NO02G01990, NO02G01990 (gene) Nannochloropsis oceanica

Overview
NameNO02G01990
Unique NameNO02G01990
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length4141
Alignment locationchr2:566844..570984 -

Link to JBrowse

Properties
Property NameValue
DescriptionSANT/Myb domain protein
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr2genomechr2:566844..570984 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO:0003677DNA binding
Vocabulary: INTERPRO
TermDefinition
IPR009057Homeodomain-like
IPR017930Myb_dom
IPR001005SANT/Myb
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Homology
BLAST of NO02G01990 vs. NCBI_GenBank
Match: EWM30452.1 (SANT/Myb domain protein [Nannochloropsis gaditana])

HSP 1 Score: 431.8 bits (1109), Expect = 3.500e-117
Identity = 271/547 (49.54%), Postives = 316/547 (57.77%), Query Frame = 0
Query:   59 ETGRENTGRWTCEEHVLFLKGLEMHGKGWKKIAKLIKTRTVVQIRTHAQKYFQKLAKAKKNGHHGDMLGMEGSHFGGKRVKFTGKRRGLVYNSYLVGAEATSAAISPALQTFMPANLG--MEGERVGLMTDKEEDAAIEKGLYRFLSPVVLDPATRNLDASAPEILPLPPSTPAMGVHHTSSRGXXXXXXXXXXXXXXXXXXDSIVMGDGGSDQDAESSLGEPLPTLARVTPEMYTRCGVPEWFKKGGDIDELLIDAAGLDWRSDSGGDARKVVDQGTSILNANINGSNCATVAPAVVRKGCGSNTNKMNSAAPVLNMTGLAGAGGLSGWKGXXXXXXXXXXXXXXXXNMAL-TANASAGCGQGSWGVRGGAQXXXXXXXXXXXXXXXXXXXXXXXXXXIHVKEEGMELLRVMADRGTV--HGHVHEEDGFAAFDPHHVELKEEHSHHDLLLEELPHDSNHDDALAHIVFSVNGES--DLHSLPRGAXXXXXXXXXXXXXXXXXXXXXXXXXXDIHLHAYDAYLEEEGADGGHGLLLLEDLDGGIEF 599
            ETGRENTGRWTCEEHVLFLKGLEMHGKGWKKIAKLIKTRTVVQIRTHAQKYFQKLAKAKKNGHHGDMLGMEG+ FGGKRVKFTGKRRGLVY SYLVGAEATSAAISPALQ++MP +     EGE    ++DKEEDAAIEKGLYRFLSPVVLD A  NLDA+APE+  LPPSTP  GVH     G                  D++ + +  +  DA+SS GEPLP LARVT +MY RC VP WF KGGDI+ELL DAA +DWR DSGGDA K  ++G SILNANI  S+ A       +    +    +  A  +   +    +G     K                   +L TAN   G   G      G Q                           H    G ++ +  A  GT+   G +   + FA+ DPHHVELKEEHSHH+L LEEL     +DD  AH+ F  N E+  D H+                               D+H+  YD + ++   DG HG LLL+D DGGIEF
Sbjct:   94 ETGRENTGRWTCEEHVLFLKGLEMHGKGWKKIAKLIKTRTVVQIRTHAQKYFQKLAKAKKNGHHGDMLGMEGTRFGGKRVKFTGKRRGLVYGSYLVGAEATSAAISPALQSYMPGSWAGREEGE---ALSDKEEDAAIEKGLYRFLSPVVLDAAASNLDATAPEV--LPPSTPGTGVHANGVVG----ADGETTEEDGSSGGDNVDVSE--TTDDADSSSGEPLPRLARVTNDMYERCSVPTWFMKGGDIEELLADAAAIDWREDSGGDAVKAEERGASILNANIENSDQAQSHRNGEKVAVPNRVAAVKVAGNISADSSYITSGASQCVKHPPTTNTIDGKRSNMNSGQSLPTANGRNGAASGRCVTGRGQQQKKKQPKTQESGNHGKQHLANK-----HSAPTG-DMFQSKAGAGTIVLQGDI---NCFASLDPHHVELKEEHSHHELRLEELQQSGVNDDTFAHMDFLANDEAPVDHHA-------------GHLHTISTHDDVHSHADHDVHMRNYDVFWKDTVPDGDHG-LLLDDFDGGIEF 606          
BLAST of NO02G01990 vs. NCBI_GenBank
Match: CBJ27465.1 (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 135.2 bits (339), Expect = 6.700e-28
Identity = 79/150 (52.67%), Postives = 95/150 (63.33%), Query Frame = 0
Query:   63 ENTGRWTCEEHVLFLKGLEMHGKGWKKIAKLIKTRTVVQIRTHAQKYFQKLAKAKKNGHHGDMLGMEGSHFGGKRVKFTGKRRGLVYNSYLVGAEATSAAISPALQTFMPANLGMEGERVGLMTDKEEDAAIEKGLYRFLSPVVLDPATR 213
            +NTGRWT +EH LFL+GLE+HGKGWKKIA LIKTRTVVQIRTHAQKYFQK+AKAK+NG HGD+      H  G R K  G+RR       L G    S A++P+LQ ++ A  G                A+E GLYRFLSP+ +    R
Sbjct:    4 KNTGRWTYDEHRLFLRGLELHGKGWKKIASLIKTRTVVQIRTHAQKYFQKIAKAKQNGEHGDVAMDSKGH--GSRRKSRGRRR---MEDLLRG----STAVAPSLQPYV-AGAG----------------AVETGLYRFLSPITIQDLER 127          
BLAST of NO02G01990 vs. NCBI_GenBank
Match: GAX28359.1 (protein MYSM1 [Fistulifera solaris])

HSP 1 Score: 130.6 bits (327), Expect = 1.700e-26
Identity = 103/315 (32.70%), Postives = 142/315 (45.08%), Query Frame = 0
Query:   63 ENTGRWTCEEHVLFLKGLEMHGKGWKKIAKLIKTRTVVQIRTHAQKYFQKLAKAKKNGHHGDMLGMEGSHFGG-----------------KRVKFTGKRRGLVYN-----------SYL-----VGAEATSAAISPALQTFMPANLGMEGERVGLMTDKE-EDAAIEKGLYRFLSPVVLDPATRNLDASAPEILPLPPSTPAMGVHHTSSRGXXXXXXXXXXXXXXXXXXDSIVMGDGGSDQDAESSLGEPLPTLARVTPEMYTRCGVPEWFKKGGDIDELLIDAAGLDWRSDSGGDARKVVDQGTSILNANING 344
            ENTGRWT EEH LFL+GLE HGKGWKKIA LIK+RTVVQIRTHAQKYFQKLAKA++NG  GD + MEG   GG                 +R   TG +R ++ +           ++L      G       I+PAL  F+          + L+TD       +E  L+RFL+PV +  A+ +++  A +    P + P+   H  +S                            GS       L         + P        P W+ KG D+D LL  +  LDW +D+G        Q   + +++ +G
Sbjct:   97 ENTGRWTAEEHRLFLQGLEQHGKGWKKIASLIKSRTVVQIRTHAQKYFQKLAKARQNGEEGD-ITMEGR--GGNASITSNTTATAAMTNKRRRHITGTKRKVIQSIVASAQRQAKKAHLTELGDAGKSPVVPGIAPALAYFVTPTPSSASPDIDLLTDDHISGPVLEDSLFRFLTPVPI--ASDHVNDVARQAGANPITLPSTNSHALTS--------------------------VPGSSPTGVQDLS--------IYPSWTDAKDPPSWYAKGADVDALLDVSDTLDWLADTGDLDEDYQPQANDVEDSSFSG 372          
BLAST of NO02G01990 vs. NCBI_GenBank
Match: GAX24276.1 (protein MYSM1 [Fistulifera solaris])

HSP 1 Score: 130.2 bits (326), Expect = 2.200e-26
Identity = 108/316 (34.18%), Postives = 145/316 (45.89%), Query Frame = 0
Query:   63 ENTGRWTCEEHVLFLKGLEMHGKGWKKIAKLIKTRTVVQIRTHAQKYFQKLAKAKKNGHHGDMLGMEGSHFGG-----------------KRVKFTGKRRGLVY-------------NSYLVGAEATSAA---ISPALQTFM-PANLGMEGERVGLMTDKE-EDAAIEKGLYRFLSPVVLDPATRNLDASAPEILPLPPSTPAMGVHHTSSRGXXXXXXXXXXXXXXXXXXDSIVMGDGGSDQDAESSLGEPLPTLARVTPEMYTRCGVPEWFKKGGDIDELLIDAAGLDWRSDSGGDARKVVDQGTSILNANING 344
            ENTGRWT EEH LFL+GLE HGKGWKKIA LIK+RTVVQIRTHAQKYFQKLAKA++NG  GD + MEG   GG                 +R   TG +R ++              N   +G  + + A   I+PAL  F+ P      G    LMTD      A+E  L+RFL+PV +  AT +++  A +    P + P       S+ G                   ++    G S    +            + P        P W+ KG D+D LL  +  LDW +D+G        Q   +  ++ +G
Sbjct:   96 ENTGRWTAEEHRLFLQGLEQHGKGWKKIASLIKSRTVVQIRTHAQKYFQKLAKARQNGEEGD-ITMEGR--GGNASITSNTTATAAMTNKRRRHITGTKRKVIQSVVASAQRQAKKANLTEIGNPSKNVAVPGIAPALAYFVTPTPSSSAGPDTDLMTDDHISGPALEDSLFRFLTPVPI--ATDHVNDVARQAGANPITLP-------STNG------------------QALASVPGRSPTGVQD---------LSIYPSWTDAKDPPSWYAKGADVDALLDVSDTLDWLADTGDLDEDYQPQANDVDESDFSG 372          
BLAST of NO02G01990 vs. NCBI_GenBank
Match: XP_002184266.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC44444.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 119.4 bits (298), Expect = 3.800e-23
Identity = 108/284 (38.03%), Postives = 133/284 (46.83%), Query Frame = 0
Query:   63 ENTGRWTCEEHVLFLKGLEMHGKGWKKIAKLIKTRTVVQIRTHAQKYFQKLAKAKKNGHHGDMLGMEGSHFGG---------------KRVKFTGKRR----GLVYNSYLVGAEATSAAISPALQTFMPANLGMEGERVGLMTDKEEDAAIEKGL---YRFLSPVVLD-PATRNLDASAPEILPLPPSTPAMGVHHTSSRGXXXXXXXXXXXXXXXXXXDSIVMGDGGSDQDAESSLGEPLPTLARVTPEMYTRCGVPEWFKKGGDIDELLIDAAGLDWRSDSG 324
            ENTGRWT EEH LFL+GLE HGKGWKKIA LIK+RTVVQIRTHAQKYFQKLAKA++NG  GD + MEG   GG               +R + TG +R     +V ++   G +  +A  +P     +P  L      +   T        + G      ++SP  L  PA    D+    + PLP S P +        G         XXXXXXXXX       G SD                + P        P W+ KG DID LL     LDW  D+G
Sbjct:  115 ENTGRWTAEEHRLFLQGLEQHGKGWKKIASLIKSRTVVQIRTHAQKYFQKLAKARQNGEEGD-VAMEGR--GGVASITSVSTTAVLPKRRRQTTGTKRKAIQSVVASAQRQGKKLAAAKTNPTRHHPLPPPLPTVAPALAHYTLPSTAMMAKNGTAVKEEYVSPTNLSGPALE--DSLFRFLTPLPVSEPPLN-EVARQAGANPISLPTDXXXXXXXXXXXXXSPTGVSD--------------LMLYPSWTDSKEPPSWYSKGADIDALLDMGDSLDWLDDTG 378          
BLAST of NO02G01990 vs. NCBI_GenBank
Match: XP_002184267.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC44445.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 119.4 bits (298), Expect = 3.800e-23
Identity = 108/284 (38.03%), Postives = 133/284 (46.83%), Query Frame = 0
Query:   63 ENTGRWTCEEHVLFLKGLEMHGKGWKKIAKLIKTRTVVQIRTHAQKYFQKLAKAKKNGHHGDMLGMEGSHFGG---------------KRVKFTGKRR----GLVYNSYLVGAEATSAAISPALQTFMPANLGMEGERVGLMTDKEEDAAIEKGL---YRFLSPVVLD-PATRNLDASAPEILPLPPSTPAMGVHHTSSRGXXXXXXXXXXXXXXXXXXDSIVMGDGGSDQDAESSLGEPLPTLARVTPEMYTRCGVPEWFKKGGDIDELLIDAAGLDWRSDSG 324
            ENTGRWT EEH LFL+GLE HGKGWKKIA LIK+RTVVQIRTHAQKYFQKLAKA++NG  GD + MEG   GG               +R + TG +R     +V ++   G +  +A  +P     +P  L      +   T        + G      F+SP  L  PA    D+    + P+P S P +        G         XXXXXXXXX       G SD                + P        P W+ KG DID LL     LDW  D+G
Sbjct:  115 ENTGRWTAEEHRLFLQGLEQHGKGWKKIASLIKSRTVVQIRTHAQKYFQKLAKARQNGEEGD-VAMEGR--GGVASITSVSTTAVLPKRRRQTTGTKRKAIQSVVASAQRQGKKLAAAKTNPTRHHPLPPPLPTVAPALAHYTLPSTAMMAKNGTAVKEEFVSPTNLSGPALE--DSLFRFLTPVPVSEPPLN-EVARQAGANPISLPTDXXXXXXXXXXXXXSPTGVSD--------------LMLYPSWTDSKEPPSWYSKGADIDALLDMGDSLDWLDDTG 378          
BLAST of NO02G01990 vs. NCBI_GenBank
Match: EJK60893.1 (hypothetical protein THAOC_18691 [Thalassiosira oceanica])

HSP 1 Score: 105.1 bits (261), Expect = 7.500e-19
Identity = 49/58 (84.48%), Postives = 54/58 (93.10%), Query Frame = 0
Query:   63 ENTGRWTCEEHVLFLKGLEMHGKGWKKIAKLIKTRTVVQIRTHAQKYFQKLAKAKKNG 121
            ENTGRWT EEH LFL+GLE HGKGWKKIA LIK+RTVVQIRTHAQKYFQKLAKA+++G
Sbjct:  308 ENTGRWTAEEHRLFLQGLERHGKGWKKIATLIKSRTVVQIRTHAQKYFQKLAKARQSG 365          
BLAST of NO02G01990 vs. NCBI_GenBank
Match: CBN78551.1 (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 104.0 bits (258), Expect = 1.700e-18
Identity = 47/62 (75.81%), Postives = 56/62 (90.32%), Query Frame = 0
Query:   59 ETGRENTGRWTCEEHVLFLKGLEMHGKGWKKIAKLIKTRTVVQIRTHAQKYFQKLAKAKKNG 121
            + G ENTGRWT +EH LFL+GLE+HGKGWK+IA LI+TRTVVQIRTHAQKYFQKL+KA+ +G
Sbjct:   25 QPGNENTGRWTSDEHRLFLRGLELHGKGWKQIATLIQTRTVVQIRTHAQKYFQKLSKAQASG 86          
BLAST of NO02G01990 vs. NCBI_GenBank
Match: XP_002292776.1 (predicted protein [Thalassiosira pseudonana CCMP1335] >EED89972.1 predicted protein [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 101.7 bits (252), Expect = 8.200e-18
Identity = 49/61 (80.33%), Postives = 52/61 (85.25%), Query Frame = 0
Query:   63 ENTGRWTCEEHVLFLKGLEMHGKGWKKIAKLIKTRTVVQIRTHAQKYFQKLAKAKKNGHHG 124
            ENTGRWT EEH LFL+GLE HGKGWKKIA LIK+RTVVQIRTHAQKYFQKLAKA+     G
Sbjct:  416 ENTGRWTAEEHRLFLQGLEQHGKGWKKIAGLIKSRTVVQIRTHAQKYFQKLAKARAGDGSG 476          
BLAST of NO02G01990 vs. NCBI_GenBank
Match: OEU20545.1 (hypothetical protein FRACYDRAFT_165241, partial [Fragilariopsis cylindrus CCMP1102])

HSP 1 Score: 99.8 bits (247), Expect = 3.100e-17
Identity = 47/54 (87.04%), Postives = 51/54 (94.44%), Query Frame = 0
Query:   67 RWTCEEHVLFLKGLEMHGKGWKKIAKLIKTRTVVQIRTHAQKYFQKLAKAKKNG 121
            RWT EEH LFL+GLE+HGKGWKKIA LIK+RTVVQIRTHAQKYFQKLAKAK+NG
Sbjct:    1 RWTSEEHNLFLQGLELHGKGWKKIAGLIKSRTVVQIRTHAQKYFQKLAKAKQNG 54          
The following BLAST results are available for this feature:
BLAST of NO02G01990 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM30452.13.500e-11749.54SANT/Myb domain protein [Nannochloropsis gaditana][more]
CBJ27465.16.700e-2852.67conserved unknown protein [Ectocarpus siliculosus][more]
GAX28359.11.700e-2632.70protein MYSM1 [Fistulifera solaris][more]
GAX24276.12.200e-2634.18protein MYSM1 [Fistulifera solaris][more]
XP_002184266.13.800e-2338.03predicted protein [Phaeodactylum tricornutum CCAP ... [more]
XP_002184267.13.800e-2338.03predicted protein [Phaeodactylum tricornutum CCAP ... [more]
EJK60893.17.500e-1984.48hypothetical protein THAOC_18691 [Thalassiosira oc... [more]
CBN78551.11.700e-1875.81conserved unknown protein [Ectocarpus siliculosus][more]
XP_002292776.18.200e-1880.33predicted protein [Thalassiosira pseudonana CCMP13... [more]
OEU20545.13.100e-1787.04hypothetical protein FRACYDRAFT_165241, partial [F... [more]

Pages

back to top
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL020nonsL020Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
nonsL016nonsL016Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR032ncniR032Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR005ngnoR005Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR002ngnoR002Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR000ngnoR000Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK006843NSK006843Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO02G01990.1NO02G01990.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|636086gene_784Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100100g17gene213Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO02G01990.1NO02G01990.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO02G01990 ID=NO02G01990|Name=NO02G01990|organism=Nannochloropsis oceanica|type=gene|length=4141bp
CGCAACAGAAGGGAACAACAATGGCAAGATGGCCTGCTCTACGCGGAGAT
GTCGCCCCACACGGCGGGGCTTTAAACAAAATCTCCCTCAATGTTCGGGT
GTGCTTACGTGCTTTCGACCTACTGCCTGAAGATTTCTCTTCACTTGCAC
TCGATGGTCGAACCGAGCTTAGTGCTCCCAGAATACAGTTTGGATTGGAA
TTCTCGAGTTCTCGCCCCCTTCCTCCTTCGATTATTCACCGCGCAAATGC
TTGTCCATAATTGTTTCACACTGTGTGACAGCACAAGGTTGGTGGGTTGG
TTACCCCAGCACATACACGTCACTCATTACACACGGGCACATCTTCCTCG
CAGGGAAGACGACAGGAGGCGGCCCAGGGGAGATCGTCGCCGTAGGGTGC
AACAGCAGCAGCAGCAGCAGCAGTCCGACCAACAGCAACTACAGCAAGTC
CCAAGATGCCTATGGTCACCCTCTCCCAGgtacgtggagtgagacttgca
gcttgagagaacatttctgtggtcgtcgtggcctcgcatgggcaagaaaa
gtgggtggaggtggtgcaagttgcaagcagttctggaagcctacccggcc
tgatgcggacgagtacactcactcgtcccatgcgacattcagacccagca
tatgcatgtatgatttcatctttaaatcatgtatctgcactttagccatg
cacgtccctttccttgcaccctaatcctttaccatatgcatgtatgcttt
cctatcaaaatcatgtatctgcacccaagccatgcacgtccctttccctg
cgccttgagttatgtggagacgtcggtttcctcctccccattggaccaat
acggaaatgtactgagtagtcctgtatgctcgtcgtcgatccagttaaag
cgcgatgcttaccagaccccctcatctagtaaattgtgcctggatctgag
ccatccccccgagtacattgctttgacccgtcgctgtttaatctgacaga
ttgctataatagcaccaatgaacaatcatttttattttcacacgcaatct
cacaacatcctctccttcccctcaaaagcagGATGCAACTACTACCGCGG
CCGGCAGCATGATGCTTCCCCTCCTTCCCTCCATCCCTGCTTCCGCTACC
AGCGCCTCTTTTACCGCTCCCTCAGCGTCCTCCACGACCACCAAATCTCC
CAAAGGTACTTCCTCCATGACTCAGCTTGGAGAGACAGGGCGAGAGAATA
CTGGCCGATGGACTTGTGAAGAGCATGTGCTGTTTCTTAAAGGCCTAGAA
ATGCACGGCAAGGGTTGGAAGAAAATCGCAAAGCTAATCAAGACCCGAAC
GGTGGTCCAAATCCGCACGCACGCGCAAAAGTACTTCCAGAAATTGGCAA
AAGCCAAGAAGAACGGGCACCATGGTGATATGCTCGGAATGGAAGGCTCA
CACTTTGGGGGAAAACGTGTCAAATTTACCGGAAAGCGACGTGGGCTTGT
CTATAATTCGTATTTAGTAGGTGCCGAGGCCACCTCTGCGGCTATCTCCC
CGGCGTTGCAGACGTTTATGCCGGCGAACTTGGGGATGGAGGGCGAGCGT
GTAGGCCTTATGACGGATAAGGAGGAGGATGCAGCAATCGAGAAGGGACT
TTATCGTTTCCTCTCCCCCGTAGTGCTGGATCCCGCCACGCGTAATCTGG
ACGCCTCCGCTCCTGAGATCTTGCCCTTACCACCCAGCACTCCAGCGATG
GGCGTGCACCATACCAGTAGCAGAGGTAGCAGCAGAGGGGGGTTGGATGG
AGAGACAACGGGAGAGGAGGACGGCGGAAGCGATTCGATTGTAATGGGGG
ATGGAGGGAGCGATCAAGATGCAGAGTCGTCGTTGGGCGAGCCCTTGCCA
ACTTTGGCGCGGGTGACACCGGAGATGTACACACGGTGTGGAGTTCCGGA
ATGGTTTAAGAAAGGGGGGGACATTGACGAATTGCTCATTGATGCAGCCG
GACTCGATTGGAGAAGTGACTCGGGTGGGGACGCACGGAAGGTGGTGGAT
CAAGGGACAAGTATTTTGAATGCGAATATTAATGGTAGTAATTGTGCGAC
TGTGGCCCCGGCAGTGGTGCGGAAGGGCTGTGGTAGCAACACTAATAAGA
TGAACTCAGCGGCGCCTGTGCTGAACATGACAGGGTTGGCTGGGGCTGGA
GGGCTTTCAGGGTGGAAGGGCAAGGGTAGCGACACTAGCGAAGGTAGCAG
CAGCAACGGCAGCAGCAAGAACATGGCTTTGACGGCAAATGCGTCGGCGG
GATGTGGACAAGGGAGCTGGGGAGTGCGGGGGGGGGCACAGAAAAAGCAG
CAGCAGCAGCAACATGAGGTACCAACGCAGCAGCAGCAGGTACCAACGCA
GCAGCAGCAGGTTCACGGCATTCACGTGAAGGAGGAAGGGATGGAGCTCC
TGAGAGTCATGGCGGATAGAGGGACTGTTCACGGTCACGTCCATGAGGAG
GATGGCTTTGCGGCGTTTGACCCCCATCATGTCGAGCTGAAGGAGGAGCA
CTCCCACCATGATTTGTTGCTGGAAGAGCTGCCCCACGACAGCAACCACG
ATGACGCCCTGGCCCATATTGTGTTCTCAGTGAATGGAGAGTCGGATCTT
CATTCCTTGCCGAGGGGTGCAGGAGGGGGGGGAGCGCATGTGCATGCGCC
GCCGGTTGTGGTGGGGGGGAGACAGCATCACTATCATCATAATGACAATG
ATATCCATTTGCATGCGTACGACGCGTATTTGGAAGAGGAAGGGGCGGAT
GGCGGGCATGGGTTGTTGTTGTTGGAGGATTTGGATGGGGGAATCGAGTT
TTAGAGATGGAGAGGGAGAAGGGAAGTGTGCATGTGTAAGAAAAGAAAGG
AGGAAATTCAAGGAAGAGCTGGAAGGGAGAGAAAAAGATGCGGCTATAAT
GGTGTTCATGAAGGCACATTGCCACAAAAATAAACGAACGGGGAGAAGAG
GCGTTTGGAAAGAGGAGAGAGATGTGAAAGGACCTGAGGTAGAGTGTTGG
TTGAATTACACTAAACGCCAACCTTGTGTCCTTGTGTCGCGCGTGCACGA
ACGATCCAGACGAAGGCCACGTTTTGAATGCTGGGAGCATGCTTTCGTCT
TTCTATTGGAATCAAATCTTCCCACCCACTCATCGAGCAAGTTTTTGGAG
AAAAAGAAGAGAGAGATGTCGTGAGAGCGAGAGATTGTATGTATATTTAT
GAGACAAAGTGATATAAGTGGTAAAAATCAATATATTTGAAAAGTGGAGG
ACCATAATCAGGAAAAATGGAGAGAGGGAAAGGTGAATAGAGTGCGGAAT
GGTCGTCGAAGAATAGGAATGGCATGTGCAGGATTGATTCGTACACAAGC
CACCAAGTGCCTCTATAACCTCCTTCTCCGTACCTACAAGCCGAGAAGGA
AGGAATCTTTTCACATCATCTTCGGAGAGCAAACCGTCCTTGTCCTCAGA
CACCGAATTCCCTGTGAAGCCTCTGCGGGCTATAGGTTTGCCACCATGGC
CCTGACTGCTTGTTGAATTGTGTCAATTTTTATCAAGGCAGAGTGCAATC
ACACCACACCAACGATACACCTACTTTCTATCCCTCCGATTATGGGGCGC
CGTCAGAGTATGTGTGTTAGCTAGAAAGGCGAGACTGCAATTGCGTACGA
TAAGAAAGTAGCGATTCTGCGATATGGAGAGAAGAAAAAGGTCAGGGAAA
AAACGAGAAGGCCAGAGCGCATGGAACAATTGGAAAAATAGAAGAGACAG
ATAGTCATCGGAATGAATGAAGAATTGAGGTGCTTTTGAGACACGCCAAT
CGTTTGAGACACGCCAACCGAACAAACAGACCAAAACACAACCATAACAA
CAAACAACACAATGGCAGTGCCTATCGCTCACGCAATGCAAGGTAGAGCG
AGCGAGTAAAGGTGACGGCGAGAGAAAGGAGTCAGAAGAGAGGCACAGAA
TGGACCAAAACGGCCTTAGACAGATCCACCCTTCAACGGGATACCTCTCT
GGAGGTCCTCTGCTCGACCCCATTGAAACAAGGCAGATCAGAGAAGTGGA
AATTCATTAAACCATCAATCAAAAAATCCCTTCATTTCCCC
back to top

protein sequence of NO02G01990.1

>NO02G01990.1-protein ID=NO02G01990.1-protein|Name=NO02G01990.1|organism=Nannochloropsis oceanica|type=polypeptide|length=599bp
MPMVTLSQDATTTAAGSMMLPLLPSIPASATSASFTAPSASSTTTKSPKG
TSSMTQLGETGRENTGRWTCEEHVLFLKGLEMHGKGWKKIAKLIKTRTVV
QIRTHAQKYFQKLAKAKKNGHHGDMLGMEGSHFGGKRVKFTGKRRGLVYN
SYLVGAEATSAAISPALQTFMPANLGMEGERVGLMTDKEEDAAIEKGLYR
FLSPVVLDPATRNLDASAPEILPLPPSTPAMGVHHTSSRGSSRGGLDGET
TGEEDGGSDSIVMGDGGSDQDAESSLGEPLPTLARVTPEMYTRCGVPEWF
KKGGDIDELLIDAAGLDWRSDSGGDARKVVDQGTSILNANINGSNCATVA
PAVVRKGCGSNTNKMNSAAPVLNMTGLAGAGGLSGWKGKGSDTSEGSSSN
GSSKNMALTANASAGCGQGSWGVRGGAQKKQQQQQHEVPTQQQQVPTQQQ
QVHGIHVKEEGMELLRVMADRGTVHGHVHEEDGFAAFDPHHVELKEEHSH
HDLLLEELPHDSNHDDALAHIVFSVNGESDLHSLPRGAGGGGAHVHAPPV
VVGGRQHHYHHNDNDIHLHAYDAYLEEEGADGGHGLLLLEDLDGGIEF*
back to top
Synonyms
Publications