NO02G02300, NO02G02300 (gene) Nannochloropsis oceanica

Overview
NameNO02G02300
Unique NameNO02G02300
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1755
Alignment locationchr2:646803..648557 +

Link to JBrowse

Properties
Property NameValue
DescriptionNadh dehydrogenase subunit 11
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr2genomechr2:646803..648557 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PXD0087212019-04-30
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0051536iron-sulfur cluster binding
GO:0009055electron transfer activity
GO:0016491oxidoreductase activity
GO:0005488binding
GO:0003824catalytic activity
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
GO:0006091generation of precursor metabolites and energy
Vocabulary: INTERPRO
TermDefinition
IPR0360102Fe-2S_ferredoxin-like_sf
IPR0010412Fe-2S_ferredoxin-type
IPR019574NADH_UbQ_OxRdtase_Gsu_4Fe4S-bd
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Homology
[Close]
BLAST of NO02G02300 vs. NCBI_GenBank
Match: EWM30424.1 (nadh dehydrogenase subunit 11 [Nannochloropsis gaditana])

HSP 1 Score: 517.3 bits (1331), Expect = 3.400e-143
Identity = 264/324 (81.48%), Postives = 274/324 (84.57%), Query Frame = 0 
Query:    1 MSNLTRLFVNDIEVFVPPNTTVLEAAEKVGVQVPRFCYHPALSIAGNCRMCLVEIERTPKPVASCAMPVMKDMKVYTNSPLVKKAREAVLEFLLLNHPLDCPICDQGGECDLQDQTMLYASDRSRFYEFKRGVEDKNLGPFIKTIMTRCIHCTRCVRFADEIAGVGDMGTTNRGRDTEIGTYIGKAFESEVSGNVIDLCPVGALTGKTYSFSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPSCTRGAAAMGVMSQRALSCSFTSVFHLQKAGMNPQDFQKVTTLFKRSVIFPMAALVTGATVATIGAAV 325
            MSNLTRLFVNDIEVFVPPNTTVLEAAEKVGVQVPRFCYHPALSIAGNCRMCLVEIERTPKPVASCAMPVMKDMKV+TNSPLVKKAREAVLEFLLLNHPLDCPICDQGGECDLQDQTMLYASDRSRFYEFKRGVEDKNLGPFIKTIMTRCIHCTRCVRFADEIAGVGDMGTTNRGRDTEIGTYIGKAFESEVSGNVIDLCPVGALTGKTYSF                                            P  ++G AAMGVMS+RALSCSFTSVFHLQKAGM PQDFQKVT+LFKRSVI PMAAL++GA VA++GA+V
Sbjct:    1 MSNLTRLFVNDIEVFVPPNTTVLEAAEKVGVQVPRFCYHPALSIAGNCRMCLVEIERTPKPVASCAMPVMKDMKVFTNSPLVKKAREAVLEFLLLNHPLDCPICDQGGECDLQDQTMLYASDRSRFYEFKRGVEDKNLGPFIKTIMTRCIHCTRCVRFADEIAGVGDMGTTNRGRDTEIGTYIGKAFESEVSGNVIDLCPVGALTGKTYSF--PLSTSSAASTALAARATARPLSMPQRPALTPGLNTAPLKPSYPPASQG-AAMGVMSRRALSCSFTSVFHLQKAGMAPQDFQKVTSLFKRSVILPMAALISGAAVASVGASV 321
[Close]
BLAST of NO02G02300 vs. NCBI_GenBank
Match: AMK98472.1 (NADH dehydrogenase subunit 11 (mitochondrion) [Monodopsis sp. MarTras21])

HSP 1 Score: 476.5 bits (1225), Expect = 6.700e-131
Identity = 242/323 (74.92%), Postives = 258/323 (79.88%), Query Frame = 0 
Query:    1 MSNLTRLFVNDIEVFVPPNTTVLEAAEKVGVQVPRFCYHPALSIAGNCRMCLVEIERTPKPVASCAMPVMKDMKVYTNSPLVKKAREAVLEFLLLNHPLDCPICDQGGECDLQDQTMLYASDRSRFYEFKRGVEDKNLGPFIKTIMTRCIHCTRCVRFADEIAGVGDMGTTNRGRDTEIGTYIGKAFESEVSGNVIDLCPVGALTGKTYSFSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPSCTRGAAAMGVMSQRALSCSFTSVFHLQKAGMNPQDFQKVTTLFKRSVIFPMAALVTGATVATIGAA 324
            MSNL ++ VNDI+VFVPPNTTVLEAAEKVGVQVPRFCYHPALSIAGNCRMCLVEIERTPKPVASCAMPVM +MKVYTNSPLVKKAREAVLEFLLLNHPLDCPICDQGGECDLQDQTMLYASDRSRFY+FKR VEDKNLGPF+KTIMTRCIHCTRCVRFADEIAGVGD+GTTNRGRDTEIGTYIGKAFESEVSGNVIDLCPVGA+T KTY F+                                                 ++A GVMS+RALSCSFTSVFHLQKAGM   +F +VT LFK +VI PMA LVTGA VAT+GAA
Sbjct:    1 MSNLIKVSVNDIDVFVPPNTTVLEAAEKVGVQVPRFCYHPALSIAGNCRMCLVEIERTPKPVASCAMPVMPNMKVYTNSPLVKKAREAVLEFLLLNHPLDCPICDQGGECDLQDQTMLYASDRSRFYDFKRSVEDKNLGPFVKTIMTRCIHCTRCVRFADEIAGVGDIGTTNRGRDTEIGTYIGKAFESEVSGNVIDLCPVGAITHKTYKFNNNKKEAVAPLPTASTKMLFGTNGAGLGRPAM------------------SSAEGVMSRRALSCSFTSVFHLQKAGMKAAEFARVTRLFKHAVIAPMAVLVTGAAVATMGAA 305
[Close]
BLAST of NO02G02300 vs. NCBI_GenBank
Match: AMK98471.1 (NADH dehydrogenase subunit 11 (mitochondrion) [Vischeria sp. CAUP Q 202])

HSP 1 Score: 455.7 bits (1171), Expect = 1.200e-124
Identity = 231/323 (71.52%), Postives = 254/323 (78.64%), Query Frame = 0 
Query:    4 LTRLFVNDIEVFVPPNTTVLEAAEKVGVQVPRFCYHPALSIAGNCRMCLVEIERTPKPVASCAMPVMKDMKVYTNSPLVKKAREAVLEFLLLNHPLDCPICDQGGECDLQDQTMLYASDRSRFYEFKRGVEDKNLGPFIKTIMTRCIHCTRCVRFADEIAGVGDMGTTNRGRDTEIGTYIGKAFESEVSGNVIDLCPVGALTGKTYSFSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPSCTRG---AAAMGVMSQRALSCSFTSVFHLQKAGMNPQDFQKVTTLFKRSVIFPMAALVTG-ATVATIGA 323
            LTR+F+NDIEV+VPPNTTVLEAAEKVGVQVPRFCYHP LSIAGNCRMCLVEIERTPKPVASCAMPVMKDMKVYT+SPLVKKAREAV+EFLLLNHPLDCPICDQGGECDLQDQTM+Y SDRSRFYE KRGVEDKNLGPFIKTIMTRCIHCTRCVRFA+E+AGV D+GTTNRGR+TEIGTYIGKAFESEVSGNVIDLCPVGA+T K Y+F                                            P+  R    ++A  VMS+RALSCSFTSVFHLQKAGM P+D QKVT++FK++V+ PMA    G A VA + A
Sbjct:    7 LTRVFINDIEVYVPPNTTVLEAAEKVGVQVPRFCYHPELSIAGNCRMCLVEIERTPKPVASCAMPVMKDMKVYTDSPLVKKAREAVIEFLLLNHPLDCPICDQGGECDLQDQTMIYGSDRSRFYEPKRGVEDKNLGPFIKTIMTRCIHCTRCVRFAEEVAGVPDLGTTNRGRETEIGTYIGKAFESEVSGNVIDLCPVGAITHKQYAFK----------------------------------GAPLTAGLLPTLVRSSVPSSAEAVMSRRALSCSFTSVFHLQKAGMRPKDLQKVTSVFKKAVVLPMAVFAGGAAAVAAMSA 295
[Close]
BLAST of NO02G02300 vs. NCBI_GenBank
Match: AMK98473.1 (NADH dehydrogenase subunit 11 (mitochondrion) [Trachydiscus minutus])

HSP 1 Score: 385.6 bits (989), Expect = 1.600e-103
Identity = 181/213 (84.98%), Postives = 195/213 (91.55%), Query Frame = 0 
Query:    1 MSNLTRLFVNDIEVFVPPNTTVLEAAEKVGVQVPRFCYHPALSIAGNCRMCLVEIE-RTPKPVASCAMPVMKDMKVYTNSPLVKKAREAVLEFLLLNHPLDCPICDQGGECDLQDQTMLYASDRSRFYEFKRGVEDKNLGPFIKTIMTRCIHCTRCVRFADEIAGVGDMGTTNRGRDTEIGTYIGKAFESEVSGNVIDLCPVGALTGKTYSFS 213
            MSNL R+FVND EVFVPP T+VLEA EK+GVQ+PRFCYHP LSIAGNCRMCLVEI    PKP ASCAMPVMKDMKV+TNSPLVKKAREAV+EFLLLNHPLDCPICDQGGECDLQDQTM + SDRSRFY+FKRGVED N GPF+KTIMTRCIHCTRCVR+ADEIAGV D+GTTNRG+ TEIGTYIGKAFESEVSGNVIDLCPVGALT K+Y F+
Sbjct:    1 MSNLVRVFVNDNEVFVPPGTSVLEACEKIGVQIPRFCYHPELSIAGNCRMCLVEISPGPPKPQASCAMPVMKDMKVFTNSPLVKKAREAVIEFLLLNHPLDCPICDQGGECDLQDQTMNFGSDRSRFYQFKRGVEDHNYGPFVKTIMTRCIHCTRCVRYADEIAGVADLGTTNRGQATEIGTYIGKAFESEVSGNVIDLCPVGALTSKSYKFT 213
[Close]
BLAST of NO02G02300 vs. NCBI_GenBank
Match: OUU67737.1 (hypothetical protein CBC26_05530 [Synechococcus sp. TMED66])

HSP 1 Score: 352.4 bits (903), Expect = 1.500e-93
Identity = 155/208 (74.52%), Postives = 187/208 (89.90%), Query Frame = 0 
Query:    4 LTRLFVNDIEVFVPPNTTVLEAAEKVGVQVPRFCYHPALSIAGNCRMCLVEIERTPKPVASCAMPVMKDMKVYTNSPLVKKAREAVLEFLLLNHPLDCPICDQGGECDLQDQTMLYASDRSRFYEFKRGVEDKNLGPFIKTIMTRCIHCTRCVRFADEIAGVGDMGTTNRGRDTEIGTYIGKAFESEVSGNVIDLCPVGALTGKTYSF 212
            + ++F+N+   +VP N+TVLEA E +G++VPRFC+H  LS+AGNCRMCLVE+E++PKPVASCAMPVM +M+V+T++PLVKKARE VLEFLL+NHPLDCPICDQGGECDLQDQ M + SD+SRF+E+KRGVEDKN GP IKTIMTRCIHCTRCVRFA +IAGV D+GTTNRGRDTEIGTY+GK F+SE+SGNV+DLCPVGALT K Y+F
Sbjct:    1 MVKVFINNEITYVPSNSTVLEACESIGIEVPRFCFHERLSVAGNCRMCLVELEKSPKPVASCAMPVMNNMQVFTDTPLVKKAREGVLEFLLMNHPLDCPICDQGGECDLQDQAMFFGSDKSRFFEYKRGVEDKNCGPLIKTIMTRCIHCTRCVRFAMDIAGVEDLGTTNRGRDTEIGTYVGKIFQSELSGNVVDLCPVGALTSKPYTF 208
[Close]
BLAST of NO02G02300 vs. NCBI_GenBank
Match: ACS27143.1 (NADH dehydrogenase subunit 11 (mitochondrion) [Heterosigma akashiwo])

HSP 1 Score: 345.5 bits (885), Expect = 1.800e-91
Identity = 156/207 (75.36%), Postives = 182/207 (87.92%), Query Frame = 0 
Query:    6 RLFVNDIEVFVPPNTTVLEAAEKVGVQVPRFCYHPALSIAGNCRMCLVEIERTPKPVASCAMPVMKDMKVYTNSPLVKKAREAVLEFLLLNHPLDCPICDQGGECDLQDQTMLYASDRSRFYEFKRGVEDKNLGPFIKTIMTRCIHCTRCVRFADEIAGVGDMGTTNRGRDTEIGTYIGKAFESEVSGNVIDLCPVGALTGKTYSFS 213
            ++++N+IEV V PNTTVLEA   VG+ VPRFCYH  LS+AGNCRMCLVEIE+ PKPVA+CAMPV  +MKV+T++PLVKKARE VLEFLLLNHPLDCPICDQGGECDLQ+Q M+Y SDRSRFYE KR VEDKN GP IKTIMTRCIHCTRCVRFA E+AGV D+GTTNRG+DTEIGT+I K  ++E+SGN++DLCPVGALT K Y+F+
Sbjct:    2 KVYINNIEVEVAPNTTVLEACSVVGIDVPRFCYHQELSVAGNCRMCLVEIEKAPKPVAACAMPVSPNMKVFTDTPLVKKAREGVLEFLLLNHPLDCPICDQGGECDLQEQVMVYGSDRSRFYEVKRSVEDKNCGPLIKTIMTRCIHCTRCVRFAAEVAGVPDLGTTNRGQDTEIGTFIEKTIQTELSGNLVDLCPVGALTSKPYAFN 208
[Close]
BLAST of NO02G02300 vs. NCBI_GenBank
Match: ACS27182.1 (NADH dehydrogenase subunit 11 (mitochondrion) [Heterosigma akashiwo])

HSP 1 Score: 345.5 bits (885), Expect = 1.800e-91
Identity = 156/207 (75.36%), Postives = 182/207 (87.92%), Query Frame = 0 
Query:    6 RLFVNDIEVFVPPNTTVLEAAEKVGVQVPRFCYHPALSIAGNCRMCLVEIERTPKPVASCAMPVMKDMKVYTNSPLVKKAREAVLEFLLLNHPLDCPICDQGGECDLQDQTMLYASDRSRFYEFKRGVEDKNLGPFIKTIMTRCIHCTRCVRFADEIAGVGDMGTTNRGRDTEIGTYIGKAFESEVSGNVIDLCPVGALTGKTYSFS 213
            ++++N+IEV V PNTTVLEA   VG+ VPRFCYH  LS+AGNCRMCLVEIE+ PKPVA+CAMPV  +MKV+T++PLVKKARE VLEFLLLNHPLDCPICDQGGECDLQ+Q M+Y SDRSRFYE KR VEDKN GP IKTIMTRCIHCTRCVRFA E+AGV D+GTTNRG+DTEIGT+I K  ++E+SGN++DLCPVGALT K Y+F+
Sbjct:    2 KVYINNIEVEVAPNTTVLEACSVVGIDVPRFCYHQELSVAGNCRMCLVEIEKAPKPVAACAMPVSPNMKVFTDTPLVKKAREGVLEFLLLNHPLDCPICDQGGECDLQEQVMVYGSDRSRFYEVKRSVEDKNCGPLIKTIMTRCIHCTRCVRFAAEVAGVPDLGTTNRGQDTEIGTFIEKTIQTELSGNLVDLCPVGALTSKPYAFN 208
[Close]
BLAST of NO02G02300 vs. NCBI_GenBank
Match: YP_005090283.1 (NADH dehydrogenase subunit 11 (mitochondrion) [Heterosigma akashiwo] >BAI70597.1 NADH dehydrogenase subunit 11 (mitochondrion) [Heterosigma akashiwo])

HSP 1 Score: 345.5 bits (885), Expect = 1.800e-91
Identity = 156/207 (75.36%), Postives = 182/207 (87.92%), Query Frame = 0 
Query:    6 RLFVNDIEVFVPPNTTVLEAAEKVGVQVPRFCYHPALSIAGNCRMCLVEIERTPKPVASCAMPVMKDMKVYTNSPLVKKAREAVLEFLLLNHPLDCPICDQGGECDLQDQTMLYASDRSRFYEFKRGVEDKNLGPFIKTIMTRCIHCTRCVRFADEIAGVGDMGTTNRGRDTEIGTYIGKAFESEVSGNVIDLCPVGALTGKTYSFS 213
            ++++N+IEV V PNTTVLEA   VG+ VPRFCYH  LS+AGNCRMCLVEIE+ PKPVA+CAMPV  +MKV+T++PLVKKARE VLEFLLLNHPLDCPICDQGGECDLQ+Q M+Y SDRSRFYE KR VEDKN GP IKTIMTRCIHCTRCVRFA E+AGV D+GTTNRG+DTEIGT+I K  ++E+SGN++DLCPVGALT K Y+F+
Sbjct:    2 KVYINNIEVEVAPNTTVLEACSVVGIDVPRFCYHQELSVAGNCRMCLVEIEKAPKPVAACAMPVSPNMKVFTDTPLVKKAREGVLEFLLLNHPLDCPICDQGGECDLQEQVMVYGSDRSRFYEVKRSVEDKNCGPLIKTIMTRCIHCTRCVRFAAEVAGVPDLGTTNRGQDTEIGTFIEKTIQTELSGNLVDLCPVGALTSKPYAFN 208
[Close]
BLAST of NO02G02300 vs. NCBI_GenBank
Match: AOT84810.1 (NADH dehydrogenase subunit 11 (mitochondrion) [Heterosigma akashiwo])

HSP 1 Score: 345.5 bits (885), Expect = 1.800e-91
Identity = 156/207 (75.36%), Postives = 182/207 (87.92%), Query Frame = 0 
Query:    6 RLFVNDIEVFVPPNTTVLEAAEKVGVQVPRFCYHPALSIAGNCRMCLVEIERTPKPVASCAMPVMKDMKVYTNSPLVKKAREAVLEFLLLNHPLDCPICDQGGECDLQDQTMLYASDRSRFYEFKRGVEDKNLGPFIKTIMTRCIHCTRCVRFADEIAGVGDMGTTNRGRDTEIGTYIGKAFESEVSGNVIDLCPVGALTGKTYSFS 213
            ++++N+IEV V PNTTVLEA   VG+ VPRFCYH  LS+AGNCRMCLVEIE+ PKPVA+CAMPV  +MKV+T++PLVKKARE VLEFLLLNHPLDCPICDQGGECDLQ+Q M+Y SDRSRFYE KR VEDKN GP IKTIMTRCIHCTRCVRFA E+AGV D+GTTNRG+DTEIGT+I K  ++E+SGN++DLCPVGALT K Y+F+
Sbjct:    2 KVYINNIEVEVAPNTTVLEACSVVGIDVPRFCYHQELSVAGNCRMCLVEIEKAPKPVAACAMPVSPNMKVFTDTPLVKKAREGVLEFLLLNHPLDCPICDQGGECDLQEQVMVYGSDRSRFYEVKRSVEDKNCGPLIKTIMTRCIHCTRCVRFAAEVAGVPDLGTTNRGQDTEIGTFIEKTIQTELSGNLVDLCPVGALTSKPYAFN 208
[Close]
BLAST of NO02G02300 vs. NCBI_GenBank
Match: AOT84852.1 (NADH dehydrogenase subunit 11 (mitochondrion) [Heterosigma akashiwo] >AOT84894.1 NADH dehydrogenase subunit 11 (mitochondrion) [Heterosigma akashiwo])

HSP 1 Score: 345.5 bits (885), Expect = 1.800e-91
Identity = 156/207 (75.36%), Postives = 182/207 (87.92%), Query Frame = 0 
Query:    6 RLFVNDIEVFVPPNTTVLEAAEKVGVQVPRFCYHPALSIAGNCRMCLVEIERTPKPVASCAMPVMKDMKVYTNSPLVKKAREAVLEFLLLNHPLDCPICDQGGECDLQDQTMLYASDRSRFYEFKRGVEDKNLGPFIKTIMTRCIHCTRCVRFADEIAGVGDMGTTNRGRDTEIGTYIGKAFESEVSGNVIDLCPVGALTGKTYSFS 213
            ++++N+IEV V PNTTVLEA   VG+ VPRFCYH  LS+AGNCRMCLVEIE+ PKPVA+CAMPV  +MKV+T++PLVKKARE VLEFLLLNHPLDCPICDQGGECDLQ+Q M+Y SDRSRFYE KR VEDKN GP IKTIMTRCIHCTRCVRFA E+AGV D+GTTNRG+DTEIGT+I K  ++E+SGN++DLCPVGALT K Y+F+
Sbjct:    2 KVYINNIEVEVAPNTTVLEACSVVGIDVPRFCYHQELSVAGNCRMCLVEIEKAPKPVAACAMPVSPNMKVFTDTPLVKKAREGVLEFLLLNHPLDCPICDQGGECDLQEQVMVYGSDRSRFYEVKRSVEDKNCGPLIKTIMTRCIHCTRCVRFAAEVAGVPDLGTTNRGQDTEIGTFIEKTIQTELSGNLVDLCPVGALTSKPYAFN 208
The following BLAST results are available for this feature:
BLAST of NO02G02300 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM30424.13.400e-14381.48nadh dehydrogenase subunit 11 [Nannochloropsis gad... [more]
AMK98472.16.700e-13174.92NADH dehydrogenase subunit 11 (mitochondrion) [Mon... [more]
AMK98471.11.200e-12471.52NADH dehydrogenase subunit 11 (mitochondrion) [Vis... [more]
AMK98473.11.600e-10384.98NADH dehydrogenase subunit 11 (mitochondrion) [Tra... [more]
OUU67737.11.500e-9374.52hypothetical protein CBC26_05530 [Synechococcus sp... [more]
ACS27143.11.800e-9175.36NADH dehydrogenase subunit 11 (mitochondrion) [Het... [more]
ACS27182.11.800e-9175.36NADH dehydrogenase subunit 11 (mitochondrion) [Het... [more]
YP_005090283.11.800e-9175.36NADH dehydrogenase subunit 11 (mitochondrion) [Het... [more]
AOT84810.11.800e-9175.36NADH dehydrogenase subunit 11 (mitochondrion) [Het... [more]
AOT84852.11.800e-9175.36NADH dehydrogenase subunit 11 (mitochondrion) [Het... [more]

Pages

back to top
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL016nonsL016Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR032ncniR032Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR002ngnoR002Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR000ngnoR000Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK006872NSK006872Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO02G02300.1NO02G02300.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|574247gene_817Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100210g4gene233Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO02G02300.1NO02G02300.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO02G02300 ID=NO02G02300|Name=NO02G02300|organism=Nannochloropsis oceanica|type=gene|length=1755bp
AACTATAGGGCAAAGAATCAGCCAGCGGTTCCGCCCGCGGTCTGTAGTTA
AGCGCACTTTCGAGGGAGGCAATAACACAATCTGCTCTCGCCCAACGCCG
TCATCATCAGTCCTTGGTTATTCATAGCTAGCCTTTGCAGCAGCCGTAAA
CATGAGCAACCTTACACGGCTCTTTGTCAATGACATCGAGGTCTTTGTCC
CCCCAAACACGACGGTCTTGGAGGCGGCCGAGAAAGTGGGCGTCCAGgta
agtttggctctttgtaagagggaggggtagggaggagaggtttcgttgct
tgctgtgtcaggctcagaaagcatgtggatcgcgcatgacagcttatgac
aaacattctgtcagtggcatggtcttgattgtcttggaaggcgaggcgag
gtgctagatgggcgaaacgaaaaggggaccagccgagaggagcaaccaca
gcttttcactctgacaacaaaaaacactggaagcaccgggtggagctttt
aaaaaccccaaaccctccatctcatcacattcttgatttcccctctccca
ctttttctttcctccgggatggctcagGTACCGCGCTTCTGCTACCACCC
CGCCCTCTCCATTGCCGGCAACTGCCGCATGTGCCTGGTCGAAATTGAGC
GCACCCCCAAGCCAGTTGCATCTTGCGCGATGCCCGTGATGAAGGACATG
AAGGTCTATACCAACAGCCCATTGGTCAAGAAGGCTCGGGAGGCCGTGCT
GGAGTTCTTGTTGCTGAACCATCCTTTGGACTGCCCCATTTGTGACCAGG
GTGGGGAGTGCGACTTGCAGGACCAGACCATGTTGTACGCGTCTGACAGG
TCCAGATTCTACGAGTTCAAGCGTGGGGTGGAGGACAAGAATTTGGGGCC
TTTTATCAAGACGATTATGACGCGCTGCATTCACTGCACACGCTGTGTGC
GCTTCGCGGATGAGATTGCCGGAGTCGGGGACATGGGCACGACCAACCGG
GGAAGGGACACAGAGATCGGCACTTACATTGGGAAAGCGTTTGAATCCGA
GGTCTCGGGCAACGTTATTGATCTCTGCCCCGTCGGGGCTCTGACGGGCA
AGACCTACTCCTTCTCCTCTTCCTCCGTCCCTTCATCCTCCTCCTCCTCC
GCCACGGCCTCCTCCACCCTGGCCGCCCGTGCTGCCGCGCGTCCCTTACC
AGAACTTTCCACTGCTGCTGCTGCTGCTACTGCTGGCACGTCTGCTCCCT
CTTGCACGCGAGGGGCTGCTGCCATGGGGGTTATGTCTCAACGGGCGCTT
TCATGCTCGTTTACTTCCGTCTTCCACTTGCAGAAGGCCGGCATGAACCC
TCAGGATTTCCAGAAGGTGACCACGTTGTTCAAGCGCTCGGTGATTTTCC
CAATGGCAGCCCTGGTAACGGGCGCAACGGTTGCCACGATTGGTGCGGCC
GTTTAGGGAGGAAGGGAGAGAAGGGTGGGCTTTGTGTGATATCAATGTGC
GTGTGGGGGGGAAGTATTACGATGGTGACGGAAAATATGTTTGCTCATGT
TTTTGACCCGCCCTTTCAAAGTGGTAACAGACATTTAAGTGGTGATGGTG
GGCGTGGGGGTGGCGGAGGAATGGAAGTGAAGGAGAAGAAGGATGAGAGG
TAATGGTAGGATGATAGGGAAAGGTATCTACGAAGAATGAGCTGATAGCT
TGAAAGGAGATTAAGAGGAAGAAGAAGAAGAAGGAGACAGACGACAACTT
GAAGA
back to top

protein sequence of NO02G02300.1

>NO02G02300.1-protein ID=NO02G02300.1-protein|Name=NO02G02300.1|organism=Nannochloropsis oceanica|type=polypeptide|length=325bp
MSNLTRLFVNDIEVFVPPNTTVLEAAEKVGVQVPRFCYHPALSIAGNCRM
CLVEIERTPKPVASCAMPVMKDMKVYTNSPLVKKAREAVLEFLLLNHPLD
CPICDQGGECDLQDQTMLYASDRSRFYEFKRGVEDKNLGPFIKTIMTRCI
HCTRCVRFADEIAGVGDMGTTNRGRDTEIGTYIGKAFESEVSGNVIDLCP
VGALTGKTYSFSSSSVPSSSSSSATASSTLAARAAARPLPELSTAAAAAT
AGTSAPSCTRGAAAMGVMSQRALSCSFTSVFHLQKAGMNPQDFQKVTTLF
KRSVIFPMAALVTGATVATIGAAV*
back to top
Synonyms
Publications