NO02G02670, NO02G02670 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO02G02670 vs. NCBI_GenBank
Match: EWM30411.1 (chaperone protein [Nannochloropsis gaditana]) HSP 1 Score: 321.6 bits (823), Expect = 1.900e-84 Identity = 156/213 (73.24%), Postives = 177/213 (83.10%), Query Frame = 0 Query: 1 MDSPTPTKDYYSILGVPRNSSDEAIKARYRQLAMDLHPDRCAAGDVASVERFKAISEAYRVLVDSGQRRILDDYLEGRRFAGARLRGDEGFFDRLAGVRRPKPXXXXXXXXXXXSKAFRFIEIALSPRVLVMGLGVGFMSYIAFGPRDENFDHTEGMLVPAWYNQRTKRWETPAPWDPAYRAAETKHHARVSKYHVFESTPPGPGGENAGGGG 214 MDSP P KDYYS+LGVPR+SSDEAIKARYRQLAMDLHPDRCAAGD +SVERFKA+SEAY+VL DSGQRRILD+YLEGRRFAGARLRGDEGF DRLAG+RRP+P S+AF +EIALSPRVLVMG+G+ FM+YIA GPR++ H+ +LVPAWYNQRTKRWETPAPW+P YRAA ++HHA+VSKYHVFES P P GG G Sbjct: 1 MDSPPPRKDYYSVLGVPRDSSDEAIKARYRQLAMDLHPDRCAAGDSSSVERFKAVSEAYKVLSDSGQRRILDEYLEGRRFAGARLRGDEGFLDRLAGIRRPRPPPGSRKGGFSSSRAFHLVEIALSPRVLVMGIGLAFMTYIALGPREDR-GHSNDLLVPAWYNQRTKRWETPAPWNPDYRAAGSEHHAKVSKYHVFESAP--PASRRMGGAG 210
BLAST of NO02G02670 vs. NCBI_GenBank
Match: WP_068511995.1 (molecular chaperone DnaJ [Caldimicrobium thiodismutans] >BAU22583.1 molecular chaperone DnaJ [Caldimicrobium thiodismutans]) HSP 1 Score: 80.1 bits (196), Expect = 9.600e-12 Identity = 45/86 (52.33%), Postives = 56/86 (65.12%), Query Frame = 0 Query: 8 KDYYSILGVPRNSSDEAIKARYRQLAMDLHPDRCAAGDVASVERFKAISEAYRVLVDSGQRRILDDYLEGRRFAGARLRGDEGFFD 94 KDYY+ILGVPRN++ + IK YR+LAM HPDR GD ++ E+FK ISEAY VL D +R I D EG + G + G GF D Sbjct: 4 KDYYAILGVPRNATQDEIKRAYRRLAMQFHPDR-NQGDKSAEEKFKDISEAYEVLSDPAKRAIYDQ--EG--YVGLKSSGYRGFED 84
BLAST of NO02G02670 vs. NCBI_GenBank
Match: WP_038057826.1 (molecular chaperone DnaJ [Thermodesulfobacterium hydrogeniphilum]) HSP 1 Score: 79.3 bits (194), Expect = 1.600e-11 Identity = 42/86 (48.84%), Postives = 56/86 (65.12%), Query Frame = 0 Query: 8 KDYYSILGVPRNSSDEAIKARYRQLAMDLHPDRCAAGDVASVERFKAISEAYRVLVDSGQRRILDDYLEGRRFAGARLRGDEGFFD 94 KDYY+ILG+PRN++ E IK YR+LA+ HPD+ GD + E+FK ISEAY VL D +R I D+Y ++G + G GF D Sbjct: 4 KDYYAILGIPRNATQEEIKRAYRRLALKYHPDK-NPGDKEAEEKFKEISEAYEVLSDPEKRAIYDNY----GYSGLKSSGYSGFED 84
BLAST of NO02G02670 vs. NCBI_GenBank
Match: GBC84998.1 (Chaperone protein DnaJ [bacterium HR11]) HSP 1 Score: 79.3 bits (194), Expect = 1.600e-11 Identity = 44/84 (52.38%), Postives = 57/84 (67.86%), Query Frame = 0 Query: 8 KDYYSILGVPRNSSDEAIKARYRQLAMDLHPDRCAAGDVASVERFKAISEAYRVLVDSGQRRILDDY-LEGRRFAGARLRGDEG 91 KDYY+ILGVPRN+++E IK YR+LA+ HPDR GD + E+FK I+EAY VL+D +R I D Y +EG R + GD G Sbjct: 2 KDYYAILGVPRNATEEEIKKAYRRLALQYHPDR-NPGDKEAEEKFKEITEAYSVLIDKEKRAIYDRYGVEGLR---QHVGGDPG 81
BLAST of NO02G02670 vs. NCBI_GenBank
Match: WP_013906642.1 (molecular chaperone DnaJ [Thermodesulfatator indicus] >AEH43895.1 chaperone protein DnaJ [Thermodesulfatator indicus DSM 15286]) HSP 1 Score: 77.4 bits (189), Expect = 6.200e-11 Identity = 46/86 (53.49%), Postives = 51/86 (59.30%), Query Frame = 0 Query: 8 KDYYSILGVPRNSSDEAIKARYRQLAMDLHPDRCAAGDVASVERFKAISEAYRVLVDSGQRRILDDYLEGRRFAGARLRGDEGFFD 94 KDYY ILGV RN+S E IK YR+LA HPD GD + ERFK ISEAY VL D +R I D R + G RG EGF D Sbjct: 4 KDYYQILGVSRNASQEEIKKAYRRLARQYHPD-LHPGDKEAEERFKEISEAYEVLSDPEKRAIYD----ARGWRGLHERGYEGFTD 84
BLAST of NO02G02670 vs. NCBI_GenBank
Match: WP_082863513.1 (molecular chaperone DnaJ [Thermodesulfatator autotrophicus] >OAG27889.1 molecular chaperone DnaJ [Thermodesulfatator autotrophicus]) HSP 1 Score: 77.4 bits (189), Expect = 6.200e-11 Identity = 46/86 (53.49%), Postives = 51/86 (59.30%), Query Frame = 0 Query: 8 KDYYSILGVPRNSSDEAIKARYRQLAMDLHPDRCAAGDVASVERFKAISEAYRVLVDSGQRRILDDYLEGRRFAGARLRGDEGFFD 94 KDYY ILGV RN+S E IK YR+LA HPD GD + ERFK ISEAY VL D +R I D R + G RG EGF D Sbjct: 4 KDYYQILGVSRNASQEEIKKAYRRLARQYHPD-LHPGDKEAEERFKEISEAYEVLSDPEKRAIYD----ARGWRGLHERGYEGFTD 84
BLAST of NO02G02670 vs. NCBI_GenBank
Match: OFV92195.1 (molecular chaperone DnaJ [Acidobacteria bacterium RIFCSPLOWO2_02_FULL_64_15] >OFW33140.1 molecular chaperone DnaJ [Acidobacteria bacterium RIFCSPLOWO2_12_FULL_65_11]) HSP 1 Score: 77.4 bits (189), Expect = 6.200e-11 Identity = 42/84 (50.00%), Postives = 55/84 (65.48%), Query Frame = 0 Query: 8 KDYYSILGVPRNSSDEAIKARYRQLAMDLHPDRCAAGDVASVERFKAISEAYRVLVDSGQRRILDDYLEGRRFAGARLRGDEGF 92 +DYY +LGVPR++SD IK+ YR+LAM HPDR AGD A+ E+FK +EAY VL D+ +R + D + G GA G GF Sbjct: 4 RDYYEVLGVPRSASDGDIKSAYRKLAMKYHPDR-NAGDKAAEEKFKEAAEAYAVLSDTEKRGVYDRF--GHSGVGATAGGPAGF 84
BLAST of NO02G02670 vs. NCBI_GenBank
Match: WP_013908856.1 (molecular chaperone DnaJ [Thermodesulfobacterium geofontis] >AEH22156.1 Chaperone protein dnaJ [Thermodesulfobacterium geofontis OPF15]) HSP 1 Score: 77.0 bits (188), Expect = 8.100e-11 Identity = 43/86 (50.00%), Postives = 55/86 (63.95%), Query Frame = 0 Query: 8 KDYYSILGVPRNSSDEAIKARYRQLAMDLHPDRCAAGDVASVERFKAISEAYRVLVDSGQRRILDDYLEGRRFAGARLRGDEGFFD 94 KDYY+ILGVPR+++ E IK YR+LA+ HPDR G+ + E+FK ISEAY VL D +R I D Y ++G R G GF D Sbjct: 4 KDYYAILGVPRDATQEEIKRAYRRLALKYHPDR-NPGNKEAEEKFKEISEAYEVLSDPEKRAIYDAY----GYSGLRSTGYRGFED 84
BLAST of NO02G02670 vs. NCBI_GenBank
Match: KKS16239.1 (Chaperone protein DnaJ [candidate division WWE3 bacterium GW2011_GWB1_41_6] >KKS22578.1 Chaperone protein DnaJ [candidate division WWE3 bacterium GW2011_GWA1_41_8] >OGC58327.1 hypothetical protein A2976_03160 [candidate division WWE3 bacterium RIFCSPLOWO2_01_FULL_41_9]) HSP 1 Score: 77.0 bits (188), Expect = 8.100e-11 Identity = 44/89 (49.44%), Postives = 55/89 (61.80%), Query Frame = 0 Query: 8 KDYYSILGVPRNSSDEAIKARYRQLAMDLHPDRCAAGDVASVE-RFKAISEAYRVLVDSGQRRILDDY-LEGRRFAGAR----LRGDEG 91 KDYY +LGVP+N+ DE IK YR LA + HPD GD E RFK I+EAY+VL D +R++ D Y G FAGA+ RG +G Sbjct: 5 KDYYEVLGVPKNAGDEDIKKAYRNLAREHHPDVVKDGDKTGAEKRFKEINEAYQVLSDPQKRKMYDQYGHAGGGFAGAQGNGPFRGQQG 93
BLAST of NO02G02670 vs. NCBI_GenBank
Match: OIN95093.1 (molecular chaperone DnaJ [Deltaproteobacteria bacterium CG1_02_45_11]) HSP 1 Score: 77.0 bits (188), Expect = 8.100e-11 Identity = 40/79 (50.63%), Postives = 53/79 (67.09%), Query Frame = 0 Query: 8 KDYYSILGVPRNSSDEAIKARYRQLAMDLHPDRCAAGDVASVERFKAISEAYRVLVDSGQRRILDDY----LEGRRFAG 83 +DYY +LGV RN++D+ +KA YR+LA+ HPDR GD + E+FKA +EAY VL D +R I D Y LEG F+G Sbjct: 5 RDYYEVLGVSRNANDDELKAAYRKLALKYHPDR-TPGDKMAEEKFKAAAEAYGVLRDRQKREIYDQYGHQGLEGTGFSG 82 The following BLAST results are available for this feature:
BLAST of NO02G02670 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO02G02670 ID=NO02G02670|Name=NO02G02670|organism=Nannochloropsis oceanica|type=gene|length=1014bpback to top protein sequence of NO02G02670.1 >NO02G02670.1-protein ID=NO02G02670.1-protein|Name=NO02G02670.1|organism=Nannochloropsis oceanica|type=polypeptide|length=224bpback to top Synonyms
Publications
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