NO02G02240, NO02G02240 (gene) Nannochloropsis oceanica
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Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO02G02240 vs. NCBI_GenBank
Match: EWM30435.1 (dna polymerase kappa [Nannochloropsis gaditana]) HSP 1 Score: 713.8 bits (1841), Expect = 6.200e-202 Identity = 399/629 (63.43%), Postives = 450/629 (71.54%), Query Frame = 0
Query: 140 ATGNTSDTRHFYTFLNDKAGMDENKRSKEEVEKIVHEASKNSKFFLAQQRNDVKIQERIRGIKSKLRTLSEPLRRALESEADKRLIAAEKSRRSYTQVCVVIDLDAFFTSVEERDEPSLKAVPFAVGGGVICTANYEARKYGVRSAMPEFIARKLCPQLLVRQTRFETYSHVAEQTRMIFKEYDPHFRAGSLDEAYLDLTACVQGLVRERGGEVPF------GXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYWSVAEAVVAEIRRRICEVTGVTASAGIATSFCLAKIASNERKPDGQYRVGNVGGFLRHLPVRKVSGIGRITERCLVAGLEIGTCWELWSKRALLYHVYTHQTAHWLVCKSVGLDGXXXXXXXXXXXXXXXXXXXXXGISRERTFAALSRKDDLLEKLRMICDSLAADMAREGLKAKSITLKLKNSDFAITTRAKSCAFYVSTSQELYQHSLSLLLPQLPITLRLMGVRASHFQPKPQAPPKGQGCLEGYVVTSGPNTAVAAGAASGEA-------AAGDLSPFVSSSSYSSPSSL---------PAASQSEAPIVP-----PAYSCPVCSRCLSVGLHDFNQHVDDCLRASDPHF 742
A +T TRHFYTFL DKAGMDE KRS+EEVE+IVHEASKNSKFFLAQQRND+K+QERI+ ++SKL LSEPLRR+LE+EAD+ L AAEK+ R++ QVCVV+DLDAFFTSVEERDEP+L+ VPFAVGGGVI TANYEARKYGVRSAMP FIARKLCPQLLVR TRFE Y VAEQTR IF++YDP FRAGSLDEAYLDLTA V V ++GGE P YW VAE VV EIRRRI VTGVTASAGIATSFCLAK+ASNE KP+GQ+RVG+V FLR PVRKVSGIGRITERCLVAGL++ TC++LW+KRALLYHVYT QTA WL+CKSVGLDG GISRERTFAALSRK+DLLEKLR+ICDSLAADMAREGLKAK++TLKLK+SDFA+TTRAK+CAFYVSTSQELYQH+LSLLLPQLP+TLRLMGVRASHFQPKPQAPPKGQGCLE YV T G A+A SG A + G S S+S+ L PA EA P Y+CP+C++ LSV L + N+HVD CLR SDP+F
Sbjct: 126 ALDSTRHTRHFYTFLGDKAGMDEKKRSREEVERIVHEASKNSKFFLAQQRNDLKVQERIQVMQSKLNMLSEPLRRSLEAEADRELAAAEKAYRTWRQVCVVVDLDAFFTSVEERDEPALREVPFAVGGGVISTANYEARKYGVRSAMPLFIARKLCPQLLVRSTRFEAYQTVAEQTRAIFRDYDPRFRAGSLDEAYLDLTAYVHAAVGDQGGEPPTPEEKPGTPLFAPVTALSSGFRGVEDNEGEGGAAWGAMGVDEEEEEVRERAIQEREASYWGVAERVVEEIRRRIHGVTGVTASAGIATSFCLAKMASNENKPNGQFRVGDVASFLRDAPVRKVSGIGRITERCLVAGLDVQTCFQLWAKRALLYHVYTPQTARWLLCKSVGLDG---GGLVDPEEGPGGQRTGRKGISRERTFAALSRKEDLLEKLRLICDSLAADMAREGLKAKNLTLKLKSSDFAVTTRAKNCAFYVSTSQELYQHALSLLLPQLPVTLRLMGVRASHFQPKPQAPPKGQGCLEAYVAT-GLEAAMAERPPSGSAKRVASPSSLGRPPRLGESGSFSTGPPLLVVDADLLSPAGGGKEATRATVTKQVPVYTCPLCNQRLSVVLSELNRHVDSCLRESDPYF 750
BLAST of NO02G02240 vs. NCBI_GenBank
Match: CCA14130.1 (DNA polymerase kappa putative [Albugo laibachii Nc14]) HSP 1 Score: 287.0 bits (733), Expect = 1.900e-73 Identity = 206/610 (33.77%), Postives = 313/610 (51.31%), Query Frame = 0
Query: 136 PTDPATGNTSDT-----RHFYTFLNDKAGMDENKRSKEEVEKIVHEASKNSKFFLAQQRNDVKIQERIRGIKSKLRTLSEPLRRALESEADKRLIAAEKSRRSYTQVCVVIDLDAFFTSVEERDEPSLKAVPFAVGG-GVICTANYEARKYGVRSAMPEFIARKLCPQLLVRQTRFETYSHVAEQTRMIFKEYDPHFRAGSLDEAYLDLTACVQGLVRERGGEVPFGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYWSVAEAVVAEIRRRICEVTGVTASAGIATSFCLAKIASNERKPDGQYRVGN----VGGFLRHLPVRKVSGIGRITERCLVAGLEIGTCWELWSKRALLYHVYTHQTAHWLVCKSVGLDGXXXXXXXXXXXXXXXXXXXXXGISRERTFAALSRKDDLLEKLRMICDSLAADMAREGLKAKSITLKLKNSDFAITTRAKSCAFYVSTSQELYQHSLSLLLPQLPITLRLMGVRASHFQPKPQAPPKGQGCLEGYVVTSGPNTAVAAGAASGEAAAGDLSPFVSSSSYSSPSSLPAASQSEAPIVPPAYSCPVCSRCL-SVGLHDFNQHVDDCL 735
P D +T+D + F +KAGM + + E + K V+E SK+S FF +N+ K+ +RI+ ++ ++ L++P R LE+ D+ + + RR T++ VVID+D F+ +VE RD P L+ VP AVG G+I T NYEARK+GVRSAMP FI +KLCP L+ R E YS +A++ R IF YDP+F A SLDEA LDLT + R+ ++ +A A+V+EIR+RI E T +TASAGIA + LAKI SN KP+GQ+ + + F+R LPVRKV GIG++ E+ ++A L I T E++ +RA+L+HV+ +TA WL+ +G+ SRE TF A+S + L + IC+ LA D+A + + A++ITLKLK +DF++ TR+ + + + + L Q +L LL ++PI+LRL+G+RA+ P Q Q ++ +T GA + D S+ S+ S+ ++ AP CP+C + + L N+H+D C+
Sbjct: 39 PPDKKKKDTNDKEQKLGNELFVFTAEKAGMAD--VNAEHLRKTVYEMSKDSVFFKNSMKNNDKVDQRIKQMQEQVAKLTQPKIRFLEARIDEIVALQLECRRDLTRIKVVIDMDMFYAAVEMRDNPILRHVPLAVGSIGMISTTNYEARKFGVRSAMPGFIGKKLCPDLVFTPVRMEKYSAIAQEIRQIFAVYDPNFTAFSLDEAALDLTDYTREHWRKYVSQLSL-------------------------KDWNHDGWMQDCETRQEGGHEMPESLTMKIASAIVSEIRQRIFEETQLTASAGIAVNTMLAKICSNIEKPNGQFALEGSKEVILEFIRELPVRKVGGIGKVMEK-ILAALNITTMQEVFDRRAVLFHVFKERTATWLLRTCLGIQ-------------EQQSESERKSYSRETTFKAVSDFESLKQICASICEHLAQDLAEDNVAARNITLKLKCADFSVRTRSVTLNTSIQSCKRLLQVALDLLKREMPISLRLLGIRAASLIPSVQREETNQ--VQKRQLTIQDCKMTTEGALD---SMKDFGAQEEESALSNDSNKNVDKEAYAP-------CPICQEMIKTASLIAVNRHIDKCI 595
BLAST of NO02G02240 vs. NCBI_GenBank
Match: CCI48937.1 (unnamed protein product [Albugo candida] >CCI48944.1 unnamed protein product [Albugo candida]) HSP 1 Score: 283.9 bits (725), Expect = 1.600e-72 Identity = 200/591 (33.84%), Postives = 301/591 (50.93%), Query Frame = 0
Query: 151 YTFLNDKAGMDENKRSKEEVEKIVHEASKNSKFFLAQQRNDVKIQERIRGIKSKLRTLSEPLRRALESEADKRLIAAEKSRRSYTQVCVVIDLDAFFTSVEERDEPSLKAVPFAVGG-GVICTANYEARKYGVRSAMPEFIARKLCPQLLVRQTRFETYSHVAEQTRMIFKEYDPHFRAGSLDEAYLDLTACVQGLVRERGGEVPFGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYWSVAEAVVAEIRRRICEVTGVTASAGIATSFCLAKIASNERKPDGQYRVGN----VGGFLRHLPVRKVSGIGRITERCLVAGLEIGTCWELWSKRALLYHVYTHQTAHWLVCKSVGLDGXXXXXXXXXXXXXXXXXXXXXGISRERTFAALSRKDDLLEKLRMICDSLAADMAREGLKAKSITLKLKNSDFAITTRAKSCAFYVSTSQELYQHSLSLLLPQLPITLRLMGVRASHFQPKPQAPPKGQGCLEGYVVTSGPNTAVAAGAASGEAAAGDLSPFVSSSSYSSPSSLPAASQSEAPIVPPAYS-CPVCSRCLSV-GLHDFNQHVDDCL 735
+ F KAGM + + E + K V+E SK+S FF +N+ K+ RI+ ++ ++ L+ R LE+ D+ + + RR T++ VVID+D F+ +VE RD P L+ VP AVG G+I T NYEARK+GVRSAMP FI +KLCP L+ R E YS +A++ R IF YDP+F A SLDEA LDLT ++ +A A+V+EIR+RI + T +TASAGIA + LAKI SN KP+GQ + V F+R LPVRKV GIG++ E+ ++A L + T E++ +RA+L+HV+ +TA WL+ S+G+ SRE TF A+S D L + IC+ LA D+A + + A++ITLKLK +DF++ TR+ + + + + L Q +L LL ++PI+LRL+GVRA+ P Q Q + T DL P + S++ ++ ++ + AY+ CP+C++ + L N+H+D+C+
Sbjct: 50 FVFTASKAGMGD--VNAEHLRKTVYEMSKDSDFFKNSLKNNDKVDHRIKQMQEQVAKLTHTKMRFLEARIDEIVALQLEPRRDLTRIKVVIDMDMFYAAVEMRDNPKLRHVPLAVGSIGMISTTNYEARKFGVRSAMPGFIGKKLCPDLVFTPVRMEKYSVIAQEIRQIFAVYDPNFTAFSLDEAALDLTDYIR-------------------------KHWKRYVSQFSAKDWDPDSWILDSDSIDEGSNKIPEPLTMKIASAIVSEIRQRIYDETQLTASAGIAVNTMLAKICSNINKPNGQSALEGTKQAVLKFIRELPVRKVGGIGKVMEK-ILAALNMTTMQEVFDRRAILFHVFKERTAIWLLSTSLGIQ-------------EHQGESERKSYSRETTFRAVSDFDKLKQICATICEHLAQDLAEDKMAARNITLKLKCADFSVRTRSVTLITSIQSCKRLLQVALDLLKREMPISLRLLGVRAASLIPADQQEETNQMQKRQLTIQDCKGT-----------IERDLDPIKEFDAEREVSAI--SNDTKESLYNEAYAPCPICTQIIKTSNLIAVNRHIDECI 586
BLAST of NO02G02240 vs. NCBI_GenBank
Match: XP_006303846.1 (DNA polymerase kappa isoform X2 [Capsella rubella] >EOA36744.1 hypothetical protein CARUB_v10012571mg [Capsella rubella]) HSP 1 Score: 283.1 bits (723), Expect = 2.700e-72 Identity = 186/529 (35.16%), Postives = 277/529 (52.36%), Query Frame = 0
Query: 140 ATGNTSDTRHFY--TFLNDKAGMDENKRSKEEVEKIVHEASKNSKFFLAQQRNDVKIQERIRGIKSKLRTLSEPLRRALESEADKRLIAAEKSRRSYTQVCVVIDLDAFFTSVEERDEPSLKAVPFAVGG-GVICTANYEARKYGVRSAMPEFIARKLCPQLLVRQTRFETYSHVAEQTRMIFKEYDPHFRAGSLDEAYLDLTACVQGLVRER---GGEVPFGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYWSVAEAVVAEIRRRICEVTGVTASAGIATSFCLAKIASNERKPDGQYRVGN----VGGFLRHLPVRKVSGIGRITERCLVAGLEIGTCWELWSKRALLYHVYTHQTAHWLVCKSVGLDGXXXXXXXXXXXXXXXXXXXXXGISRERTFAALSRKDDLLEKLRMICDSLAADMAREGLKAKSITLKLKNSDFAITTRAKSCAFYVSTSQELYQHSLSLLLPQLPITLRLMGVRASHFQPKPQAPPKGQGCLEGYVV 659
+T N+S Y F N KAGM+ KE+V++IV+E SK SK+F ++R D ++++I ++ + LS + + D+R++ E S R +++ + +D+DAF+ +VE +PSLK P AVGG +I TANYEARK+GVR+AMP FIARKLCP L+ F Y+H ++ TR +F YDPHF AGSLDEAYLD+T + RER GGE + E+R + TG+T SAG+A + LAK+ S+ KP+GQ+ + N V F+ LPVRK+ GIG++TE L L I TC E+ K +LLY +++ +A + + +GL G IS ERTF+A + L KL I + L+ DM +EGL A+++TLKLK + F I +RA S Y +S ++ +H+ LL +LP+++RL+G+R S F + + QG + ++V
Sbjct: 8 STNNSSRPWESYNTVFTNAKAGME--GVDKEKVQRIVYEMSKGSKYFQNEERKDALMKQKIEHMRDRCAKLSSSVLSTYQKVVDRRILELEAS-RDLSRIWLHVDMDAFYAAVETLSDPSLKGKPMAVGGLSMISTANYEARKFGVRAAMPGFIARKLCPDLIFVPVDFTKYTHYSDLTRKVFGSYDPHFIAGSLDEAYLDITE----VCRERGLSGGE-------------------------------------------------------------IAEELRSSVYSETGLTCSAGVAANRLLAKVCSDINKPNGQFVLQNDRSTVMTFISSLPVRKIGGIGKVTEHILNDALGIKTCEEMVQKGSLLYALFSQSSADFFLSVGLGLGG-----------TDTPQVRSRKSISSERTFSATGDERLLYSKLAEIAEMLSQDMKKEGLTARTLTLKLKTASFEIRSRAVSLQRYTCSSDDILKHATKLLKAELPVSVRLIGLRMSQFMEEVRNSDPSQGTITKFIV 457
BLAST of NO02G02240 vs. NCBI_GenBank
Match: XP_023632986.1 (DNA polymerase kappa isoform X1 [Capsella rubella]) HSP 1 Score: 283.1 bits (723), Expect = 2.700e-72 Identity = 186/529 (35.16%), Postives = 277/529 (52.36%), Query Frame = 0
Query: 140 ATGNTSDTRHFY--TFLNDKAGMDENKRSKEEVEKIVHEASKNSKFFLAQQRNDVKIQERIRGIKSKLRTLSEPLRRALESEADKRLIAAEKSRRSYTQVCVVIDLDAFFTSVEERDEPSLKAVPFAVGG-GVICTANYEARKYGVRSAMPEFIARKLCPQLLVRQTRFETYSHVAEQTRMIFKEYDPHFRAGSLDEAYLDLTACVQGLVRER---GGEVPFGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYWSVAEAVVAEIRRRICEVTGVTASAGIATSFCLAKIASNERKPDGQYRVGN----VGGFLRHLPVRKVSGIGRITERCLVAGLEIGTCWELWSKRALLYHVYTHQTAHWLVCKSVGLDGXXXXXXXXXXXXXXXXXXXXXGISRERTFAALSRKDDLLEKLRMICDSLAADMAREGLKAKSITLKLKNSDFAITTRAKSCAFYVSTSQELYQHSLSLLLPQLPITLRLMGVRASHFQPKPQAPPKGQGCLEGYVV 659
+T N+S Y F N KAGM+ KE+V++IV+E SK SK+F ++R D ++++I ++ + LS + + D+R++ E S R +++ + +D+DAF+ +VE +PSLK P AVGG +I TANYEARK+GVR+AMP FIARKLCP L+ F Y+H ++ TR +F YDPHF AGSLDEAYLD+T + RER GGE + E+R + TG+T SAG+A + LAK+ S+ KP+GQ+ + N V F+ LPVRK+ GIG++TE L L I TC E+ K +LLY +++ +A + + +GL G IS ERTF+A + L KL I + L+ DM +EGL A+++TLKLK + F I +RA S Y +S ++ +H+ LL +LP+++RL+G+R S F + + QG + ++V
Sbjct: 8 STNNSSRPWESYNTVFTNAKAGME--GVDKEKVQRIVYEMSKGSKYFQNEERKDALMKQKIEHMRDRCAKLSSSVLSTYQKVVDRRILELEAS-RDLSRIWLHVDMDAFYAAVETLSDPSLKGKPMAVGGLSMISTANYEARKFGVRAAMPGFIARKLCPDLIFVPVDFTKYTHYSDLTRKVFGSYDPHFIAGSLDEAYLDITE----VCRERGLSGGE-------------------------------------------------------------IAEELRSSVYSETGLTCSAGVAANRLLAKVCSDINKPNGQFVLQNDRSTVMTFISSLPVRKIGGIGKVTEHILNDALGIKTCEEMVQKGSLLYALFSQSSADFFLSVGLGLGG-----------TDTPQVRSRKSISSERTFSATGDERLLYSKLAEIAEMLSQDMKKEGLTARTLTLKLKTASFEIRSRAVSLQRYTCSSDDILKHATKLLKAELPVSVRLIGLRMSQFMEEVRNSDPSQGTITKFIV 457
BLAST of NO02G02240 vs. NCBI_GenBank
Match: XP_006422820.1 (DNA polymerase kappa [Citrus clementina] >ESR36060.1 hypothetical protein CICLE_v10027948mg [Citrus clementina]) HSP 1 Score: 280.4 bits (716), Expect = 1.800e-71 Identity = 179/500 (35.80%), Postives = 271/500 (54.20%), Query Frame = 0
Query: 153 FLNDKAGMDENKRSKEEVEKIVHEASKNSKFFLAQQRNDVKIQERIRGIKSKLRTLSEPLRRALESEADKRLIAAEKSRRSYTQVCVVIDLDAFFTSVEERDEPSLKAVPFAVGG-GVICTANYEARKYGVRSAMPEFIARKLCPQLLVRQTRFETYSHVAEQTRMIFKEYDPHFRAGSLDEAYLDLTACVQGLVRERGGEVPFGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYWSVAEAVVAEIRRRICEVTGVTASAGIATSFCLAKIASNERKPDGQYRVGN----VGGFLRHLPVRKVSGIGRITERCLVAGLEIGTCWELWSKRALLYHVYTHQTAHWLVCKSVGLDGXXXXXXXXXXXXXXXXXXXXXGISRERTFAALSRKDDLLEKLRMICDSLAADMAREGLKAKSITLKLKNSDFAITTRAKSCAFYVSTSQELYQHSLSLLLPQLPITLRLMGVRASHF-QPKPQAP 647
+ N KAGMD KE+V+K+V+E SK SK+F ++R + IQ++I ++++ L+ P+ + ADKR++ E + R ++ + +D+DAF+ +VE PSLK P AVG +ICTANYEAR++GVR+AMP FIARKLCP+L+ T F Y++ ++ TR +F +YDP+F A SLDEAYLD+T + RERG + E+R + E G+T SAG+A + LAK+ S+ KP+GQ+ + N V F+ LP+RK+ GIG++TE L I TC E+ K +LL V++H TA + + +GL IS ERTF+A K L KL I + L+ADM +EGL+ +++TLKLK + F + TRA + Y+S+S+++ +H+ LL +LP++LRL+G+R + F + K +AP
Sbjct: 25 YTNAKAGMD--GVDKEKVQKVVYEMSKGSKYFENEERKEAFIQQKIEHMRARCAKLTSPVISHYQKVADKRILELE-ATRDLSRSWLHVDMDAFYAAVETLSNPSLKGKPMAVGTMSMICTANYEARRFGVRAAMPGFIARKLCPELIFVPTDFTKYTYYSDLTRKVFHKYDPNFMAASLDEAYLDITE----VCRERG----------------------------------------------------------ISGIEIAEELRTSVYEEAGLTCSAGVAPNRLLAKVCSDINKPNGQFVLPNDRMAVMTFISSLPIRKIGGIGKVTEHILRDVFGINTCEEMLQKGSLLCAVFSHSTADFFLSVGLGLGS-----------TNTPQARFRKSISSERTFSATEDKALLYRKLAEIAEMLSADMQKEGLRGRTLTLKLKTASFEVRTRAVTLQKYISSSEDILKHASVLLKAELPVSLRLIGLRVTQFNEDKVRAP 448
BLAST of NO02G02240 vs. NCBI_GenBank
Match: XP_016691604.1 (PREDICTED: DNA polymerase kappa isoform X1 [Gossypium hirsutum]) HSP 1 Score: 280.4 bits (716), Expect = 1.800e-71 Identity = 177/493 (35.90%), Postives = 267/493 (54.16%), Query Frame = 0
Query: 153 FLNDKAGMDENKRSKEEVEKIVHEASKNSKFFLAQQRNDVKIQERIRGIKSKLRTLSEPLRRALESEADKRLIAAEKSRRSYTQVCVVIDLDAFFTSVEERDEPSLKAVPFAVGG-GVICTANYEARKYGVRSAMPEFIARKLCPQLLVRQTRFETYSHVAEQTRMIFKEYDPHFRAGSLDEAYLDLTACVQGLVRERGGEVPFGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYWSVAEAVVA-EIRRRICEVTGVTASAGIATSFCLAKIASNERKPDGQYRVGN----VGGFLRHLPVRKVSGIGRITERCLVAGLEIGTCWELWSKRALLYHVYTHQTAHWLVCKSVGLDGXXXXXXXXXXXXXXXXXXXXXGISRERTFAALSRKDDLLEKLRMICDSLAADMAREGLKAKSITLKLKNSDFAITTRAKSCAFYVSTSQELYQHSLSLLLPQLPITLRLMGVRASHF 640
+ N KAGMD KE+V+++V+E SK SK+F ++R + I+++I ++++ LS + ADKR++ E S R +++ + +D+DAF+ +VE PSLK P AVG +I TANYEARK+GVR+AMP FIARKLCP L+ T F+ Y++ ++ TR +F +YDP+F A SLDEAYLD+T +G S+ A +A E+R R+ E TG+T SAG+A + LAK+ S+ KP+GQ+ + N V F+ LP+RK+ GIG++TE L I TC E+ K + L +++H +A + + +GL G IS ERTF+A L +KL I + L+ADM +EGL +++TLKLK + F + TRA + Y+S+S ++ +H+ +LL +LPI+LRL+G+R SHF
Sbjct: 21 YTNAKAGMD--GVDKEKVQRVVYEMSKGSKYFENEERKEAFIRQKIEHMRARAAKLSAADLSHYQKVADKRILELE-STRDLSRIWLHVDMDAFYAAVETLSNPSLKGKPMAVGSMSMISTANYEARKFGVRAAMPGFIARKLCPDLIFVPTDFKKYTYYSDSTRKVFWDYDPNFMAASLDEAYLDITKVCEGR---------------------------------------------------------------SITGAEIAEELRSRVHEETGLTCSAGVAPNRLLAKVCSDINKPNGQFVLPNDHMAVMTFISSLPIRKIGGIGKVTENILKGVFGISTCEEMLQKGSFLCALFSHSSADFFLSVGLGLGG-----------TDTPEARFRKSISSERTFSATEDAALLYQKLADIAEMLSADMQKEGLSGRTLTLKLKTASFEVRTRAVTLQKYISSSDDILKHASNLLKAELPISLRLIGLRVSHF 436
BLAST of NO02G02240 vs. NCBI_GenBank
Match: EFH67806.1 (predicted protein [Arabidopsis lyrata subsp. lyrata]) HSP 1 Score: 279.3 bits (713), Expect = 3.900e-71 Identity = 187/529 (35.35%), Postives = 275/529 (51.98%), Query Frame = 0
Query: 140 ATGNTSDTRHFYT--FLNDKAGMDENKRSKEEVEKIVHEASKNSKFFLAQQRNDVKIQERIRGIKSKLRTLSEPLRRALESEADKRLIAAEKSRRSYTQVCVVIDLDAFFTSVEERDEPSLKAVPFAVGG-GVICTANYEARKYGVRSAMPEFIARKLCPQLLVRQTRFETYSHVAEQTRMIFKEYDPHFRAGSLDEAYLDLTACVQGLVRER---GGEVPFGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYWSVAEAVVAEIRRRICEVTGVTASAGIATSFCLAKIASNERKPDGQYRVGN----VGGFLRHLPVRKVSGIGRITERCLVAGLEIGTCWELWSKRALLYHVYTHQTAHWLVCKSVGLDGXXXXXXXXXXXXXXXXXXXXXGISRERTFAALSRKDDLLEKLRMICDSLAADMAREGLKAKSITLKLKNSDFAITTRAKSCAFYVSTSQELYQHSLSLLLPQLPITLRLMGVRASHFQPKPQAPPKGQGCLEGYVV 659
+T N+S Y F N KAGM+ KE+V++IV+E SK SKFF ++R + ++++I ++ + LS DKR++ E + R +++ + +D+DAF+ +VE +PSLK P AVGG +I TANYEARK+GVR+AMP FIARKLCP L+ F Y+H ++ TR +F+ YDPHF AGSLDEAYLD+T + RER GGE + E+R + TG+T SAG+A + LAK+ S+ KP+GQ+ + N V F+ LPVRK+ GIG++TE L L I TC E+ K LLY +++ +A + + +GL G IS ERTFAA + L KL I + L+ DM +EGL A+++TLKLK + F I +RA S Y +S ++ +H+ LL +LP+++RL+G+R S F + + QG + ++V
Sbjct: 8 STNNSSRPWESYNTFFTNAKAGME--GVDKEKVQRIVYEMSKGSKFFQNEERKEALMKQKIEHMRDRCAKLSSSDLSNYHKVVDKRILELE-ATRDLSRIWLHVDMDAFYAAVETLSDPSLKGKPMAVGGLSMISTANYEARKFGVRAAMPGFIARKLCPDLIFVPVDFTKYTHYSDLTRKVFRNYDPHFIAGSLDEAYLDITE----VCRERGLSGGE-------------------------------------------------------------IAEELRSSVYSETGLTCSAGVAANRLLAKVCSDINKPNGQFVLQNDRSTVMTFVSSLPVRKIGGIGKVTEHILKDALGIKTCEEMVQKGPLLYALFSQSSADFFLSVGLGLGG-----------TDTPQVRSRKSISSERTFAATGDERLLYSKLAEIAEMLSHDMKKEGLTARTLTLKLKTASFEIRSRAVSLQRYTCSSDDILKHATKLLKAELPVSVRLIGLRMSQFVGEIRNSDPSQGTITKFIV 457
BLAST of NO02G02240 vs. NCBI_GenBank
Match: XP_020866704.1 (LOW QUALITY PROTEIN: DNA polymerase kappa [Arabidopsis lyrata subsp. lyrata]) HSP 1 Score: 279.3 bits (713), Expect = 3.900e-71 Identity = 187/529 (35.35%), Postives = 275/529 (51.98%), Query Frame = 0
Query: 140 ATGNTSDTRHFYT--FLNDKAGMDENKRSKEEVEKIVHEASKNSKFFLAQQRNDVKIQERIRGIKSKLRTLSEPLRRALESEADKRLIAAEKSRRSYTQVCVVIDLDAFFTSVEERDEPSLKAVPFAVGG-GVICTANYEARKYGVRSAMPEFIARKLCPQLLVRQTRFETYSHVAEQTRMIFKEYDPHFRAGSLDEAYLDLTACVQGLVRER---GGEVPFGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYWSVAEAVVAEIRRRICEVTGVTASAGIATSFCLAKIASNERKPDGQYRVGN----VGGFLRHLPVRKVSGIGRITERCLVAGLEIGTCWELWSKRALLYHVYTHQTAHWLVCKSVGLDGXXXXXXXXXXXXXXXXXXXXXGISRERTFAALSRKDDLLEKLRMICDSLAADMAREGLKAKSITLKLKNSDFAITTRAKSCAFYVSTSQELYQHSLSLLLPQLPITLRLMGVRASHFQPKPQAPPKGQGCLEGYVV 659
+T N+S Y F N KAGM+ KE+V++IV+E SK SKFF ++R + ++++I ++ + LS DKR++ E + R +++ + +D+DAF+ +VE +PSLK P AVGG +I TANYEARK+GVR+AMP FIARKLCP L+ F Y+H ++ TR +F+ YDPHF AGSLDEAYLD+T + RER GGE + E+R + TG+T SAG+A + LAK+ S+ KP+GQ+ + N V F+ LPVRK+ GIG++TE L L I TC E+ K LLY +++ +A + + +GL G IS ERTFAA + L KL I + L+ DM +EGL A+++TLKLK + F I +RA S Y +S ++ +H+ LL +LP+++RL+G+R S F + + QG + ++V
Sbjct: 8 STNNSSRPWESYNTFFTNAKAGME--GVDKEKVQRIVYEMSKGSKFFQNEERKEALMKQKIEHMRDRCAKLSSSDLSNYHKVVDKRILELE-ATRDLSRIWLHVDMDAFYAAVETLSDPSLKGKPMAVGGLSMISTANYEARKFGVRAAMPGFIARKLCPDLIFVPVDFTKYTHYSDLTRKVFRNYDPHFIAGSLDEAYLDITE----VCRERGLSGGE-------------------------------------------------------------IAEELRSSVYSETGLTCSAGVAANRLLAKVCSDINKPNGQFVLQNDRSTVMTFVSSLPVRKIGGIGKVTEHILKDALGIKTCEEMVQKGPLLYALFSQSSADFFLSVGLGLGG-----------TDTPQVRSRKSISSERTFAATGDERLLYSKLAEIAEMLSHDMKKEGLTARTLTLKLKTASFEIRSRAVSLQRYTCSSDDILKHATKLLKAELPVSVRLIGLRMSQFVGEIRNSDPSQGTITKFIV 457
BLAST of NO02G02240 vs. NCBI_GenBank
Match: KDO57896.1 (hypothetical protein CISIN_1g005785mg [Citrus sinensis]) HSP 1 Score: 278.1 bits (710), Expect = 8.800e-71 Identity = 178/500 (35.60%), Postives = 270/500 (54.00%), Query Frame = 0
Query: 153 FLNDKAGMDENKRSKEEVEKIVHEASKNSKFFLAQQRNDVKIQERIRGIKSKLRTLSEPLRRALESEADKRLIAAEKSRRSYTQVCVVIDLDAFFTSVEERDEPSLKAVPFAVGG-GVICTANYEARKYGVRSAMPEFIARKLCPQLLVRQTRFETYSHVAEQTRMIFKEYDPHFRAGSLDEAYLDLTACVQGLVRERGGEVPFGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYWSVAEAVVAEIRRRICEVTGVTASAGIATSFCLAKIASNERKPDGQYRVGN----VGGFLRHLPVRKVSGIGRITERCLVAGLEIGTCWELWSKRALLYHVYTHQTAHWLVCKSVGLDGXXXXXXXXXXXXXXXXXXXXXGISRERTFAALSRKDDLLEKLRMICDSLAADMAREGLKAKSITLKLKNSDFAITTRAKSCAFYVSTSQELYQHSLSLLLPQLPITLRLMGVRASHF-QPKPQAP 647
+ N KAGMD KE+V+K+V+E SK SK+F ++R + IQ++I ++++ L+ P+ + ADKR++ E + R ++ + +D+DAF+ +VE PSLK P AVG +ICTANYEAR++GVR+AMP FIARKLCP+L+ T F Y++ ++ TR +F +YDP+F A SLDEAYLD+T + RERG + E+R + E G+T SAG+A + LAK+ S+ KP+GQ+ + N V F+ LP+RK+ GIG++TE L I TC E+ K +LL V++H TA + + +GL IS ERTF+ K L KL I + L+ADM +EGL+ +++TLKLK + F + TRA + Y+S+S+++ +H+ LL +LP++LRL+G+R + F + K +AP
Sbjct: 25 YTNAKAGMD--GVDKEKVQKVVYEMSKGSKYFENEERKEAFIQQKIEHMRARCAKLTSPVISHYQKVADKRILELE-ATRDLSRSWLHVDMDAFYAAVETLSNPSLKGKPMAVGTMSMICTANYEARRFGVRAAMPGFIARKLCPELIFVPTDFTKYTYYSDLTRKVFCKYDPNFMAASLDEAYLDITE----VCRERG----------------------------------------------------------ISGIEIAEELRTSVYEEAGLTCSAGVAPNRLLAKVCSDINKPNGQFVLPNDRMAVMTFISSLPIRKIGGIGKVTEHILRDVFGINTCEEMLQKGSLLCAVFSHSTADFFLSVGLGLGS-----------TNTPQARFRKSISSERTFSVTEDKALLYRKLAEIAEMLSADMQKEGLRGRTLTLKLKTASFEVRTRAVTLQKYISSSEDILKHASVLLKAELPVSLRLIGLRVTQFNEDKVRAP 448 The following BLAST results are available for this feature:
BLAST of NO02G02240 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO02G02240 ID=NO02G02240|Name=NO02G02240|organism=Nannochloropsis oceanica|type=gene|length=2448bpback to top protein sequence of NO02G02240.1 >NO02G02240.1-protein ID=NO02G02240.1-protein|Name=NO02G02240.1|organism=Nannochloropsis oceanica|type=polypeptide|length=816bpback to top Synonyms
Publications
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