NO02G02830, NO02G02830 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO02G02830 vs. NCBI_GenBank
Match: EWM30369.1 (tho complex subunit 5 [Nannochloropsis gaditana]) HSP 1 Score: 453.4 bits (1165), Expect = 1.100e-123 Identity = 286/600 (47.67%), Postives = 357/600 (59.50%), Query Frame = 0 Query: 4 STIRAVHEDFTGLVHQLKAAWLNDDNLALP-KGELQELVTEAAVALIEYKGLARESAVAVECCRAEMQAKKREVDERHLQLQNLLYEKDHLQRTIQTLRDFPLKELAKMEREEGVPLLPGLTEGADGEGRLLSMEEHRQNMETLRAEKETRLRLHQEHADAQTKRAALAEELSKLRDMLGTTLPRQIEELDALCRGIQERMPDIPVAVPFGGFSVDDLRALPQALFILLGRLHAYAQAFDPEESQVSVSIIACASQEQEGTLLPPSLVVVGTEAALLVSKQA--GSSGME-----VDGEEGEDGGVGTAVVTVVDTRAIKLEFSPLEGEEKMGEDV-QKDVLLFYFAMGTRELLVAAPGRHPHALVNLLPGDTGGVSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXISIAGHPMAFMWLSWLGGTSPFPPHLMDLGAAYTSTCIFNRLRVRLRAQRLLDKVLTNLNLNPREAGKEG-------GIRVGAGGAWTVASFVEVSLAAVLGEEE-EGREAG-------IRDDPFAEVSCGVHGAE-----GGGXXXEGRGGDCE----CWHDGGGGEWRRRKGR 571 +T+RAVHED LVH+LK L D N +P K E+QEL+TEAAV LIEYK +ARESA+AV CR EMQ+KK+EVD+RHLQLQNL+YEKDHLQRTIQ+LRDFP+ EL K+E +EG PLLPGLTEG G+ RLL +EEHR ++E L+ EK R++LH+EH AQTKRAAL+ E+ +LR MLGT+LPRQIEELDALC GI ER+P + +A PFGGF + ++ALP+ +++LLGRL AY QA DP + V + C ++ LP + +GTEAA L +K+A G S E+GG + +VD AI++EF PL + + E+ DVL+F+FA RELLV APGRHP ALVNLLPGDTG P +F+WL WLGGTSPFPP +DLG AYTS+CI NRLRVRLR+QR LD VL +L P + ++ G+ G W V+SF EV+ +A+ GEE EGRE G DPFAE CGV G E GG + R D E GG W R R Sbjct: 48 TTLRAVHEDLVELVHRLKGT-LGDQNSPVPGKDEMQELITEAAVTLIEYKSMARESAMAVGGCRTEMQSKKKEVDDRHLQLQNLMYEKDHLQRTIQSLRDFPMAELTKIEEDEGAPLLPGLTEG--GQVRLLPVEEHRLSLERLQEEKGARIQLHEEHVAAQTKRAALSREVDELRAMLGTSLPRQIEELDALCTGIHERIPGLSIAAPFGGFPPEQVQALPRPMYVLLGRLQAYRQAQDPAARRTRVEVFPCGDEQAP---LPQCVAALGTEAARLKAKRAQLGPSASSPXXXXXXXXAEEEGG----SLILVDQLAIRVEFPPLGPDGGLQENAGDWDVLIFFFAPEGRELLVTAPGRHPQALVNLLPGDTGA-----------DPSAAPTSHRAQGTHAGSRRLNRKRAVDTDKISGASTATFRSPPSPRSFLWLQWLGGTSPFPPEFVDLGLAYTSSCILNRLRVRLRSQRSLDGVLESLRKRPGDVPRDASSPRLFPGVEDAGVGRWLVSSFTEVTRSALSGEEPGEGREEGGGKGEDQGDTDPFAEAPCGVLGGEEGEEAGGPDEVQTRNADREGPATVRSTEGGVAWERAGAR 626
BLAST of NO02G02830 vs. NCBI_GenBank
Match: XP_005855563.1 (THO complex subunit 5, partial [Nannochloropsis gaditana CCMP526] >EKU20797.1 THO complex subunit 5, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 315.1 bits (806), Expect = 4.500e-82 Identity = 173/304 (56.91%), Postives = 221/304 (72.70%), Query Frame = 0 Query: 4 STIRAVHEDFTGLVHQLKAAWLNDDNLALP-KGELQELVTEAAVALIEYKGLARESAVAVECCRAEMQAKKREVDERHLQLQNLLYEKDHLQRTIQTLRDFPLKELAKMEREEGVPLLPGLTEGADGEGRLLSMEEHRQNMETLRAEKETRLRLHQEHADAQTKRAALAEELSKLRDMLGTTLPRQIEELDALCRGIQERMPDIPVAVPFGGFSVDDLRALPQALFILLGRLHAYAQAFDPEESQVSVSIIACASQEQEGTLLPPSLVVVGTEAALLVSKQ------AGSSGMEVDGEEGEDGG 301 +T+RAVHED LVH+LK L D N +P K E+QEL+TEAAV LIEYK +ARESA+AV CR EMQ+KK+EVD+RHLQLQNL+YEKDHLQRTIQ+LRDFP+ EL K+E +EG PLLPGLTEG G+ RLL +EEHR ++E L+ EK R++LH+EH AQTKRAAL+ E+ +LR MLGT+LPRQIEELDALC GI ER+P + +A PFGGF + ++ALP+ +++LLGRL AY QA DP + V + C ++ LP + +GTEAA L +K+ A S +GE E+ G Sbjct: 37 TTLRAVHEDLVELVHRLKGT-LGDQNSPVPGKDEMQELITEAAVTLIEYKSMARESAMAVGGCRTEMQSKKKEVDDRHLQLQNLMYEKDHLQRTIQSLRDFPMAELTKIEEDEGAPLLPGLTEG--GQVRLLPVEEHRLSLERLQEEKGARIQLHEEHVAAQTKRAALSREVDELRAMLGTSLPRQIEELDALCTGIHERIPGLSIAAPFGGFPPEQVQALPRPMYVLLGRLQAYRQAQDPAARRTRVEVFPCGDEQAP---LPQCVAALGTEAARLKAKRAQLGPSASSPSTSGEGEGAEEEG 334
BLAST of NO02G02830 vs. NCBI_GenBank
Match: XP_012196983.1 (hypothetical protein SPRG_03012 [Saprolegnia parasitica CBS 223.65] >KDO32537.1 hypothetical protein SPRG_03012 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 84.0 bits (206), Expect = 1.700e-12 Identity = 75/241 (31.12%), Postives = 114/241 (47.30%), Query Frame = 0 Query: 17 VHQLKAAWLNDDNLALPK------GELQELVTEAAVALIEYKGLARESAVAVECCRAEMQAKKREVDERHLQLQNLLYEKDHLQRTIQTLRDFPLKELAKMEREEGVPLLPGLTEGADGEGRLLSMEEHRQNMETLRAEKETRLRLHQEHADAQTKRAALAEELSKLRDMLGTTLPRQIEELDALCRGIQERMPDIPVAVPFGGFSVDDLRALPQALFILLGRLHAYAQAFDPEESQVSVS 252 V QLKAA +L LPK ++ V A + L + K R++ + E R + +K V+ HL+LQNL+YEKDHL R I+ R FP+KE+ K+E EG + G + H +++ L EKE R + ++ K AA+ E + + R L +LP +I ++ +Q + IPV D + LP AL+ L L AY QA P Q+ ++ Sbjct: 10 VGQLKAASQELRSL-LPKLIDAHDSDISPRVARALLLLQKIKSSTRDTFLETEAWRKRVADQKDLVEAHHLKLQNLMYEKDHLLREIKRCRGFPMKEMDKIEFPEGQLPVTG------------DPDMHAEHLLRLETEKEAREEVQEQQRQLHAKIAAVDEAIVEKRTFL-ESLPAEIAAIEKASEPLQALL-SIPVTT-MDVARQHDAKELPSALYTLYCELEAYMQAMGPGSLQLRIA 234
BLAST of NO02G02830 vs. NCBI_GenBank
Match: XP_008621040.1 (hypothetical protein SDRG_16602 [Saprolegnia diclina VS20] >EQC25519.1 hypothetical protein SDRG_16602 [Saprolegnia diclina VS20]) HSP 1 Score: 78.6 bits (192), Expect = 7.100e-11 Identity = 72/230 (31.30%), Postives = 107/230 (46.52%), Query Frame = 0 Query: 17 VHQLKAAWLNDDNLALPK------GELQELVTEAAVALIEYKGLARESAVAVECCRAEMQAKKREVDERHLQLQNLLYEKDHLQRTIQTLRDFPLKELAKMEREEGVPLLPGLTEGADGEGRLLSMEEHRQNMETLRAEKETRLRLHQEHADAQTKRAALAEELSKLRDMLGTTLPRQIEELDALCRGIQERMPDIPVAVPFGGFSVDDLRALPQALFILLGRLHAYAQA 241 V QLKAA + LPK ++ V A + L + K R++ + E R + +K V+ HL+LQNL+YEKDHL R I+ R FP+KE+ K+E EG + G + H +++ L EKE R + ++ K A L E + + R L +LP +I ++ +Q + IPV D + LP AL+ L L AY QA Sbjct: 10 VGQLKAA-SQELRTLLPKLIDANDSDISPRVARALLLLQKIKSSTRDTFLETEAWRKRVADQKDLVEAHHLKLQNLMYEKDHLLREIKRCRGFPMKEMDKIEFPEGQLPVTG------------DPDMHAEHLLRLETEKEAREEVQEQQRQLHAKVATLDEAVVEKRAFL-ESLPAEIAAIEKASEPLQALL-SIPVTT-MDVTRQHDAKELPSALYTLYCELEAYTQA 223
BLAST of NO02G02830 vs. NCBI_GenBank
Match: KXJ68389.1 (hypothetical protein RP20_CCG003747 [Aedes albopictus]) HSP 1 Score: 73.2 bits (178), Expect = 3.000e-9 Identity = 69/224 (30.80%), Postives = 106/224 (47.32%), Query Frame = 0 Query: 23 AWLNDDNLALPKGELQELVTEAAVALIEYKGLARESAVAVECCRAEMQAKKREVDERHLQLQNLLYEKDHLQRTIQTLRDFPLKELAKMEREEGVPLLPGLTEGADGEGR--LLSMEEHRQNMETLRAEKETRLRLHQEHADAQTKRAALAEELSKLRDMLGTTLPRQIEELDALCRGIQERMPDIPVAVPFGGFSVD-DLRALPQALFILLGRLHAYAQAFDP 244 A L DN K + E E ++A + K L R V + R + +K VD LQLQNLLYE DHL++ +Q F ++ E E VP+ + D R +EH + + L E + R L + Q +A +AEE+ + L + PR +++L A R +QE + D+P+ G+ V +R L Q L++L + AY +A DP Sbjct: 74 AALKKDNSEEAKAAIAEKRIEGSLAFVALKKLNRLDKVRIRDGREALHKEKLRVDSNRLQLQNLLYEADHLKKEVQRCYLFKSQD----EEIELVPVDEFYEKAPDTISRPEKTKEDEHARRLARLEWELQQRKELDAHCKELQASKAKIAEEIVSKTERLDSLAPR-LKDLLAATRPLQEAL-DMPIE---KGWEVQKTVRLLVQPLYMLYANVTAYGEACDP 288
BLAST of NO02G02830 vs. NCBI_GenBank
Match: OQR92509.1 (hypothetical protein THRCLA_08686, partial [Thraustotheca clavata]) HSP 1 Score: 72.4 bits (176), Expect = 5.100e-9 Identity = 60/219 (27.40%), Postives = 108/219 (49.32%), Query Frame = 0 Query: 36 ELQELVTEAAVALIEYKGLARESAVAVECCRAEMQAKKREVDERHLQLQNLLYEKDHLQRTIQTLRDFPLKELAKMEREEG-VPLLPGLTEGADGEGRLLSMEEHRQNMETLRAEKETRLRLHQEHADAQTKRAALAEELSKLRDMLGTTLPRQIEELDALCRGIQERMPDIPVAVPFGGFS---VDDLRALPQALFILLGRLHAYAQAFDPEESQVSV 251 E+ + V +A + L + KG R++ + E R + +K V+ HL+LQNL+YEKDHL R I+ R F +KE+ K++ EG +P+ + + H +++ L EKE R ++++ T+ + + E + R + +LP +I ++ R +Q + A+PF D + L L++L L AY +A D + ++V Sbjct: 77 EVSKRVPQALLLLQKIKGSTRDTFLEAEGWRKRVADQKDLVEAHHLKLQNLMYEKDHLLREIKRCRGFEMKEMDKIDFPEGQLPV-------------TVDPDMHAEHLLRLATEKEAREEMYEQQQQLNTQISEIDEATLEKRAFM-ESLPAEIAAIEEASRPLQNLL-----AIPFTTMDHTRQQDAKELSSPLYVLYCELDAYMKAMDCDTIDLAV 276
BLAST of NO02G02830 vs. NCBI_GenBank
Match: XP_019542282.1 (PREDICTED: THO complex subunit 5 homolog [Aedes albopictus]) HSP 1 Score: 71.6 bits (174), Expect = 8.700e-9 Identity = 67/224 (29.91%), Postives = 106/224 (47.32%), Query Frame = 0 Query: 23 AWLNDDNLALPKGELQELVTEAAVALIEYKGLARESAVAVECCRAEMQAKKREVDERHLQLQNLLYEKDHLQRTIQTLRDFPLKELAKMEREEGVPLLPGLTEGADGEGR--LLSMEEHRQNMETLRAEKETRLRLHQEHADAQTKRAALAEELSKLRDMLGTTLPRQIEELDALCRGIQERMPDIPVAVPFGGFSVD-DLRALPQALFILLGRLHAYAQAFDP 244 A L DN K + E E ++A + K L R V + R + +K VD LQLQNLLYE DHL++ +Q F ++ E E VP+ + + R +EH + + L E + R L + Q +A +AEE+ + L + PR +++L A R +QE + D+P+ G+ + +R L Q L++L + AY +A DP Sbjct: 74 ATLKKDNSEEAKAAIAEKRIEGSLAFVALKKLNRLDKVRIRDGREALHKEKLRVDSNRLQLQNLLYEADHLKKEVQRCYLFKSQD----EEIELVPVDEFYEKAPETISRPEKTKEDEHARRLARLEWELQQRKELDAHCKELQASKAKIAEEIVSKTERLDSLAPR-LKDLLAATRPLQEAL-DMPIE---KGWEIQKTVRLLVQPLYMLYANVTAYGEACDP 288
BLAST of NO02G02830 vs. NCBI_GenBank
Match: XP_001661802.1 (THO complex subunit 5 homolog B [Aedes aegypti] >EAT36266.1 AAEL011637-PA [Aedes aegypti]) HSP 1 Score: 71.2 bits (173), Expect = 1.100e-8 Identity = 70/243 (28.81%), Postives = 113/243 (46.50%), Query Frame = 0 Query: 13 FTGLVHQLK-----AAWLNDDNLALPKGELQELVTEAAVALIEYKGLARESAVAVECCRAEMQAKKREVDERHLQLQNLLYEKDHLQRTIQTLRDFPLKELAKMEREEGVPLLPGLTEGADGEGRLLSM------EEHRQNMETLRAEKETRLRLHQEHADAQTKRAALAEELSKLRDMLGTTLPRQIEELDALCRGIQERMPDIPVAVPFGGFSVD-DLRALPQALFILLGRLHAYAQAFDP 244 F G +LK A L DN K + E E ++A + K L R V + R + +K VD LQLQNLLYE DHL++ +Q F ++E + L+P + E D +S ++H + + L E + R L + Q +A +A+E+ + L + PR +++L A R +QE + D+P+ G+ + +R L Q L++L + AY +A DP Sbjct: 59 FYGTCDELKKLFDEIATLKKDNSDEAKAAIAEKRIEGSLAFVALKKLNRLDKVRIRDGREALHKEKLRVDSNRLQLQNLLYEADHLKKEVQRCYLF-------KSQDEEIELVP-VDEFYDKAPETISRPEKTKDDDHARRLARLEWELQQRKELDAHCKELQASKAKIADEIVSKTERLDSLAPR-LKDLLAATRPLQEAL-DMPIE---KGWEIQKTVRLLVQPLYMLYANVTAYGEACDP 288
BLAST of NO02G02830 vs. NCBI_GenBank
Match: CBN79838.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 71.2 bits (173), Expect = 1.100e-8 Identity = 62/200 (31.00%), Postives = 95/200 (47.50%), Query Frame = 0 Query: 43 EAAVALIEYKGLARESAVAVECCRAEMQAKKREVDERHLQLQNLLYEKDHLQRTIQTLRDFPLKELAKMEREEGVPLLPGLTEGADGEGRLLSMEEHRQNMETLRAEKETRLRLHQEHADAQTKRAALAEELSKLRDMLGTTLPRQIEELDALCRGIQERMPDIPVAVPFGGFSVDDLRA--LPQALFILLGRLHAYAQA 241 +A + E R+ A+E R ++ K+ +D HLQL+NLLYE+D+L R Q RDF + EL KME +E G E D L + EEH N+ L+ +KE R+ Q + A + + + RD L LP +++++ +++ MP P G R+ LP LF L +L AY + Sbjct: 62 KAQLLFTELHSTTRKIHSAIETIRNKVATAKQTMDVNHLQLENLLYERDYLSRETQLCRDFTMTELNKMEEDEE----QGFLEDVD---TLQTAEEHAGNLAILKDQKEQRINAQLALKATQIRVKAASSTVKESRDYL-DRLPENLKDVERALAPLKKNMPWRP-----GSRRGRHERSSELPGPLFTLYCQLEAYCDS 248
BLAST of NO02G02830 vs. NCBI_GenBank
Match: XP_019548244.1 (PREDICTED: THO complex subunit 5 homolog [Aedes albopictus]) HSP 1 Score: 68.6 bits (166), Expect = 7.400e-8 Identity = 66/223 (29.60%), Postives = 105/223 (47.09%), Query Frame = 0 Query: 23 AWLNDDNLALPKGELQELVTEAAVALIEYKGLARESAVAVECCRAEMQAKKREVDERHLQLQNLLYEKDHLQRTIQTLRDFPLKELAKMEREEGVPLLPGLTEGADGEGR--LLSMEEHRQNMETLRAEKETRLRLHQEHADAQTKRAALAEELSKLRDMLGTTLPRQIEELDALCRGIQERMPDIPVAVPFGGFSVD-DLRALPQALFILLGRLHAYAQAFD 243 A L DN K + E E ++A + K L R V + R + +K VD LQLQNLLYE DHL++ +Q F ++ E E VP+ + + R +EH + + L E + R L + Q +A +AEE+ + L + PR +++L A R +QE + D+P+ G+ + +R L Q L++L + AY +A D Sbjct: 74 AALKKDNSEEAKAAIAEKRIEGSLAFVALKKLNRLDKVRIRDGREALHKEKLRVDSNRLQLQNLLYEADHLKKEVQRCYLFKSQD----EEIELVPVDEFYEKAPETISRPEKTKEDEHARRLARLEWELQQRKELDAHCKELQASKAKIAEEIVSKTERLDSLAPR-LKDLLAATRPLQEAL-DMPIE---KGWEIQKTVRLLVQPLYMLYANVTAYGEACD 287 The following BLAST results are available for this feature:
BLAST of NO02G02830 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO02G02830 ID=NO02G02830|Name=NO02G02830|organism=Nannochloropsis oceanica|type=gene|length=1730bpback to top protein sequence of NO02G02830.1 >NO02G02830.1-protein ID=NO02G02830.1-protein|Name=NO02G02830.1|organism=Nannochloropsis oceanica|type=polypeptide|length=571bpback to top Synonyms
Publications
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