NO02G02150, NO02G02150 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO02G02150 vs. NCBI_GenBank
Match: EWM30512.1 (mitochondrial import inner membrane translocase subunit tim16 [Nannochloropsis gaditana]) HSP 1 Score: 223.0 bits (567), Expect = 5.800e-55 Identity = 117/137 (85.40%), Postives = 128/137 (93.43%), Query Frame = 0 Query: 1 MSGPFVRMLVNIAVMSASVFSRAFVAAYHQALQNAKQGGGTAAKAASRTYGGMAPDEALKVLNLQKTDMKNPARLIEQFDKYFMQNEPGKGGSFYLQSKVYRAKECLEKAIEEERGKAAKAKAEADDARKANKSKVG 138 MSGPFVRMLVNIAVMSASVFSRAFVAAYHQALQNAKQGGGTAAKAASRTYGGMAPDEALKVLNLQKTD+K+ AR+IEQFDKYF QNEPGKGGSFYLQSKVYRAKECLE+AI+ E+ KA KA++EA++AR+ N K G Sbjct: 1 MSGPFVRMLVNIAVMSASVFSRAFVAAYHQALQNAKQGGGTAAKAASRTYGGMAPDEALKVLNLQKTDLKSSARIIEQFDKYFSQNEPGKGGSFYLQSKVYRAKECLERAIKAEKAKAGKARSEAEEARRENAQKRG 137
BLAST of NO02G02150 vs. NCBI_GenBank
Match: CBJ31171.1 (Mitochondrial import inner membrane translocase subunit TIM16 homolog [Ectocarpus siliculosus]) HSP 1 Score: 102.1 bits (253), Expect = 1.500e-18 Identity = 57/111 (51.35%), Postives = 82/111 (73.87%), Query Frame = 0 Query: 1 MSGPFVRMLVNIAVMSASVFSRAFVAAYHQALQNAKQGGGTAAKAASRTYGGMAPDEALKVLNLQKTDMKNPARLIEQFDKYFMQNEPGKGGSFYLQSKVYRAKECLEKAI 112 M+ PF R++ +AV SA + SRAFV+AY QA+ NA+ G +AKA SRT ++ EA+++LNLQK +MK P + +++D+YF N+P KGGSFYLQSKV+RAKE L++ + Sbjct: 1 MANPFARIIAQLAVASAGIVSRAFVSAYSQAVHNARTGTLESAKAMSRT-SKLSTLEAMQILNLQKGEMK-PDLIKQRYDQYFGINDPDKGGSFYLQSKVFRAKEALDEQL 109
BLAST of NO02G02150 vs. NCBI_GenBank
Match: GAY02765.1 (Hypothetical protein PINS_010601 [Pythium insidiosum]) HSP 1 Score: 96.7 bits (239), Expect = 6.300e-17 Identity = 56/119 (47.06%), Postives = 73/119 (61.34%), Query Frame = 0 Query: 1 MSGPFVRMLVNIAVMSASVFSRAFVAAYHQALQNAKQGGGTA--AKAASRTYGGMAPDEALKVLNLQKTDMKNPARLIEQFDKYFMQNEPGKGGSFYLQSKVYRAKECLEKAIEEERGK 118 MSGP R++ + VM A + SRAFV AY QA+ NAK G A AK A + M +AL++LN + + +QF +YF N+P KGGSFYLQSK++RAKE LE+ EEE K Sbjct: 1 MSGPLGRVIAQVIVMGAGIVSRAFVQAYQQAVHNAKTGNTAAMTAKTAIKRKNVMPRTQALEILNFPTSATPTTEXVQKQFQRYFEANDPAKGGSFYLQSKIFRAKEALERKDEEEPAK 119
BLAST of NO02G02150 vs. NCBI_GenBank
Match: GBG25289.1 (Mitochondrial import inner membrane translocase subunit tim16 [Aurantiochytrium sp. FCC1311]) HSP 1 Score: 96.3 bits (238), Expect = 8.200e-17 Identity = 62/130 (47.69%), Postives = 73/130 (56.15%), Query Frame = 0 Query: 1 MSGPFVRMLVNIAVMSASVFSRAFVAAYHQALQNAKQGGGTAAKAASRTYGGMAPDEALKVLNLQKTDMKNPARLIEQFDKYFMQNEPGKGGSFYLQSKVYRAKECLEKAIEEERGKAAKAKAEADDARK 131 MSGP VR+ V + V V SRAFV AY QA N AA A M DEALKVLN T KN + E++++YF N+P KGGSFYLQSK +RAKE +EK + EE A AE D K Sbjct: 1 MSGPIVRLFVQVFVAGVGVVSRAFVQAYQQAAANPNAAKAAAANAKRSLRKEMKLDEALKVLNFDSTP-KNLPEVTERYEQYFNANDPKKGGSFYLQSKFHRAKEVVEKQLAEEAAAKAGKPAEKSDESK 129
BLAST of NO02G02150 vs. NCBI_GenBank
Match: GAX11740.1 (hypothetical protein FisN_7Lh121 [Fistulifera solaris]) HSP 1 Score: 92.0 bits (227), Expect = 1.500e-15 Identity = 54/115 (46.96%), Postives = 77/115 (66.96%), Query Frame = 0 Query: 3 GPFVRMLVNIAVMSASVFSRAFVAAYHQALQNAKQGGGTAAKAASRTYGGMAPDEALKVLNLQKTDMKNPARLIEQFDKYFMQNE--PGKGGSFYLQSKVYRAKECLEKAIEEER 116 GP R++ + V + +V RA AAY QAL NAK+GG TAA+A +R M+ +EAL++LNL + + + +QF+KY NE G GGSFYLQSKVYRAKE L++ ++E++ Sbjct: 4 GPLARIIAQVIVPAIAVLVRALPAAYAQALGNAKKGGVTAAQAVTRK--AMSKEEALQILNLHQEEKLTAEAIQKQFEKYMSANEVKRGGGGSFYLQSKVYRAKELLDEFVDEKK 116
BLAST of NO02G02150 vs. NCBI_GenBank
Match: GAX20808.1 (hypothetical protein FisN_7Hh121 [Fistulifera solaris]) HSP 1 Score: 90.5 bits (223), Expect = 4.500e-15 Identity = 58/124 (46.77%), Postives = 82/124 (66.13%), Query Frame = 0 Query: 3 GPFVRMLVNIAVMSASVFSRAFVAAYHQALQNAKQGGGTAAKAASRTYGGMAPDEALKVLNLQKTDMKNPARLIEQFDKYFMQNE--PGKGGSFYLQSKVYRAKECLEKAIEEER-GKAAKAKA 124 GP R++ + V + +V RA AAY QAL NAK+GG TAA+A +R M+ +EAL++LNL + + + +QF+KY NE G GGSFYLQSKVYRAKE L++ I+E++ + KAK+ Sbjct: 4 GPLARIIAQVIVPAIAVLVRALPAAYAQALGNAKKGGVTAAQAVTRK--AMSKEEALQILNLHQEEKLTAEAIQKQFEKYMSANEVKRGGGGSFYLQSKVYRAKELLDEFIDEKKEEQQTKAKS 125
BLAST of NO02G02150 vs. NCBI_GenBank
Match: XP_008864536.1 (hypothetical protein H310_02717 [Aphanomyces invadans] >ETW06461.1 hypothetical protein H310_02717 [Aphanomyces invadans]) HSP 1 Score: 88.2 bits (217), Expect = 2.200e-14 Identity = 56/111 (50.45%), Postives = 71/111 (63.96%), Query Frame = 0 Query: 1 MSGPFVRMLVNIAVMSASVFSRAFVAAYHQALQNAKQGGGTAAKAASRTYGGMAPDEALKVLNLQKTDMKNPARLIEQFDKYFMQNEPGK--GGSFYLQSKVYRAKECLEK 110 MSG R++ NI V A V S+AFV AY QA+ NAK G T A M+ ++AL+VLNLQ + + A + +QFD+YF NEP K GGS+YLQSK+YRAKE L K Sbjct: 1 MSGQIARLIANIVVAGAGVVSKAFVQAYQQAVVNAK-NGKTVETATVSLKNKMSKEQALEVLNLQ--GVPSIADIEKQFDRYFKANEPSKDGGGSYYLQSKIYRAKEALLK 108
BLAST of NO02G02150 vs. NCBI_GenBank
Match: XP_024583480.1 (mitochondrial import inner membrane translocase subunit tim16 [Plasmopara halstedii] >CEG47111.1 mitochondrial import inner membrane translocase subunit tim16 [Plasmopara halstedii]) HSP 1 Score: 87.8 bits (216), Expect = 2.900e-14 Identity = 52/114 (45.61%), Postives = 70/114 (61.40%), Query Frame = 0 Query: 1 MSGPFVRMLVNIAVMSASVFSRAFVAAYHQALQNAKQGGGTAAKA-ASRTYGGMAPDEALKVLNLQKTDMKNPARLIE----QFDKYFMQNEPGKGGSFYLQSKVYRAKECLEK 110 MSGP R++ + VM A + S+AFV AY QA+QNA+ G A K A M+ +A ++LN + PA +E QF +YF N+P KGGSFY+QSK+YRAKE LE+ Sbjct: 1 MSGPLGRIIAQVVVMGAGIVSKAFVHAYQQAVQNARSGNAAAMKTKAVVRKNQMSTQQAREILNF---PVSGPAPSLEDVQRQFKRYFEANDPAKGGSFYIQSKIYRAKEALER 111
BLAST of NO02G02150 vs. NCBI_GenBank
Match: POM71382.1 (TIM23 translocase complex subunit Tim16 (predicted) [Phytophthora palmivora var. palmivora]) HSP 1 Score: 87.8 bits (216), Expect = 2.900e-14 Identity = 57/126 (45.24%), Postives = 79/126 (62.70%), Query Frame = 0 Query: 1 MSGPFVRMLVNIAVMSASVFSRAFVAAYHQALQNAKQG--GGTAAKAASRTYGGMAPDEALKVLNLQKTDMKNPARLIE-QFDKYFMQNEPGKGGSFYLQSKVYRAKECLE-KAIEEERGKAAKAK 123 MSGP R++ + VM A + S+AFV AY QA+ NA+ G G AAK R M+ +AL++LN + + + I+ QF +YF N+P KGGSFYLQSK++RAKE LE K +EE + +AK Sbjct: 1 MSGPLGRIIAQVVVMGAGIVSKAFVQAYQQAVHNARSGNAGAMAAKTVVRK-NQMSKQQALEILNFPTSGVAPSSEEIQKQFTRYFEANDPAKGGSFYLQSKIFRAKEALERKDPDEETPSSDQAK 125
BLAST of NO02G02150 vs. NCBI_GenBank
Match: XP_009531597.1 (hypothetical protein PHYSODRAFT_562549 [Phytophthora sojae] >EGZ14168.1 hypothetical protein PHYSODRAFT_562549 [Phytophthora sojae]) HSP 1 Score: 87.0 bits (214), Expect = 5.000e-14 Identity = 54/127 (42.52%), Postives = 77/127 (60.63%), Query Frame = 0 Query: 1 MSGPFVRMLVNIAVMSASVFSRAFVAAYHQALQNAKQG--GGTAAKAASRTYGGMAPDEALKVLNLQKT-DMKNPARLIEQFDKYFMQNEPGKGGSFYLQSKVYRAKECLEKAIEEERGKAAKAKAE 125 MSGP R++ + VM A + S+AFV AY QA+ NA+ G G AAK R M+ +A ++LN + + + + +QF +YF N+P KGGSFYLQSK++RAKE LE+ +E A+ A E Sbjct: 1 MSGPLGRIIAQVVVMGAGIVSKAFVQAYQQAVHNARTGNTGAMAAKTVVRK-NQMSKQQAREILNFPTSGPVPSSEEIQKQFTRYFEANDPAKGGSFYLQSKIFRAKEALERKDPDEEAPASDAAKE 126 The following BLAST results are available for this feature:
BLAST of NO02G02150 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO02G02150 ID=NO02G02150|Name=NO02G02150|organism=Nannochloropsis oceanica|type=gene|length=426bpback to top protein sequence of NO02G02150.1 >NO02G02150.1-protein ID=NO02G02150.1-protein|Name=NO02G02150.1|organism=Nannochloropsis oceanica|type=polypeptide|length=142bpback to top Synonyms
Publications
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