NO02G02050, NO02G02050 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO02G02050 vs. NCBI_GenBank
Match: EWM30437.1 (hypothetical protein Naga_100100g22 [Nannochloropsis gaditana]) HSP 1 Score: 605.5 bits (1560), Expect = 2.400e-169 Identity = 340/465 (73.12%), Postives = 372/465 (80.00%), Query Frame = 0 Query: 339 LVVYRNDGNMMELTPRVFPGSGGEDLSLLLDDYPSRILSMASVARLGSLMLAASGLAYLAVVPRNSPTQHYNYLFKTNLLLVSASLAWPLLLLGLMYNAREININHLIQTFFTAATAGYVGVFLGEIVVATGLKLLAFKKLEPGMHASCPEIPSIHLPWVWKSDCTGYRPRLLTLLVADLMINCLASPVIEEAAKLLCFRWGSWIRPTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQRWRRRPLRSLLSLIFSLLLAPFSAGSGSRRYRRPDSVHSTLVYMTAASLGLKAADNARRILMYTKPEDTSKPFFALARGFFPVHELCGAFTALNLVRQDILGERMSWFRLLAPAVILHSMANFRGMKPVFKWASSSPWTEMQLQALSAPDYATALQQIWKAVXXXXXXXVLARVLGYIMFRHYLLSKQVKIRYANYDF 804 +VVYRN+ M + G G+ LSLLLDDYPSRILS+AS+ARLG L+L A+GLAYLAVVPRN+PT+ YNYLFKTNLLLVSASLAWP LLL LMYNAREIN+N+LI+TFFTAATAGY+G FL EIV ATGLKLLAF +LEP M A+CPEIPSIHLPWVWK+DC YRPRLLTLL+ADL INCLASP+IEEAAKLLC++WG W+R T XXXXXXXXXXXXXXXX R R LAP SAG G RRYRRP+SVHSTLVYMTAA+LGLKAADNARRIL+YT+P+DTSKPFFALARGFFPVHELCGAFTALNLVR+DILGERMSW RLLAPAVILHSMANFRGMKP+FKWASSSPWTEMQLQALSAPDYATALQQIWKAVXXXXXXXVLARVLGYIMFRHYLLSKQV++RYA+Y F Sbjct: 1 MVVYRNEEGMQGMR----RGPVGDALSLLLDDYPSRILSIASLARLGLLVLTATGLAYLAVVPRNAPTEQYNYLFKTNLLLVSASLAWPSLLLCLMYNAREINVNYLIRTFFTAATAGYLGSFLTEIVAATGLKLLAFYRLEPHMQAACPEIPSIHLPWVWKTDCVSYRPRLLTLLIADLAINCLASPIIEEAAKLLCYQWGGWVRAT--------TPLQAQEXXXXXXXXXXXXXXXXAGPSEGANPDSSLSPEAVGAWARQSPPDRPRXXXXXXXXXXXXXXXLAPLSAGPGGRRYRRPESVHSTLVYMTAAALGLKAADNARRILVYTRPQDTSKPFFALARGFFPVHELCGAFTALNLVRRDILGERMSWIRLLAPAVILHSMANFRGMKPIFKWASSSPWTEMQLQALSAPDYATALQQIWKAVXXXXXXXVLARVLGYIMFRHYLLSKQVRLRYADYRF 453
BLAST of NO02G02050 vs. NCBI_GenBank
Match: XP_002295794.1 (predicted protein, partial [Thalassiosira pseudonana CCMP1335] >ACI64511.1 predicted protein, partial [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 220.7 bits (561), Expect = 1.600e-53 Identity = 142/426 (33.33%), Postives = 200/426 (46.95%), Query Frame = 0 Query: 376 LSMASVARLGSLMLAASGLAYLAVVPRNSPTQHYNYLFKTNLLLVSASLAWPLLLLGLMYNAREININHLIQTFFTAATAGYVGVFLGEIVVATGLKLLAFKKLEPGMHASCPEIPSIHLPWVWKSDCTGYRPRLLTLLVADLMINCLASPVIEEAAKLLCFRWGSWIRPTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQRWRRRPLRSLLSLIFSLLLAPFSAGSGSRRYRRPDSVHSTLVYMTAASLGLKAADNARRILMYTKPEDTSKPFFALARGFFPVHELCGAFTALNLVRQDILGERMSWFRLLAPAVILHSMANFRGMKPVFKWASSSPWTEMQLQALSAPDYATALQQIWKAVXXXXXXXVLARVLGYIMFRHYLLSKQVKIRYANY 802 +S S+ ++ + + L+Y AV PR P YN LF L V S PL +L +Y+ + NIN +I TF + I+V T L+L F EP + + P++PSI LPWV + YRP+ +TL AD +C+ASP+IEE KL +W + + Q+ ++R +S L I R +++ + M AASLGLK D+ RRILMYTK D+ K F+A+ RG FP+HELCG TAL L R+DILG M ++++ PAV +H MANFRGMKP+FKW SS+PW+EMQL T Q + K+ +L RVLG+ + +YL+ +Q R Y Sbjct: 584 ISFDSLQKIAFSTIGVALLSYCAVSPRTLPFPEYNRLFLQTLSTVGLSAIIPLAMLMCVYDGKYNNINTIIGTFHVSXXXXXXXXXXXXIIVTTALRLGVFMIWEPAIFSLTPKVPSIILPWVLRE--KQYRPKRITLFAADFATSCVASPIIEEYLKLKIVQWTASL----------------------------------------------------------PRVQKGKKRKKKSALQPIM-------------REGDEVTNINCYVTQMLAASLGLKLFDSTRRILMYTKKSDSYKHFYAVCRGAFPIHELCGTMTALFLARRDILGVNMPMWKIIGPAVFIHGMANFRGMKPIFKWNSSTPWSEMQLYPWKVGSNFTLKQILSKSYAKLVWFTILCRVLGFCVKNYYLIQRQAMKRMTTY 936
BLAST of NO02G02050 vs. NCBI_GenBank
Match: GAX22113.1 (hypothetical protein FisN_6Hh362 [Fistulifera solaris]) HSP 1 Score: 193.7 bits (491), Expect = 2.100e-45 Identity = 120/359 (33.43%), Postives = 173/359 (48.19%), Query Frame = 0 Query: 376 LSMASVARLGSLMLAASGLAYLAVVPRNSPTQHYNYLFKTNLLLVSASLAWPLLLLGLMYNAREININHLIQTFFTAATAGYVGVFLGEIVVATGLKLLAFKKLEPGMHASCPEIPSIHLPWVWKSDCTGYRPRLLTLLVADLMINCLASPVIEEAAKLLCFRWGSWIRPTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQRWRRRPLRSLLSLIFSLLLAPFSAGSGSRRYRRPDSVHST--LVYMTAASLGLKAADNARRILMYTKPEDTSKPFFALARGFFPVHELCGAFTALNLVRQDILGERMSWFRLLAPAVILHSMANFRGMK 733 L+ S+ ++ L+ A S + AV PRN P Y + N +VS L +P +++ L+Y+ N N +I T FT+ + GY F+ E+V+AT ++L F LE + P IP LPWV + + GY+P+ +TL AD + +C+ASPV+EE KL W + + WRR+ + S + L P RR D V++ + M AASLGLK D+ RRIL+YTKP SK FF+ RG FP+HELCG TAL L ++D+LG M +++L P+V++H MANFRGMK Sbjct: 438 LTGRSIQQITLLIAAGSLACFAAVSPRNLPLDEYRFRILENARVVSLVLIFPAVVMALVYDGAMNNRNDVINTLFTSCSVGYTMAFISEVVLATVIRLAVFSLLEKRIFDLSPRIPLFILPWVLREN--GYKPKRITLFAADFLTSCIASPVVEEFVKLKILLWTATLPRNF----------------------------------------------------------NWRRKTVTDKHSQVTKTELVPEQV---QRRDGEVDIVNANQHVTQMLAASLGLKMCDSIRRILLYTKPHHESKSFFSFCRGVFPIHELCGTITALGLAKRDLLGVAMPLWKILLPSVVVHGMANFRGMK 733
BLAST of NO02G02050 vs. NCBI_GenBank
Match: GAX14582.1 (hypothetical protein FisN_6Lh362 [Fistulifera solaris]) HSP 1 Score: 193.0 bits (489), Expect = 3.700e-45 Identity = 116/359 (32.31%), Postives = 175/359 (48.75%), Query Frame = 0 Query: 376 LSMASVARLGSLMLAASGLAYLAVVPRNSPTQHYNYLFKTNLLLVSASLAWPLLLLGLMYNAREININHLIQTFFTAATAGYVGVFLGEIVVATGLKLLAFKKLEPGMHASCPEIPSIHLPWVWKSDCTGYRPRLLTLLVADLMINCLASPVIEEAAKLLCFRWGSWIRPTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQRWRRRPLRSLLSLIFSLLLAPFSAGSGSRRYRRPDSVHST--LVYMTAASLGLKAADNARRILMYTKPEDTSKPFFALARGFFPVHELCGAFTALNLVRQDILGERMSWFRLLAPAVILHSMANFRGMK 733 L+ S+ ++ L S + AV PRN P Y + N+ +VS +L +P L++ L+Y+ N+N +I T FT+ + GY F+ E+++AT ++L F LE + P IP LPWV + + GYRP+ +TL AD + +C+ASP++EE KL W + + WR++ + S + L P RR D+V++ + M AASLGLK D+ RRIL+YTKP SK FF+ RG FP+HELCG TAL + ++D+LG + +++L P+V++H MANFRGMK Sbjct: 447 LTGRSLQQITLLFAGGSFACFAAVSPRNLPLNEYRFRILENVRIVSLALIFPALVMALVYDGAMNNLNDVINTLFTSCSVGYTMAFISEVMLATVIRLAVFSFLEKRIFDLSPRIPLFILPWVLREN--GYRPKRITLFAADFLTSCIASPLVEEFVKLKILLWTATLPQNF----------------------------------------------------------NWRKKSVTDKNSHVTKTELVPEQV---QRRDGEVDTVNANQHVTQMLAASLGLKMCDSIRRILLYTKPHHESKSFFSFCRGVFPIHELCGTITALGIAKRDLLGVAIPLWKILLPSVVVHGMANFRGMK 742
BLAST of NO02G02050 vs. NCBI_GenBank
Match: EJK63190.1 (hypothetical protein THAOC_16170 [Thalassiosira oceanica]) HSP 1 Score: 189.1 bits (479), Expect = 5.300e-44 Identity = 142/445 (31.91%), Postives = 197/445 (44.27%), Query Frame = 0 Query: 358 GSGGEDLSLLLDDYPSRILSMASVARLGSLMLAASGLAYLAVVPRNSPTQHYNYLFKTNLLLVSASLAWPLLLLGLMYNAREININHLIQTFFTAATAGYVGVFLGEIVVATGLKLLAFKKLEPGMHASCPEIPSIHLPWVWKSDCTGYRPRLLTLLVADLMINCLASPVIEEAAKLLCFRWGSWIRPTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQRWRRRPLRSLLSLIFSLLLAPFSAGSGSRRYRRPDSVHSTLVYMTAASLGLKAADNARRILMYTKPEDTSKPFFALARGFFPVHELCGAFTALNLVRQDILGERMSWFRLLAPAVILHSMANFRGMKPVFKWASSSPWTEMQLQALSAPDYATALQQIW-KAVXXXXXXXVLARVLGYIMFRHYLLSKQVKIRYANY 802 G G L D+ PS+ A+ + + S M S AVVP SP L+SAS L+ ++ I TF + T GY F+ E++ T ++L FK EP + PE+PSI LPWV + Y+P+ +TL AD +C+ASPVIEE KL +W R +R P+R + S + +++ +V M AASLGLK D RRILMYTK D K +A+ RG FP+HELCGA TAL L R+D+LG + +++L PAV +H MANFRGMKP+FKW S+SPW+EMQ+ LS +Q+ K+ +L RV G+ + +YL+ +Q R Y Sbjct: 531 GDAGMQREALADNVPSK---NAATSSIHSQMGVRS-----AVVPPTSP-------------LISASPPRTSSLMKSPEGPYCELVDESIGTFHVSFTLGYALAFIAEVITTTLVRLGVFKIWEPAIFNLTPEVPSIILPWVLRE--KQYKPKRITLFAADFAASCIASPVIEEIIKLKVVQW------------------------------------------------TCRLPRNFKTGNSSKGKGRKKRVPVRGIDS-------------------PQVTNINCYMVQMLAASLGLKLFDVTRRILMYTKDNDRFKKTYAVYRGVFPIHELCGAMTALLLARRDVLGVSLPTWKILGPAVFIHGMANFRGMKPIFKWNSASPWSEMQINQLSRESDVPLWRQLMPKSYAKLVWLTILCRVFGFCIKNYYLIGRQAVQRTTVY 885
BLAST of NO02G02050 vs. NCBI_GenBank
Match: OEU08565.1 (hypothetical protein FRACYDRAFT_249457 [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 151.0 bits (380), Expect = 1.600e-32 Identity = 101/327 (30.89%), Postives = 147/327 (44.95%), Query Frame = 0 Query: 491 PSIHLPWVWKSDCTGYRPRLLTLLVADLMINCLASPVIEEAAKLLCFRWGSWIRPTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQRWRRRPLRSLLSLIFSLLLAPFSAGSGSRRYRRPD----SVHSTLVYMTAASLGLKAADNARRILMYTKPEDTSKPFFALARGFFPVHELCGAFTALNLVRQDILGERMSWFRLLAPAVILHSMANFRGMKPVFKWASSSPWTEMQL------------QALSAPDYATALQQIWKAVXXXXXXXVLARVLGYIMFRHYLLSKQVKIRYANY 802 P LPWV + YRP+ +TLLVAD++ +C+A P+IEE KL +W +R P+ + ++ + R R D +++ + M A SLG+K AD RR+ MYTK +D K +A +RG FPV ELCG TAL L R+D+LG+RM + LL PAVI+HSMAN RGMKP+FKW S++PW+EMQL ++ ++ L+ + KA +L RV GY ++++++Q R Y Sbjct: 866 PLFVLPWVLRE--YKYRPKRITLLVADIVTSCVACPIIEEFIKLRLLQW--------------------------------------------TMPLSKNFIWVQKLSNHDKKQKRMVAEPIVNDETVETXXXXXXXXSNKSKIRLGRRDGEVTNINPYISGMIAVSLGIKWADAIRRVCMYTKVQDEHKCIYAFSRGMFPVQELCGIMTALRLARRDVLGQRMPLWNLLLPAVIIHSMANLRGMKPIFKWNSATPWSEMQLSPNLFSSAETISSSMDGSGTSSTLKWLGKAFPKITWVIILFRVTGYCGKNYFMINRQAMKRTTTY 1146
BLAST of NO02G02050 vs. NCBI_GenBank
Match: XP_002177419.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC51882.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 132.5 bits (332), Expect = 5.900e-27 Identity = 94/316 (29.75%), Postives = 142/316 (44.94%), Query Frame = 0 Query: 376 LSMASVARLGSLMLAASGLAYLAVVPRNSPTQHYNYLFKTNLLLVSASLAWPLLLLGLMYNAREININHLIQTFFTAATAGYVGVFLGEIVVATGLKLLAFKKLEPGMHASCPEIPSIHLPWVWKSDCTGYRPRLLTLLVADLMINCLASPVIEEAAKLLCFRWGSWIRPTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQRWRRRPLRSLLSLIFSLLLAPFSAGSGSRRYRRPDSVHSTLVYMTAASLGLKAADNARRILMYTKPEDTSKPFFALARGFFPVHEL 692 +S ++ ++ +M+ + L Y AV PR P YN F N+ VS S P++ + +++ARE ++N ++ TFF + T GY F GE+V+AT ++LL F EP + + P +P LPWV + +C YRP+ +TLL AD +C+A+P IEE KL +W + RRR +++ G R S + + +M AASLG+K D RRILMYTK + +K F+A+ RG FP+HEL Sbjct: 649 ISFDAIQQISFMMMMTALLCYSAVSPRTLPLTEYNLRFYENIQSVSLSAVVPIISMVSVFDARENDVNRIVNTFFFSFTLGYTMAFAGEVVMATVVRLLTFFWFEPNIFSLTPMVPVPILPWVLR-ECK-YRPKRITLLAADFGTSCVAAPFIEEYMKLKIVQW------------------------------------------------FVDLPRNFNWSTRISSRSKKRRRIAEAVV------------RGPAERDI---VSANQYVTHMLAASLGMKLCDAGRRILMYTKVSNENKSFYAICRGIFPIHEL 899
BLAST of NO02G02050 vs. NCBI_GenBank
Match: CBJ32640.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 109.8 bits (273), Expect = 4.100e-20 Identity = 95/359 (26.46%), Postives = 141/359 (39.28%), Query Frame = 0 Query: 372 PSRILSMASVAR-LGSLMLAASGLAYLAVVPRNSPTQHYNYLFKTNLLLVSASLAWPLLLLGLMYNAREININHLIQTFFTAATAGYVGVFLGEIVVATGLKLLAFKKLEPGMHASCPEIPSIHLPWVWKSDCTGYRPRLLTLLVADLMINCLASPVIEEAAKLLCFRWGSWIRPTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQRWRRRPLRSLLSLIFSLLLAPFSAGSGSRRYRRPDSVHSTLVYMTAASLGLKAADNARRILMYTKPEDTSKPFFALARGFFPVHELCGAFTALNLVRQDILGERMSWFRLLAPAVILHSMANFR 730 P + L++ S +R +G+ +A +G A+LAV P N+P Y LF+ NL L++ASL P + L+Y+ + NIN ++ A T GY+ F EIV AT +L +EP P +P+I LPWV +RP R + VH+ L+Y+ +++GLKAA +R+L+YT+ K FFA+ARGFFP+ ELCG+ A+NL R+DILG+RM+ +L V L++ A FR Sbjct: 440 PPKTLTLRSWSRIMGAAGIATAG-AFLAVSPNNAPRDLYLALFRRNLGLIAASLVGPAVYSFLLYDGSKANINTYVRVVTFAFTWGYLISFALEIVAATSFQLCVLAVMEPKAFDLTPHVPAIFLPWV--------------------------------------------LRPF---------------------------------------------------------------RGRAAXXXXXXXXXXXXXXXXXXXXXXXXXTHVHTYLLYVLGSAMGLKAACTMQRVLVYTREYHEHKTFFAIARGFFPLFELCGSIMAMNLARRDILGDRMNRLQLFFVPVSLNAYAVFR 690 The following BLAST results are available for this feature:
BLAST of NO02G02050 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 8
Relationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO02G02050 ID=NO02G02050|Name=NO02G02050|organism=Nannochloropsis oceanica|type=gene|length=3220bpback to top protein sequence of NO02G02050.1 >NO02G02050.1-protein ID=NO02G02050.1-protein|Name=NO02G02050.1|organism=Nannochloropsis oceanica|type=polypeptide|length=804bpback to top Synonyms
Publications
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