NO02G02900, NO02G02900 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO02G02900 vs. NCBI_GenBank
Match: CBN75495.1 (20S proteasome beta 5 subunit [Ectocarpus siliculosus]) HSP 1 Score: 245.4 bits (625), Expect = 2.500e-61 Identity = 124/216 (57.41%), Postives = 159/216 (73.61%), Query Frame = 0 Query: 101 HGTTTCAFVFDHGILVAVDSRASMGSYIGSSATEKVLPVSQHILATMAGGAADCAFWIRHLAMQARLYEIENEGQQLTVRRASKLLANNIARFLGK-LSMGTMVLGHD---------------SQEGFSIYYVDNDGTRSKGKLFAVGSGSTYAYSILDAGYRPEMSVEEAKELGLRAIRHATYRDAFSGGFVNVYLVQASGWRRIARVDGGFLSV 301 HGTTT A V D G++ AVDSRASMGS++GS T+KV+PVSQHIL TMAGGAADC FW+R+L MQA+++E N G Q+ V A+++LA+ + GK LS+GTM++GHD +Q G ++YVD+DG R KG+ F+VGSGSTYAYS+LD GYR MS+EEA +L RA+RHATYRDAFSGGF+NV++V ASGW R+ D GFL + Sbjct: 34 HGTTTVALVCDGGVIAAVDSRASMGSFVGSRTTQKVIPVSQHILGTMAGGAADCTFWLRYLGMQAKVFEDRN-GFQMPVATAARVLADALLGQRGKGLSVGTMIMGHDRGNRDSSGRGSVSGGNQGGGQLFYVDSDGARVKGRYFSVGSGSTYAYSVLDEGYRDGMSLEEAADLAKRAVRHATYRDAFSGGFINVFVVDASGWTRLDVDDSGFLDL 248
BLAST of NO02G02900 vs. NCBI_GenBank
Match: XP_001421201.1 (predicted protein [Ostreococcus lucimarinus CCE9901] >ABO99494.1 predicted protein [Ostreococcus lucimarinus CCE9901]) HSP 1 Score: 230.7 bits (587), Expect = 6.300e-57 Identity = 119/199 (59.80%), Postives = 152/199 (76.38%), Query Frame = 0 Query: 101 HGTTTCAFVFDHGILVAVDSRASMGSYIGSSATEKVLPVSQHILATMAGGAADCAFWIRHLAMQARLYEIENEGQQLTVRRASKLLANNIARFLGK-LSMGTMVLGHDSQEGFSIYYVDNDGTRSKGKLFAVGSGSTYAYSILDAGYRPEMSVEEAKELGLRAIRHATYRDAFSGGFVNVYLVQASGWRRIARVDGGFL 299 HGTTT AF+F+HGI+VAVDSRAS G YI S +KV+ ++ +L TMAGGAADC FW R+L +Q RL+E+EN G+++TVR ASKLLAN + + GK LSMGTMV G D G +YYVD++GTR KG+ F+VGSGS +AY +LD GY+ +++VEEA ELG RAI HAT+RDAFSGG V+VY V A+GW ++ D G L Sbjct: 63 HGTTTLAFIFEHGIVVAVDSRASQGPYISSQTVKKVIEINPFLLGTMAGGAADCQFWQRNLGIQCRLHELEN-GKRITVRAASKLLANTLYSYKGKGLSMGTMVAGWD-LNGPGLYYVDSEGTRLKGQRFSVGSGSLFAYGVLDQGYKWDLTVEEACELGRRAIYHATFRDAFSGGTVSVYHVGANGWTKVTGDDVGEL 259
BLAST of NO02G02900 vs. NCBI_GenBank
Match: XP_003083185.1 (Proteasome B-type subunit [Ostreococcus tauri] >CAL57460.1 Proteasome B-type subunit [Ostreococcus tauri] >OUS49107.1 20S proteasome, regulatory subunit beta type PSMB3/PUP3 [Ostreococcus tauri]) HSP 1 Score: 228.0 bits (580), Expect = 4.100e-56 Identity = 123/239 (51.46%), Postives = 169/239 (70.71%), Query Frame = 0 Query: 62 DKAGMGVRSSLHVALSSYQEQQVGETHIARSKLLD-DHVFHGTTTCAFVFDHGILVAVDSRASMGSYIGSSATEKVLPVSQHILATMAGGAADCAFWIRHLAMQARLYEIENEGQQLTVRRASKLLANNIARFLGK-LSMGTMVLGHDSQEGFSIYYVDNDGTRSKGKLFAVGSGSTYAYSILDAGYRPEMSVEEAKELGLRAIRHATYRDAFSGGFVNVYLVQASGWRRIARVDGGFL 299 D+A GV +S+H S++ V + + ++++ HGTTT F+F+HGI++AVDSRAS G YI S +KV+ ++ +L TMAGGAADC FW R+L +Q RL+E+EN G+++TVR ASKLLAN + + G+ LSMGTM+ G D G +YYVD++GTR KG+ F+VGSGS +AY +LD GYR ++SV+EA ELG RAI HAT+RDAFSGG V+VY V +GW ++ D G L Sbjct: 24 DEALQGVSNSVHA--SNFTAPAVEDFDAFQREVINYVKPAHGTTTLGFIFEHGIVIAVDSRASQGPYISSQTVKKVIEINPFLLGTMAGGAADCQFWQRNLGIQCRLHELEN-GKRITVRAASKLLANTLYSYKGRGLSMGTMIAGWD-LNGPGLYYVDSEGTRLKGQRFSVGSGSLFAYGVLDQGYRWDLSVKEACELGRRAIYHATFRDAFSGGTVSVYHVGKNGWTKVTGDDVGEL 258
BLAST of NO02G02900 vs. NCBI_GenBank
Match: XP_005707411.1 (20S proteasome subunit beta 5 [Galdieria sulphuraria] >EME30891.1 20S proteasome subunit beta 5 [Galdieria sulphuraria]) HSP 1 Score: 228.0 bits (580), Expect = 4.100e-56 Identity = 110/198 (55.56%), Postives = 153/198 (77.27%), Query Frame = 0 Query: 101 HGTTTCAFVFDHGILVAVDSRASMGSYIGSSATEKVLPVSQHILATMAGGAADCAFWIRHLAMQARLYEIENEGQQLTVRRASKLLANNIARFLGK-LSMGTMVLGHDSQEGFSIYYVDNDGTRSKGKLFAVGSGSTYAYSILDAGYRPEMSVEEAKELGLRAIRHATYRDAFSGGFVNVYLVQASGWRRIARVDGGF 298 HGTTT +F+F GI+ AVDSRASMG YIGS + +KV+ +++++L TMAGGAADC FW R+L M+ R++E++N+ ++++V ASK+L N + ++ G LSMGTM++G D ++G IYYVD++GTR KG F+VGSGST+A +LD GY+ MSVEEA ELG R+I HAT+RDAFSGG++NVY + GW+ I+ D GF Sbjct: 57 HGTTTLSFIFSEGIVAAVDSRASMGQYIGSGSVKKVIEINKYLLGTMAGGAADCTFWERYLGMRCRIFELKNK-ERISVAAASKILCNTVYQYKGMGLSMGTMIMGWD-KKGPHIYYVDSEGTRLKGSKFSVGSGSTHALGVLDQGYKWNMSVEEACELGRRSIYHATHRDAFSGGYINVYYIGPDGWKFISHEDSGF 252
BLAST of NO02G02900 vs. NCBI_GenBank
Match: XP_002506817.1 (predicted protein [Micromonas commoda] >ACO68075.1 predicted protein [Micromonas commoda]) HSP 1 Score: 227.6 bits (579), Expect = 5.300e-56 Identity = 114/199 (57.29%), Postives = 152/199 (76.38%), Query Frame = 0 Query: 101 HGTTTCAFVFDHGILVAVDSRASMGSYIGSSATEKVLPVSQHILATMAGGAADCAFWIRHLAMQARLYEIENEGQQLTVRRASKLLANNIARFLGK-LSMGTMVLGHDSQEGFSIYYVDNDGTRSKGKLFAVGSGSTYAYSILDAGYRPEMSVEEAKELGLRAIRHATYRDAFSGGFVNVYLVQASGWRRIARVDGGFL 299 HGTTT F+F+HG+++AVDSRAS G YI S +KV+ ++ ++L TMAGGAADC FW R+L +Q RL+E+EN G++++V ASKLLAN + + G+ LSMGTMV G D +G +YYVD+DGTR KG+ F+VGSGS +AY +LD GYR ++SVEEA ELG RAI HAT+RDAFSGG ++VY V +GW +++ D G L Sbjct: 61 HGTTTLGFIFEHGVVIAVDSRASQGPYISSQTVKKVIEINPYLLGTMAGGAADCQFWQRNLGIQCRLHELEN-GKRISVAGASKLLANTLYGYRGQGLSMGTMVAGWD-LKGPGLYYVDSDGTRLKGQRFSVGSGSLFAYGVLDQGYRWDLSVEEACELGRRAIYHATFRDAFSGGTISVYHVNENGWTKVSGTDVGEL 257
BLAST of NO02G02900 vs. NCBI_GenBank
Match: EJK64564.1 (hypothetical protein THAOC_14691, partial [Thalassiosira oceanica]) HSP 1 Score: 227.6 bits (579), Expect = 5.300e-56 Identity = 108/196 (55.10%), Postives = 152/196 (77.55%), Query Frame = 0 Query: 101 HGTTTCAFVFDHGILVAVDSRASMGSYIGSSATEKVLPVSQHILATMAGGAADCAFWIRHLAMQARLYEIENEGQQLTVRRASKLLANNIARF--LGKLSMGTMVLGHDSQEGFSIYYVDNDGTRSKGKLFAVGSGSTYAYSILDAGYRPEMSVEEAKELGLRAIRHATYRDAFSGGFVNVYLVQASGWRRIARVD 295 HGTTT +FVF G++ AVDSRAS+G+++GS +KVLPVS IL TMAGGAADC+FWIR L QARL+E++N+ + ++V R+S++L+N + ++ LG LS+G+M++G+D++EGFSIYYVDN G R +G++F+VGSGST+A ILD R +M+ EA LG++AIRHAT RDA SGG++ VYL+ GW ++ D Sbjct: 1332 HGTTTLSFVFQGGVIAAVDSRASIGNFVGSKTVQKVLPVSSSILGTMAGGAADCSFWIRFLRQQARLHEVQNK-RSMSVARSSRILSNALYQYRGLGDLSVGSMIMGYDAREGFSIYYVDNTGARIRGEVFSVGSGSTFALGILDTELRYDMTEAEAISLGIKAIRHATARDAMSGGYIGVYLITKEGWAKVYSED 1526
BLAST of NO02G02900 vs. NCBI_GenBank
Match: XP_005851025.1 (hypothetical protein CHLNCDRAFT_56983 [Chlorella variabilis] >EFN58923.1 hypothetical protein CHLNCDRAFT_56983 [Chlorella variabilis]) HSP 1 Score: 227.3 bits (578), Expect = 6.900e-56 Identity = 117/199 (58.79%), Postives = 146/199 (73.37%), Query Frame = 0 Query: 101 HGTTTCAFVFDHGILVAVDSRASMGSYIGSSATEKVLPVSQHILATMAGGAADCAFWIRHLAMQARLYEIENEGQQLTVRRASKLLANNIARFLGK-LSMGTMVLGHDSQEGFSIYYVDNDGTRSKGKLFAVGSGSTYAYSILDAGYRPEMSVEEAKELGLRAIRHATYRDAFSGGFVNVYLVQASGWRRIARVDGGFL 299 HGTTT F+F G+++AVDSRAS GSYI S +KV+ ++ H+L TMAGGAADC FW R+L Q RLYE+ N G+++TVR ASKLLAN + + G LSMGTMV G D + G +YYVD+DG R+KGKLF+VGSGS YAY +LD GYR ++SVEEA ELG R+I HAT+RDA SGG V+ Y V GW ++ D G L Sbjct: 58 HGTTTLGFIFQGGVIIAVDSRASQGSYISSQTVKKVIEINPHLLGTMAGGAADCQFWERNLGRQCRLYELAN-GKRITVRGASKLLANTMFSYRGMGLSMGTMVAGWD-EAGPGLYYVDSDGQRTKGKLFSVGSGSLYAYGVLDEGYRWDLSVEEAVELGQRSIYHATFRDAASGGTVSAYHVTQEGWTKVRGEDVGQL 254
BLAST of NO02G02900 vs. NCBI_GenBank
Match: XP_004347536.2 (hypothetical protein CAOG_04785 [Capsaspora owczarzaki ATCC 30864] >KJE94093.1 hypothetical protein CAOG_004785 [Capsaspora owczarzaki ATCC 30864]) HSP 1 Score: 226.5 bits (576), Expect = 1.200e-55 Identity = 114/198 (57.58%), Postives = 150/198 (75.76%), Query Frame = 0 Query: 98 HVFHGTTTCAFVFDHGILVAVDSRASMGSYIGSSATEKVLPVSQHILATMAGGAADCAFWIRHLAMQARLYEIENEGQQLTVRRASKLLANNIARFLGK-LSMGTMVLGHDSQEGFSIYYVDNDGTRSKGKLFAVGSGSTYAYSILDAGYRPEMSVEEAKELGLRAIRHATYRDAFSGGFVNVYLVQASGWRRIARVD 295 H+ HGTTT AF F HGI+VAVDSRA+ GSYI S +KV+ ++ ++L TMAGGAADC+FW R LA + R+YE+ N+ ++++V ASKLLAN + + LSMGTM+ G D + G +YYVD+DGTR G +F+VGSGSTYAY +LDAG+R +M+ EEA ELG R+I HAT+RDA+SGGFVNVY V+ GW +I+ D Sbjct: 96 HIQHGTTTLAFKFKHGIIVAVDSRATGGSYIASGTVKKVIEINPYLLGTMAGGAADCSFWERELARRCRIYELRNK-ERISVAAASKLLANMVYGYKNMGLSMGTMITGWD-KRGPELYYVDSDGTRLHGDMFSVGSGSTYAYGVLDAGFRYDMTPEEACELGRRSIYHATHRDAYSGGFVNVYHVREEGWVKISSTD 291
BLAST of NO02G02900 vs. NCBI_GenBank
Match: XP_023693472.1 (proteasome subunit beta type-5-like [Paramormyrops kingsleyae]) HSP 1 Score: 225.7 bits (574), Expect = 2.000e-55 Identity = 114/195 (58.46%), Postives = 148/195 (75.90%), Query Frame = 0 Query: 101 HGTTTCAFVFDHGILVAVDSRASMGSYIGSSATEKVLPVSQHILATMAGGAADCAFWIRHLAMQARLYEIENEGQQLTVRRASKLLANNIARFLGK-LSMGTMVLGHDSQEGFSIYYVDNDGTRSKGKLFAVGSGSTYAYSILDAGYRPEMSVEEAKELGLRAIRHATYRDAFSGGFVNVYLVQASGWRRIARVD 295 HGTTT AF F HG++VAVDSRA+ GSYI S +KV+ ++ ++L TMAGGAADC+FW R LA Q R+YE+ N+ ++++V ASKLLAN + ++ G LSMGTMV G D + G +YYVD++G R G LFAVGSGS YAY ++D+G RPE+SVEEA ELG RAI ATYRDA+SGG VN+Y V + GW R+++ D Sbjct: 67 HGTTTLAFKFQHGVIVAVDSRATAGSYIASQTVKKVIEINPYLLGTMAGGAADCSFWERLLARQCRVYELRNK-ERISVAAASKLLANMVYQYKGMGLSMGTMVCGWD-KRGPGLYYVDSEGNRVGGDLFAVGSGSMYAYGVVDSGLRPELSVEEACELGRRAIYQATYRDAYSGGVVNLYRVHSQGWERVSQDD 259
BLAST of NO02G02900 vs. NCBI_GenBank
Match: XP_003061052.1 (predicted protein [Micromonas pusilla CCMP1545] >EEH54702.1 predicted protein [Micromonas pusilla CCMP1545]) HSP 1 Score: 224.9 bits (572), Expect = 3.400e-55 Identity = 114/199 (57.29%), Postives = 150/199 (75.38%), Query Frame = 0 Query: 101 HGTTTCAFVFDHGILVAVDSRASMGSYIGSSATEKVLPVSQHILATMAGGAADCAFWIRHLAMQARLYEIENEGQQLTVRRASKLLANNIARFLGK-LSMGTMVLGHDSQEGFSIYYVDNDGTRSKGKLFAVGSGSTYAYSILDAGYRPEMSVEEAKELGLRAIRHATYRDAFSGGFVNVYLVQASGWRRIARVDGGFL 299 HGTTT F+F+HG+++AVDSRAS G YI S +KV+ ++ ++L TMAGGAADC FW R+L +Q RL+E+EN G++++V ASKLL+N + + G+ LSMGTMV G D G +YYVD+DGTR KGK F+VGSGS +AY +LD GYR ++SVE+A ELG RAI HAT+RDAFSGG V+VY V GW +++ D G L Sbjct: 58 HGTTTLGFIFEHGVVIAVDSRASQGPYISSQTVKKVIEINPYLLGTMAGGAADCQFWQRNLGIQCRLHELEN-GKRISVSGASKLLSNTLYGYRGQGLSMGTMVAGWD-LNGPGLYYVDSDGTRLKGKRFSVGSGSLFAYGVLDQGYRWDLSVEDACELGRRAIYHATFRDAFSGGTVSVYHVGPDGWTKMSGTDVGEL 254 The following BLAST results are available for this feature:
BLAST of NO02G02900 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO02G02900 ID=NO02G02900|Name=NO02G02900|organism=Nannochloropsis oceanica|type=gene|length=2306bpback to top protein sequence of NO02G02900.2 >NO02G02900.2-protein ID=NO02G02900.2-protein|Name=NO02G02900.2|organism=Nannochloropsis oceanica|type=polypeptide|length=245bpback to top protein sequence of NO02G02900.1 >NO02G02900.1-protein ID=NO02G02900.1-protein|Name=NO02G02900.1|organism=Nannochloropsis oceanica|type=polypeptide|length=319bpback to top Synonyms
Publications
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