NO02G03530, NO02G03530 (gene) Nannochloropsis oceanica
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Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO02G03530 vs. NCBI_GenBank
Match: EWM30220.1 (60s ribosomal protein l13a [Nannochloropsis gaditana]) HSP 1 Score: 400.2 bits (1027), Expect = 4.200e-108 Identity = 197/213 (92.49%), Postives = 209/213 (98.12%), Query Frame = 0
Query: 1 MTFDSKEVIIDGRGHLLGRLASIVAKELLSGQKVVVVRCEELMISGGLTRNHTRYMQFLRKRTNTNPTKGPFHYRAPSRILWRTIRGMVPHKTFRGAQALERLTTFEGIPAPFDTKKRVVVPQALKILRLKPGRRFCTLGKLAHEVGWGHRDLVARLESKRKIRAEAFYQQKKAGTAAKALAERKAASDLAAVNSVLAGFGYHVAPTPTAERI 214
MTFDSKEV+IDGRGHLLGRL+SIVAKELLSGQKVVVVRCEELMISGGL RNHTRYMQFLRKRTNTNP +GPFHYRAPSRILWRTIRGM+PHKTFRGAQAL RLTTFEGIPAP+DTKKRVVVPQALKILRLKPGRRFCTL +LAHEVGWGHRDLVARLE+KRKI+AEA+YQQKKAGTAAKALAERKAAS+L+AVN+VLAGFGYHVAPTPTAERI
Sbjct: 1 MTFDSKEVVIDGRGHLLGRLSSIVAKELLSGQKVVVVRCEELMISGGLVRNHTRYMQFLRKRTNTNPKRGPFHYRAPSRILWRTIRGMLPHKTFRGAQALARLTTFEGIPAPYDTKKRVVVPQALKILRLKPGRRFCTLSRLAHEVGWGHRDLVARLEAKRKIKAEAYYQQKKAGTAAKALAERKAASELSAVNNVLAGFGYHVAPTPTAERI 213
BLAST of NO02G03530 vs. NCBI_GenBank
Match: PTQ45365.1 (hypothetical protein MARPO_0015s0154 [Marchantia polymorpha]) HSP 1 Score: 257.7 bits (657), Expect = 3.300e-65 Identity = 121/199 (60.80%), Postives = 156/199 (78.39%), Query Frame = 0
Query: 5 SKEVIIDGRGHLLGRLASIVAKELLSGQKVVVVRCEELMISGGLTRNHTRYMQFLRKRTNTNPTKGPFHYRAPSRILWRTIRGMVPHKTFRGAQALERLTTFEGIPAPFDTKKRVVVPQALKILRLKPGRRFCTLGKLAHEVGWGHRDLVARLESKRKIRAEAFYQQKKAGTAAKALAERKAASDLAAVNSVLAGFGYH 204
+K V++D R H+LGRLASI+AKELL+GQ+VVVVRCEE+ +SGGL R +Y++FLRKR NT P+KGP H+RAPSRILWRTIRGM+PHKT RGA ALERL FEG+P P+D KR+V+P ALK+LRL+PG +FC LG+L+ EVGW H D+V LE KRK++++ FY++KK A + LA +KA L A N +LA Y+
Sbjct: 9 AKVVVVDARHHMLGRLASILAKELLNGQRVVVVRCEEIALSGGLVRQKMKYLRFLRKRMNTKPSKGPIHFRAPSRILWRTIRGMIPHKTKRGAAALERLKAFEGVPQPYDKMKRMVIPDALKVLRLQPGHKFCLLGRLSSEVGWHHYDIVKELEEKRKVKSKVFYERKKQLIALRKLAAKKADEQLTAGNEILAPISYN 207
BLAST of NO02G03530 vs. NCBI_GenBank
Match: ORX99658.1 (60S ribosomal protein L16 [Basidiobolus meristosporus CBS 931.73]) HSP 1 Score: 254.6 bits (649), Expect = 2.800e-64 Identity = 120/202 (59.41%), Postives = 158/202 (78.22%), Query Frame = 0
Query: 1 MTFDSKEVIIDGRGHLLGRLASIVAKELLSGQKVVVVRCEELMISGGLTRNHTRYMQFLRKRTNTNPTKGPFHYRAPSRILWRTIRGMVPHKTFRGAQALERLTTFEGIPAPFDTKKRVVVPQALKILRLKPGRRFCTLGKLAHEVGWGHRDLVARLESKRKIRAEAFYQQKKAGTAAKALAERKAASDLAAVNSVLAGFGY 203
M+ K V+IDGRGHLLGRLASI++K++L+GQKVVVVRCEEL ++G RN +Y FLRKR NP+KGP+H+RAPSRILWRTIRGM+PHKT RG A+ERL FEG+P P+DT KR+VVP AL++LRLKPGR++ T+ +L+ EVGW + D+V +LE KRK++++A+Y++KKA KA A A DL ++N LA +GY
Sbjct: 1 MSTFEKVVVIDGRGHLLGRLASIISKQILNGQKVVVVRCEELNVTGSFFRNKIKYHAFLRKRCVVNPSKGPYHFRAPSRILWRTIRGMIPHKTARGTAAMERLKLFEGVPPPYDTMKRMVVPAALRVLRLKPGRKYTTVSRLSSEVGWKYEDVVKKLEEKRKVKSKAYYERKKAILNLKAKAAASKAEDLKSINESLAAYGY 202
BLAST of NO02G03530 vs. NCBI_GenBank
Match: XP_001630812.1 (predicted protein [Nematostella vectensis] >EDO38749.1 predicted protein [Nematostella vectensis]) HSP 1 Score: 254.6 bits (649), Expect = 2.800e-64 Identity = 114/197 (57.87%), Postives = 154/197 (78.17%), Query Frame = 0
Query: 6 KEVIIDGRGHLLGRLASIVAKELLSGQKVVVVRCEELMISGGLTRNHTRYMQFLRKRTNTNPTKGPFHYRAPSRILWRTIRGMVPHKTFRGAQALERLTTFEGIPAPFDTKKRVVVPQALKILRLKPGRRFCTLGKLAHEVGWGHRDLVARLESKRKIRAEAFYQQKKAGTAAKALAERKAASDLAAVNSVLAGFGY 203
K+++IDG GHLLGRLAS VAK +LSGQ+VVVVRCE++ ISG RN +Y+ FLRKRTNT P+ GPFH+RAPSRI WRT+RGM+PHKT +G +A+ R+ F+G+P P+D +KR+VVP ALK++RLKPGR+FC LG+L+HEVGW ++D++ LE KRK +++ +++ KK K AE A +L +VN LAG+GY
Sbjct: 5 KQIVIDGAGHLLGRLASTVAKSILSGQRVVVVRCEKICISGNFYRNKLKYLDFLRKRTNTKPSHGPFHFRAPSRIFWRTVRGMIPHKTKKGTEAMNRMKVFDGVPPPYDKEKRMVVPSALKVIRLKPGRKFCVLGRLSHEVGWKYQDILETLEEKRKAKSKLYFEHKKKVQKLKQTAELNKADELKSVNKTLAGYGY 201
BLAST of NO02G03530 vs. NCBI_GenBank
Match: ORX89730.1 (60S ribosomal protein L16 [Basidiobolus meristosporus CBS 931.73]) HSP 1 Score: 252.7 bits (644), Expect = 1.100e-63 Identity = 118/202 (58.42%), Postives = 157/202 (77.72%), Query Frame = 0
Query: 1 MTFDSKEVIIDGRGHLLGRLASIVAKELLSGQKVVVVRCEELMISGGLTRNHTRYMQFLRKRTNTNPTKGPFHYRAPSRILWRTIRGMVPHKTFRGAQALERLTTFEGIPAPFDTKKRVVVPQALKILRLKPGRRFCTLGKLAHEVGWGHRDLVARLESKRKIRAEAFYQQKKAGTAAKALAERKAASDLAAVNSVLAGFGY 203
M+ K ++IDGRGHLLGRLASI++K++L+GQKVVVVRCEEL ++G RN +Y FLRKR NP+KGP+H+RAPSRILWRTIRGM+PHKT RG A+ERL FEG+P P+DT KR+VVP AL++LRLKPGR++ T+ +L+ EVGW + D+V +LE KRK++++A+Y++KKA KA A + DL +N LA +GY
Sbjct: 1 MSTFEKVIVIDGRGHLLGRLASIISKQILNGQKVVVVRCEELNVTGSFFRNKIKYHAFLRKRCVVNPSKGPYHFRAPSRILWRTIRGMIPHKTARGTAAMERLKLFEGVPPPYDTMKRMVVPAALRVLRLKPGRKYTTISRLSSEVGWKYEDVVKKLEEKRKVKSKAYYERKKALLNLKAKAAAAKSEDLKTINESLAAYGY 202
BLAST of NO02G03530 vs. NCBI_GenBank
Match: XP_020904097.1 (60S ribosomal protein L13a-like [Exaiptasia pallida]) HSP 1 Score: 252.7 bits (644), Expect = 1.100e-63 Identity = 115/198 (58.08%), Postives = 154/198 (77.78%), Query Frame = 0
Query: 5 SKEVIIDGRGHLLGRLASIVAKELLSGQKVVVVRCEELMISGGLTRNHTRYMQFLRKRTNTNPTKGPFHYRAPSRILWRTIRGMVPHKTFRGAQALERLTTFEGIPAPFDTKKRVVVPQALKILRLKPGRRFCTLGKLAHEVGWGHRDLVARLESKRKIRAEAFYQQKKAGTAAKALAERKAASDLAAVNSVLAGFGY 203
S++++ID GHLLGRLAS VAK LL GQ+VVVVRCE++ ISG RN +Y+ FLRKRTNT P+ GPFH+RAPSRI WRT+RGM+PHKT RG +A+ RL F+G+P P+D +KR+VVP AL+++RLKPGR+FC LG+L+HEVGW ++D+++ LE KRK ++ ++ KK K AE+ AS+L +VN VL G+GY
Sbjct: 21 SQQILIDASGHLLGRLASTVAKSLLLGQRVVVVRCEQINISGNFYRNKLKYLDFLRKRTNTKPSHGPFHFRAPSRIFWRTVRGMIPHKTKRGTEAMNRLKVFDGVPHPYDKEKRMVVPSALRVIRLKPGRKFCVLGRLSHEVGWKYQDIISTLEEKRKAKSAVYFXHKKKLQKLKDKAEKSKASELKSVNEVLEGYGY 218
BLAST of NO02G03530 vs. NCBI_GenBank
Match: OAE18187.1 (hypothetical protein AXG93_406s1550 [Marchantia polymorpha subsp. ruderalis] >PTQ37931.1 hypothetical protein MARPO_0054s0044 [Marchantia polymorpha]) HSP 1 Score: 252.3 bits (643), Expect = 1.400e-63 Identity = 121/203 (59.61%), Postives = 155/203 (76.35%), Query Frame = 0
Query: 5 SKEVIIDGRGHLLGRLASIVAKELLSGQKVVVVRCEELMISGGLTRNHTRYMQFLRKRTNTNPTKGPFHYRAPSRILWRTIRGMVPHKTFRGAQALERLTTFEGIPAPFDTKKRVVVPQALKILRLKPGRRFCTLGKLAHEVGWGHRDLVARLESKRKIRAEAFYQQKKAGTAAKALAERKAASDLAAVNSVLAGFGYHVAPT 208
+K V++D R H+LGRLASI+AKELL+GQ+VVVVRCEE+ +SGGL R +Y++FLRKR NT P+KGP H+RAPSRILWRTIRGM+PHKT RGA ALERL FEGIP P+D KR+V+P ALK+LRL+PG +FC LG+L+ EVGW H D+V LE KRK++++ FY++KK + A +KA LA V++ L Y V T
Sbjct: 9 AKVVVVDARHHMLGRLASILAKELLNGQRVVVVRCEEIALSGGLVRQKMKYLRFLRKRMNTKPSKGPIHFRAPSRILWRTIRGMIPHKTKRGAAALERLKAFEGIPQPYDKMKRMVIPDALKVLRLQPGHKFCLLGRLSSEVGWHHYDIVKELEEKRKVKSKVFYERKKQLIQLRLKAAKKADEQLADVSATLLPLSYKVDAT 211
BLAST of NO02G03530 vs. NCBI_GenBank
Match: ORY03623.1 (60S ribosomal protein L16 [Basidiobolus meristosporus CBS 931.73]) HSP 1 Score: 251.9 bits (642), Expect = 1.800e-63 Identity = 119/202 (58.91%), Postives = 157/202 (77.72%), Query Frame = 0
Query: 1 MTFDSKEVIIDGRGHLLGRLASIVAKELLSGQKVVVVRCEELMISGGLTRNHTRYMQFLRKRTNTNPTKGPFHYRAPSRILWRTIRGMVPHKTFRGAQALERLTTFEGIPAPFDTKKRVVVPQALKILRLKPGRRFCTLGKLAHEVGWGHRDLVARLESKRKIRAEAFYQQKKAGTAAKALAERKAASDLAAVNSVLAGFGY 203
M+ K V+IDGRGHLLGRLASI++K++L+GQKVVVVRCEEL ++G RN +Y FLRKR NP+KGP+H+RAPSRILWRTIRGM+PHKT RG A+ERL FEG+P P+DT KR+VVP AL++LRLKPGR++ T+ +L+ EVGW + D+V +LE KRK++++A+Y++KKA K A A +L +VN LA +GY
Sbjct: 1 MSTFEKVVVIDGRGHLLGRLASIISKQILNGQKVVVVRCEELNVTGSFFRNKIKYHAFLRKRCVVNPSKGPYHFRAPSRILWRTIRGMIPHKTARGTAAMERLKLFEGVPPPYDTMKRMVVPAALRVLRLKPGRKYTTISRLSSEVGWKYEDVVKKLEEKRKVKSKAYYERKKALLNLKTKAAAAKAEELKSVNESLAAYGY 202
BLAST of NO02G03530 vs. NCBI_GenBank
Match: CBJ25662.1 (60S ribosomal protein L13a [Ectocarpus siliculosus]) HSP 1 Score: 251.1 bits (640), Expect = 3.100e-63 Identity = 121/196 (61.73%), Postives = 158/196 (80.61%), Query Frame = 0
Query: 8 VIIDGRGHLLGRLASIVAKELLSGQKVVVVRCEELMISGGLTRNHTRYMQFLRKRTNTNPTKGPFHYRAPSRILWRTIRGMVPHKTFRGAQALERLTTFEGIPAPFDTKKRVVVPQALKILRLKPGRRFCTLGKLAHEVGWGHRDLVARLESKRKIRAEAFYQQKKAGTAAKALAERKAA-SDLAAVNSVLAGFGY 203
V +DGRGHLLGRLAS+VAKELL GQKVVVVRCE++ ISG L RN +YMQ+ +KR NTNP +GP+H+R+P+RI WRT+RGM+P KT RG +AL RL+ FEGIPAP+D KKR+VVP AL+++R+ PGRRFC LG+L+ EVGW H +L+ RLE++RKI++EA+Y KK AAK L ++ A ++LAAV VL +G+
Sbjct: 6 VTVDGRGHLLGRLASVVAKELLGGQKVVVVRCEQITISGSLVRNKVKYMQYKKKRHNTNPKRGPYHFRSPARIFWRTVRGMLPRKTARGEEALARLSCFEGIPAPYDKKKRMVVPNALQVIRMAPGRRFCVLGRLSEEVGWPHAELIKRLEAQRKIKSEAYYVDKK---AAKQLKDKATAEANLAAVAPVLEEYGF 198
BLAST of NO02G03530 vs. NCBI_GenBank
Match: GAX14273.1 (large subunit ribosomal protein L13Ae [Fistulifera solaris]) HSP 1 Score: 251.1 bits (640), Expect = 3.100e-63 Identity = 121/194 (62.37%), Postives = 154/194 (79.38%), Query Frame = 0
Query: 9 IIDGRGHLLGRLASIVAKELLSGQKVVVVRCEELMISGGLTRNHTRYMQFLRKRTNTNPTKGPFHYRAPSRILWRTIRGMVPHKTFRGAQALERLTTFEGIPAPFDTKKRVVVPQALKILRLKPGRRFCTLGKLAHEVGWGHRDLVARLESKRKIRAEAFYQQKKAGTAAKALAERKAASDLAAVNSVLAGFGY 203
IIDGR HL GRL SIVAKELL+GQK+V+VRC+E+ ISG LTRN +Y QF KR NTNP +GPFH+++P+ ++WRTIRGMV KT RG +AL+RL+TFEGIPAP+D +KRVVVP AL+++RLKPGR + +G LAH VGW HR+L+ RLESKRK A+ F+++KKA A + AE A+S+LA VN VLA G+
Sbjct: 8 IIDGRDHLYGRLCSIVAKELLAGQKIVIVRCDEMCISGSLTRNKVKYAQFRNKRMNTNPGRGPFHFKSPAMMVWRTIRGMVNQKTVRGQEALQRLSTFEGIPAPYDKQKRVVVPAALRVMRLKPGRDYTIIGDLAHAVGWKHRELLQRLESKRKADAQEFFEKKKAKVALRRKAEEAASSELAKVNEVLASAGF 201 The following BLAST results are available for this feature:
BLAST of NO02G03530 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO02G03530 ID=NO02G03530|Name=NO02G03530|organism=Nannochloropsis oceanica|type=gene|length=1803bpback to top protein sequence of NO02G03530.1 >NO02G03530.1-protein ID=NO02G03530.1-protein|Name=NO02G03530.1|organism=Nannochloropsis oceanica|type=polypeptide|length=222bpback to top Synonyms
Publications
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