NO02G02680, NO02G02680 (gene) Nannochloropsis oceanica
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Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO02G02680 vs. NCBI_GenBank
Match: XP_005853553.1 (proteasome subunit alpha [Nannochloropsis gaditana CCMP526] >EKU22802.1 proteasome subunit alpha [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 270.0 bits (689), Expect = 1.100e-68 Identity = 168/340 (49.41%), Postives = 200/340 (58.82%), Query Frame = 0
Query: 30 PCLLLLSLVHVLLLLPGTIAEDLSPISPLTRFDAKGQLPQSDAAARAVARGGPLVALSLKEAVLLVAPSERRPRSLIENRGLPKMWRLTDGICLSHVGLIQDSRALLLAAQQAAFEHENRFGEHIPIAELVEVVAGKQQEATMQGSRRPYGSSILIAGLLPDLRGPASIPTSSSSSDSHRRKGVLYPRIYRTDPSGTFTLWRACALGRGTETIMALLEDKYAPEMERKEALKLALECCRVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLMTEAGPEEAEEDLMVAGVDVALISREGVRMWESVSPVEKLLDLV 370
P +LLL LV+ L+ GT AE SPISPLTRFDAKGQLPQSDAAARAV+RG PL+ALSL EA+LLVAP QDSR LLLAAQQAA +HENRFGE IP+AE+VEV+A KQQEATMQG RRPYGSSILIAGLL + PA T S+ L+PRIY+TDPSGTFTLW+ACA+GRG ET M +LE+KY P+M+ ++ALKL+L+CCR T A EE + D GVDVAL+S EGV +WES+SP+E++L+LV
Sbjct: 31 PKVLLLVLVN-LIWSSGTFAESFSPISPLTRFDAKGQLPQSDAAARAVSRGAPLIALSLGEAILLVAPR-------------------------------QDSRTLLLAAQQAAADHENRFGEDIPVAEVVEVIAAKQQEATMQGRRRPYGSSILIAGLLEETPDPA---TKSNKQ--------LFPRIYKTDPSGTFTLWKACAVGRGAETAMTVLEEKYEPDMDLRDALKLSLDCCRALLENGGVIGEEVNKGKEDKSEVERSQQGGSEE-------------------------TGAAREE-KGDRARVGVDVALVSNEGVALWESISPMEEILELV 301
BLAST of NO02G02680 vs. NCBI_GenBank
Match: EWM30373.1 (proteasome subunit alpha [Nannochloropsis gaditana]) HSP 1 Score: 136.0 bits (341), Expect = 2.500e-28 Identity = 83/198 (41.92%), Postives = 105/198 (53.03%), Query Frame = 0
Query: 172 MQGSRRPYGSSILIAGLLPDLRGPASIPTSSSSSDSHRRKGVLYPRIYRTDPSGTFTLWRACALGRGTETIMALLEDKYAPEMERKEALKLALECCRVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLMTEAGPEEAEEDLMVAGVDVALISREGVRMWESVSPVEKLLDLV 370
MQG RRPYGSSILIAGLL + PA T S+ L+PRIY+TDPSGTFTLW+ACA+GRG ET M +LE+KY P+M+ ++ALKL+L+CCR T A EE + D GVDVAL+S EGV +WES+SP+E++L+LV
Sbjct: 1 MQGRRRPYGSSILIAGLLEETPDPA---TKSNKQ--------LFPRIYKTDPSGTFTLWKACAVGRGAETAMTVLEEKYEPDMDLRDALKLSLDCCRALLENGGVIGEEVNKGKEDKSEVERSQQGGSEE-------------------------TGAAREE-KGDRARVGVDVALVSNEGVALWESISPMEEILELV 161
BLAST of NO02G02680 vs. NCBI_GenBank
Match: WP_010867731.1 (proteasome endopeptidase complex, archaeal, alpha subunit [Pyrococcus abyssi] >Q9V122.1 RecName: Full=Proteasome subunit alpha; AltName: Full=20S proteasome alpha subunit; AltName: Full=Proteasome core protein PsmA >CAB49529.1 psmA proteasome, subunit alpha (EC 3.4.99.46) [Pyrococcus abyssi GE5] >CCE69999.1 TPA: proteasome subunit alpha [Pyrococcus abyssi GE5]) HSP 1 Score: 110.9 bits (276), Expect = 8.500e-21 Identity = 70/207 (33.82%), Postives = 107/207 (51.69%), Query Frame = 0
Query: 58 LTRFDAKGQLPQSDAAARAVARGGPLVALSLKEAVLLVAPSERRPRSLIENRGLPKMWRLTDGICLSHVGLIQDSRALLLAAQQAAFEHENRFGEHIPIAELVEVVAGKQQEATMQGSRRPYGSSILIAGLLPDLRGPASIPTSSSSSDSHRRKGVLYPRIYRTDPSGTFTLWRACALGRGTETIMALLEDKYAPEMERKEALKLAL 265
+T F G+L Q + A AV RG V + K+ V+L A +R LIE K++++ D I + G+I D+R L+ A+ A H +GE P+A +V+ + +Q T G RP+G+++L+AG+ +D P +Y TDPSG + W+A A+G G T MA+ EDKY +M EA+KLA+
Sbjct: 14 ITVFSPDGRLFQVNYAREAVKRGATAVGVKCKDGVVL-AVEKRITSRLIEPESYEKIFQIDDHIAAASSGIIADARVLVNRARLEAQIHRLTYGEPAPLAVIVKKICDLKQMHTQYGGVRPFGAALLMAGV----------------NDK--------PELYETDPSGAYFAWKAVAIGSGRNTAMAIFEDKYRDDMTLDEAIKLAI 195
BLAST of NO02G02680 vs. NCBI_GenBank
Match: WP_049953195.1 (proteasome subunit alpha [Halostagnicola larsenii] >AHF99956.1 proteasome subunit alpha [Halostagnicola larsenii XH-48]) HSP 1 Score: 110.2 bits (274), Expect = 1.500e-20 Identity = 71/192 (36.98%), Postives = 103/192 (53.65%), Query Frame = 0
Query: 59 TRFDAKGQLPQSDAAARAVARGGPLVALSLKEAVLLVAPSERRPRS-LIENRGLPKMWRLTDGICLSHVGLIQDSRALLLAAQQAAFEHENRFGEHIPIAELVEVVAGKQQEATMQGSRRPYGSSILIAGLLPDLRGPASIPTSSSSSDSHRRKGVLYPRIYRTDPSGTFTLWRACALGRGTETIMALLEDK 250
T F G+L Q + A AV RG P V + K+ V+L A +R RS L+E + K+ R+ D I ++ G D R L+ A+ A H R+GE I + L + +A QE+T G RPYGS++L+AG+ GP + +G PR+Y DP GT + W+A A+G G++ I A+LEDK
Sbjct: 15 TIFSPDGRLYQVEYAREAVERGSPSVGVLTKDGVVLAA--RKRLRSPLLEPDSVEKVHRVDDHIAVATAGHAADGRMLVEFARNAGQRHRLRYGEPIGVEPLAKEIADHVQESTHSGGSRPYGSALLVAGI---DEGPTA-------------RGGTRPRLYEVDPGGTSSGWQAAAIGDGSQDIRAILEDK 188
BLAST of NO02G02680 vs. NCBI_GenBank
Match: WP_010885632.1 (proteasome endopeptidase complex, archaeal, alpha subunit [Pyrococcus horikoshii] >O59219.1 RecName: Full=Proteasome subunit alpha; AltName: Full=20S proteasome alpha subunit; AltName: Full=Proteasome core protein PsmA >BAA30665.1 260aa long hypothetical proteasome, alpha subunit [Pyrococcus horikoshii OT3]) HSP 1 Score: 109.8 bits (273), Expect = 1.900e-20 Identity = 68/207 (32.85%), Postives = 105/207 (50.72%), Query Frame = 0
Query: 58 LTRFDAKGQLPQSDAAARAVARGGPLVALSLKEAVLLVAPSERRPRSLIENRGLPKMWRLTDGICLSHVGLIQDSRALLLAAQQAAFEHENRFGEHIPIAELVEVVAGKQQEATMQGSRRPYGSSILIAGLLPDLRGPASIPTSSSSSDSHRRKGVLYPRIYRTDPSGTFTLWRACALGRGTETIMALLEDKYAPEMERKEALKLAL 265
+T F G+L Q + A AV RG V + E V+L A +R LIE K++++ D I + G+I D+R L+ A+ A H +GE P+A +V+ + +Q T G RP+G+++L+AG+ P +Y TDPSG + W+A A+G G T MA+ E+KY +M +EA+KLA+
Sbjct: 14 ITVFSPDGRLFQVNYAREAVKRGATAVGVKCNEGVVL-AVEKRITSRLIEPESYEKIFQIDDHIAAASSGIIADARVLVNRARLEAQIHRLTYGEPAPLAVIVKKICDLKQMHTQYGGVRPFGAALLMAGVNEK------------------------PELYETDPSGAYFAWKAVAIGSGRNTAMAIFEEKYKDDMSLEEAIKLAI 195
BLAST of NO02G02680 vs. NCBI_GenBank
Match: WP_013747615.1 (proteasome endopeptidase complex, archaeal, alpha subunit [Pyrococcus sp. NA2] >AEC51057.1 proteasome subunit alpha [Pyrococcus sp. NA2]) HSP 1 Score: 108.2 bits (269), Expect = 5.500e-20 Identity = 67/207 (32.37%), Postives = 105/207 (50.72%), Query Frame = 0
Query: 58 LTRFDAKGQLPQSDAAARAVARGGPLVALSLKEAVLLVAPSERRPRSLIENRGLPKMWRLTDGICLSHVGLIQDSRALLLAAQQAAFEHENRFGEHIPIAELVEVVAGKQQEATMQGSRRPYGSSILIAGLLPDLRGPASIPTSSSSSDSHRRKGVLYPRIYRTDPSGTFTLWRACALGRGTETIMALLEDKYAPEMERKEALKLAL 265
+T F G+L Q + A AV RG V + E V+L A +R LIE K++++ D I + G+I D+R L+ A+ A H +GE P+A +V+ + +Q T G RP+G+++L+AG+ P +Y TDPSG + W+A A+G G T MA+ E+KY +M ++A+KLA+
Sbjct: 14 ITVFSPDGRLFQVNYAREAVKRGATAVGVKCNEGVVL-AVEKRITSRLIEPESYEKIFQIDDHIAAASSGIIADARVLVNRARLEAQIHRLTYGEPAPLAVIVKKICDLKQMHTQYGGVRPFGAALLMAGVNEK------------------------PELYETDPSGAYFAWKAVAIGSGRNTAMAIFEEKYRDDMTLEDAIKLAI 195
BLAST of NO02G02680 vs. NCBI_GenBank
Match: WP_014734541.1 (proteasome endopeptidase complex, archaeal, alpha subunit [Pyrococcus sp. ST04] >AFK23019.1 proteasome subunit alpha [Pyrococcus sp. ST04]) HSP 1 Score: 108.2 bits (269), Expect = 5.500e-20 Identity = 68/207 (32.85%), Postives = 107/207 (51.69%), Query Frame = 0
Query: 58 LTRFDAKGQLPQSDAAARAVARGGPLVALSLKEAVLLVAPSERRPRSLIENRGLPKMWRLTDGICLSHVGLIQDSRALLLAAQQAAFEHENRFGEHIPIAELVEVVAGKQQEATMQGSRRPYGSSILIAGLLPDLRGPASIPTSSSSSDSHRRKGVLYPRIYRTDPSGTFTLWRACALGRGTETIMALLEDKYAPEMERKEALKLAL 265
+T F G+L Q + A AV RG V + E V+L A +R LIE K++++ D I + G+I D+R L+ A+ A H +GE P+A +V+ + +Q T G RP+G+++L+AG+ +D P +Y TDPSG F W+A A+G G T MA+ E+KY +M ++++KLA+
Sbjct: 14 ITVFSPDGRLFQVNYAREAVKRGATAVGVKCNEGVVL-AVEKRITSRLIEPESYEKIFQIDDHIAAASSGIIADARVLVNRARLEAQIHRLTYGEPAPLAVIVKKICDLKQMHTQYGGVRPFGAALLMAGV----------------NDK--------PELYETDPSGAFFAWKAVAIGSGRNTAMAIFEEKYREDMTLEDSIKLAI 195
BLAST of NO02G02680 vs. NCBI_GenBank
Match: OIR58878.1 (20S proteasome component alpha 2, PSMA2 [Amphiamblys sp. WSBS2006]) HSP 1 Score: 107.8 bits (268), Expect = 7.200e-20 Identity = 66/212 (31.13%), Postives = 115/212 (54.25%), Query Frame = 0
Query: 58 LTRFDAKGQLPQSDAAARAVARGGPLVALSLKEAVLLVAPSERRPRSLIENRGLPKMWRLTDGICLSHVGLIQDSRALLLAAQQAAFEHENRFGEHIPI-AELVEVVAGKQQEATMQGSRRPYGSSILIAGLLPDLRGPASIPTSSSSSDSHRRKGVLYPRIYRTDPSGTFTLWRACALGRGTETIMALLEDKYAPEMERKEALKLALECCR 269
LT F KG L Q + A AV++GG V + V ++A +++ +I + K++ ++ I +++ GL D+R LL + ++ +H+ +G P +LV+ +A QE T +G RP+G S+LIAG+ D ++ P +Y+ DPSG++T W+ACALG +E I LLE + P+M+ ++A+ LA++ +
Sbjct: 9 LTTFSQKGGLTQIEYAMNAVSKGGLSVGIKTDSGV-VIASEKKKQTPMIVQSSVEKIFAVSPSIGMAYSGLGPDARVLLDSIRKTVQKHKMLYGGQEPSPVDLVQDIAETMQEYTQRGGVRPFGVSVLIAGI-----------------DCETKE----PMLYQADPSGSYTPWKACALGNNSEKITTLLEKRLRPDMDIEDAVHLAIKALK 198
BLAST of NO02G02680 vs. NCBI_GenBank
Match: CRK95514.1 (CLUMA_CG008983, isoform A [Clunio marinus]) HSP 1 Score: 107.8 bits (268), Expect = 7.200e-20 Identity = 65/208 (31.25%), Postives = 107/208 (51.44%), Query Frame = 0
Query: 58 LTRFDAKGQLPQSDAAARAVARGGPLVALSLKEAVLLVAPSERRPRSLI-ENRGLPKMWRLTDGICLSHVGLIQDSRALLLAAQQAAFEHENRFGEHIPIAELVEVVAGKQQEATMQGSRRPYGSSILIAGLLPDLRGPASIPTSSSSSDSHRRKGVLYPRIYRTDPSGTFTLWRACALGRGTETIMALLEDKYAPEMERKEALKLAL 265
LT F G+L Q + A AVA G V + + V +E + +SL+ + + K+ +TDGI + + G+ D R L+ A++ A + +GE IP ++LV+ VAG QE T G RP+G S+LI G+ P +H G P +++ DPSG + W+A A+G+ + LE +Y+ ++E +A+ A+
Sbjct: 10 LTTFSPSGKLVQIEYALNAVAAGASTVGIKASNGI--VFATENKQKSLLYDENSVHKIENITDGIGMVYSGMGPDYRLLVRQARKMAQNYYLTYGESIPTSQLVQRVAGVMQEYTQSGGVRPFGVSLLICGMEP----------------AHNHSGDFIPLLFQCDPSGAYFAWKATAMGKNSVNGKTFLEKRYSEDLELDDAVHTAI 199
BLAST of NO02G02680 vs. NCBI_GenBank
Match: WP_012570984.1 (proteasome endopeptidase complex, archaeal, alpha subunit [Thermococcus onnurineus] >B6YSH9.1 RecName: Full=Proteasome subunit alpha; AltName: Full=20S proteasome alpha subunit; AltName: Full=Proteasome core protein PsmA >ACJ15511.1 Proteasome alpha subunit [Thermococcus onnurineus NA1]) HSP 1 Score: 107.5 bits (267), Expect = 9.400e-20 Identity = 68/207 (32.85%), Postives = 108/207 (52.17%), Query Frame = 0
Query: 58 LTRFDAKGQLPQSDAAARAVARGGPLVALSLKEAVLLVAPSERRPRSLIENRGLPKMWRLTDGICLSHVGLIQDSRALLLAAQQAAFEHENRFGEHIPIAELVEVVAGKQQEATMQGSRRPYGSSILIAGLLPDLRGPASIPTSSSSSDSHRRKGVLYPRIYRTDPSGTFTLWRACALGRGTETIMALLEDKYAPEMERKEALKLAL 265
+T F G+L Q + A AV RG V + KE V+L A +R LIE K++++ D I + G+I D+R L+ A+ A + +GE +P+ LV+ + +Q T G RP+G+++L+AG+ +D P +Y TDPSG + WRA A+G G T MA+ ED Y+ +++ + A+KLA+
Sbjct: 14 ITVFSPDGRLFQVNYAREAVKRGATAVGVKWKEGVVL-AVEKRITSKLIEPSSYEKIFQIDDHIAAAPSGIIADARVLVDRARLEAQVYRLTYGEPVPLTVLVKKICDLKQAHTQYGGVRPFGAALLMAGV----------------NDK--------PELYETDPSGAYFEWRAVAIGSGRNTAMAIFEDHYSDDLDMEGAIKLAI 195 The following BLAST results are available for this feature:
BLAST of NO02G02680 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO02G02680 ID=NO02G02680|Name=NO02G02680|organism=Nannochloropsis oceanica|type=gene|length=3510bpback to top protein sequence of NO02G02680.1 >NO02G02680.1-protein ID=NO02G02680.1-protein|Name=NO02G02680.1|organism=Nannochloropsis oceanica|type=polypeptide|length=375bpback to top Synonyms
Publications
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