NO02G03560, NO02G03560 (gene) Nannochloropsis oceanica
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Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of NO02G03560 vs. NCBI_GenBank
Match: EWM29475.1 (hypothetical protein Naga_100128g9 [Nannochloropsis gaditana]) HSP 1 Score: 115.9 bits (289), Expect = 4.300e-22 Identity = 128/459 (27.89%), Postives = 190/459 (41.39%), Query Frame = 0
Query: 143 KLTSTFPKDLRYFSISTYDENGMPSDTLTDYEVLPTTGTNPYAFRDAHQTLPEGEAGTFEVYITLDGKVPNLPRENQLAVLGKNVDAKDRAACDTSVK--GGCAVVLIFRLFHVRDGYEPFDLATYEDPTVVWGNV-APAKLFYGNQSAGWMELFPCGRPAMNFTTQMFAEEARRRL----TSFRYNLPRHEALKNVNGNAFVLPVDDNQGLFSNADSNYMFAGSYYEAKPEGPVYLLGHITGRMPFTPTGGLERGPRFVDVPADYDIRYFGISTVDMAGGKPTLDSVADIDIENFYTINGALSWTGRNYSIITGPSKDIAEKCGLFQASRSLFLSTATPAYLQNEVPTGDLILPLPTYVAYVVRYMLASRNHTDAYIDAASDAKSVEWTRNACVAADEHIQGKEEHVHLTCYDPDWVAGKMKENVATIQYYLCDISAPESQRLTPFGRTLNKRRKDWI 595
K++++FP+ + YFS TY G P +L D + P+ G NPY +T EG AGT+E+Y+T DG N N++ L ++ +AA + +VV++ RL+ T E P VWG V P + + W EL PC + TT+ A R++ FRY + + + + + D+ LF D N G++ I G P T T GL GPR V +Y RY+ + D+ PT S+ D+ENFY W R Y I+ S DI + CGL +LFL L N P P A + R MLA + SD +S+E+ + C GKE C D++ + + ++Q Y CD++ TPF R+D+I
Sbjct: 56 KISASFPR-VVYFSYETYSLRGHPLTSLPDLRIDPSWGKNPY----REETTEEG-AGTYEIYVTRDG---NKGWPNEVRGLSEDHTNATQAAFSRVMDFVDNLSVVML-RLY------------TTEQPPSVWGGVDRPVISYTDDLGQTWKELQPC-----SDTTRYQFNRAMRQIGWTVYDFRYLIYHSQWYRLRSCHLLSKREADHPALF--PDVNVQLGGNFVMV-----------IEGTAPLTAT-GLFEGPRPVWNVTNYSTRYWSFAAADVFVPGPTYSSLTAQDMENFY----GKGW-DRRYKIVGATSIDIVKACGL-DDPHALFLPYKNE--LMNNNP--------PAVPAVIEREMLARH----MAMGLPSDKQSIEYVTSNC--------GKEN----KCLSIDFMKASLGDQYPSLQVYTCDVATGIK---TPF--VYQPYRRDYI 436
BLAST of NO02G03560 vs. NCBI_GenBank
Match: XP_005855631.1 (hypothetical protein NGA_0673800 [Nannochloropsis gaditana CCMP526] >EKU20720.1 hypothetical protein NGA_0673800 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 93.6 bits (231), Expect = 2.300e-15 Identity = 110/461 (23.86%), Postives = 196/461 (42.52%), Query Frame = 0
Query: 137 TSWNHVKLTSTFPKD-LRYFSISTYD-ENGMPSDTLTDYEVL---PTTGTNPYAFRDAHQTLPEGEAGTFEVYITLDGKVPNLPRENQLAVLGKNVDAKDRAACDTSVKGGCAVVLIFRLFHVRDGYEPFDLATYEDPTV------VWGNVAPA-------KLFYGNQSAGWMELFP-CGRPAMNFTTQMFAEEARRRLTSFRYNLPRHEALKNVNGNAFVLPVDDN---QGLFSNADSNYMFAGSYY---EAKPEGPVYLLGHITGRMPFTPTGGLERGPRFVDVPADYDIRYFGISTVDMAGGKPTLDSVADIDIENFYTIN--GALSWTGRNYSIITGPSKDIAEKCGLFQASRSLFLSTATPAYLQNEVPTGDLILPLPTYVAYVVRYMLASRNHTDAYIDAASDAKSVEWTRNACVAADEHIQGKEEHVHLTCYDPDWVAGKMKENVATIQYYLCD 571
T N ++ +FP++ +RYFS+ + + + G P T+ DYE+ P NP+A D+ + + GT+ + +T PR +Q L + + D + AV+L+ F+ D P +++ DP ++G P K + ++S +FP C + T + ++ + F +++ N FVL + ++ G++ N D+ Y+ A ++ E K + L+ +TG +P T + L P+ + D D+RY S++ + G PT+D++ D FY +W R+YS + ++D CGL+ AS+ LFLST LQ+ D L + R L R++ A + A DA +++ C DPD++ M++ IQ+Y CD
Sbjct: 165 TEKNIFRVRGSFPQEGVRYFSLQSNNVDVGFPISTIKDYEIEVDDPENTRNPFA-EDSDRPI-----GTYTINVT--------PRGDQ--GLKNELSLCPESMTDRQCRSVNAVMLM--RFYTSDPDRP-PVSSKTDPPASQPNDRLFGYATPPMVEERQFKSWTDDRSRDRWRVFPTCDQTRSTQVTSLISKHFYGMIPPFA------PPVRHNKNNNFVLYLGEDTATAGVYPNLDAAYLLAVAWQLSPELKDKPKKRLMARVTGTLPVT-SRNLFTDPKIANY-KDADVRYMSFSSIALVSGGPTMDTLDDAAFLRFYEPQQPEGEAW-NRSYSFVA--AEDPERTCGLYNASQELFLSTVLDGKLQDYWGILDRQL-----IPKTQRTRLPDRSNGYARLQCA-DASALD----------------------ACVDPDYLKNVMEDYYPRIQWYTCD 567
BLAST of NO02G03560 vs. NCBI_GenBank
Match: EWM30096.1 (hypothetical protein Naga_100193g4 [Nannochloropsis gaditana]) HSP 1 Score: 93.6 bits (231), Expect = 2.300e-15 Identity = 110/461 (23.86%), Postives = 196/461 (42.52%), Query Frame = 0
Query: 137 TSWNHVKLTSTFPKD-LRYFSISTYD-ENGMPSDTLTDYEVL---PTTGTNPYAFRDAHQTLPEGEAGTFEVYITLDGKVPNLPRENQLAVLGKNVDAKDRAACDTSVKGGCAVVLIFRLFHVRDGYEPFDLATYEDPTV------VWGNVAPA-------KLFYGNQSAGWMELFP-CGRPAMNFTTQMFAEEARRRLTSFRYNLPRHEALKNVNGNAFVLPVDDN---QGLFSNADSNYMFAGSYY---EAKPEGPVYLLGHITGRMPFTPTGGLERGPRFVDVPADYDIRYFGISTVDMAGGKPTLDSVADIDIENFYTIN--GALSWTGRNYSIITGPSKDIAEKCGLFQASRSLFLSTATPAYLQNEVPTGDLILPLPTYVAYVVRYMLASRNHTDAYIDAASDAKSVEWTRNACVAADEHIQGKEEHVHLTCYDPDWVAGKMKENVATIQYYLCD 571
T N ++ +FP++ +RYFS+ + + + G P T+ DYE+ P NP+A D+ + + GT+ + +T PR +Q L + + D + AV+L+ F+ D P +++ DP ++G P K + ++S +FP C + T + ++ + F +++ N FVL + ++ G++ N D+ Y+ A ++ E K + L+ +TG +P T + L P+ + D D+RY S++ + G PT+D++ D FY +W R+YS + ++D CGL+ AS+ LFLST LQ+ D L + R L R++ A + A DA +++ C DPD++ M++ IQ+Y CD
Sbjct: 5 TEKNIFRVRGSFPQEGVRYFSLQSNNVDVGFPISTIKDYEIEVDDPENTRNPFA-EDSDRPI-----GTYTINVT--------PRGDQ--GLKNELSLCPESMTDRQCRSVNAVMLM--RFYTSDPDRP-PVSSKTDPPASQPNDRLFGYATPPMVEERQFKSWTDDRSRDRWRVFPTCDQTRSTQVTSLISKHFYGMIPPFA------PPVRHNKNNNFVLYLGEDTATAGVYPNLDAAYLLAVAWQLSPELKDKPKKRLMARVTGTLPVT-SRNLFTDPKIANY-KDADVRYMSFSSIALVSGGPTMDTLDDAAFLRFYEPQQPEGEAW-NRSYSFVA--AEDPERTCGLYNASQELFLSTVLDGKLQDYWGILDRQL-----IPKTQRTRLPDRSNGYARLQCA-DASALD----------------------ACVDPDYLKNVMEDYYPRIQWYTCD 407
BLAST of NO02G03560 vs. NCBI_GenBank
Match: EWM26805.1 (protein of unknown function DUF1214 [Nannochloropsis gaditana]) HSP 1 Score: 88.6 bits (218), Expect = 7.300e-14 Identity = 107/460 (23.26%), Postives = 180/460 (39.13%), Query Frame = 0
Query: 130 LPLLPNLTSWNHVKLTSTFPKDLRYFSISTYDENGMPSDTLTDYEVLPTTGTNPYAFRDAHQTLPEGEAGTFEVYITLDGKVPNLPRENQLAVLGKNVDAKDRAACDTSVKGGCAVVLIFRLFHVRDGYEPFDLAT--------YEDPTVVWGNVAPAKLFYGNQSAGWMELFPCGRPAMNFTTQMFAEEARRRLTSFRYNLPRHE-ALKNVNGNAFVLP---VDDNQGLFSNADSNYMFAGSYYEAKPEGPVYLLGHITGRMPFTPTGGLERGPRFVDVPADYDIRYFGISTVDMAGGKPTLDSVADIDIENF-YTINGALSWT---GRNYSIITGPSKDIAEKCGLFQASRSLFLSTATPAYLQNEVPTGDLILPLPTYVAYVVRYMLASRNHTDAYIDAASDAKSVEWTRNACVAADEHIQGKEEHVHLTC-YDPDWVAGKMKENVATIQYYLCDIS 573
L + PN + + FP D RYFS+ TYDEN P L D EV+P+ G N +A + Q G F++ ++ DG N N+L + N +S G ++ ++ G +P Y+DP + A L GW ++ C T+ RL + +++NV ++ ++ F NAD Y+ A + + L+ + +P TP + RF+ P YD+RY +S D+ P L + D +I +F Y + GA W RN S++ ++ ++C + S SL L+ E +G+ P P + + V R ++ + A+ K + + + A E + G+ TC +P A MKE+ + +Y C S
Sbjct: 246 LMVFPNFGPSDLAMIEGEFP-DSRYFSVQTYDENFSPIAGLKDLEVVPSEGVNSFARKSPLQI----RDGRFKIVLSKDG---NRGFPNELPINVGNF---------SSTTTGYVMMRMY-------GVDPLAKTNANKLAKWGYKDPPTISLRTA-GSLTPTTWDQGWKKMPLCPDTNAEIITKAVTTAVNSRLIQMNFKEDSVSCSIENVKDGFMLMSRERASSSRAPFVNADGGYLMACANSRPEYIKNNDLIAVVNTFLPSTPYSKFK--ARFIGSPETYDMRYASLSVYDLRPPGPVLRTFPDAEIRDFYYDLYGAELWEEGFQRNVSMVVASNQAALDRCKV-DTSESLILTLDD----LEEQASGEPTSP-PEWWSIVYRELIPQSQIINGTNAASYGMKEQDIYKTSIQDAREIMCGENGD---TCDRNPYRAASIMKEHYPRVSWYTCSPS 669
BLAST of NO02G03560 vs. NCBI_GenBank
Match: EWM21339.1 (hypothetical protein Naga_100075g21 [Nannochloropsis gaditana]) HSP 1 Score: 81.3 bits (199), Expect = 1.200e-11 Identity = 105/415 (25.30%), Postives = 166/415 (40.00%), Query Frame = 0
Query: 100 HTHQPYSAHGSFLLRSRPSPSHCRSWPVCTLPLLPNLTSWNHVKLTSTFPKDLRYFSISTYDENGMPSDTLTDYEVLPTTGTNPYAFRDAHQTLPEGEAGTFEVYITLDGKVPNLPRENQLAVLGKNVDAKDRAACDTSVKGGCAVVLIFRLFHVRDGYEPFDLATYED---PTVVWGNV-APAKLFYGNQSAGWMELFPCGRPAMNFTTQMFAEEARRRLTSFRYNLPRHEALKNVNGNAFVL------PVDDNQGLFSNADSNYMFAGSYYEAKPEGPVYLLGHITGRMPFTPTGGLERGPRFVDVPADYDIRYFGISTVDMAGGKPTLDSVADIDIENFYTINGALSWTGRNYSIITGPSKDIAEKCGLFQASRSLFLS-TATPAYLQNEVPTGDLILPLPTYVAYVVRYML 504
H++ A GS L+S PSP + V ++ FP +RYFS + YD + TL D ++ P++G NP F D T E GT+E+Y++ DG + N++A L + + +L FRL + D ED WG V P +++ W + C T ++ T + NL + N F L P+ NA+ NY+F + K G + ITG++P TP GL R D A YD RY ++ D P+ +++ D DI N Y+ + S R Y+++ ++A+KCGL+ + + L T +P + LP A V+R++L
Sbjct: 132 HSYFTKDARGS-ALKSSPSPPPHKEEEV--------------YRIRGKFPY-VRYFSFTVYDASLQSISTLHDTDIRPSSGKNP--FNDIEVT--EDNMGTYEIYVSKDG---SKGYPNEMAALRPDSTSP-------------YALLAFRL-------QLLDPRAGEDRSGKNREWGYVDMPLVEILNHRNGEWDIIRRCSDEFQARTEEVIENLDLTFNTWWPKNL---QIGTECNATEFSLFDPEQNPIIRRGVAVRNANENYIF---WCMPKEIGKKDYIIRITGKLPRTPY-GLFDDIRVADT-ARYDSRYVSFTSADAIPLYPSYETIHDRDIFNHYSTDPFGSDWDRMYNLVATSDVNLAKKCGLYNRAEDVLLQLTRSPTFTH-----------LPHVPAIVMRHLL 484 The following BLAST results are available for this feature:
BLAST of NO02G03560 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 5
Relationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO02G03560 ID=NO02G03560|Name=NO02G03560|organism=Nannochloropsis oceanica|type=gene|length=2128bpback to top protein sequence of NO02G03560.1 >NO02G03560.1-protein ID=NO02G03560.1-protein|Name=NO02G03560.1|organism=Nannochloropsis oceanica|type=polypeptide|length=604bpback to top Synonyms
Publications
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