NO02G03410, NO02G03410 (gene) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO02G03410
Unique Name	NO02G03410
Type	gene
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	2632
Alignment location	chr2:914878..917509 -

Link to JBrowse

Properties


Property Name	Value
Description	AP-4 complex subunit sigma-1

Mutants

Expression

Analysis:

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Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr2	genome	chr2:914878..917509 -

Analyses

This gene is derived from or has results from the following analyses


Analysis Name	Date Performed
PRJNA769958	2024-08-13
GSE178672	2023-12-15
PRJNA933693	2023-10-26
PRJNA943449	2023-07-19
GSE149904	2020-10-10
NoIMET1_WT_HS	2020-09-29
GSE139615	2020-03-11
PRJNA241382	2020-03-11
BLASTP analysis of N. oceanica IMET1 genes	2019-07-11
InterPro analysis for N. oceanica IMET1 genes	2019-07-11
GO annotation for IMET1v2 genes	2019-07-10
PRJNA182180	2019-04-25
Gene prediction for N. oceanica IMET1	2017-10-24

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Biological Process**
Term	Definition
GO:0015031	protein transport
GO:0006810	transport

Vocabulary: **INTERPRO**
Term	Definition
IPR011012	Longin-like_dom
IPR016635	AP_complex_ssu
IPR022775	AP_mu_sigma_su

Vocabulary: **Cellular Component**
Term	Definition
GO:0016020	membrane
GO:0005623	cell

Homology

[Close]

BLAST of NO02G03410 vs. NCBI_GenBank
Match: XP_005856373.1 (AP-4 complex subunit sigma-1 [Nannochloropsis gaditana CCMP526] >EKU19989.1 AP-4 complex subunit sigma-1 [Nannochloropsis gaditana CCMP526] >EWM30223.1 ap-4 complex subunit sigma [Nannochloropsis gaditana])

HSP 1 Score: 284.6 bits (727), Expect = 6.100e-73
Identity = 144/168 (85.71%), Postives = 148/168 (88.10%), Query Frame = 0

Query:  367 MIKFILFVNKQGQTRLSSYYTWMSIPERVALEAEIIRKCLSRSELQCQFIEYRGHKVIYRRYASLFFIVGVDGDDVXXXXXXXXXXXXXXXELGILEFIHALVETLDKYFESVCELDIMFNLEKAHFIVDEMVGNGYIVDTNKANVLKPIHLMEKASASEESIFSRRG 535
            MI+FILFVNKQGQTRLSSYYTWMSIPERVALEAEIIRKCLSRSELQCQFIEYRGHKVIYRRYASLFFIVGV+GDD                EL ILEFIHALVETLDKYFESVCELDIMFNLEKAHFIVDEMV NG+IVD NK N+LKPIHLMEKASASEESIFSRRG
Sbjct:    1 MIRFILFVNKQGQTRLSSYYTWMSIPERVALEAEIIRKCLSRSELQCQFIEYRGHKVIYRRYASLFFIVGVEGDDATGSAHSVSTNGGCENELAILEFIHALVETLDKYFESVCELDIMFNLEKAHFIVDEMVINGHIVDANKTNILKPIHLMEKASASEESIFSRRG 168

[Close]

BLAST of NO02G03410 vs. NCBI_GenBank
Match: XP_009035511.1 (hypothetical protein AURANDRAFT_24131 [Aureococcus anophagefferens] >EGB09443.1 hypothetical protein AURANDRAFT_24131 [Aureococcus anophagefferens])

HSP 1 Score: 238.0 bits (606), Expect = 6.600e-59
Identity = 123/166 (74.10%), Postives = 137/166 (82.53%), Query Frame = 0

Query:  368 IKFILFVNKQGQTRLSSYYTWMSIPERVALEAEIIRKCLSRSELQCQFIEYRGHKVIYRRYASLFFIVGVDGDDVXXXXXXXXXXXXXXXELGILEFIHALVETLDKYFESVCELDIMFNLEKAHFIVDEMVGNGYIVDTNKANVLKPIHLMEKASASEESIFSRR 534
            I+FIL VNKQGQTRLS+YY W+ +PERVALE+EIIRKCLSRSE QC F+EYRG+KV+YRRYASLFFIVG + D                 ELGILEFIHALVETLDKYFESVCELDIMFNLEKAHFI+DEMV NG IV+TNKANVLKPI LMEK  ASEE++FS+R
Sbjct:    3 IRFILMVNKQGQTRLSTYYEWLPMPERVALESEIIRKCLSRSEFQCSFVEYRGYKVVYRRYASLFFIVGCEQDS--------------ENELGILEFIHALVETLDKYFESVCELDIMFNLEKAHFILDEMVMNGCIVETNKANVLKPIALMEK--ASEETLFSKR 152

[Close]

BLAST of NO02G03410 vs. NCBI_GenBank
Match: XP_002905143.1 (AP-4 complex subunit sigma, putative [Phytophthora infestans T30-4] >XP_008896360.1 AP-4 complex subunit sigma [Phytophthora parasitica INRA-310] >XP_008896363.1 AP-4 complex subunit sigma, variant 1 [Phytophthora parasitica INRA-310] >XP_009521354.1 hypothetical protein PHYSODRAFT_555587 [Phytophthora sojae] >EEY53525.1 AP-4 complex subunit sigma, putative [Phytophthora infestans T30-4] >EGZ26066.1 hypothetical protein PHYSODRAFT_555587 [Phytophthora sojae] >ETI35868.1 AP-4 complex subunit sigma [Phytophthora parasitica P1569] >ETI35869.1 AP-4 complex subunit sigma, variant 1 [Phytophthora parasitica P1569] >ETK76131.1 AP-4 complex subunit sigma [Phytophthora parasitica] >ETK76132.1 AP-4 complex subunit sigma, variant 1 [Phytophthora parasitica] >ETL29577.1 AP-4 complex subunit sigma [Phytophthora parasitica] >ETL29578.1 AP-4 complex subunit sigma, variant 1 [Phytophthora parasitica] >ETL82774.1 AP-4 complex subunit sigma [Phytophthora parasitica] >ETL82775.1 AP-4 complex subunit sigma, variant 1 [Phytophthora parasitica] >ETM36029.1 AP-4 complex subunit sigma [Phytophthora parasitica] >ETM36030.1 AP-4 complex subunit sigma, variant 1 [Phytophthora parasitica] >ETN18731.1 AP-4 complex subunit sigma [Phytophthora parasitica INRA-310] >ETN18732.1 AP-4 complex subunit sigma, variant 1 [Phytophthora parasitica INRA-310] >ETO64580.1 AP-4 complex subunit sigma [Phytophthora parasitica P1976] >ETO64581.1 AP-4 complex subunit sigma, variant 1 [Phytophthora parasitica P1976] >ETP05679.1 AP-4 complex subunit sigma [Phytophthora parasitica CJ01A1] >ETP05680.1 AP-4 complex subunit sigma, variant 1 [Phytophthora parasitica CJ01A1] >ETP33809.1 AP-4 complex subunit sigma [Phytophthora parasitica P10297] >ETP33810.1 AP-4 complex subunit sigma, variant 1 [Phytophthora parasitica P10297])

HSP 1 Score: 233.0 bits (593), Expect = 2.100e-57
Identity = 118/157 (75.16%), Postives = 130/157 (82.80%), Query Frame = 0

Query:  367 MIKFILFVNKQGQTRLSSYYTWMSIPERVALEAEIIRKCLSRSELQCQFIEYRGHKVIYRRYASLFFIVGVDGDDVXXXXXXXXXXXXXXXELGILEFIHALVETLDKYFESVCELDIMFNLEKAHFIVDEMVGNGYIVDTNKANVLKPIHLMEKAS 524
            MIKF+L VNKQGQTRL+ YY ++SI ERVALEAEIIRKCL R+E QC F+EYRG+KVIYRRYASLFFIVGV  DD                ELGILEFIHALVET+DKYFESVCELDIMFNLEKAHFI+DEMV NGYIV+TNK ++LKPIHLMEKAS
Sbjct:    1 MIKFVLMVNKQGQTRLAQYYDFLSIQERVALEAEIIRKCLGRNETQCSFVEYRGYKVIYRRYASLFFIVGVKDDD-------------SENELGILEFIHALVETMDKYFESVCELDIMFNLEKAHFILDEMVMNGYIVETNKISILKPIHLMEKAS 144

[Close]

BLAST of NO02G03410 vs. NCBI_GenBank
Match: CCA14478.1 (AP4 complex subunit sigma putative [Albugo laibachii Nc14])

HSP 1 Score: 228.8 bits (582), Expect = 4.000e-56
Identity = 116/157 (73.89%), Postives = 130/157 (82.80%), Query Frame = 0

Query:  367 MIKFILFVNKQGQTRLSSYYTWMSIPERVALEAEIIRKCLSRSELQCQFIEYRGHKVIYRRYASLFFIVGVDGDDVXXXXXXXXXXXXXXXELGILEFIHALVETLDKYFESVCELDIMFNLEKAHFIVDEMVGNGYIVDTNKANVLKPIHLMEKAS 524
            MIKF+L VNKQGQTRL+ YY ++SI ERVALEAEIIRKCLSR+E QC F+EYRG+KVIYRRYASLFFIVGV  DD                ELGILEFIHALVET+DKYFESVCELDIMFNLEKAHFI+DEMV NG IV++NK ++LKPIHLMEK+S
Sbjct:    1 MIKFVLMVNKQGQTRLAQYYDFLSIQERVALEAEIIRKCLSRNENQCSFVEYRGYKVIYRRYASLFFIVGVQNDD-------------SENELGILEFIHALVETMDKYFESVCELDIMFNLEKAHFILDEMVMNGSIVESNKVSILKPIHLMEKSS 144

[Close]

BLAST of NO02G03410 vs. NCBI_GenBank
Match: GAX93108.1 (AP4 complex subunit sigma putative [Pythium insidiosum])

HSP 1 Score: 228.4 bits (581), Expect = 5.200e-56
Identity = 116/157 (73.89%), Postives = 128/157 (81.53%), Query Frame = 0

Query:  367 MIKFILFVNKQGQTRLSSYYTWMSIPERVALEAEIIRKCLSRSELQCQFIEYRGHKVIYRRYASLFFIVGVDGDDVXXXXXXXXXXXXXXXELGILEFIHALVETLDKYFESVCELDIMFNLEKAHFIVDEMVGNGYIVDTNKANVLKPIHLMEKAS 524
            MIKF+L VNKQGQTRL+ YY ++SI ERVALEAEIIRKCL R+E QC F+EYRG+KVIYRRYASLFFIVGV  DD                ELG LEFIHALVET+DKYFESVCELDIMFNLEKAHFI+DEMV NGYIV+ NK ++LKPIHLMEKAS
Sbjct:    1 MIKFVLMVNKQGQTRLAQYYDFLSIQERVALEAEIIRKCLGRTENQCSFVEYRGYKVIYRRYASLFFIVGVKDDD-------------SENELGXLEFIHALVETMDKYFESVCELDIMFNLEKAHFILDEMVMNGYIVEANKISILKPIHLMEKAS 144

[Close]

BLAST of NO02G03410 vs. NCBI_GenBank
Match: XP_008873039.1 (AP-4 complex subunit sigma [Aphanomyces invadans] >ETV98164.1 AP-4 complex subunit sigma [Aphanomyces invadans])

HSP 1 Score: 226.9 bits (577), Expect = 1.500e-55
Identity = 114/157 (72.61%), Postives = 129/157 (82.17%), Query Frame = 0

Query:  367 MIKFILFVNKQGQTRLSSYYTWMSIPERVALEAEIIRKCLSRSELQCQFIEYRGHKVIYRRYASLFFIVGVDGDDVXXXXXXXXXXXXXXXELGILEFIHALVETLDKYFESVCELDIMFNLEKAHFIVDEMVGNGYIVDTNKANVLKPIHLMEKAS 524
            MIKF+L VNKQGQTRL+ YY ++ I ERVALEAEIIRKCL R+E QC F+EYRG+KVIYRRYASLFFIVGV+ DD                ELGILEFIHALVET+DKYFESVCELDIMFNLEKAHFI+DEM+ NG IV+TNK ++LKPIHLMEK+S
Sbjct:    1 MIKFVLMVNKQGQTRLAQYYDFLPIAERVALEAEIIRKCLGRNENQCSFVEYRGYKVIYRRYASLFFIVGVNNDD-------------SDNELGILEFIHALVETMDKYFESVCELDIMFNLEKAHFILDEMIMNGQIVETNKLSILKPIHLMEKSS 144

[Close]

BLAST of NO02G03410 vs. NCBI_GenBank
Match: XP_009842400.1 (AP-4 complex subunit sigma [Aphanomyces astaci] >ETV68101.1 AP-4 complex subunit sigma [Aphanomyces astaci])

HSP 1 Score: 226.5 bits (576), Expect = 2.000e-55
Identity = 113/157 (71.97%), Postives = 129/157 (82.17%), Query Frame = 0

Query:  367 MIKFILFVNKQGQTRLSSYYTWMSIPERVALEAEIIRKCLSRSELQCQFIEYRGHKVIYRRYASLFFIVGVDGDDVXXXXXXXXXXXXXXXELGILEFIHALVETLDKYFESVCELDIMFNLEKAHFIVDEMVGNGYIVDTNKANVLKPIHLMEKAS 524
            MIKF+L VNKQGQTRL+ YY ++ I ERVALEAEIIRKCL R+E QC F+EYRG+KVIYRRYASLFFIVGV+ DD                ELG+LEFIHALVET+DKYFESVCELDIMFNLEKAHFI+DEM+ NG IV+TNK ++LKPIHLMEK+S
Sbjct:    1 MIKFVLMVNKQGQTRLAQYYDFLPIAERVALEAEIIRKCLGRNENQCSFVEYRGYKVIYRRYASLFFIVGVNNDD-------------SDNELGVLEFIHALVETMDKYFESVCELDIMFNLEKAHFILDEMIMNGQIVETNKLSILKPIHLMEKSS 144

[Close]

BLAST of NO02G03410 vs. NCBI_GenBank
Match: OQR89916.1 (AP-4 complex subunit sigma [Thraustotheca clavata] >OQS00955.1 AP-4 complex subunit sigma [Achlya hypogyna])

HSP 1 Score: 223.8 bits (569), Expect = 1.300e-54
Identity = 113/157 (71.97%), Postives = 128/157 (81.53%), Query Frame = 0

Query:  367 MIKFILFVNKQGQTRLSSYYTWMSIPERVALEAEIIRKCLSRSELQCQFIEYRGHKVIYRRYASLFFIVGVDGDDVXXXXXXXXXXXXXXXELGILEFIHALVETLDKYFESVCELDIMFNLEKAHFIVDEMVGNGYIVDTNKANVLKPIHLMEKAS 524
            MIKF+L VNKQGQTRL+ Y  ++ I ERVALEAEIIRKCL R+E QC F+EYRG+KVIYRRYASLFFIVGV+ DD                ELGILEFIHALVET+DKYFESVCELDIMFNLEKAHFI+DEM+ NG IV+TNK ++LKPIHLMEK+S
Sbjct:    1 MIKFVLMVNKQGQTRLAQYVDFLPIAERVALEAEIIRKCLGRNENQCSFVEYRGYKVIYRRYASLFFIVGVNNDD-------------SDNELGILEFIHALVETMDKYFESVCELDIMFNLEKAHFILDEMIMNGCIVETNKVSILKPIHLMEKSS 144

[Close]

BLAST of NO02G03410 vs. NCBI_GenBank
Match: XP_008621007.1 (AP-4 complex subunit sigma [Saprolegnia diclina VS20] >XP_012201154.1 AP-4 complex subunit sigma [Saprolegnia parasitica CBS 223.65] >EQC25551.1 AP-4 complex subunit sigma [Saprolegnia diclina VS20] >KDO28016.1 AP-4 complex subunit sigma [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 223.4 bits (568), Expect = 1.700e-54
Identity = 112/157 (71.34%), Postives = 128/157 (81.53%), Query Frame = 0

Query:  367 MIKFILFVNKQGQTRLSSYYTWMSIPERVALEAEIIRKCLSRSELQCQFIEYRGHKVIYRRYASLFFIVGVDGDDVXXXXXXXXXXXXXXXELGILEFIHALVETLDKYFESVCELDIMFNLEKAHFIVDEMVGNGYIVDTNKANVLKPIHLMEKAS 524
            MIKF+L VNKQGQTRL+ Y  ++ I ERVALEAEIIRKCL R+E QC F+EYRG+KVIYRRYASLFFIVGV+ DD                ELG+LEFIHALVET+DKYFESVCELDIMFNLEKAHFI+DEM+ NG IV+TNK ++LKPIHLMEK+S
Sbjct:    1 MIKFVLMVNKQGQTRLAQYVDFLPIAERVALEAEIIRKCLGRNENQCSFVEYRGYKVIYRRYASLFFIVGVNNDD-------------SDNELGVLEFIHALVETMDKYFESVCELDIMFNLEKAHFILDEMIMNGCIVETNKVSILKPIHLMEKSS 144

[Close]

BLAST of NO02G03410 vs. NCBI_GenBank
Match: CBN77351.1 (Clathrin assembly complex, small subunit [Ectocarpus siliculosus])

HSP 1 Score: 223.0 bits (567), Expect = 2.200e-54
Identity = 111/169 (65.68%), Postives = 131/169 (77.51%), Query Frame = 0

Query:  367 MIKFILFVNKQGQTRLSSYYTWMSIPERVALEAEIIRKCLSRSELQCQFIEYRGHKVIYRRYASLFFI--VGVDGDDVXXXXXXXXXXXXXXXELGILEFIHALVETLDKYFESVCELDIMFNLEKAHFIVDEMVGNGYIVDTNKANVLKPIHLMEKASASEESIFSRR 534
            MIKF+L VNK GQTR+SSYY WM IPERVALEAE++R+C SRSELQC F E+RG+K+IYRRYASLFFI  VGVD DD                ELG+LEFIH LVETLDKYF+SVCELDIMFNLEK HFI+DEMV NGYI + N+ NVLKP+ LM+ +S + +S+F  +
Sbjct:    1 MIKFVLMVNKMGQTRVSSYYDWMPIPERVALEAEVVRRCFSRSELQCSFFEFRGYKIIYRRYASLFFIVGVGVDSDD--------------ENELGVLEFIHCLVETLDKYFQSVCELDIMFNLEKTHFILDEMVLNGYICEGNRENVLKPLLLMDSSSHAGDSVFGSK 155

The following BLAST results are available for this feature:

BLAST of NO02G03410 vs. NCBI_GenBank

BLAST of NO02G03410 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20


Match Name	E-value	Identity	Description
XP_005856373.1	6.100e-73	85.71	AP-4 complex subunit sigma-1 [Nannochloropsis gadi...	[more]
XP_009035511.1	6.600e-59	74.10	hypothetical protein AURANDRAFT_24131 [Aureococcus...	[more]
XP_002905143.1	2.100e-57	75.16	AP-4 complex subunit sigma, putative [Phytophthora...	[more]
CCA14478.1	4.000e-56	73.89	AP4 complex subunit sigma putative [Albugo laibach...	[more]
GAX93108.1	5.200e-56	73.89	AP4 complex subunit sigma putative [Pythium insidi...	[more]
XP_008873039.1	1.500e-55	72.61	AP-4 complex subunit sigma [Aphanomyces invadans] ...	[more]
XP_009842400.1	2.000e-55	71.97	AP-4 complex subunit sigma [Aphanomyces astaci] >E...	[more]
OQR89916.1	1.300e-54	71.97	AP-4 complex subunit sigma [Thraustotheca clavata]...	[more]
XP_008621007.1	1.700e-54	71.34	AP-4 complex subunit sigma [Saprolegnia diclina VS...	[more]
CBN77351.1	2.200e-54	65.68	Clathrin assembly complex, small subunit [Ectocarp...	[more]

Pages

Relationships

This gene is member of the following syntenic_region feature(s):


Feature Name	Unique Name	Species	Type
nonsL016	nonsL016	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region
ncniR032	ncniR032	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region
ngnoR000	ngnoR000	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region

This gene is orthologous to the following gene feature(s):


Feature Name	Unique Name	Species	Type
NSK006990	NSK006990	Nannochloropsis salina (N. salina CCMP1776)	gene

The following polypeptide feature(s) derives from this gene:


Feature Name	Unique Name	Species	Type
NO02G03410.1	NO02G03410.1-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following gene feature(s) are orthologous to this gene:


Feature Name	Unique Name	Species	Type
jgi.p\|Nanoce1779_2\|627337	gene_929	Nannochloropsis oceanica (N. oceanica CCMP1779)	gene
Naga_100003g142	gene341	Nannochloropsis gaditana (N. gaditana B-31)	gene

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
NO02G03410.1	NO02G03410.1	Nannochloropsis oceanica (N. oceanica IMET1)	mRNA

Sequences

The following sequences are available for this feature:

gene sequence
protein sequence

gene sequence

>NO02G03410 ID=NO02G03410|Name=NO02G03410|organism=Nannochloropsis oceanica|type=gene|length=2632bp
ATGGTCCATCTTGTCCCCTTCATCTTCAACCTGTTCCTAGGCGCCCATCT
CTGTCGAGCTGCTCGAATTTCAGCTGGCTATGAAGGTGAGCAGCAGCGCT
TGACTTTGCAATGCACCTACGCAGAGACCGCTCGAGTGCAACTTGCCGCA
CGGGCGCTGGGGATGTGCTTGGACGTGAAAATCGATGATGTGAAGGAGGC
ACTCTTCTTGCAGAAGCAGCATGGCAATCTGCTTGGAGGTATCGACCTCG
ACCAAATCACAACCTGTTTGCAAGCACAAAAGGAGGAGAAATTTGTCTTG
AGCGCGGCCTGTAGGGAGGAGTTGGCGCGCTTTGATGAGAAGGCCTCATT
GCACGACGGGAGCCCAGCATCTAAAATTGCATCAATATTTCGGGACCACC
CGGACGAAATGTGTGCCTGTATCGAGGCCATCGACGTCTCGGAAATCAGC
TGCGAAGGGTGGGGCGTGgtaagagagtggaagggtgtgtgtgagtgtgt
gtgtgactctctctctctctttacgaatgtcaagcaagcatgaggacttc
atgcttgtcaccctcaaatacttcagatatttgaataaaacacacattga
tgaatgcgagccgccgcgctccccctctttctacatcttcttttgtatgc
taatccaacacattgattgtctctcgtcaactcaaccccgtcacatctct
gccccgacctactattagATGCCGGCAATTCATAATGTCACACAGTCATG
TGGTTTGTTGCACGGTTCTCCCGTTCTGACACCTTCGAAGGACTTTCCAG
TCCAGCAGCAGCGGCAGCAGCACCAACATCCAGAGCAACCCGACCAAGAG
CAACAAGATCGTCAATCAGCGCCAGCGACGATCGATGGCCCTCCTTTACC
ACCAGCATCGCAGCCATCCCATCGTCTCGACCCGCAGTTTGGCGGCGAAG
AAGGTATCCTGGGTAACTTCCGAGAGCCTTATCACCCAGATGAGCGCACG
CAGCACACAATGTACTGTTATGAAGCCGCGGTTCATCTGTGCCCCCAAGC
TCGCGGCGCCCAAAACCCTTTAATTTTCCAGAAATGCGTAGAAAGAGCGG
TCCGTCAAGGTAAGTTAGGTGGAGAATGTTTAATTGTTTTGAAAGAAGTA
AATATCGATGCGTTGGCGCTGCAAGAGATTCAGGGCCTTCTGGGCCGGCA
TGAGATTCCTTTGGACGCGGACCAGCTGCAgtgcgtagaagaagtgtcgg
cggaatgtttggacgcaaaaaattcaggccagcttcgtgtttgtgttaat
aggggggtcagaaagcaaacgctgcgtccagcatgcctcagttatttgta
ccagtagcgtcctcacagtttgtacaggttgagaaaagctaaattactgc
gtggacttcataattgtgggatgtgatttagaaaatcggccaaaagcttg
tgtggctctgacacatgtatacccgttcttgaccacaataaaaatataga
aaaaaacgattcgttctatctcaggatcccgcttatattaatcccaatag
atacttgcatcctctttcttatagacatttgtacattttgtcaatttgaa
gttattcctctcttgtaccgtccccgtttgtctcatggcgtggtgacggt
ggctccgagtggcgttgcctttcgttcaaatgtatataccacgccctttt
tgtcgtcgtgaaatctcttatacggacggtaagcttcagctggaggatgg
gcaatttggcttttttgtgttaggtagagttcgatatctgcacagacatt
cgcatgaaaacagaaggcatttcaagatcgaacacactttaaatcagtat
gttcgctagagtacgcatgtaagcgtcgcacatcattcctcgtcccatgg
ccaactcatacccggcagtacccgtagcggcagcatttatgcaattggaa
gaaaccacgcccctttctgcatggctcagccatctggctacttattcatc
tccacagGGCTGCCAAGGCTAGGTTAGGCGTAGCTTTTGGCGGTGCCCGC
CGCACCATTCAGCTCGCAGCCACCTTCTGCCACGCTTCTGCGCCTGCCCC
AGCCCAAGCTTCATCACTTGGTAACATGATCAAGTTTATTCTCTTCGTTA
ACAAGCAAGGCCAAACCCGGCTTTCAAGCTATTACACATGGATGAGTATC
CCGGAGCGCGTGGCCTTGGAAGCAGAGATTATTCGCAAGTGCTTGTCGCG
GTCCGAATTGCAGTGTCAATTCATCGAGTACCGGGGGCATAAGGTCATAT
ACCGGCGGTACGCATCACTCTTCTTCATTGTTGGCGTGGACGGGGATGAT
GTCGCGGCCGGCGGTGGGGATGGGAATGCGGGGGGGGGAGGGGAGAATGA
GCTGGGCATTTTGGAGTTCATTCATGCGTTAGTGGAGACGTTGGACAAGT
ACTTTGAGAGCGTCTGCGAGCTCGACATCATGTTCAATTTAGAAAAGGCA
CACTTCATTGTGGATGAGATGGTTGGTAATGGCTATATTGTGGACACTAA
CAAGGCCAATGTTCTGAAGCCTATCCATCTCATGGAGAAGGCTAGTGCAA
GCGAGGAGTCTATTTTCTCGAGAAGAGGGTGA

protein sequence of NO02G03410.1

>NO02G03410.1-protein ID=NO02G03410.1-protein|Name=NO02G03410.1|organism=Nannochloropsis oceanica|type=polypeptide|length=535bp
MVHLVPFIFNLFLGAHLCRAARISAGYEGEQQRLTLQCTYAETARVQLAA
RALGMCLDVKIDDVKEALFLQKQHGNLLGGIDLDQITTCLQAQKEEKFVL
SAACREELARFDEKASLHDGSPASKIASIFRDHPDEMCACIEAIDVSEIS
CEGWGVMPAIHNVTQSCGLLHGSPVLTPSKDFPVQQQRQQHQHPEQPDQE
QQDRQSAPATIDGPPLPPASQPSHRLDPQFGGEEGILGNFREPYHPDERT
QHTMYCYEAAVHLCPQARGAQNPLIFQKCVERAVRQGKLGGECLIVLKEV
NIDALALQEIQGLLGRHEIPLDADQLQAAKARLGVAFGGARRTIQLAATF
CHASAPAPAQASSLGNMIKFILFVNKQGQTRLSSYYTWMSIPERVALEAE
IIRKCLSRSELQCQFIEYRGHKVIYRRYASLFFIVGVDGDDVAAGGGDGN
AGGGGENELGILEFIHALVETLDKYFESVCELDIMFNLEKAHFIVDEMVG
NGYIVDTNKANVLKPIHLMEKASASEESIFSRRG*

Synonyms

Publications