NO02G03510, NO02G03510 (gene) Nannochloropsis oceanica
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Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO02G03510 vs. NCBI_GenBank
Match: EWM30312.1 (ring u-box domain-containing protein [Nannochloropsis gaditana]) HSP 1 Score: 286.6 bits (732), Expect = 1.200e-73 Identity = 170/360 (47.22%), Postives = 215/360 (59.72%), Query Frame = 0
Query: 1 MGLMHSSHNKRAHVIKELERFTKPTGLYPSCAWEDKVVRKLILDGKLAPRFAGLEDKHNGTKECPICFLRHVVLNRTSCCRHGLCTECYLQVRKPKG-TSPCPYCQNSKLQILYGTDDEEKMATQELANIRHYDVLTASPQSIPVAMFSSSRSKEEAQEAWAVATQTSSGPAAHAVASPVAPCAASGSGYTA----------KNSRVESESHINSSRTTAGSLRGSSSSKNSYMGVIPYATVKQRSQIEEEMRKQHLTPTLGEELGENTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXERRAAQAQSYPRAHEDFVMRRALLESFGVPAHLQHVEDLMLMEAIQRSLEE 350
MGL HSS KRAH++KELERF+KP GLYPSC WED+ VRKLIL+G++AP F G+EDK GT+ECPICFLR+V+LN T CC H LCTECYLQ++ PK S CPYC + KLQILYGTDDEEKM QE ANIR YD+L+ + Q +P A FSS ++K E + AW Q P + A P++ AASGSG A ++ H+++SR+T ++ S+ +Y + ATVK+R +EEE +KQHL P+ E E+ R S A++ FVMRR +LE G+PAHLQHVEDLMLMEAIQRSLE+
Sbjct: 1 MGLAHSS--KRAHIMKELERFSKPCGLYPSCTWEDRTVRKLILEGRIAPCFPGMEDKGCGTEECPICFLRYVILNCTRCCNHPLCTECYLQLQAPKDLPSSCPYCNHPKLQILYGTDDEEKMMAQEFANIRLYDLLSMTTQPVPTAAFSSGKAKIEGRTAWVGGEQAGLHPGS---ARPLSFVAASGSGRCADVAVRNKERGTSNDTRRNCHVSASRSTTTAIYSSA----TYKQPVSLATVKERHNVEEEAKKQHLIPS-QEARNESMAATVGEIFSFRGTGCRSISTGRSIAVG--------------RVEHGIGSGQHANDHFVMRRRVLEPVGIPAHLQHVEDLMLMEAIQRSLED 336
BLAST of NO02G03510 vs. NCBI_GenBank
Match: XP_008910310.1 (hypothetical protein PPTG_15057 [Phytophthora parasitica INRA-310] >ETI39855.1 hypothetical protein F443_14620 [Phytophthora parasitica P1569] >ETK79959.1 hypothetical protein L915_14252 [Phytophthora parasitica] >ETL33377.1 hypothetical protein L916_14157 [Phytophthora parasitica] >ETL86688.1 hypothetical protein L917_13940 [Phytophthora parasitica] >ETM39860.1 hypothetical protein L914_14065 [Phytophthora parasitica] >ETN04383.1 hypothetical protein PPTG_15057 [Phytophthora parasitica INRA-310] >ETO68546.1 hypothetical protein F444_14633 [Phytophthora parasitica P1976] >ETP09700.1 hypothetical protein F441_14490 [Phytophthora parasitica CJ01A1] >ETP37871.1 hypothetical protein F442_14447 [Phytophthora parasitica P10297]) HSP 1 Score: 124.0 bits (310), Expect = 1.000e-24 Identity = 57/118 (48.31%), Postives = 79/118 (66.95%), Query Frame = 0
Query: 16 KELERFTKPTGLYPSCAWEDKVVRKLILDGKLAPRFAGLEDKHNG-TKECPICFLRHV-VLNRTSCCRHGLCTECYLQVRKPKGTSPCPYCQNSKLQILYGTDDEEKMAT-QELANIR 131
+ELE+FT+PTGLYPSC WE K R+LI++ KLAPRF G E K +G T ECPICF+ + LN +SCC +C+ECYLQ+R P+ CP+C + + Y ++AT + + N+R
Sbjct: 20 RELEKFTQPTGLYPSCPWELKTARRLIMERKLAPRFLGQETKEDGFTLECPICFMFYPGNLNTSSCCSKPICSECYLQIRPPQKPICCPFCNHDDFSVRYTPPSPAELATIRSMKNLR 137
BLAST of NO02G03510 vs. NCBI_GenBank
Match: OQS01072.1 (hypothetical protein THRCLA_05778 [Thraustotheca clavata]) HSP 1 Score: 122.9 bits (307), Expect = 2.300e-24 Identity = 68/180 (37.78%), Postives = 100/180 (55.56%), Query Frame = 0
Query: 4 MHSSHNKRAHVIKELERFTKPTGLYPSCAWEDKVVRKLILDGKLAPRFAGLEDKHNGTKECPICFLRH-VVLNRTSCCRHGLCTECYLQVRKPKGTSPCPYCQNSKLQILYGTDDEEKMAT---QELANIRHYDVLTASPQSIPVAMFSSSRSKEEAQEAWAVATQTSSGPAAHAVASPV 180
M +S K H KELER+T+PTGLY SC WE+K+VRKLIL+ KLAPR+ G E + + ECPICFL + LN+T+CC+ LCTEC LQ + P + CP+C + + + ++ Q ++ AS S F+S ++ QE A +TS+ H++ + +
Sbjct: 1 MGNSSVKARHA-KELERYTRPTGLYKSCLWENKIVRKLILERKLAPRYPGSESPRDDSYECPICFLHYPSTLNQTTCCKQALCTECVLQTKPPGKSVCCPFCNREEFKTNFAIGSSGRIKQRLYQADSDATDLSSPEASMSSSIEVQFASVADRKRLQEEVAAQARTSNLGQHHSIMNQI 179
BLAST of NO02G03510 vs. NCBI_GenBank
Match: OQS00639.1 (hypothetical protein ACHHYP_03292 [Achlya hypogyna]) HSP 1 Score: 122.5 bits (306), Expect = 2.900e-24 Identity = 58/120 (48.33%), Postives = 74/120 (61.67%), Query Frame = 0
Query: 4 MHSSHNKRAHVIKELERFTKPTGLYPSCAWEDKVVRKLILDGKLAPRFAGLEDKHNGTKECPICFLRH-VVLNRTSCCRHGLCTECYLQVRKPKGTSPCPYC--QNSKLQILYGTDDEEK 121
M +S K H KELER+T+PTGLY +C WE KVVRK+IL+ KLAPR+ G E + ECPICFL + LN+T+CC+ +C+EC LQ + P CP+C N K Q G K
Sbjct: 1 MGNSSGKTRHT-KELERYTQPTGLYTTCPWEHKVVRKMILERKLAPRYPGSESSRADSYECPICFLHYPSTLNQTTCCKQAICSECVLQTKPPNKVVSCPFCNHDNFKTQFAIGASGRMK 119
BLAST of NO02G03510 vs. NCBI_GenBank
Match: OWZ15663.1 (hypothetical protein PHMEG_00010657 [Phytophthora megakarya]) HSP 1 Score: 122.1 bits (305), Expect = 3.800e-24 Identity = 55/117 (47.01%), Postives = 75/117 (64.10%), Query Frame = 0
Query: 16 KELERFTKPTGLYPSCAWEDKVVRKLILDGKLAPRFAGLEDKHNG-TKECPICFLRHV-VLNRTSCCRHGLCTECYLQVRKPKGTSPCPYCQNSKLQILYGTDDEEKMATQELANIR 131
+ELE++T PTGLYPSC WE K R+LI++ KLAPRF G E K T ECPICF+ + LN +SCC +C+ECYLQ+R P+ PCP+C + + Y E + + + N+R
Sbjct: 20 RELEKYTHPTGLYPSCPWEFKTARRLIIERKLAPRFHGKEAKEGTFTLECPICFMFYPGSLNLSSCCNKPICSECYLQIRPPEKPIPCPFCNHEAFSVDYTPTATELASIRSMKNLR 136
BLAST of NO02G03510 vs. NCBI_GenBank
Match: POM81622.1 (Hypothetical protein PHPALM_376 [Phytophthora palmivora var. palmivora]) HSP 1 Score: 121.7 bits (304), Expect = 5.000e-24 Identity = 54/117 (46.15%), Postives = 74/117 (63.25%), Query Frame = 0
Query: 16 KELERFTKPTGLYPSCAWEDKVVRKLILDGKLAPRFAGLEDKHNG-TKECPICFLRHV-VLNRTSCCRHGLCTECYLQVRKPKGTSPCPYCQNSKLQILYGTDDEEKMATQELANIR 131
+ELE+FT+PTGLYPSC WE K R+LI++ KLAPRF G E K ECPICF+ + LN +SCC +C+ECYLQ+R P+ CP+C + + Y E + + + N+R
Sbjct: 20 RELEKFTQPTGLYPSCPWELKTARRLIIERKLAPRFPGKETKETSFALECPICFMFYPDSLNLSSCCNKPICSECYLQIRPPEKPISCPFCNHEAFSVHYTPTSTEMASIRSMKNLR 136
BLAST of NO02G03510 vs. NCBI_GenBank
Match: POM66095.1 (Hypothetical protein PHPALM_18098 [Phytophthora palmivora var. palmivora]) HSP 1 Score: 120.9 bits (302), Expect = 8.600e-24 Identity = 54/117 (46.15%), Postives = 74/117 (63.25%), Query Frame = 0
Query: 16 KELERFTKPTGLYPSCAWEDKVVRKLILDGKLAPRFAGLEDKHNG-TKECPICFLRHV-VLNRTSCCRHGLCTECYLQVRKPKGTSPCPYCQNSKLQILYGTDDEEKMATQELANIR 131
+ELE+FT+PTGLYPSC WE K R+LI++ KLAPRF G E K ECPICF+ + LN +SCC +C+ECYLQ+R P+ CP+C + + Y E + + + N+R
Sbjct: 20 RELEKFTQPTGLYPSCPWELKTARRLIIERKLAPRFPGKEIKETSFALECPICFMFYPDSLNLSSCCNKPICSECYLQIRPPEKPISCPFCNHEAFSVHYTPTSTEMASIRSMKNLR 136
BLAST of NO02G03510 vs. NCBI_GenBank
Match: XP_012198161.1 (hypothetical protein SPRG_04165 [Saprolegnia parasitica CBS 223.65] >KDO30977.1 hypothetical protein SPRG_04165 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 120.2 bits (300), Expect = 1.500e-23 Identity = 48/96 (50.00%), Postives = 68/96 (70.83%), Query Frame = 0
Query: 16 KELERFTKPTGLYPSCAWEDKVVRKLILDGKLAPRFAGLEDKHNGTKECPICFLRH-VVLNRTSCCRHGLCTECYLQVRKPKGTSPCPYCQNSKLQ 111
KELER+T+PTGLY SC W+ KVVRK+I + KLAPR+ G + + +G+ ECPICFL + LN+++CC+ +C+EC LQ + P CP+C N +
Sbjct: 12 KELERYTRPTGLYKSCPWDHKVVRKMIFERKLAPRYPGSDARQSGSYECPICFLHYPSTLNQSACCKQAICSECVLQTKPPNKVVSCPFCNNDNFK 107
BLAST of NO02G03510 vs. NCBI_GenBank
Match: XP_002998327.1 (conserved hypothetical protein [Phytophthora infestans T30-4] >EEY70673.1 conserved hypothetical protein [Phytophthora infestans T30-4]) HSP 1 Score: 119.0 bits (297), Expect = 3.300e-23 Identity = 55/118 (46.61%), Postives = 76/118 (64.41%), Query Frame = 0
Query: 16 KELERFTKPTGLYPSCAWEDKVVRKLILDGKLAPRFAGLEDKHN-GTKECPICFLRHV-VLNRTSCCRHGLCTECYLQVRKPKGTSPCPYCQNSKLQILYGTDDEEKMAT-QELANIR 131
+ELE+ T+PTGLYPSC WE K R+LI++ KLAPRF G E K T ECPICF+ + LN +SCC +C+ECYLQ+R P+ CP+C + Y + ++AT + + N+R
Sbjct: 20 RELEKLTQPTGLYPSCPWELKTARRLIMERKLAPRFPGQETKEGCFTLECPICFMFYPGNLNTSSCCTKPICSECYLQIRPPQKPICCPFCNQDDFSVRYASPSPAELATIRSMKNLR 137
BLAST of NO02G03510 vs. NCBI_GenBank
Match: XP_008605749.1 (hypothetical protein SDRG_01970 [Saprolegnia diclina VS20] >EQC40905.1 hypothetical protein SDRG_01970 [Saprolegnia diclina VS20]) HSP 1 Score: 118.6 bits (296), Expect = 4.300e-23 Identity = 48/96 (50.00%), Postives = 68/96 (70.83%), Query Frame = 0
Query: 16 KELERFTKPTGLYPSCAWEDKVVRKLILDGKLAPRFAGLEDKHNGTKECPICFLRH-VVLNRTSCCRHGLCTECYLQVRKPKGTSPCPYCQNSKLQ 111
KELER+T+PTGLY SC W+ KVVRK+IL+ KLAPR+ G + +G+ ECPICFL + LN+++CC+ +C+EC LQ + P CP+C + +
Sbjct: 12 KELERYTRPTGLYKSCPWDHKVVRKMILERKLAPRYPGSDAHQSGSYECPICFLHYPSTLNQSTCCKQAICSECVLQTKPPNKVVSCPFCNDDNFK 107 The following BLAST results are available for this feature:
BLAST of NO02G03510 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO02G03510 ID=NO02G03510|Name=NO02G03510|organism=Nannochloropsis oceanica|type=gene|length=3839bpback to top protein sequence of NO02G03510.1 >NO02G03510.1-protein ID=NO02G03510.1-protein|Name=NO02G03510.1|organism=Nannochloropsis oceanica|type=polypeptide|length=391bpback to top Synonyms
Publications
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