NO02G02840, NO02G02840 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO02G02840 vs. NCBI_GenBank
Match: EWM30408.1 (Hypoxia induced protein, domain protein [Nannochloropsis gaditana]) HSP 1 Score: 121.7 bits (304), Expect = 1.100e-24 Identity = 69/141 (48.94%), Postives = 74/141 (52.48%), Query Frame = 0 Query: 3 TFWSRLWDKTKKDPLIPIGCTATLGCLSAGLYAFKSGE-------------------------------------------------------------KHLSQKMMRARVVAQGFTVAVLMAGAFYNSNIKAIQEPARGR 83 TFWSRLWDKTKKDPLIPIGCTATLGCL AGLYAFKSGE KHLSQ+MMRARV+AQGFT+ VLMAG+FYN NIK+ EPAR R Sbjct: 4 TFWSRLWDKTKKDPLIPIGCTATLGCLGAGLYAFKSGEVRDARPGNQFKAGFELLWLVKRQRSGCAPDRSRQTHSSFPAGKTIWRPRCTRIHIVLIPTQKHLSQRMMRARVLAQGFTIVVLMAGSFYNMNIKSSGEPARER 144
BLAST of NO02G02840 vs. NCBI_GenBank
Match: CBN74039.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 82.0 bits (201), Expect = 9.700e-13 Identity = 38/80 (47.50%), Postives = 55/80 (68.75%), Query Frame = 0 Query: 3 TFWSRLWDKTKKDPLIPIGCTATLGCLSAGLYAFKSGEKHLSQKMMRARVVAQGFTVAVLMAGAFYNSNIKAIQEPARGR 83 +F+ +L K KK+PL+PIG AT+G L +G+Y+FK G K LSQK+MR RVVAQGFT+ V+ AG + + ++ G+ Sbjct: 10 SFFEKLAVKGKKEPLVPIGALATVGFLVSGIYSFKQGNKQLSQKLMRGRVVAQGFTILVMTAGFYMAGPPEMTRQTVEGK 89
BLAST of NO02G02840 vs. NCBI_GenBank
Match: XP_014279946.1 (HIG1 domain family member 2A, mitochondrial [Halyomorpha halys]) HSP 1 Score: 79.7 bits (195), Expect = 4.800e-12 Identity = 37/67 (55.22%), Postives = 48/67 (71.64%), Query Frame = 0 Query: 7 RLWDKTKKDPLIPIGCTATLGCLSAGLYAFKSGEKHLSQKMMRARVVAQGFTVAVLMAGAFYNSNIK 74 +L K K++PL+PIG AT GCLS GLY+F+ GE+ +SQ MMRARV AQGFTV ++ G +N K Sbjct: 38 KLIRKFKENPLVPIGALATTGCLSYGLYSFRRGERRMSQMMMRARVAAQGFTVLAIVGGLLLTANKK 104
BLAST of NO02G02840 vs. NCBI_GenBank
Match: XP_019390867.1 (PREDICTED: HIG1 domain family member 2A, mitochondrial [Crocodylus porosus]) HSP 1 Score: 76.6 bits (187), Expect = 4.100e-11 Identity = 38/84 (45.24%), Postives = 52/84 (61.90%), Query Frame = 0 Query: 4 FWSRLWDKTKKDPLIPIGCTATLGCLSAGLYAFKSGEKHLSQKMMRARVVAQGFTVAVLMAGAFYNS--NIKAIQEPARGRSPS 86 F + KT+++PL+PIGC AT G L+ GL FK G + SQ MMRAR++AQGFT+A LM G + + K Q G +P+ Sbjct: 23 FSEKFMRKTRENPLVPIGCLATAGALTYGLICFKKGNRQQSQLMMRARILAQGFTIAALMVGVVTTALKSRKGSQAVGTGTAPA 106
BLAST of NO02G02840 vs. NCBI_GenBank
Match: XP_023257913.1 (HIG1 domain family member 2A, mitochondrial [Seriola lalandi dorsalis]) HSP 1 Score: 76.3 bits (186), Expect = 5.300e-11 Identity = 34/65 (52.31%), Postives = 44/65 (67.69%), Query Frame = 0 Query: 3 TFWSRLWDKTKKDPLIPIGCTATLGCLSAGLYAFKSGEKHLSQKMMRARVVAQGFTVAVLMAGAF 68 TF +L KTK++P +PIGC AT G L GL AF+ G+ H SQ +MR R+ AQGFT+ L+ G F Sbjct: 41 TFKEKLMRKTKQNPFVPIGCLATAGALMYGLRAFQQGKTHQSQLLMRGRIAAQGFTIVALLVGVF 105
BLAST of NO02G02840 vs. NCBI_GenBank
Match: XP_022607784.1 (HIG1 domain family member 2A, mitochondrial [Seriola dumerili]) HSP 1 Score: 75.9 bits (185), Expect = 7.000e-11 Identity = 34/65 (52.31%), Postives = 44/65 (67.69%), Query Frame = 0 Query: 3 TFWSRLWDKTKKDPLIPIGCTATLGCLSAGLYAFKSGEKHLSQKMMRARVVAQGFTVAVLMAGAF 68 TF +L KTK++P +PIGC AT G L GL AF+ G+ H SQ +MR R+ AQGFT+ L+ G F Sbjct: 41 TFKEKLMRKTKQNPFVPIGCLATAGALIYGLRAFQQGKTHQSQLLMRGRIAAQGFTIVALLVGVF 105
BLAST of NO02G02840 vs. NCBI_GenBank
Match: XP_001649065.1 (HIG1 domain family member 2A, mitochondrial [Aedes aegypti] >EAT44199.1 AAEL004404-PA [Aedes aegypti]) HSP 1 Score: 74.3 bits (181), Expect = 2.000e-10 Identity = 31/55 (56.36%), Postives = 42/55 (76.36%), Query Frame = 0 Query: 11 KTKKDPLIPIGCTATLGCLSAGLYAFKSGEKHLSQKMMRARVVAQGFTVAVLMAG 66 K K++PL+PIGC AT+ CL GL++F+ G + +SQ MMRAR+ AQGFTV L+ G Sbjct: 41 KVKENPLVPIGCAATISCLGYGLWSFRKGRRQMSQYMMRARIFAQGFTVVALIVG 95
BLAST of NO02G02840 vs. NCBI_GenBank
Match: XP_009011156.1 (hypothetical protein HELRODRAFT_72617 [Helobdella robusta] >ESO10887.1 hypothetical protein HELRODRAFT_72617 [Helobdella robusta]) HSP 1 Score: 74.3 bits (181), Expect = 2.000e-10 Identity = 34/71 (47.89%), Postives = 48/71 (67.61%), Query Frame = 0 Query: 3 TFWSRLWDKTKKDPLIPIGCTATLGCLSAGLYAFKSGEKHLSQKMMRARVVAQGFTVAVLMAGAFYNSNIK 74 TF ++ KT ++PL+P G AT+G L+ GLY+ K G+ LSQ+MMR RV+AQGFTV +M G + + K Sbjct: 28 TFSDKISRKTCENPLVPFGLLATIGALTIGLYSLKKGDSKLSQRMMRMRVMAQGFTVLAVMGGVYMQATKK 98
BLAST of NO02G02840 vs. NCBI_GenBank
Match: XP_001991053.1 (GH12463 [Drosophila grimshawi] >EDV99677.1 GH12463 [Drosophila grimshawi]) HSP 1 Score: 74.3 bits (181), Expect = 2.000e-10 Identity = 34/59 (57.63%), Postives = 43/59 (72.88%), Query Frame = 0 Query: 7 RLWDKTKKDPLIPIGCTATLGCLSAGLYAFKSGEKHLSQKMMRARVVAQGFTVAVLMAG 66 RL K K++PL+PIGC AT LSAGLY F++G + +SQ MMR R+ AQGFTV L+ G Sbjct: 35 RLVRKIKENPLVPIGCLATTAALSAGLYNFRTGNRKMSQLMMRTRIAAQGFTVVALIVG 93
BLAST of NO02G02840 vs. NCBI_GenBank
Match: XP_008468670.1 (PREDICTED: HIG1 domain family member 2A, mitochondrial [Diaphorina citri] >XP_017298185.1 PREDICTED: HIG1 domain family member 2A, mitochondrial [Diaphorina citri]) HSP 1 Score: 74.3 bits (181), Expect = 2.000e-10 Identity = 35/64 (54.69%), Postives = 43/64 (67.19%), Query Frame = 0 Query: 7 RLWDKTKKDPLIPIGCTATLGCLSAGLYAFKSGEKHLSQKMMRARVVAQGFTVAVLMAGAFYNS 71 +L K K++PL+PIGC AT L GLY+ K G++ LSQ MMR RVVAQGFTV L G Y + Sbjct: 38 KLIRKFKENPLVPIGCVATSAALGVGLYSMKLGDRRLSQMMMRTRVVAQGFTVLALTGGLIYTA 101 The following BLAST results are available for this feature:
BLAST of NO02G02840 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO02G02840 ID=NO02G02840|Name=NO02G02840|organism=Nannochloropsis oceanica|type=gene|length=744bpback to top protein sequence of NO02G02840.1 >NO02G02840.1-protein ID=NO02G02840.1-protein|Name=NO02G02840.1|organism=Nannochloropsis oceanica|type=polypeptide|length=86bpback to top Synonyms
Publications
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