NO02G02850, NO02G02850 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO02G02850 vs. NCBI_GenBank
Match: EWM30415.1 (Golgi apparatus membrane protein TVP15 [Nannochloropsis gaditana]) HSP 1 Score: 308.1 bits (788), Expect = 2.600e-80 Identity = 168/229 (73.36%), Postives = 188/229 (82.10%), Query Frame = 0 Query: 1 MSDNGGFNPFAPRSGAGGGPGTVTGSKSTSPSTVHEPSWLKGASISSNPVATAQSASHVPIQPATLQPQAAAAAPAQQQPSGQTPQLVVYMRVANFGLCILMSAAAILTVIVPAGATPASWVLAFYVLAFSCLLCCFEFNIRQVAKHIANNFGFLYDAKSRATFLVFVGVLCFSLGVTGKIAGAAMIANALFNTFVLCKYPQYATNAPATTANQEAAGWLRRNPAVAQK 230 MS +G NPFA +SG GGPG ++ SP EP+WL A+ +S P A +SHVPIQPATLQPQAA PSGQTP LV+YMRVANF LCILMSAAA+LTVIVPAGATPASWVLAFYVLAFSCLLCCFE N+R+VAKHIANNFGFLYDAKSRATFL+FVGVLCFSLG+TGK+AGAAMIANALFNT VLCKYPQYATNAP TTA QEAA +++RNP +A+K Sbjct: 1 MSGSGEVNPFATQSGGDGGPG-AGRNRPPSPPRADEPAWL-NANAASPPSPAAPHSSHVPIQPATLQPQAAT---XXXPPSGQTPPLVIYMRVANFALCILMSAAAVLTVIVPAGATPASWVLAFYVLAFSCLLCCFEVNLRRVAKHIANNFGFLYDAKSRATFLIFVGVLCFSLGITGKVAGAAMIANALFNTVVLCKYPQYATNAPTTTAEQEAAQFMQRNPGLARK 224
BLAST of NO02G02850 vs. NCBI_GenBank
Match: CBN77990.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 124.8 bits (312), Expect = 4.000e-25 Identity = 77/167 (46.11%), Postives = 104/167 (62.28%), Query Frame = 0 Query: 68 PQAAAAAP--AQQQPSGQTPQLVVYMRVANFGLCILMSAAAILTVIVPAGATPASWVLAFYVLAFSCLLCCFEFNIRQVAKHIANNFGFLYDAKSRATFLVFVGVLCFSLGV-TGKIAGAAMIANALFNTFVLCKYPQYATNAPATTANQEAAGWLRRNPAVAQKVG 232 PQ AAAAP A+ + + PQL++YMRVAN LC +++A A+L ++ AG A VLA Y+ AFS FE +++ VAK IA NFGFLY+AK RA FL+FVGVLCFSL +AGA M+ NA+FN +V+ KYP++ + E +LR N + G Sbjct: 33 PQQAAAAPTAAELERQAKVPQLMIYMRVANIALCGILAATAVLK-LIGAGVDVAGAVLACYLCAFSXXXXXFETHLKVVAKTIAANFGFLYNAKGRAVFLIFVGVLCFSLNSDIAFVAGALMMVNAVFNFYVIFKYPEFERDLQRKDLESEGRDYLRANRGALAQAG 198
BLAST of NO02G02850 vs. NCBI_GenBank
Match: XP_008908723.1 (hypothetical protein PPTG_13987 [Phytophthora parasitica INRA-310] >ETI42484.1 hypothetical protein F443_12393 [Phytophthora parasitica P1569] >ETK82507.1 hypothetical protein L915_12115 [Phytophthora parasitica] >ETL35891.1 hypothetical protein L916_12040 [Phytophthora parasitica] >ETL89125.1 hypothetical protein L917_11881 [Phytophthora parasitica] >ETM42383.1 hypothetical protein L914_11951 [Phytophthora parasitica] >ETN06221.1 hypothetical protein PPTG_13987 [Phytophthora parasitica INRA-310] >ETO71129.1 hypothetical protein F444_12493 [Phytophthora parasitica P1976] >ETP12223.1 hypothetical protein F441_12379 [Phytophthora parasitica CJ01A1] >ETP40329.1 hypothetical protein F442_12316 [Phytophthora parasitica P10297] >KUF85179.1 hypothetical protein AM588_10000831 [Phytophthora nicotianae] >KUF99667.1 hypothetical protein AM587_10002530 [Phytophthora nicotianae] >KUG00670.1 hypothetical protein AM587_10002258 [Phytophthora nicotianae]) HSP 1 Score: 90.9 bits (224), Expect = 6.400e-15 Identity = 56/158 (35.44%), Postives = 84/158 (53.16%), Query Frame = 0 Query: 83 QTPQLVVYMRVANFGLCILMSAAAILTVIVPAGATPASWVLAFYVLAFSCLLCCFEFNIRQVAKHIANNFGFLYDAKSRATFLVFVGVLCFSLG-VTGKIAGAAMIANALFNTFVLCKYPQYATNAPA--------TTANQEAAGWLRRNPAVAQKVG 232 + P+L+ YMR+ N G IL A I+ + +++ YV+ F L FE + ++ I +NFGFLY K RA F+ F+G L F +G IAG M NA N V+C++PQ+ + A TT++QEAA ++ +NP +A K G Sbjct: 39 ELPKLLRYMRLGNVGCSILQIIAGIVGITSFITLNITGTLVSIYVIMFGILFLLFECRLSRMETAIRSNFGFLYSYKGRAAFIFFIGFLDFGIGSALATIAGVLMCFNAFINLLVMCRHPQFKSTLSADADPTAGYTTSSQEAANFMSKNPELAAKAG 196
BLAST of NO02G02850 vs. NCBI_GenBank
Match: XP_002895560.1 (conserved hypothetical protein [Phytophthora infestans T30-4] >XP_002895695.1 conserved hypothetical protein [Phytophthora infestans T30-4] >EEY55122.1 conserved hypothetical protein [Phytophthora infestans T30-4] >EEY55851.1 conserved hypothetical protein [Phytophthora infestans T30-4]) HSP 1 Score: 90.9 bits (224), Expect = 6.400e-15 Identity = 55/158 (34.81%), Postives = 84/158 (53.16%), Query Frame = 0 Query: 83 QTPQLVVYMRVANFGLCILMSAAAILTVIVPAGATPASWVLAFYVLAFSCLLCCFEFNIRQVAKHIANNFGFLYDAKSRATFLVFVGVLCFSLG-VTGKIAGAAMIANALFNTFVLCKYPQYATNAPA--------TTANQEAAGWLRRNPAVAQKVG 232 + P+L+ YMR+ N G IL A ++ + +++ YV+ F L FE + ++ I +NFGFLY K RA F+ F+G L F +G IAG M NA N V+C++PQ+ + A TT++QEAA ++ +NP +A K G Sbjct: 39 ELPKLLRYMRLGNVGCSILQIIAGVVGITSFITLNITGTLVSIYVIMFGILFLLFECRLSRMETAIRSNFGFLYSYKGRAAFIFFIGFLDFGIGSALATIAGVLMCFNAFINLLVMCRHPQFKSTLSADADPTAGYTTSSQEAANFMNKNPELAAKAG 196
BLAST of NO02G02850 vs. NCBI_GenBank
Match: XP_009530670.1 (hypothetical protein PHYSODRAFT_511445 [Phytophthora sojae] >EGZ13241.1 hypothetical protein PHYSODRAFT_511445 [Phytophthora sojae]) HSP 1 Score: 90.5 bits (223), Expect = 8.400e-15 Identity = 55/158 (34.81%), Postives = 84/158 (53.16%), Query Frame = 0 Query: 83 QTPQLVVYMRVANFGLCILMSAAAILTVIVPAGATPASWVLAFYVLAFSCLLCCFEFNIRQVAKHIANNFGFLYDAKSRATFLVFVGVLCFSLG-VTGKIAGAAMIANALFNTFVLCKYPQYATNAPA--------TTANQEAAGWLRRNPAVAQKVG 232 + P+L+ YMR+ N G IL A ++ + +++ YV+ F L FE + ++ I +NFGFLY K RA F+ F+G L F +G IAG M NA N V+C++PQ+ ++ A TT +QEAA ++ +NP +A K G Sbjct: 39 ELPKLLRYMRLGNVGCSILQIIAGVVGITSFITLNITGTLVSIYVIMFGILFLLFECRLSRMETAIRSNFGFLYSYKGRAAFIFFIGFLDFGIGSALATIAGVLMCFNAFINLLVMCRHPQFKSSLSADADPTAGYTTGSQEAANFMSKNPELAAKAG 196
BLAST of NO02G02850 vs. NCBI_GenBank
Match: XP_009837082.1 (hypothetical protein H257_11759 [Aphanomyces astaci] >ETV73656.1 hypothetical protein H257_11759 [Aphanomyces astaci]) HSP 1 Score: 90.1 bits (222), Expect = 1.100e-14 Identity = 58/159 (36.48%), Postives = 83/159 (52.20%), Query Frame = 0 Query: 83 QTPQLVVYMRVANFGLCILMSAAAILTVIVPAGATPASWVLAFYVLAFSCLLCCFEFNIRQVAKHIANNFGFLYDAKSRATFLVFVGVLCFSLGVT-GKIAGAAMIANALFNTFVLCKYPQY------ATNAPA---TTANQEAAGWLRRNPAVAQKVG 232 + P+++ MRV N G +L A I +I +++ YV+ F L FE + + I NFGFLY K RA F+ F+G L F + T G +AG M NAL N F++C++P++ A+ P TT NQEAA +L NP VA + G Sbjct: 30 ELPKVLRLMRVCNVGCSLLQIIAGITGLISIVTLNITGGLVSVYVITFGLLFLLFECRLTSMETRIRRNFGFLYSYKGRAGFIFFIGFLDFGMNTTLGTVAGVFMCCNALLNLFIMCQHPEFKLGHISASADPTTGYTTGNQEAATYLSANPQVAMQAG 188
BLAST of NO02G02850 vs. NCBI_GenBank
Match: OWZ11376.1 (Golgi apparatus membrane protein TVP15 [Phytophthora megakarya]) HSP 1 Score: 89.4 bits (220), Expect = 1.900e-14 Identity = 55/158 (34.81%), Postives = 84/158 (53.16%), Query Frame = 0 Query: 83 QTPQLVVYMRVANFGLCILMSAAAILTVIVPAGATPASWVLAFYVLAFSCLLCCFEFNIRQVAKHIANNFGFLYDAKSRATFLVFVGVLCFSLG-VTGKIAGAAMIANALFNTFVLCKYPQYATNAPA--------TTANQEAAGWLRRNPAVAQKVG 232 + P+L+ YMR+ N G IL A I+ + +++ YV+ F L FE + ++ I +NFGFLY K RA F+ F+G L F +G IAG M NA N V+C++P++ + A TT++QEAA ++ +NP +A K G Sbjct: 39 ELPKLLRYMRLGNVGCSILQIIAGIVGITSFITLNITGTLVSIYVIMFGILFLLFECRLSRMETAIRSNFGFLYSYKGRAAFIFFIGFLDFGIGSALATIAGVLMCFNAFINLLVMCRHPEFKSTLGADSDPTAGYTTSSQEAANFMSKNPELAAKAG 196
BLAST of NO02G02850 vs. NCBI_GenBank
Match: CCD28252.1 (golgi apparatus membrane protein TVP15, partial [Plasmopara viticola]) HSP 1 Score: 89.0 bits (219), Expect = 2.400e-14 Identity = 54/158 (34.18%), Postives = 84/158 (53.16%), Query Frame = 0 Query: 83 QTPQLVVYMRVANFGLCILMSAAAILTVIVPAGATPASWVLAFYVLAFSCLLCCFEFNIRQVAKHIANNFGFLYDAKSRATFLVFVGVLCFSLG-VTGKIAGAAMIANALFNTFVLCKYPQYATNAPA--------TTANQEAAGWLRRNPAVAQKVG 232 + P+L+ YMR+ N G I+ A I+ + +++ YV+ F L FE + ++ I +NFGFLY K RA F+ F+G L F +G IAG M NA N V+C++P++ + A TT++QEAA ++ +NP +A K G Sbjct: 38 ELPKLLRYMRLGNVGCSIIQIIAGIVGITSFITLNITGTLVSIYVIMFGILFLLFECRLSRMETAIRSNFGFLYSYKGRAAFIFFIGFLDFGIGSALATIAGVFMCMNAFINLLVMCRHPEFKSTLSADADPTAGYTTSSQEAASFMSKNPELAAKAG 195
BLAST of NO02G02850 vs. NCBI_GenBank
Match: XP_024579903.1 (Golgi apparatus membrane protein TVP15 [Plasmopara halstedii] >CEG43534.1 Golgi apparatus membrane protein TVP15 [Plasmopara halstedii]) HSP 1 Score: 89.0 bits (219), Expect = 2.400e-14 Identity = 54/158 (34.18%), Postives = 84/158 (53.16%), Query Frame = 0 Query: 83 QTPQLVVYMRVANFGLCILMSAAAILTVIVPAGATPASWVLAFYVLAFSCLLCCFEFNIRQVAKHIANNFGFLYDAKSRATFLVFVGVLCFSLG-VTGKIAGAAMIANALFNTFVLCKYPQYATNAPA--------TTANQEAAGWLRRNPAVAQKVG 232 + P+L+ YMR+ N G I+ A I+ + +++ YV+ F L FE + ++ I +NFGFLY K RA F+ F+G L F +G IAG M NA N V+C++P++ + A TT++QEAA ++ +NP +A K G Sbjct: 38 ELPKLLRYMRLGNVGCSIIQIIAGIVGITSFITLNITGTLVSIYVIMFGILFLLFECRLSRMETAIRSNFGFLYSYKGRAAFIFFIGFLDFGIGSALATIAGVLMCFNAFINLLVMCRHPEFKSTLSADADPTAGYTTSSQEAASFMSKNPELAAKAG 195
BLAST of NO02G02850 vs. NCBI_GenBank
Match: XP_008876454.1 (hypothetical protein H310_11524 [Aphanomyces invadans] >ETV94863.1 hypothetical protein H310_11524 [Aphanomyces invadans]) HSP 1 Score: 88.6 bits (218), Expect = 3.200e-14 Identity = 59/179 (32.96%), Postives = 88/179 (49.16%), Query Frame = 0 Query: 63 PATLQPQAAAAAPAQQQPSGQTPQLVVYMRVANFGLCILMSAAAILTVIVPAGATPASWVLAFYVLAFSCLLCCFEFNIRQVAKHIANNFGFLYDAKSRATFLVFVGVLCFSLGVT-GKIAGAAMIANALFNTFVLCKYPQYAT---------NAPATTANQEAAGWLRRNPAVAQKVG 232 P + + AA + + P+++ MRV N G +L A I +I +++ YV+ F L FE + + I NFGFLY K RA F+ F+G L F + T G +AG M NAL N F++C++P++ + + TT NQEAA +L NP VA + G Sbjct: 8 PPASPSKTSIAARINNVKTMELPKVLRLMRVCNVGCSLLQVIAGITGLISIVTLNVTGGLVSVYVITFGLLFLLFECRLSSMETRIRRNFGFLYSYKGRAAFIFFIGFLDFGMNTTLGTVAGVFMCCNALLNLFIMCQHPEFKSGHISASADPTSGYTTGNQEAAAYLNANPHVAMQAG 186 The following BLAST results are available for this feature:
BLAST of NO02G02850 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO02G02850 ID=NO02G02850|Name=NO02G02850|organism=Nannochloropsis oceanica|type=gene|length=1243bpback to top protein sequence of NO02G02850.1 >NO02G02850.1-protein ID=NO02G02850.1-protein|Name=NO02G02850.1|organism=Nannochloropsis oceanica|type=polypeptide|length=265bpback to top Synonyms
Publications
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