NO02G02590, NO02G02590 (gene) Nannochloropsis oceanica

Overview
NameNO02G02590
Unique NameNO02G02590
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2629
Alignment locationchr2:720277..722905 +

Link to JBrowse

Properties
Property NameValue
DescriptionLariat debranching enzyme
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr2genomechr2:720277..722905 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0016787hydrolase activity
GO:0016788hydrolase activity, acting on ester bonds
GO:0016787hydrolase activity
Vocabulary: Biological Process
TermDefinition
GO:0006397mRNA processing
GO:0006139nucleobase-containing compound metabolic process
Vocabulary: INTERPRO
TermDefinition
IPR004843Calcineurin-like_PHP_apaH
IPR007708DBR1_C
Homology
BLAST of NO02G02590 vs. NCBI_GenBank
Match: EWM30400.1 (lariat debranching enzyme [Nannochloropsis gaditana])

HSP 1 Score: 684.5 bits (1765), Expect = 2.900e-193
Identity = 334/415 (80.48%), Postives = 359/415 (86.51%), Query Frame = 0
Query:    3 HPNLRIVVEGCCHGELDQIYASIARMEQEKGQKMDLLICCGDFQAVRNKEDLKAMNVPSKYLTMASFHRYYSGEAIAPVLTLFVGGNHEASNHLQELYYGGWVAPNIYYLGCSGVVSVGGVRIAGISGIYNGRDYRRGHFETPPYSPSTLRSIYHVREYEVFKLAQLAVGTSNDGTGSAAPVDVMLSHDWPRGIYHHGNLPQLLRTKPYFRQECETNTLGSEAGELLLQQLQPSFWFAGHLHCKFAAVVRHPHQLQQQQ-QQRMTKFLALDKCLPNRDFLQLVEVPRPRDNWETPVRLEYDLEWLAILRSTHSLLSRAEREVVLPQESRMVSGADKDWVRQRLTAACQARGQDPAKHALEIPPSSFVRTAAVYSPSHPAAAAGDGTLRGSPQTDALLKLLELSHRVTIPYTHTPP 417
            H NLRIVVEGCCHGELDQIYASIA +EQE GQ +DLLICCGDFQAVRNKEDLK+MNVPSKYLTMASFHRYYSGE +APVLT+F+GGNHEASNHLQELYYGGWVAPNIYYLGCSGVVSVGGVRIAGISGIYNGRDY RGHFE PPYSPSTLRSIYHVREYEVFKLAQLA G+     G +A VDVMLSHDWPRGIYHHG++ QLLRTKPYFR+ECETNTLGS+A ELLL  LQPS+WFAGHLHCKFAAVVRH     Q      +TKFLALDKCLPNRDFLQLVE+PRP D WE PVRLEYDLEWLAILRSTHSLLSRAEREVVLP+ESR V+  D +WVR RL AAC+ RG DP++ ALEI P +FV+TA V+ PS      GDG LRGSPQTDALLKLLEL HRVT+PYT  PP
Sbjct:    2 HKNLRIVVEGCCHGELDQIYASIALIEQESGQNVDLLICCGDFQAVRNKEDLKSMNVPSKYLTMASFHRYYSGEKVAPVLTIFIGGNHEASNHLQELYYGGWVAPNIYYLGCSGVVSVGGVRIAGISGIYNGRDYHRGHFEAPPYSPSTLRSIYHVREYEVFKLAQLASGSG--ARGDSAHVDVMLSHDWPRGIYHHGDMGQLLRTKPYFRKECETNTLGSQAAELLLNLLQPSYWFAGHLHCKFAAVVRHSSSTSQMSTPANVTKFLALDKCLPNRDFLQLVEIPRPPDCWEQPVRLEYDLEWLAILRSTHSLLSRAEREVVLPRESRRVAPDDLEWVRARLAAACKRRGDDPSQ-ALEIQPDAFVKTAPVHEPSSTDGLHGDGCLRGSPQTDALLKLLELGHRVTVPYTPCPP 413          
BLAST of NO02G02590 vs. NCBI_GenBank
Match: CAF95984.1 (unnamed protein product, partial [Tetraodon nigroviridis])

HSP 1 Score: 414.1 bits (1063), Expect = 7.200e-112
Identity = 215/400 (53.75%), Postives = 277/400 (69.25%), Query Frame = 0
Query:    6 LRIVVEGCCHGELDQIYASIARMEQEKGQKMDLLICCGDFQAVRNKEDLKAMNVPSKYLTMASFHRYYSGEAIAPVLTLFVGGNHEASNHLQELYYGGWVAPNIYYLGCSGVVSVGGVRIAGISGIYNGRDYRRGHFETPPYSPSTLRSIYHVREYEVFKLAQLAVGTSNDGTGSAAPVDVMLSHDWPRGIYHHGNLPQLLRTKPYFRQECETNTLGSEAGELLLQQLQPSFWFAGHLHCKFAAVVRHPHQLQQQQQQRMTKFLALDKCLPNRDFLQLVEV-PRPRDNWETPVRLEYDLEWLAILRSTHSLLSRAEREVVLPQESRMVSGADKDWVRQRLTAACQARGQDPAKHALEIPPSSFVRTAAVYSPSHPAAAAGDGTLRGSPQTDALLKLLELS 405
            ++I VEGCCHGELD+IY +IA ME+++G K+DLL+CCGDFQAVRN+ED+K M VP+KY TM +F++YYSGE  AP+LT+F+GGNHEASNHLQEL YGGWVAPNIY+LG +G+V   G+RI G+SGI+  RDYR+GH E PPY+P TLRS+YH+R  EVFKL Q+ +           PVD+ +SHDWPRGIYH+G+  +LLR K + RQE E+NTLGS   E LL  LQPS+WF+ HLH KFAAV++HP   + +   R+TKFL+LDKCLP R+FLQ+V+V  RP  +      LEYD EWLAIL++T+SL    +R   +P      +G  + W      AA     +D  +  L I P +F RTA  Y PS P   A     + +PQT  L  LL L+
Sbjct:    1 MKIAVEGCCHGELDKIYETIAYMEEKEGVKVDLLLCCGDFQAVRNEEDMKCMAVPAKYRTMQTFYKYYSGEKKAPILTIFIGGNHEASNHLQELPYGGWVAPNIYFLGYAGIVRYKGIRIGGLSGIFKARDYRKGHHEFPPYNPDTLRSVYHIRNVEVFKLKQVQM-----------PVDIFMSHDWPRGIYHYGSTKELLRKKKFLRQEVESNTLGSPPAEELLAHLQPSYWFSAHLHVKFAAVMQHPP--KDKASPRVTKFLSLDKCLPYREFLQIVDVGERPGSS----DGLEYDPEWLAILKATNSL----QRTTPVPWNPPENNGLHERWDFSASEAALVEVVKD-LRGELAI-PDNFSRTAPAYDPSRPQPHA-KPRRQANPQTTELCALLGLT 376          
BLAST of NO02G02590 vs. NCBI_GenBank
Match: XP_006010576.1 (PREDICTED: lariat debranching enzyme isoform X1 [Latimeria chalumnae])

HSP 1 Score: 412.9 bits (1060), Expect = 1.600e-111
Identity = 205/377 (54.38%), Postives = 263/377 (69.76%), Query Frame = 0
Query:    6 LRIVVEGCCHGELDQIYASIARMEQEKGQKMDLLICCGDFQAVRNKEDLKAMNVPSKYLTMASFHRYYSGEAIAPVLTLFVGGNHEASNHLQELYYGGWVAPNIYYLGCSGVVSVGGVRIAGISGIYNGRDYRRGHFETPPYSPSTLRSIYHVREYEVFKLAQLAVGTSNDGTGSAAPVDVMLSHDWPRGIYHHGNLPQLLRTKPYFRQECETNTLGSEAGELLLQQLQPSFWFAGHLHCKFAAVVRHPHQLQQQQQQRMTKFLALDKCLPNRDFLQLVEV---PRPRDNWETPVRLEYDLEWLAILRSTHSLLSRAEREVVLPQESRMVSGADKDWVRQRLTAACQARGQDPAKHALEIPPSSFVRTAAVYSPSHP 380
            ++I VEGCCHGELD+IY +I  +E+++  K+DLL+CCGDFQAVRN+ D+K M VPSKY  M +F++YYSGE  APVLT+F+GGNHEASNHLQEL YGGWVAPNIYYLG +GVV   GVRI G+SGI+   DYR+GHFE PPY+  T+RS YHVR  ++FKL QL             P+D+ LSHDWPR IYH+GN  QLL+ K + R E ETNTLGS A   LLQ L+PS+WF+ HLH KFAA+++H  + Q+ Q  + TKFLALDKCLP+RDFLQ+VEV   P   DN      LEYDLEWLA+LR+T+ L++   +   +P+ + + S  D     + +    +  G     H L I P++F  TAA Y P++P
Sbjct:    1 MKIAVEGCCHGELDKIYETIQFLEKKENVKVDLLLCCGDFQAVRNEADMKCMAVPSKYRQMQTFYKYYSGEKKAPVLTIFIGGNHEASNHLQELPYGGWVAPNIYYLGYAGVVKYCGVRIGGVSGIFKSHDYRKGHFEYPPYNQQTIRSAYHVRNIDIFKLKQL-----------KQPMDIFLSHDWPRSIYHYGNKNQLLKKKSFLRHEVETNTLGSPAASELLQHLKPSYWFSAHLHVKFAALMQHQEKDQKGQVPKATKFLALDKCLPHRDFLQIVEVEHDPNASDN------LEYDLEWLAVLRATNDLINVTPKTWNMPENNGLYSKWDYSVAEEAIKEVVEDLG-----HELRI-PTNFSMTAASYDPNNP 354          
BLAST of NO02G02590 vs. NCBI_GenBank
Match: XP_019966641.1 (PREDICTED: lariat debranching enzyme [Paralichthys olivaceus] >XP_019966642.1 PREDICTED: lariat debranching enzyme [Paralichthys olivaceus])

HSP 1 Score: 409.8 bits (1052), Expect = 1.400e-110
Identity = 211/399 (52.88%), Postives = 276/399 (69.17%), Query Frame = 0
Query:    6 LRIVVEGCCHGELDQIYASIARMEQEKGQKMDLLICCGDFQAVRNKEDLKAMNVPSKYLTMASFHRYYSGEAIAPVLTLFVGGNHEASNHLQELYYGGWVAPNIYYLGCSGVVSVGGVRIAGISGIYNGRDYRRGHFETPPYSPSTLRSIYHVREYEVFKLAQLAVGTSNDGTGSAAPVDVMLSHDWPRGIYHHGNLPQLLRTKPYFRQECETNTLGSEAGELLLQQLQPSFWFAGHLHCKFAAVVRHPHQLQQQQQQRMTKFLALDKCLPNRDFLQLVEVPRPRDNWETPVRLEYDLEWLAILRSTHSLLSRAEREVVLPQESRMVSGADKDWVRQRLTAACQARGQDPAKHALEIPPSSFVRTAAVYSPSHPAAAAGDGTLRGSPQTDALLKLLELS 405
            ++I VEGCCHGELD+IY +IA +E+++G K+DLL+CCGDFQAVRN+ D+K M VP+KY TM +F++YYSGE  APVLT+F+GGNHEASNHLQEL YGGWVAPNIYYLG +GV+   G+RI G+SGI+  RDYR+GH E+PPY+P TLRS+YH+R  EVFKL Q+ +           P+D+ +SHDWPRGIY++G++ +LLR K + RQE E+NTLGS A E LL  LQP++WF+ HLH KFAAV+ HP   +     R+TKFL+LDKCLP R+FLQ+V+VP    + E    LEYD EWLAIL++T+S L RA      P E+   +G  + W   R + A   +  +     L I P +F RT   Y P+ P   A   +   +PQT  L   L L+
Sbjct:    1 MKIAVEGCCHGELDKIYETIAYLEKKEGVKVDLLLCCGDFQAVRNEGDMKCMAVPAKYRTMQTFYKYYSGEKKAPVLTIFIGGNHEASNHLQELSYGGWVAPNIYYLGYAGVIRYKGIRIGGLSGIFKSRDYRKGHHESPPYNPDTLRSVYHIRNIEVFKLKQIQM-----------PMDIFMSHDWPRGIYYYGSVGELLRKKKFLRQEVESNTLGSPAAEELLSHLQPNYWFSAHLHVKFAAVMEHPP--KGNAAPRVTKFLSLDKCLPYREFLQIVDVPERPGSSE---GLEYDPEWLAILKATNS-LQRATPHPWNPPEN---NGLHERW-DFRASEAAMMQVMEALSGELAI-PDNFSRTVPAYDPNKPQPHAAP-SYNTNPQTTELCATLGLT 376          
BLAST of NO02G02590 vs. NCBI_GenBank
Match: XP_020925161.1 (lariat debranching enzyme [Sus scrofa])

HSP 1 Score: 407.1 bits (1045), Expect = 8.900e-110
Identity = 202/374 (54.01%), Postives = 261/374 (69.79%), Query Frame = 0
Query:    6 LRIVVEGCCHGELDQIYASIARMEQEKGQKMDLLICCGDFQAVRNKEDLKAMNVPSKYLTMASFHRYYSGEAIAPVLTLFVGGNHEASNHLQELYYGGWVAPNIYYLGCSGVVSVGGVRIAGISGIYNGRDYRRGHFETPPYSPSTLRSIYHVREYEVFKLAQLAVGTSNDGTGSAAPVDVMLSHDWPRGIYHHGNLPQLLRTKPYFRQECETNTLGSEAGELLLQQLQPSFWFAGHLHCKFAAVVRHPHQLQQQQQQRMTKFLALDKCLPNRDFLQLVEVPRPRDNWETPVRLEYDLEWLAILRSTHSLLSRAEREVVLPQESRMVSGADKDWVRQRLTAACQARGQDPAKHALEIPPSSFVRTAAVYSPSHP 380
            +R+ V GCCHGELD+IY ++A  E+     +DLL+CCGDFQAVRN+ DL+ M VP KY  M +F+RYYSGE  APVLT+F+GGNHEASNHLQEL YGGWVAPNIYYLG +GVV   GVRI GISGI+   DYR+GHFE PPY+ ST+RSIYHVR  EV+KL QL             P+D+ LSHDWPR IYH+GN  QLL+TK +FRQE E NTLGS A   LL+ L+P++WF+ HLH KFAA+++H  +  ++Q  + TKFLALDKCLP+RDFLQ++E+   + +   P  LEYD EWLAILR+T+ L++  ER   +P+ + + +  D    ++ +         +   H L++ P +F  TAA Y PS P
Sbjct:    1 MRVAVAGCCHGELDKIYETLALAERRGPGPIDLLLCCGDFQAVRNEADLRCMAVPPKYRHMQTFYRYYSGEKKAPVLTVFIGGNHEASNHLQELPYGGWVAPNIYYLGLAGVVKYRGVRIGGISGIFKSHDYRKGHFECPPYNASTIRSIYHVRNIEVYKLKQL-----------KQPMDIFLSHDWPRSIYHYGNKKQLLKTKSFFRQEVENNTLGSPAASELLEHLKPTYWFSAHLHVKFAALMQHQVK-DKEQSAKATKFLALDKCLPHRDFLQVIEI---QHDPSAPEYLEYDTEWLAILRATNDLINVTERPWNMPENNGLHTRWDYSATKEAMNEV-----MEKLNHDLKV-PCNFSVTAACYDPSKP 353          
BLAST of NO02G02590 vs. NCBI_GenBank
Match: XP_003961739.1 (PREDICTED: lariat debranching enzyme [Takifugu rubripes] >XP_011605617.1 PREDICTED: lariat debranching enzyme [Takifugu rubripes])

HSP 1 Score: 406.8 bits (1044), Expect = 1.200e-109
Identity = 212/399 (53.13%), Postives = 274/399 (68.67%), Query Frame = 0
Query:    6 LRIVVEGCCHGELDQIYASIARMEQEKGQKMDLLICCGDFQAVRNKEDLKAMNVPSKYLTMASFHRYYSGEAIAPVLTLFVGGNHEASNHLQELYYGGWVAPNIYYLGCSGVVSVGGVRIAGISGIYNGRDYRRGHFETPPYSPSTLRSIYHVREYEVFKLAQLAVGTSNDGTGSAAPVDVMLSHDWPRGIYHHGNLPQLLRTKPYFRQECETNTLGSEAGELLLQQLQPSFWFAGHLHCKFAAVVRHPHQLQQQQQQRMTKFLALDKCLPNRDFLQLVEVPRPRDNWETPVRLEYDLEWLAILRSTHSLLSRAEREVVLPQESRMVSGADKDWVRQRLTAACQARGQDPAKHALEIPPSSFVRTAAVYSPSHPAAAAGDGTLRGSPQTDALLKLLELS 405
            ++I VEGCCHGELD+IY +IA ME+++G K+DLL+CCGDFQAVRN+ED+K M VP+KY TM +F++YYSGE  APVLT+F+GGNHEASNHLQEL YGGWVAPNIY+LG +G+V   G+RI G+SGI+  RDYR+GH E PPY+P TLRS+YH+R  EVFKL Q+ +           PVD+ +SHDWPRGIYH+G   +LLR K + RQE ETNTLGS   E LL  LQP++WF+ HLH KFAAV++  H  + +   R+TKFL+LDKCLP R+FLQ+V+VP   +   +   LEYD EWLAIL++T+S L R    +  P E+   +G  + W      AA     ++     L I P +F RT   Y P+ P   A +     +PQT  L  LL L+
Sbjct:    1 MKIAVEGCCHGELDKIYETIAYMEKKEGVKVDLLLCCGDFQAVRNEEDMKCMAVPAKYRTMQTFYKYYSGEKKAPVLTIFIGGNHEASNHLQELPYGGWVAPNIYFLGYAGIVRYKGIRIGGLSGIFKSRDYRKGHHEFPPYNPDTLRSVYHIRNMEVFKLKQVQM-----------PVDIFMSHDWPRGIYHYGTTEELLRKKKFLRQEVETNTLGSPPAEELLAHLQPNYWFSAHLHVKFAAVMQ--HLPKGKASPRVTKFLSLDKCLPYREFLQIVDVP---ERLGSSDGLEYDPEWLAILKATNS-LQRTTPVLWNPPEN---NGLHERWDFSASEAAMMEAVKE-LNGELAI-PDNFTRTVRSYDPNRPQPHA-NPRCHTNPQTTELCALLGLT 376          
BLAST of NO02G02590 vs. NCBI_GenBank
Match: XP_852077.1 (lariat debranching enzyme isoform X1 [Canis lupus familiaris])

HSP 1 Score: 406.4 bits (1043), Expect = 1.500e-109
Identity = 201/374 (53.74%), Postives = 259/374 (69.25%), Query Frame = 0
Query:    6 LRIVVEGCCHGELDQIYASIARMEQEKGQKMDLLICCGDFQAVRNKEDLKAMNVPSKYLTMASFHRYYSGEAIAPVLTLFVGGNHEASNHLQELYYGGWVAPNIYYLGCSGVVSVGGVRIAGISGIYNGRDYRRGHFETPPYSPSTLRSIYHVREYEVFKLAQLAVGTSNDGTGSAAPVDVMLSHDWPRGIYHHGNLPQLLRTKPYFRQECETNTLGSEAGELLLQQLQPSFWFAGHLHCKFAAVVRHPHQLQQQQQQRMTKFLALDKCLPNRDFLQLVEVPRPRDNWETPVRLEYDLEWLAILRSTHSLLSRAEREVVLPQESRMVSGADKDWVRQRLTAACQARGQDPAKHALEIPPSSFVRTAAVYSPSHP 380
            +R+ V GCCHGELD+IY ++A  E+     +DLL+CCGDFQAVRN+ DL+ M VP KY  M +F+RYYSGE  APVLT+F+GGNHEASNHLQEL YGGWVAPNIYYLG +GVV   GVRI GISGI+   DYR+GHFE PPY+P+T+RSIYHVR  EV+KL QL             P+D+ LSHDWPRGIYH+GN  QLL+TK +FRQE E NTLGS A   LL+ L+P++WF+ HLH KFAA+++H     + Q  + TKFLALDKCLP+RDFLQ++E+    +    P  LEYD+EWL +LR+T+ L++  ER   +P+ + + +  D     + +    +        H L++ P +F  TAA Y PS P
Sbjct:    1 MRVAVAGCCHGELDKIYETLALAERRGPGPIDLLLCCGDFQAVRNEADLRCMAVPPKYRHMQTFYRYYSGEKKAPVLTIFIGGNHEASNHLQELPYGGWVAPNIYYLGLAGVVKYRGVRIGGISGIFKSHDYRKGHFECPPYNPATIRSIYHVRNIEVYKLKQL-----------KQPMDIFLSHDWPRGIYHYGNKKQLLKTKSFFRQEVENNTLGSPAASELLEHLKPTYWFSAHLHVKFAALMQH-QAGDKGQTAKATKFLALDKCLPHRDFLQVIEIDHDPN---APEYLEYDIEWLTVLRATNDLINVTERLWNMPENNGLHTRWDYSATEEAMNKVLEI-----LNHDLKV-PCNFSITAACYDPSRP 353          
BLAST of NO02G02590 vs. NCBI_GenBank
Match: XP_019723262.1 (PREDICTED: lariat debranching enzyme [Hippocampus comes] >XP_019723263.1 PREDICTED: lariat debranching enzyme [Hippocampus comes])

HSP 1 Score: 406.4 bits (1043), Expect = 1.500e-109
Identity = 208/403 (51.61%), Postives = 268/403 (66.50%), Query Frame = 0
Query:    6 LRIVVEGCCHGELDQIYASIARMEQEKGQKMDLLICCGDFQAVRNKEDLKAMNVPSKYLTMASFHRYYSGEAIAPVLTLFVGGNHEASNHLQELYYGGWVAPNIYYLGCSGVVSVGGVRIAGISGIYNGRDYRRGHFETPPYSPSTLRSIYHVREYEVFKLAQLAVGTSNDGTGSAAPVDVMLSHDWPRGIYHHGNLPQLLRTKPYFRQECETNTLGSEAGELLLQQLQPSFWFAGHLHCKFAAVVRHPHQLQQQQQQRMTKFLALDKCLPNRDFLQLVEVPRPRDNWETPVRLEYDLEWLAILRSTHSLLSRAEREVVLPQESRMVSGADKDWVRQRLTAACQARGQDPAKHALEIPPSSFVRTAAVYSPSHPAAAAGDGTLRGSPQTDALLKLLELSHRVT 409
            ++I VEGCCHGELD+IY +IA +E+++G K+DLL+CCGDFQAVRN+ DLK M VP+KY TM +F++YYSGE  AP+LT+F+GGNHEASNHLQEL YGGWVAPNIYYLG +GVV   G+RI GISGI+   DYRRGH+E PPY+P TLRS+YHVR  EVFKL Q+ +           PVD+ LSHDWPRGIYHHG   +LLR K + RQE E+N+LGS A   LL+ LQP++WF+ HLH KFAA+ +HP   +     R+TKFL+LDKCLP R+FLQ+V++P    + +    LEYD EWLAIL++T+ L          P+ + +    D       L    +    + A       P++F RT + Y PS P       + R +PQT  L   L L+   T
Sbjct:    1 MKIAVEGCCHGELDKIYETIAYLEKKEGVKVDLLLCCGDFQAVRNEGDLKCMAVPAKYRTMQTFYKYYSGEKKAPILTIFIGGNHEASNHLQELSYGGWVAPNIYYLGYAGVVRYKGIRIGGISGIFKSHDYRRGHYEFPPYNPETLRSVYHVRNIEVFKLKQIRM-----------PVDIFLSHDWPRGIYHHGPTEELLRKKKFLRQEVESNSLGSPAAAELLEHLQPNYWFSAHLHVKFAALKQHPP--KSNAAPRVTKFLSLDKCLPYREFLQIVDIPERAGSSDD---LEYDPEWLAILKATNDLQRTTPHPWNPPENNGLHERWDFTVPEDALLKVVEQLNGELA------IPANFSRTVSPYDPSSPQYHVAP-SYRANPQTTELCATLGLTDLYT 380          
BLAST of NO02G02590 vs. NCBI_GenBank
Match: XP_005908986.1 (PREDICTED: lariat debranching enzyme isoform X1 [Bos mutus] >ELR46705.1 Lariat debranching enzyme [Bos mutus])

HSP 1 Score: 405.6 bits (1041), Expect = 2.600e-109
Identity = 200/374 (53.48%), Postives = 261/374 (69.79%), Query Frame = 0
Query:    6 LRIVVEGCCHGELDQIYASIARMEQEKGQKMDLLICCGDFQAVRNKEDLKAMNVPSKYLTMASFHRYYSGEAIAPVLTLFVGGNHEASNHLQELYYGGWVAPNIYYLGCSGVVSVGGVRIAGISGIYNGRDYRRGHFETPPYSPSTLRSIYHVREYEVFKLAQLAVGTSNDGTGSAAPVDVMLSHDWPRGIYHHGNLPQLLRTKPYFRQECETNTLGSEAGELLLQQLQPSFWFAGHLHCKFAAVVRHPHQLQQQQQQRMTKFLALDKCLPNRDFLQLVEVPRPRDNWETPVRLEYDLEWLAILRSTHSLLSRAEREVVLPQESRMVSGADKDWVRQRLTAACQARGQDPAKHALEIPPSSFVRTAAVYSPSHP 380
            +R+ V GCCHGELD+IY ++A  E+    ++DLL+CCGDFQAVRN+ DL+ M VP KY  M +F+RYYSGE  APVLT+F+GGNHEASNHLQEL YGGWVAPNIYYLG +GVV   GVRI GISGI+   DYR+GHFE PPY+ +T+RSIYHVR  EV+KL QL             P+D+ LSHDWPR IYH+GN  QLL+TK +FRQE E NTLGS A   LL+ L+P++WF+ HLH KFAA+++H   + ++Q  + TKFLALDKCLP+RDFLQ++EV     +   P  LEYD EWL +LR+T  L++  ER   +P+ + + +  D    ++ ++        +   H L++ P++F  TAA Y PS P
Sbjct:    1 MRVAVAGCCHGELDKIYETLALAERRGPGRIDLLLCCGDFQAVRNEADLRCMAVPPKYRHMQTFYRYYSGEKKAPVLTIFIGGNHEASNHLQELPYGGWVAPNIYYLGLAGVVKYRGVRIGGISGIFKSHDYRKGHFECPPYNAATVRSIYHVRNIEVYKLKQL-----------KQPMDIFLSHDWPRSIYHYGNKKQLLKTKSFFRQEVENNTLGSPAASELLEHLKPTYWFSAHLHVKFAALMQH-QTMDKEQSTKATKFLALDKCLPHRDFLQVIEV---EHDPSAPDYLEYDAEWLTVLRATDDLINVTERLWNMPENNGLHTRWDYSATKEAISEVL-----EKLNHDLKV-PNNFSITAACYDPSKP 353          
BLAST of NO02G02590 vs. NCBI_GenBank
Match: XP_020735183.1 (lariat debranching enzyme [Odocoileus virginianus texanus])

HSP 1 Score: 405.6 bits (1041), Expect = 2.600e-109
Identity = 202/374 (54.01%), Postives = 259/374 (69.25%), Query Frame = 0
Query:    6 LRIVVEGCCHGELDQIYASIARMEQEKGQKMDLLICCGDFQAVRNKEDLKAMNVPSKYLTMASFHRYYSGEAIAPVLTLFVGGNHEASNHLQELYYGGWVAPNIYYLGCSGVVSVGGVRIAGISGIYNGRDYRRGHFETPPYSPSTLRSIYHVREYEVFKLAQLAVGTSNDGTGSAAPVDVMLSHDWPRGIYHHGNLPQLLRTKPYFRQECETNTLGSEAGELLLQQLQPSFWFAGHLHCKFAAVVRHPHQLQQQQQQRMTKFLALDKCLPNRDFLQLVEVPRPRDNWETPVRLEYDLEWLAILRSTHSLLSRAEREVVLPQESRMVSGADKDWVRQRLTAACQARGQDPAKHALEIPPSSFVRTAAVYSPSHP 380
            +R+ V GCCHGELD+IY ++A  E+     +DLL+CCGDFQAVRN+ DL+ M VP KY  M +F+RYYSGE  APVLT+F+GGNHEASNHLQEL YGGWVAPNIYYLG +GVV   GVRI GISGI+   DYR+GHFE PPY+ +T+RSIYHVR  EV+KL QL             P+D+ LSHDWPR IYH+GN  QLL+TK +FRQE E NTLGS A   LL+ L+P++WF+ HLH KFAA+++H   + + Q  R TKFLALDKCLP+RDFLQ++EV     +   P  LEYD EWL ILR+T+ L++  ER   +P+ + + +  D    ++ +         +   H L++ P++F  TAA Y PS P
Sbjct:    1 MRVAVAGCCHGELDKIYETLALAERRGPGPIDLLLCCGDFQAVRNEADLRCMAVPPKYRHMQTFYRYYSGEKKAPVLTIFIGGNHEASNHLQELPYGGWVAPNIYYLGLAGVVKYRGVRIGGISGIFKSHDYRKGHFECPPYNAATIRSIYHVRNIEVYKLKQL-----------KQPMDIFLSHDWPRSIYHYGNKKQLLKTKSFFRQEVENNTLGSPAASELLEHLKPTYWFSAHLHVKFAALMQH-QTMDEGQSTRATKFLALDKCLPHRDFLQVIEV---EHDPSAPDYLEYDAEWLTILRATNDLINVTERLWNMPENNGLHTRWDYSATKEAINEVL-----EKLNHDLKV-PNNFSITAACYDPSKP 353          
The following BLAST results are available for this feature:
BLAST of NO02G02590 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM30400.12.900e-19380.48lariat debranching enzyme [Nannochloropsis gaditan... [more]
CAF95984.17.200e-11253.75unnamed protein product, partial [Tetraodon nigrov... [more]
XP_006010576.11.600e-11154.38PREDICTED: lariat debranching enzyme isoform X1 [L... [more]
XP_019966641.11.400e-11052.88PREDICTED: lariat debranching enzyme [Paralichthys... [more]
XP_020925161.18.900e-11054.01lariat debranching enzyme [Sus scrofa][more]
XP_003961739.11.200e-10953.13PREDICTED: lariat debranching enzyme [Takifugu rub... [more]
XP_852077.11.500e-10953.74lariat debranching enzyme isoform X1 [Canis lupus ... [more]
XP_019723262.11.500e-10951.61PREDICTED: lariat debranching enzyme [Hippocampus ... [more]
XP_005908986.12.600e-10953.48PREDICTED: lariat debranching enzyme isoform X1 [B... [more]
XP_020735183.12.600e-10954.01lariat debranching enzyme [Odocoileus virginianus ... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL016nonsL016Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR032ncniR032Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR002ngnoR002Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR000ngnoR000Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK006905NSK006905Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO02G02590.1NO02G02590.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|550083gene_849Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100026g44gene261Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO02G02590.1NO02G02590.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO02G02590 ID=NO02G02590|Name=NO02G02590|organism=Nannochloropsis oceanica|type=gene|length=2629bp
TCGTCGACGATCTGAGTACTCTTTATTTGTTTATTTATTTATTATTTTCC
AAATTCTCATTTTCTTCCAGCAACGGTTGCAGCGGAGAAGATCTGCTTAT
GAGAACGAATAATCACTCGTCCGTGGTCGGTGTTAGATTTAGTTGGGCCT
GTGGCATGGAGCCGTTGCCGCGTTGACGCTTGCTCCACCCGCAGGCCCAT
TTGTGATGGGAAACCCGTTCACTACTAGTCACCGAAAGCCGAGCATCTTC
TTGTAAATGCTGGTATAGTGAGAATCATATCTAAGAGCGGCTTCTGTTGG
TAGTGGAGGGGGAAATTTGAGCGCCCAGCCATCCACTGACGTCACACAGC
ACTCCAGTACAGGAGGAGCAGCGGCAGCATCTGGACCATTGCGCGAATAA
CCCCCGATGCCGTTGTTGCTGCCCGCCGCACGCCCTGTAGCAACCCGACA
CTCGACTGCTCTCTCACCTTCCCGTTCTCACACTTATCTTCCCACTCCAC
CAAGTAAGACAGTCAGCACCAGGCCGTATTTTAACTTTAGGAGTACCAAG
CCCCTCTGCTCCTTCGCCAACCTCCCCTTTCCTCATTATCAGACGCCAAA
CCCTAGTGTCAAACCAAAGCCCAAGCAAAATGCAGCACCCAAACCTGCGC
ATCGTCGTGGAAGGATGCTGTCATGGGGAGCTTGACCAGATCTACGCCTC
CATCGCCCGAATGGAACAAGAAAAAGGGCAGAAAATGGACCTTCTCATTT
GCTGCGGTGACTTCCAAGCGGTGCGCAATAAGGAAGACCTGAAGGCCATG
AACGTCCCGAGTAAGTACCTGACCATGGCCTCCTTCCATCGGTATTACAG
CGGAGAAGCCATCGCCCCGGTTTTGACCCTGTTCGTTGGCGGCAACCACG
AGGCATCCAACCACTTGCAAGAGCTGTACTATGGCGGGTGGGTCGCCCCC
AACATCTACTACCTTGGATGCTCTGGCGTGGTTTCTGTAGGCGGCGTACG
CATCGCGGGCATCTCCGGCATTTATAATGGACGAGACTACCGTCGTGGGC
ACTTCGAGACTCCGCCTTACTCTCCCAGCACTCTCCGTTCCATCTACCAC
GTCCGAGAATATGAAGTGTTCAAGCTTGCGCAACTCGCCGTGGGGACAAG
CAATGACGGCACCGGGAGCGCCGCACCGGTCGACGTAATGCTTTCGCATG
ACTGGCCTCGTGGCATATATCACCATGGAAATTTACCACAGCTGCTGCGG
ACTAAGCCTTACTTCCGACAGGAATGTGAGACGAACACTTTGGGAAGTGA
GGCTGGCGAGCTATTGCTCCAGCAACTTCAACCCTCTTTTTGGTTCGCGG
GGCATCTACACTGTAAATTTGCTGCTGTTGTGCGTCATCCCCACCAGCTA
CAGCAGCAGCAGCAGCAGCGCATGACGAAGTTTTTGGCGCTGGATAAGTG
TCTGCCGAACCGGGATTTTTTGCAGCTGGTGGAGGTGCCTCGCCCGAGGG
ACAATTGGGAGACACCGGTGCGATTAGAGTATGATTTGGAATGGCTGGCG
ATATTGAGATCTACACATTCATTGTTAAGTAGAGCAGAGAGGGAGGTTGT
GTTGCCGCAGGAGAGTAGGATGGTGTCGGGGGCAGATAAAGATTGgtgag
ttggaggaaggagggagggagggagggagggagggagggagggagggagg
gagagatgaagtatgaagcgggaagaaatgtaaacgaggctcgttccaca
agccctttctctttcgacattcgattttaaatgaataaaaacatttgtaa
tcgacctcttttcgacgtctttcactttcctcagGGTTCGGCAACGCCTC
ACCGCCGCCTGCCAAGCCCGCGGACAAGACCCGGCCAAGCATGCCCTGGA
AATCCCCCCTTCGTCCTTCGTTCGCACGGCGGCCGTCTACAGCCCCTCCC
ATCCTGCTGCTGCTGCTGGAGATGGCACCTTGCGAGGAAGCCCTCAAACA
GATGCCCTGCTCAAGCTTTTGGAGTTGAGCCATCGAGTCACGATTCCGTA
CACACACACGCCTCCTCTGCCGCACCTTTCGATGCGTGGGCAGCAGCAGC
AGCAGCAGGAGTCGCAGCAGCAGCAGCAGCAGCAGGAGGAGTCGCAGCAG
CAGGAAGAAGAGCAGAAGCAGCCGAGAGGCGGGGATAGTCTCTTTTTCCT
TGATCGCGGGGAGAAGGGTCGTGACCCGAATTCGATTGAGCTGGATGACG
AGGATGGGGGGGATGCTGCGGGGGAGGAGGAAGAAGAGGAGTGCGATGAT
GAGGTCGCGATGAGATATAAGGCGCAGCAGCAGCAGCAGCCGCAAGGCAA
GTCGGAGAATAAAGAGGAGGAGGACGTGATTGTGTTCAGAAGCGGGAGAA
GCCCACCCGTAGCAGCTACTGTTCCTGCTACTGCTGCTACTACTGCTACT
GCTGCTGCTGCAGCAGCACCACAAGCGGGAACGGCCTCTTCGCCGGCGCT
TCCCTTCCGACGTAAGCTCGTGCTGCCACCACCGTCAGCATCGTCATCGT
GAGGAAAAGTTCCAAAAAACAAGTAGAGAAAAAAGGATGAAAAAAATGAT
TGAAAGAATGTCCATCCATCCATACAAAG
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protein sequence of NO02G02590.1

>NO02G02590.1-protein ID=NO02G02590.1-protein|Name=NO02G02590.1|organism=Nannochloropsis oceanica|type=polypeptide|length=578bp
MQHPNLRIVVEGCCHGELDQIYASIARMEQEKGQKMDLLICCGDFQAVRN
KEDLKAMNVPSKYLTMASFHRYYSGEAIAPVLTLFVGGNHEASNHLQELY
YGGWVAPNIYYLGCSGVVSVGGVRIAGISGIYNGRDYRRGHFETPPYSPS
TLRSIYHVREYEVFKLAQLAVGTSNDGTGSAAPVDVMLSHDWPRGIYHHG
NLPQLLRTKPYFRQECETNTLGSEAGELLLQQLQPSFWFAGHLHCKFAAV
VRHPHQLQQQQQQRMTKFLALDKCLPNRDFLQLVEVPRPRDNWETPVRLE
YDLEWLAILRSTHSLLSRAEREVVLPQESRMVSGADKDWVRQRLTAACQA
RGQDPAKHALEIPPSSFVRTAAVYSPSHPAAAAGDGTLRGSPQTDALLKL
LELSHRVTIPYTHTPPLPHLSMRGQQQQQQESQQQQQQQEESQQQEEEQK
QPRGGDSLFFLDRGEKGRDPNSIELDDEDGGDAAGEEEEEECDDEVAMRY
KAQQQQQPQGKSENKEEEDVIVFRSGRSPPVAATVPATAATTATAAAAAA
PQAGTASSPALPFRRKLVLPPPSASSS*
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Synonyms
Publications