NO02G02390, NO02G02390 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO02G02390 vs. NCBI_GenBank
Match: EWM30421.1 (tim21-like mitochondrial-like protein [Nannochloropsis gaditana]) HSP 1 Score: 359.0 bits (920), Expect = 1.500e-95 Identity = 224/315 (71.11%), Postives = 249/315 (79.05%), Query Frame = 0 Query: 1 MAGLVIVVTKAAGPSTRRALLARARGGAARRPLSTGGVS----SASTGLPTTATTHLLLPKRYQPSSMLVPLLGTQMNGCMRRTGGWRG-QSRGG-NXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGPPEDGEKIGFMRGLAYLTVAVIAAGSLYFIVDELMPSRTSANHLFNEAFDAVKQNHDVLNRYGEPLKGYGRDGGGRREGRRNFVEHKNYVGEDGSKRLRIRFNIEGPFGHAFVFAEVTSDMPKGQWMYLLVQDIQTGRVMTLEDNRAMHQALAKSASPEERAALQALIQSGGSQR 310 M LV V++KAAGP TRR +L + GG RRPL++ +A T T + LL+ R++PSS++ LLG + NGC RR+G W G RGG + XXXXXXXXXXXXXXXXXXXX PPE+GEKIGFMRGLAYLTVA IAAGSLYFIVDELMPSR SAN+LFNEAFD VK NH+VLNRYGEPLKGYGRDGGGRREGRRNFVEHKNYVGEDGSKRLRIRFNIEGPFGHAFVFAEVT+DMPKGQWMYLLVQD+QTGRVMTLEDNRAM++A++KSASPEERAALQALIQSGGSQR Sbjct: 42 MTSLVTVMSKAAGPCTRR-VLPMSVGGTGRRPLTSRARPCLNYAADTMRGTLVSRRLLV--RHEPSSLVGRLLGARGNGCARRSGVWLGPDGRGGHSLQLVCKASLSSKKGGPKEGXXXXXXXXXXXXXXXXXXXXIHDDPPEEGEKIGFMRGLAYLTVAAIAAGSLYFIVDELMPSRMSANYLFNEAFDVVKANHEVLNRYGEPLKGYGRDGGGRREGRRNFVEHKNYVGEDGSKRLRIRFNIEGPFGHAFVFAEVTADMPKGQWMYLLVQDMQTGRVMTLEDNRAMYEAMSKSASPEERAALQALIQSGGSQR 353
BLAST of NO02G02390 vs. NCBI_GenBank
Match: XP_002176581.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC51044.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 154.5 bits (389), Expect = 5.500e-34 Identity = 80/158 (50.63%), Postives = 109/158 (68.99%), Query Frame = 0 Query: 153 VAVIAAGSLYFIVDELMPSRTSANHLFNEAFDAVKQNHDVLNRYGEPLKGYGRDGGGRREGRRNFVEHKNYV-GEDGSKRLRIRFNIEGPFGHAFVFAEVTSDMPKGQWMYLLVQDIQTGRVMTLEDNR-AMHQALAKSASPEERAALQALIQSGGSQ 309 +AV AA Y+I EL P++ S N +F+ +F A++ + +V RYG+ LK YGRD GG REGRRNF+EH Y EDGSKR R+R+N+EG FG AFVFAEV++ MP G+++Y+LVQD GRV T+ DNR A+ A S S E ++A+ L+ GG + Sbjct: 88 IAVFAACCAYYIGRELFPTKMSPNRVFDRSFAAIRADSEVQRRYGDNLKAYGRDHGGHREGRRNFIEHTEYTDAEDGSKRTRVRYNLEGRFGTAFVFAEVSASMPSGEFVYILVQDKSNGRVHTVVDNRAALTAARLASGSKEAQSAMSQLLGGGGQK 245
BLAST of NO02G02390 vs. NCBI_GenBank
Match: XP_002289252.1 (predicted protein [Thalassiosira pseudonana CCMP1335] >EED92789.1 predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 147.5 bits (371), Expect = 6.800e-32 Identity = 78/172 (45.35%), Postives = 115/172 (66.86%), Query Frame = 0 Query: 139 GEKIGFMRGLAYLTVA-VIAAGSLYFIVDELMPSRTSANHLFNEAFDAVKQNHDVLNRYGEPLKGYGRDGGGRREGRRNFVEHKNYVG-EDGSKRLRIRFNIEGPFGHAFVFAEVTSDMPKGQWMYLLVQDIQTGRVMTLEDNRAMHQALAKSASPEERAALQALIQSGGSQ 309 GEK+ L + A A+ Y+I EL+P++ S N++F++A +++N +V R+GE K YGRD GG REGRRNF+EH YV +DG+KR R+RFN+EG +G+AFVFAEV+ DMP G+++YLLVQD + G+V+T+ DNR+ A + +E A + A + GG + Sbjct: 125 GEKVVVGTRLFFWAGAFAFASVCAYYIGKELIPTKMSPNNVFDKATSIIRENAEVKRRFGEAFKTYGRDHGGHREGRRNFIEHTEYVSPDDGTKRTRVRFNLEGQYGNAFVFAEVSKDMPSGEFVYLLVQDKRNGQVITVVDNRSALLAKRMAGGSQEGADVFANLLGGGKK 296
BLAST of NO02G02390 vs. NCBI_GenBank
Match: EJK66897.1 (hypothetical protein THAOC_12135 [Thalassiosira oceanica]) HSP 1 Score: 146.4 bits (368), Expect = 1.500e-31 Identity = 77/168 (45.83%), Postives = 110/168 (65.48%), Query Frame = 0 Query: 139 GEKIGFMRGLAYLTVAVIAAGSLYFIVDELMPSRTSANHLFNEAFDAVKQNHDVLNRYGEPLKGYGRDGGGRREGRRNFVEHKNYVGEDGSKRLRIRFNIEGPFGHAFVFAEVTSDMPKGQWMYLLVQDIQTGRVMTLEDNRAMHQALAKSASPEERAALQALIQSGG 307 G ++ F G A+ +V A Y+I EL+P++ S N F+ A A++QN +V R+GE K YGRD GG REGRRNF+EH Y EDG+KR R+RFN+EG +G AFVFAEV+++M G+++Y+LVQD + G V+T++DNRA A + +E + A + GG Sbjct: 83 GTRLFFWAG-AFAFASVCA----YYIGKELLPTKMSPNTTFDRATSAIRQNEEVKRRFGEGFKTYGRDHGGHREGRRNFIEHTEYTAEDGTKRTRVRFNLEGQYGSAFVFAEVSNEMASGEFVYILVQDKRNGAVITVQDNRAALLARQLAGGNKEGQDVFANLLGGG 245
BLAST of NO02G02390 vs. NCBI_GenBank
Match: CBN78209.1 (Mitochondrial import inner membrane translocase TIM21-like protein [Ectocarpus siliculosus]) HSP 1 Score: 144.1 bits (362), Expect = 7.500e-31 Identity = 72/163 (44.17%), Postives = 103/163 (63.19%), Query Frame = 0 Query: 141 KIGFMRGLAYLTVAVIAAGSLYFIVDELMPSRTSANHLFNEAFDAVKQNHDVLNRYGEPLKGYGRDGGGRREGRRNFVEHKNYVGE-DGSKRLRIRFNIEGPFGHAFVFAEVTSDMPKGQWMYLLVQDIQTGRVMTLEDNRAMHQALAKSASPEERAALQALI 303 KI ++ +A + V + +L + EL PS + + + A D + + D N +G PLKGYGRD REGRRNFVEH ++ D SKR R+RFN+EGP GH +AEV++ M G+W+YL VQD+QTG V+TL DNRA+ A A++ S EE+ A + ++ Sbjct: 41 KISIVKTVAGVCVLGLVVAALSATITELWPSHMAPQSIMSHAHDVFQADPDTANHFGTPLKGYGRDNNRHREGRRNFVEHVDHEDPIDKSKRTRVRFNVEGPHGHGMAYAEVSNKMESGEWVYLCVQDLQTGHVITLHDNRALLMAQAQAGSDEEKNAFRKML 203
BLAST of NO02G02390 vs. NCBI_GenBank
Match: GAX99737.1 (Hypothetical protein PINS_007588 [Pythium insidiosum]) HSP 1 Score: 143.7 bits (361), Expect = 9.800e-31 Identity = 75/152 (49.34%), Postives = 100/152 (65.79%), Query Frame = 0 Query: 156 IAAGSLYFIVDELMPSRTSANHLFNEAFDAVKQNHDVLNRYGEPLKGYGRDGGGRREGRRNFVEHKNYVGEDGSKRLRIRFNIEGPFGHAFVFAEVTSDMPKGQWMYLLVQDIQTGRVMTLEDNRAMHQALAKSASPEERAALQALIQSGGS 308 + A +Y ++ ELMP+R S N LF E+ D V +N DV +R G P+ GYG D GG REGRRN VEH + + G+ RLRI++NI+GP GHAFVFAEV DM KG+++YL+VQ +TG V+ + DNR Q LA + E+ A Q L S + Sbjct: 97 LGAAGIYMVIRELMPNRMSPNGLFGESLDIVSENTDVTSRLGMPIHGYGHDHGGHREGRRNRVEHVDLKDKXGNPRLRIKYNIKGPAGHAFVFAEVNHDMKKGEYVYLIVQFTKTGEVVKIIDNR---QILAADSKEEQDALRQLLGNSNAA 245
BLAST of NO02G02390 vs. NCBI_GenBank
Match: XP_009528032.1 (hypothetical protein PHYSODRAFT_286140 [Phytophthora sojae] >EGZ18974.1 hypothetical protein PHYSODRAFT_286140 [Phytophthora sojae]) HSP 1 Score: 142.9 bits (359), Expect = 1.700e-30 Identity = 72/153 (47.06%), Postives = 105/153 (68.63%), Query Frame = 0 Query: 150 YLTVAVIAAGSLYFIVDELMPSRTSANHLFNEAFDAVKQNHDVLNRYGEPLKGYGRDGGGRREGRRNFVEHKNYVGEDGSKRLRIRFNIEGPFGHAFVFAEVTSDMPKGQWMYLLVQDIQTGRVMTLEDNRAMHQALAKSASPEERAALQALI 303 +L + + A +YF+ EL+P+R S N LF+E+ D + +N DV +R G P+ GYG D GG REGRRN +EH N +DG+ RLRI++NI+GP GHA+VFAEV DM K +++YL+VQ +TG ++ + DNR + A +K EE+ AL+ L+ Sbjct: 83 WLGLIGLGAVGVYFVARELLPNRMSPNGLFSESLDFLSENTDVTSRLGLPIHGYGHDHGGHREGRRNRIEHVNLKAKDGTPRLRIKYNIKGPTGHAYVFAEVNQDMKKNEYVYLIVQVTKTGELLKIVDNRQILSAESK----EEQDALRQLL 231
BLAST of NO02G02390 vs. NCBI_GenBank
Match: OWZ04396.1 (Transmembrane protein [Phytophthora megakarya]) HSP 1 Score: 142.9 bits (359), Expect = 1.700e-30 Identity = 74/153 (48.37%), Postives = 106/153 (69.28%), Query Frame = 0 Query: 150 YLTVAVIAAGSLYFIVDELMPSRTSANHLFNEAFDAVKQNHDVLNRYGEPLKGYGRDGGGRREGRRNFVEHKNYVGEDGSKRLRIRFNIEGPFGHAFVFAEVTSDMPKGQWMYLLVQDIQTGRVMTLEDNRAMHQALAKSASPEERAALQALI 303 +L + + A +YF+ EL+P+R S N LF+E+ D V N DV +R G P+ GYG D GG REGRRN +EH N +DG+ RLRI++NI+GP GHA+VFAEV +M K +++YL+VQ +TG ++ + DNR Q LA + +PEE+ AL+ L+ Sbjct: 78 WLGLIGLGAVGVYFVARELLPNRMSPNGLFSESLDFVSDNTDVSSRLGLPIHGYGHDHGGHREGRRNRIEHVNLKAKDGTPRLRIKYNIKGPSGHAYVFAEVNQNMKKNEYVYLIVQITKTGELLKIVDNR---QILA-AETPEEQDALRQLL 226
BLAST of NO02G02390 vs. NCBI_GenBank
Match: ETP30164.1 (hypothetical protein F442_20773 [Phytophthora parasitica P10297]) HSP 1 Score: 140.6 bits (353), Expect = 8.300e-30 Identity = 72/155 (46.45%), Postives = 102/155 (65.81%), Query Frame = 0 Query: 147 GLAYLTVAVIAAGSLYFIVDELMPSRTSANHLFNEAFDAVKQNHDVLNRYGEPLKGYGRDGGGRREGRRNFVEHKNYVGEDGSKRLRIRFNIEGPFGHAFVFAEVTSDMPKGQWMYLLVQDIQTGRVMTLEDNRAMHQALAKSASPEERAALQAL 302 G +L + + A +YF+ EL+P+R S N LF+E+ D + +N DV +R G P+ GYG D GG REGRRN +EH N +DG+ RLRI++NI+GP GHA+VFAEV +M K +++YL+VQ +TG ++ + DNR Q LA E+ A Q L Sbjct: 76 GSFWLGLIGLGAVGVYFVARELLPNRMSPNGLFSESLDFLSENTDVTSRLGLPIHGYGHDHGGHREGRRNRIEHVNLQAKDGTPRLRIKYNIKGPSGHAYVFAEVNKNMKKNEYVYLIVQVTKTGELLKIVDNR---QILAAETKEEQDALRQLL 227
BLAST of NO02G02390 vs. NCBI_GenBank
Match: ETP30165.1 (hypothetical protein, variant [Phytophthora parasitica P10297]) HSP 1 Score: 140.6 bits (353), Expect = 8.300e-30 Identity = 72/155 (46.45%), Postives = 102/155 (65.81%), Query Frame = 0 Query: 147 GLAYLTVAVIAAGSLYFIVDELMPSRTSANHLFNEAFDAVKQNHDVLNRYGEPLKGYGRDGGGRREGRRNFVEHKNYVGEDGSKRLRIRFNIEGPFGHAFVFAEVTSDMPKGQWMYLLVQDIQTGRVMTLEDNRAMHQALAKSASPEERAALQAL 302 G +L + + A +YF+ EL+P+R S N LF+E+ D + +N DV +R G P+ GYG D GG REGRRN +EH N +DG+ RLRI++NI+GP GHA+VFAEV +M K +++YL+VQ +TG ++ + DNR Q LA E+ A Q L Sbjct: 39 GSFWLGLIGLGAVGVYFVARELLPNRMSPNGLFSESLDFLSENTDVTSRLGLPIHGYGHDHGGHREGRRNRIEHVNLQAKDGTPRLRIKYNIKGPSGHAYVFAEVNKNMKKNEYVYLIVQVTKTGELLKIVDNR---QILAAETKEEQDALRQLL 190 The following BLAST results are available for this feature:
BLAST of NO02G02390 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO02G02390 ID=NO02G02390|Name=NO02G02390|organism=Nannochloropsis oceanica|type=gene|length=930bpback to top protein sequence of NO02G02390.1 >NO02G02390.1-protein ID=NO02G02390.1-protein|Name=NO02G02390.1|organism=Nannochloropsis oceanica|type=polypeptide|length=310bpback to top Synonyms
Publications
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