NO02G02770, NO02G02770 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO02G02770 vs. NCBI_GenBank
Match: EWM30398.1 (Mitochondrial biogenesis protein AIM24 [Nannochloropsis gaditana]) HSP 1 Score: 244.2 bits (622), Expect = 5.000e-61 Identity = 149/299 (49.83%), Postives = 178/299 (59.53%), Query Frame = 0 Query: 4 PNPPVPPVGLQQRQAVEPDSGQE---PSYSIFGGNDGGNQIIQFYLAPGQAVLSASSSHLLYASGGVVLQRVRRDSDSILYFGDMDELLTNPLNSTSLSYVGLAAPHAGKILPIKVGTRVALLVQNDCYLAYTGAVSHRRLRLQAGVNAEQLLMTRIMAKPFGQLNSIRSTTAFVHAPGSIMETHLGQGDSMYVCTSAIVAVTEGVTVNLPVA-------SGREWLTRQHNTCLVRGPGTVYISSLPVMKQARRLLNAGRPE---IPAIIRALMIVCLFVACTMALHSLNMLALDGQEF 290 P P P V Q Q P QE P+Y NQI+QF+LA GQ +F D DE+ N S L ++GLAAPHAGKILPIKV R+ALL+QN+ YLA TG+VSHRR+ LQAGVN EQL MTR++A P +S R T F+HAPGSI+ET+LG G MYV SAIVAVTEGVTVNL SG EW + + CLV+GPGTVY+SSLPV +Q RRLL+A RPE + ++R ++V LF A LHSLNMLA DGQEF Sbjct: 6 PVPAAPAVDGQPLQPNVPTESQEETPPAYLXXXXXXXXNQILQFHLAAGQ---------------------------KFFFFTDPDEIYQND-GSEPLGFLGLAAPHAGKILPIKVEGRMALLLQNESYLASTGSVSHRRMCLQAGVNTEQLFMTRVVASP----SSARGATVFLHAPGSIVETNLGLGQKMYVSISAIVAVTEGVTVNLSSTGAQARPLSGAEWARKSQSICLVQGPGTVYVSSLPVARQVRRLLSASRPENLPLLPLLRIFLMVLLFAASLAVLHSLNMLAFDGQEF 272
BLAST of NO02G02770 vs. NCBI_GenBank
Match: WP_038049558.1 (TIGR00266 family protein [Thermoanaerobaculum aquaticum] >KDA53675.1 hypothetical protein EG19_05605 [Thermoanaerobaculum aquaticum]) HSP 1 Score: 74.7 bits (182), Expect = 5.200e-10 Identity = 76/268 (28.36%), Postives = 118/268 (44.03%), Query Frame = 0 Query: 7 PVPPVGLQQRQAVEPDSGQEPSYSIFGGNDGGNQIIQFYLAPGQAVLSASSSHLLYASGGVVLQRVRRDS-------DSILYFGD--------MDELLTNPLNSTSLSYVGLAAPHAGKILPIKV-GTRVALLVQNDCYLAYTGAVSHRRLRLQAGVNAEQLLMTRIMAKPFGQLNSIRST-TAFVHAPGSIMETHLGQGDSMYVCTSAIVAVTEGVTVNLPVASG-REWLTRQHNTCL--VRGPGTVYISSLPVMKQARRLLNAGRP 255 PVPP + +A E D Y I G Q ++ L PG++ + A + ++Y VV++ V D+ D +L G L TN T + V AAP+ G ILPI + L+ Q D +LA VS G+ ++ ++T + + + AFVHA G+++E HL G+S++V T +VA V ++ G + L +RGPG V++ SLP + A R+L A P Sbjct: 56 PVPPPAPRTARADEID------YRIVGQE---MQFVEVELDPGESAI-AEAGAMMYKDPAVVMETVFGDASRESGLMDKLLSAGKRLLTGESLFITLFTN--KGTGKARVAFAAPYPGTILPINLPDVGGQLVCQKDSFLAAARGVS-------IGIFFQRKILTGLFGGEGFIMEKLEGDGLAFVHAGGTVVERHLAPGESLHVDTGCVVAFEPTVDFDIQTVGGVKSMLFGGEGVFFANLRGPGRVWLQSLPFSRLAGRMLQATLP 304
BLAST of NO02G02770 vs. NCBI_GenBank
Match: PKL88551.1 (TIGR00266 family protein [Ignavibacteriae bacterium HGW-Ignavibacteriae-2]) HSP 1 Score: 73.9 bits (180), Expect = 8.900e-10 Identity = 64/238 (26.89%), Postives = 104/238 (43.70%), Query Frame = 0 Query: 29 YSIFGGNDGGNQIIQFYLAPGQAVLSASSSHLLYASGGVVLQRVRR----DSDSILYFGDMDELLTNPLNSTSLSYVGLAAPHAGKILPIKVGT-RVALLVQNDCYLAYTGAVSHRRLRLQAGVNAEQLLMTRIMAKPFGQLNSIRST-----TAFVHAPGSIMETHLGQGDSMYVCTSAIVAVTEGVTVNLPVASG-REWLTRQHNTCLVR--GPGTVYISSLPVMKQARRLLNAGR 254 Y IFG + QI++ L G+ + A ++Y +++Q + G+ + T N T +++ AP+ GKI+PI + ++L Q D YL G++ E +I A FG I AF+HA G+++E HLG G+ + V T + A+TE + ++ G L L + GPG VY+ SLP + A R+ +A R Sbjct: 7 YKIFGDD---MQIVEIELDAGEGI-RAEVGGMMYMDNSIIMQTSTGGGIFSGFKRMITGENFFITTFLHNGTGKAHIAFGAPYPGKIIPIDISKYGGSILCQRDAYLCSAN-----------GIDIEIAFTKKIGAGFFGGEGFILQRLLGEGMAFIHAGGTVIEKHLGPGEVLKVDTGCLAALTETIDYDIEFVGGFTNALFGGEGLFLAKLTGPGLVYLQSLPFSRLADRIFSAAR 229
BLAST of NO02G02770 vs. NCBI_GenBank
Match: PTQ48216.1 (hypothetical protein MARPO_0006s0223 [Marchantia polymorpha]) HSP 1 Score: 73.6 bits (179), Expect = 1.200e-9 Identity = 81/298 (27.18%), Postives = 132/298 (44.30%), Query Frame = 0 Query: 3 APNPPVPPVGLQQRQAVEPDSGQEPSYSIFGGNDGGNQIIQFYLAPGQAVLSASSSHLLYASGGVVLQR--VRRDSDSILY---FGDMDELLTNPLNSTSLSYVGLAAPHAGKILPIKVGT-RVALLVQNDCYLAYTGAVSHRRL---RLQAGV-NAEQLLMTRIMAKPFGQLNSIRSTTAFVHAPGSIMETHLGQGDSMYVCTSAIVAVTEGVTVNLPVAS-------GREWLTRQHNTCLVRGPGTVYISSLPVMKQARRLLNA-GRPEI---PAIIRALMIVCLFVACTMALHSL 280 A + P P Q QAV + I GG Q++Q L P Q ++A + + Y S V + ++ ++++ FG +D + T N T Y+GL AP ++LPI + ++ Q D +L VS + R + G+ E +M +++ + AF+ A GSI++ HL +G+ + V +VA+T V + L A G E L H T GPG V++ SLP + A+++ A P + P + I+ FVA M + SL Sbjct: 5 ALSTPFQPYVYQSPQAV------VTPFQILGGE---AQVLQIMLKP-QEKVTARTGSMCYMSDAVQTETNVPAENAGNVIWQWLFGKVDAISTYVNNGTQDGYIGLGAPSLARVLPIDLAVFGEEIICQRDSFLCSINDVSVSPVATRRARPGMFGGEGFMMQKLVGRGL----------AFITAGGSIIQKHLARGEVLVVDAGCLVAMTTSVELELKYAGPLKRAFFGGENLLHAHLT----GPGVVFVQSLPFFRLAQKIARAVTAPHVRDNPRFFLQIAII-FFVAYVMVISSL 277
BLAST of NO02G02770 vs. NCBI_GenBank
Match: WP_002636230.1 (TIGR00266 family protein [Myxococcus hansupus] >AKQ69669.1 DUF124 domain-containing protein [Myxococcus hansupus]) HSP 1 Score: 72.8 bits (177), Expect = 2.000e-9 Identity = 68/237 (28.69%), Postives = 109/237 (45.99%), Query Frame = 0 Query: 40 QIIQFYLAPGQAVLSASSSHLLYASGGVVLQRVRRD--SDSILYFGDM----DELLTNPLNSTSLSY---------VGLAAPHAGKILPIKVGTRVA-LLVQNDCYLAYTGAVS---HRRLRLQAGV-NAEQLLMTRIMAKPFGQLNSIRSTTAFVHAPGSIMETHLGQGDSMYVCTSAIVAVTEGVTVNLPVASGREWLTRQHN---TCLVRGPGTVYISSLPVMKQARRLLNAGR 254 Q ++ L PG+A + A + L+Y G+ ++ + D S +FG + LLT T++ + V AAP+ GKI+P+ +G L+ Q D +LA VS + +L G+ E +M R+ AF+HA G++ E LG G+ + V T IVA V ++ + SG + +RGPG V++ SLP + A R+L+A R Sbjct: 17 QFVEVELDPGEAAV-AEAGTLMYMEDGIEMETIFGDGSQQSSGFFGSLLGAGKRLLTGESLFTTVFFNKSGRGKRKVSFAAPYPGKIIPVNLGELGGELIAQKDSFLAAAKGVSLGIAFQKKLGTGLFGGEGFIMQRLQG----------DGLAFIHAGGTLHERTLGPGELLRVDTGCIVAFQPTVDYDIQLVSGIKTALFGGEGLFFATLRGPGKVWLQSLPFSRLAGRILSASR 242
BLAST of NO02G02770 vs. NCBI_GenBank
Match: WP_015054989.1 (TIGR00266 family protein [Methanolobus psychrophilus] >AFV25297.1 protein of unknown function DUF124 [Methanolobus psychrophilus R15]) HSP 1 Score: 72.8 bits (177), Expect = 2.000e-9 Identity = 76/246 (30.89%), Postives = 115/246 (46.75%), Query Frame = 0 Query: 26 EPSYSIFGGNDGGNQIIQFYLAPGQAVLSASSSHLLY---------ASGGVVLQRVRRDSDSILYFGDMDELLTNPLNSTSLSYVGLAAPHAGKILPI---KVGTRVALLVQNDCYLAYTGAVSHRRLRLQAGVNAEQLLMTRIMAKPFGQLNSI--RST---TAFVHAPGSIMETHLGQGDSMYVCTSAIVAVTEGVTVNLPVASG-REWLTRQHNTCL--VRGPGTVYISSLPVMKQARRLLNA 252 E Y I GND Q+++ L PG++V A + ++Y ++GG +L+ ++R +F + + T YV AP+ GKI+P+ +VG R L Q D +L G+ E L +I A FG I R T AFVHA G+I++ L G+ + V T IVA +E V N+ + G + L L ++GPGTVY+ SLP + A R++ A Sbjct: 4 EIDYQII-GND--MQLVEIELDPGESV-RAEAGAMMYMGPGIKMETSTGGGLLKGLKRTLTGESFF-----ITSYVHEGTGKGYVAFGAPYPGKIIPLDLKEVGGR--FLCQKDSFLC-----------AAKGIEIEVALTKKIGAGLFGGEGFILQRLTGDGLAFVHAGGTIIKKDLQAGEVIRVDTGCIVAFSEKVDYNIQLVGGFKNALFGGEGLVLATLKGPGTVYLQSLPFSRLADRIMAA 227
BLAST of NO02G02770 vs. NCBI_GenBank
Match: WP_014295981.1 (MULTISPECIES: TIGR00266 family protein [Marinitoga] >AEX84909.1 TIGR00266 family protein [Marinitoga piezophila KA3] >APT75416.1 hypothetical protein LN42_02705 [Marinitoga sp. 1137]) HSP 1 Score: 72.4 bits (176), Expect = 2.600e-9 Identity = 74/246 (30.08%), Postives = 108/246 (43.90%), Query Frame = 0 Query: 29 YSIFGGNDGGNQIIQFYLAPGQAVLSASSSHLLYASGGVVLQRVRRDSDSILYFGDMDELL-------TNPLNS-TSLSYVGLAAPHAGKILPI---KVGTRVALLVQNDCYLAYTGAVSHRRLRLQAGVNAEQLLMTRIMAKPFGQLNSIRST-----TAFVHAPGSIMETHLGQGDSMYVCTSAIVAVTEGVTVNLPVAS-------GREWLTRQHNTCLVRGPGTVYISSLPVMKQARRLLNA 252 Y I+G + QI++ L PG+ V A + ++Y G+ +Q FG + +L TN LN+ S S+V AP+ GK++PI K G + Q D YL AG++ E +I A FG I AFVHA G+I+E L G+++ V T IV + V ++ G E + H T GPGTVY+ SLP + A R+ +A Sbjct: 7 YKIYGDD---MQIVEIELDPGEGV-RAEAGAMMYMEPGIEMQTKATGG----IFGGLKRMLVGESFFITNFLNTGHSKSHVAFGAPYPGKVIPIDLTKFGGE--FICQKDSYLCSA-----------AGIDIEITFTKKIGAGLFGGEGFILERLVGDGLAFVHAGGTIIERQLMPGETLRVDTGCIVGFSNTVDYDIQFVGGFVNALFGGEGIFLTHLT----GPGTVYLQSLPFSRLADRIYSA 227
BLAST of NO02G02770 vs. NCBI_GenBank
Match: GBC79096.1 (hypothetical protein HRbin09_00310 [bacterium HR09]) HSP 1 Score: 72.4 bits (176), Expect = 2.600e-9 Identity = 76/268 (28.36%), Postives = 118/268 (44.03%), Query Frame = 0 Query: 7 PVPPVGLQQRQAVEPDSGQEPSYSIFGGNDGGNQIIQFYLAPGQAVLSASSSHLLYASGGVVLQRVRRDS-------DSILYFGD--------MDELLTNPLNSTSLSYVGLAAPHAGKILPIKV-GTRVALLVQNDCYLAYTGAVSHRRLRLQAGVNAEQLLMTRIMAKPFGQLNSIRST-TAFVHAPGSIMETHLGQGDSMYVCTSAIVAVTEGVTVNLPVASG-REWLTRQHNTCL--VRGPGTVYISSLPVMKQARRLLNAGRP 255 PVPP + +A E D Y I G Q ++ L PG++ + A + ++Y VV++ V D+ D +L G L TN T + V AAP+ G ILPI + L+ Q D +LA VS G+ ++ ++T + + + AFVHA G+++E LG G+S++V T +VA V ++ G + L +RGPG V++ SLP + A R+L A P Sbjct: 56 PVPPPAPRTARADEID------YRIVGHE---MQFVEVELDPGESAI-AEAGAMMYKDPPVVMETVFGDASREAGLMDKLLSAGKRLLTGESLFITLFTN--KGTGKARVAFAAPYPGTILPINLPDVGGQLVCQKDSFLAAARGVS-------IGIFFQRKILTGLFGGEGFIMEKLEGDGLAFVHAGGTVVERTLGPGESLHVDTGCVVAFEPTVDFDIQTVGGVKSMLFGGEGVFFANLRGPGRVWLQSLPFSRLAGRMLQATLP 304
BLAST of NO02G02770 vs. NCBI_GenBank
Match: PTQ48215.1 (hypothetical protein MARPO_0006s0223 [Marchantia polymorpha]) HSP 1 Score: 72.0 bits (175), Expect = 3.400e-9 Identity = 75/286 (26.22%), Postives = 128/286 (44.76%), Query Frame = 0 Query: 3 APNPPVPPVGLQQRQAVEPDSGQEPSYSIFGGNDGGNQIIQFYLAPGQAVLSASSSHLLYASGGVVLQR--VRRDSDSILY---FGDMDELLTNPLNSTSLSYVGLAAPHAGKILPIKVGT-RVALLVQNDCYLAYTGAVSHRRL---RLQAGV-NAEQLLMTRIMAKPFGQLNSIRSTTAFVHAPGSIMETHLGQGDSMYVCTSAIVAVTEGVTVNLPVAS-------GREWLTRQHNTCLVRGPGTVYISSLPVMKQARRLLNAGRPEIPAIIRALMIVCLFVA 272 A + P P Q QAV + I GG Q++Q L P Q ++A + + Y S V + ++ ++++ FG +D + T N T Y+GL AP ++LPI + ++ Q D +L VS + R + G+ E +M +++ + AF+ A GSI++ HL +G+ + V +VA+T V + L A G E L H T GPG V++ SLP + A+++ A P + +L+ + F++ Sbjct: 5 ALSTPFQPYVYQSPQAV------VTPFQILGGE---AQVLQIMLKP-QEKVTARTGSMCYMSDAVQTETNVPAENAGNVIWQWLFGKVDAISTYVNNGTQDGYIGLGAPSLARVLPIDLAVFGEEIICQRDSFLCSINDVSVSPVATRRARPGMFGGEGFMMQKLVGRGL----------AFITAGGSIIQKHLARGEVLVVDAGCLVAMTTSVELELKYAGPLKRAFFGGENLLHAHLT----GPGVVFVQSLPFFRLAQKI--ARTVTAPRVKDSLLFIVFFLS 264
BLAST of NO02G02770 vs. NCBI_GenBank
Match: WP_011550546.1 (TIGR00266 family protein [Myxococcus xanthus] >ABF88177.1 conserved hypothetical protein TIGR00266 [Myxococcus xanthus DK 1622] >SDX77516.1 TIGR00266 family protein [Myxococcus xanthus]) HSP 1 Score: 71.2 bits (173), Expect = 5.800e-9 Identity = 67/238 (28.15%), Postives = 107/238 (44.96%), Query Frame = 0 Query: 40 QIIQFYLAPGQAVLSASSSHLLYASGGVVLQRVRRDSDSIL--YFGDM----DELLTNPLNSTSL---------SYVGLAAPHAGKILPIKVGTRVA-LLVQNDCYLAYTGAVS---HRRLRLQAGV-NAEQLLMTRIMAKPFGQLNSIRSTTAFVHAPGSIMETHLGQGDSMYVCTSAIVAVTEGVTVNLPVASGREWLTRQHN---TCLVRGPGTVYISSLPVMKQARRLLNAGRP 255 Q ++ L PG+A + A + L+Y G+ ++ + D +FG + LLT T++ V AAP+ GKI+P+ + L+ Q D +LA VS + +L G+ E +M R+ AF+HA G++ E LG G+ + V T IVA V ++ + SG + +RGPG V++ SLP + A R+L+A RP Sbjct: 17 QFVEVELDPGEAAV-AEAGTLMYMEDGIEMETIFGDGSEKTSGFFGSLLGAGKRLLTGESLFTTVFLNKSGSGKRKVSFAAPYPGKIIPVNLSELGGELIAQKDSFLAAAKGVSLGIAFQKKLGTGLFGGEGFIMQRLQG----------DGLAFIHAGGTLHERTLGPGEMLRVDTGCIVAFQPTVDYDIQMVSGIKTAFFGGEGLFFATLRGPGKVWLQSLPFSRLAGRILSASRP 243 The following BLAST results are available for this feature:
BLAST of NO02G02770 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO02G02770 ID=NO02G02770|Name=NO02G02770|organism=Nannochloropsis oceanica|type=gene|length=1062bpback to top protein sequence of NO02G02770.1 >NO02G02770.1-protein ID=NO02G02770.1-protein|Name=NO02G02770.1|organism=Nannochloropsis oceanica|type=polypeptide|length=290bpback to top Synonyms
Publications
|