSLLLKLRK 205 The following BLAST results are available for this feature:
BLAST of NO02G03680 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO02G03680 ID=NO02G03680|Name=NO02G03680|organism=Nannochloropsis oceanica|type=gene|length=657bpback to top protein sequence of NO02G03680.1 >NO02G03680.1-protein ID=NO02G03680.1-protein|Name=NO02G03680.1|organism=Nannochloropsis oceanica|type=polypeptide|length=219bpback to top Synonyms
Publications
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