NO02G02460, NO02G02460 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO02G02460 vs. NCBI_GenBank
Match: OUC09794.1 (pyrroline-5-carboxylate reductase, partial [Litorilinea aerophila]) HSP 1 Score: 164.1 bits (414), Expect = 5.800e-37 Identity = 84/188 (44.68%), Postives = 125/188 (66.49%), Query Frame = 0 Query: 69 RIGLVGGGKMSEAIIEGFLKEQLIKPERISVFDVNRARLEFLKKEFGVGTSSSVAATCKNADLVIIAVKPQNLSDKLWAQLKEHLSPQSVLLSIVAGMTMSNFSENTGNTRIVRTMPNTPATIQQGMTVWACSDDVSLSQRNSVAKFLSSLGEQHFVQNELYLDMATAVSGSGPGYVMLILEALVDAG 257 +I +G G M EA+I G L L+ PE+I D AR + +++ + V S AA K+AD+V++++KPQ ++ K++A LK H+ P +++LSI+AG+ + E G+ IVR MPNTPA + GM+VW ++ V+ +QR L +LGEQ V++E YLDMAT +SGSGPGYV L++EAL+DAG Sbjct: 6 KIVFIGSGAMGEAMIRGLLSHDLVTPEQIVACDPVAARRQQMQEAYSVHVSEDNAAAVKDADVVVLSIKPQ-VAAKVFAGLKGHIPPSALVLSIIAGLPIRVMQEGLGHGAIVRCMPNTPAQVGMGMSVWTATEAVTQAQRAQAEAILGALGEQIAVEDEGYLDMATGLSGSGPGYVFLLIEALIDAG 192
BLAST of NO02G02460 vs. NCBI_GenBank
Match: PCI20771.1 (pyrroline-5-carboxylate reductase [SAR202 cluster bacterium]) HSP 1 Score: 164.1 bits (414), Expect = 5.800e-37 Identity = 81/188 (43.09%), Postives = 121/188 (64.36%), Query Frame = 0 Query: 69 RIGLVGGGKMSEAIIEGFLKEQLIKPERISVFDVNRARLEFLKKEFGVGTSSSVAATCKNADLVIIAVKPQNLSDKLWAQLKEHLSPQSVLLSIVAGMTMSNFSENTGNTRIVRTMPNTPATIQQGMTVWACSDDVSLSQRNSVAKFLSSLGEQHFVQNELYLDMATAVSGSGPGYVMLILEALVDAG 257 ++ +GGG M+EAI+ G L Q+ P +++ + R +FL EFGV + ADL+I+A+KPQ+L ++ +L E L P+ +LSI+AG MS S+ + I+R MPNTPA I QGM++W CS VS QR+ +S++G++ +V +E Y+DMATA+S SGP YV +I+EAL+DAG Sbjct: 4 KLAFIGGGTMAEAILRGVLDAQVAAPTDVAIGEPRPERRQFLSSEFGVQAHQGNLDAAREADLLILAIKPQDL-PVIFQELGERLRPEQAVLSIIAGAKMSTLSKGFSHESIIRVMPNTPAQIGQGMSMWTCSXQVSXQQRDFTRSIVSTVGKEIYVDDEKYMDMATALSASGPAYVFMIIEALIDAG 190
BLAST of NO02G02460 vs. NCBI_GenBank
Match: OQY33220.1 (pyrroline-5-carboxylate reductase [Anaerolineaceae bacterium 4572_5.2]) HSP 1 Score: 163.3 bits (412), Expect = 9.900e-37 Identity = 85/189 (44.97%), Postives = 129/189 (68.25%), Query Frame = 0 Query: 69 RIGLVGGGKMSEAIIEGFLKEQLIKPERISVFDVNRARLEFLKKEFGV-GTSSSVAATCKNADLVIIAVKPQNLSDKLWAQLKEHLSPQSVLLSIVAGMTMSNFSENTGNTRIVRTMPNTPATIQQGMTVWACSDDVSLSQRNSVAKFLSSLGEQHFVQNELYLDMATAVSGSGPGYVMLILEALVDAG 257 +I +G G M++A+I G + + LI P++I D+ R E L+ +GV TS++V AT K A++++++VKPQ + D++ A +K + SP++++LSI AG+T+S + + IVR MPNTPA + +GM+VW +D VS QR L SLGE+ FV +E YLDMATA+SG+GP Y+ L +EAL+DAG Sbjct: 6 KIAFIGSGVMAQAMIAGLVNQNLIDPQQIIASDLRPERGEELRARYGVRHTSNNVEATQK-ANIIVLSVKPQAM-DEVLADIKGNFSPEALVLSIAAGVTLSRMKKGLEHDNIVRVMPNTPARVGEGMSVWIAADSVSQRQREQAQTILGSLGEEIFVDHEYYLDMATALSGTGPAYIFLFIEALIDAG 192
BLAST of NO02G02460 vs. NCBI_GenBank
Match: PKB75243.1 (pyrroline-5-carboxylate reductase [SAR202 cluster bacterium MP-SAtl-SRR3965592-G2]) HSP 1 Score: 163.3 bits (412), Expect = 9.900e-37 Identity = 81/188 (43.09%), Postives = 121/188 (64.36%), Query Frame = 0 Query: 69 RIGLVGGGKMSEAIIEGFLKEQLIKPERISVFDVNRARLEFLKKEFGVGTSSSVAATCKNADLVIIAVKPQNLSDKLWAQLKEHLSPQSVLLSIVAGMTMSNFSENTGNTRIVRTMPNTPATIQQGMTVWACSDDVSLSQRNSVAKFLSSLGEQHFVQNELYLDMATAVSGSGPGYVMLILEALVDAG 257 ++ +GGG M+EAI+ G L Q+ P +++ + R +FL EFGV + ADL+I+A+KPQ+L ++ +L E L P+ +LSI+AG MS S+ + I+R MPNTPA I QGM++W CS VS QR+ +S++G++ +V +E Y+DMATA+S SGP YV +I+EAL+DAG Sbjct: 4 KLAFIGGGTMAEAILRGVLDAQVAAPTDVAIGEPRPERRQFLSSEFGVQAHQGNLDAAREADLLILAIKPQDL-PVIFQELGERLRPEQAVLSIIAGAKMSTLSKGFSHESIIRVMPNTPAQIGQGMSMWTCSPQVSEQQRDFTRSIVSTVGKEIYVDDEKYMDMATALSASGPAYVFMIIEALIDAG 190
BLAST of NO02G02460 vs. NCBI_GenBank
Match: PIU24006.1 (pyrroline-5-carboxylate reductase [Chloroflexi bacterium CG08_land_8_20_14_0_20_45_12]) HSP 1 Score: 162.9 bits (411), Expect = 1.300e-36 Identity = 84/188 (44.68%), Postives = 123/188 (65.43%), Query Frame = 0 Query: 69 RIGLVGGGKMSEAIIEGFLKEQLIKPERISVFDVNRARLEFLKKEFGVGTSSSVAATCKNADLVIIAVKPQNLSDKLWAQLKEHLSPQSVLLSIVAGMTMSNFSENTGNTRIVRTMPNTPATIQQGMTVWACSDDVSLSQRNSVAKFLSSLGEQHFVQNELYLDMATAVSGSGPGYVMLILEALVDAG 257 +I +GGG M EA+++ L ++ +P+ I V DV+ R E+L KE+ V T + A + ADL+++AVKPQ+LS + + ++LSP+ V+LSIVAG ++S+ + + ++R MPN PA I Q MTVW + V Q+ + LSSLGE+ +V E YLDMATA+SGSGP YV L +EA +DAG Sbjct: 2 KIAFIGGGTMGEAMVKCILTRKVAEPQDIVVSDVSAWRREWLNKEYRVSTLADNAKVIEGADLIVLAVKPQDLSQAM--EEIKNLSPKQVVLSIVAGASLSSLCQGLNHRSVIRAMPNMPAQIGQSMTVWTATGGVGQEQKQMAQRLLSSLGEEIYVAEERYLDMATALSGSGPAYVFLFIEAFIDAG 187
BLAST of NO02G02460 vs. NCBI_GenBank
Match: PKB58713.1 (pyrroline-5-carboxylate reductase [SAR202 cluster bacterium Casp-Chloro-G2]) HSP 1 Score: 162.9 bits (411), Expect = 1.300e-36 Identity = 85/188 (45.21%), Postives = 118/188 (62.77%), Query Frame = 0 Query: 69 RIGLVGGGKMSEAIIEGFLKEQLIKPERISVFDVNRARLEFLKKEFGVGTSSSVAATCKNADLVIIAVKPQNLSDKLWAQLKEHLSPQSVLLSIVAGMTMSNFSENTGNTRIVRTMPNTPATIQQGMTVWACSDDVSLSQRNSVAKFLSSLGEQHFVQNELYLDMATAVSGSGPGYVMLILEALVDAG 257 +I +GGGKM+EAI+ G L +L +P+ ISV + R E+L +FGV + + + ADLV+ AVKPQ+L + Q++ HLS LSIVAG M S+ + +VR MPNTPA I GMT+W CSD V + R L ++G++ +V +E Y+DMATA+S SGP YV L +EAL+DAG Sbjct: 2 KIAFIGGGKMAEAILHGVLSGKLAEPKDISVGEPVAERREYLSSQFGVIADADNLKSAQQADLVLFAVKPQDLG-SVMGQMRGHLSAGQAALSIVAGAKMETLSKGLRHNSVVRVMPNTPAQIGAGMTLWTCSDGVDEANREMTKAVLGTIGKEIYVSDEKYMDMATALSASGPAYVFLFIEALIDAG 188
BLAST of NO02G02460 vs. NCBI_GenBank
Match: KPJ53382.1 (pyrroline-5-carboxylate reductase [Dehalococcoidia bacterium DG_18]) HSP 1 Score: 161.4 bits (407), Expect = 3.800e-36 Identity = 84/187 (44.92%), Postives = 120/187 (64.17%), Query Frame = 0 Query: 69 RIGLVGGGKMSEAIIEGFLKEQLIKPERISVFDVNRARLEFLKKEFGVGTSSSVAATCKNADLVIIAVKPQNLSDKLWAQLKEHLSPQSVLLSIVAGMTMSNFSENTGNTRIVRTMPNTPATIQQGMTVWACSDDVSLSQRNSVAKFLSSLGEQHFVQNELYLDMATAVSGSGPGYVMLILEALVDA 256 +I +GGG M EA+I G L + L P+ I+V DV+ RL LKKE+ V + K +++V+IAVKPQNL++ L +L+ + ++LSIVAG M+ + G+ +VR MPNTPA I QGM+VW S + S Q+ L +LG + +V +E Y+DMATAVSGSGP Y+ L++EALV+A Sbjct: 2 KIAFIGGGVMGEAMIRGILNKGLTTPQDITVNDVSATRLISLKKEYRVRVTDDYGIAVKGSNIVVIAVKPQNLAE-LMPELEGRFTRGQLVLSIVAGAAMATIARGLGHRSVVRAMPNTPAQIGQGMSVWTASSETSQRQKGMARSILGALGGEIYVPDEKYIDMATAVSGSGPAYIFLVIEALVEA 187
BLAST of NO02G02460 vs. NCBI_GenBank
Match: PKB78413.1 (pyrroline-5-carboxylate reductase [SAR202 cluster bacterium Io17-Chloro-G9]) HSP 1 Score: 161.4 bits (407), Expect = 3.800e-36 Identity = 87/188 (46.28%), Postives = 118/188 (62.77%), Query Frame = 0 Query: 69 RIGLVGGGKMSEAIIEGFLKEQLIKPERISVFDVNRARLEFLKKEFGVGTSSSVAATCKNADLVIIAVKPQNLSDKLWAQLKEHLSPQSVLLSIVAGMTMSNFSENTGNTRIVRTMPNTPATIQQGMTVWACSDDVSLSQRNSVAKFLSSLGEQHFVQNELYLDMATAVSGSGPGYVMLILEALVDAG 257 R+ +GGG M+EAI G L L KP+ ISV + R FL +E+GV ADLV+ AVKPQ+L + QL + L+ + LSIVAG MS ++ G+ I+R MPNTPA I GM++WACS+ VS +QR+ L ++G + +V +E YLDMATA+S SGPGY+ L +EAL+DAG Sbjct: 2 RLAFIGGGTMAEAIFRGVLAAGLAKPDDISVGEPVPERCRFLSEEYGVRVHEDNLQVVPQADLVVFAVKPQDLPVAM-GQLHKRLTGEQSALSIVAGAKMSTLTKGLGHDSIIRVMPNTPAQIGCGMSLWACSEQVSQTQRDLTQAMLGTVGVEVYVADEKYLDMATALSASGPGYIFLFIEALIDAG 188
BLAST of NO02G02460 vs. NCBI_GenBank
Match: PIX27006.1 (pyrroline-5-carboxylate reductase [Chloroflexi bacterium CG_4_8_14_3_um_filter_45_15]) HSP 1 Score: 161.0 bits (406), Expect = 4.900e-36 Identity = 83/188 (44.15%), Postives = 122/188 (64.89%), Query Frame = 0 Query: 69 RIGLVGGGKMSEAIIEGFLKEQLIKPERISVFDVNRARLEFLKKEFGVGTSSSVAATCKNADLVIIAVKPQNLSDKLWAQLKEHLSPQSVLLSIVAGMTMSNFSENTGNTRIVRTMPNTPATIQQGMTVWACSDDVSLSQRNSVAKFLSSLGEQHFVQNELYLDMATAVSGSGPGYVMLILEALVDAG 257 +I +GGG M EA+++ L ++ +P+ I V DV+ R E+L KE+ V T + A + ADL+++AVKPQ+LS + + ++LSP+ V+LSIVAG ++S+ + + ++R MPN PA I Q MTVW + V Q+ + SSLGE+ +V E YLDMATA+SGSGP YV L +EA +DAG Sbjct: 2 KIAFIGGGTMGEAMVKCILTRKVAEPQDIVVSDVSAWRREWLNKEYRVSTLADNAKVIEGADLIVLAVKPQDLSQAM--EEIKNLSPKQVVLSIVAGASLSSLCQGLNHRSVIRAMPNMPAQIGQSMTVWTATAGVGQEQKQMAQRLFSSLGEEIYVAEERYLDMATALSGSGPAYVFLFIEAFIDAG 187
BLAST of NO02G02460 vs. NCBI_GenBank
Match: PKB78557.1 (pyrroline-5-carboxylate reductase [SAR202 cluster bacterium Io17-Chloro-G9]) HSP 1 Score: 160.2 bits (404), Expect = 8.400e-36 Identity = 84/188 (44.68%), Postives = 119/188 (63.30%), Query Frame = 0 Query: 69 RIGLVGGGKMSEAIIEGFLKEQLIKPERISVFDVNRARLEFLKKEFGVGTSSSVAATCKNADLVIIAVKPQNLSDKLWAQLKEHLSPQSVLLSIVAGMTMSNFSENTGNTRIVRTMPNTPATIQQGMTVWACSDDVSLSQRNSVAKFLSSLGEQHFVQNELYLDMATAVSGSGPGYVMLILEALVDAG 257 ++ +GGG M+EAI++G L L P I+V + R EFL KE+GV A ADLV++AVKPQ+L+ +++QL ++SP LSIVAG +S S ++ ++R MPNTPA I GM++W CS DV + L+++GE+ +V +E YLDMATA+S SGP YV L +EAL+DAG Sbjct: 2 KLAFIGGGTMAEAILKGVLDAGLASPGDINVGEPRADRREFLAKEYGVKNHPGNAEAAAGADLVVLAVKPQDLT-HVFSQLGPNMSPGQAALSIVAGAKISTLSSGLDHSAVIRVMPNTPAQIGCGMSLWTCSQDVDDDLKELTRSILATIGEEIYVDDEKYLDMATALSASGPAYVFLFIEALIDAG 188 The following BLAST results are available for this feature:
BLAST of NO02G02460 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO02G02460 ID=NO02G02460|Name=NO02G02460|organism=Nannochloropsis oceanica|type=gene|length=1993bpback to top protein sequence of NO02G02460.1 >NO02G02460.1-protein ID=NO02G02460.1-protein|Name=NO02G02460.1|organism=Nannochloropsis oceanica|type=polypeptide|length=357bpback to top protein sequence of NO02G02460.2 >NO02G02460.2-protein ID=NO02G02460.2-protein|Name=NO02G02460.2|organism=Nannochloropsis oceanica|type=polypeptide|length=258bpback to top Synonyms
Publications
|