NO02G01920, NO02G01920 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO02G01920 vs. NCBI_GenBank
Match: EWM30446.1 (gdp-mannose transporter [Nannochloropsis gaditana]) HSP 1 Score: 513.8 bits (1322), Expect = 4.500e-142 Identity = 289/391 (73.91%), Postives = 321/391 (82.10%), Query Frame = 0 Query: 1 MSLKGIGGRGGNF-YEGRDGTVADDEEINPLMVEMRQAK---GRLEGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVTSLGDPASTAIMSCFAYTFCSITMVLANKALASQYKADIDFLVIAFQSVCAVALVVGCDAVGVIQPGSTKFDRAVAVQWLPVNIFFVSMLSTGFLSLKHLNVPMVTVFKNLTNVGIMWGEWYFYGAHVSLGAILSCAIMILGALLAAANDITFSGIGYIWMVSNCCCTAGYVLYMKHATKTVRLPKFGMVFYNNLLSLPILLVGAAVRGEFRIFIGTEDLHTMSYLSLSIYAGLVGFFLNLATLWCVSNNSATTYAVVGALNKIPLAVLGWLMFKTPITHKALVFLSMSMCGGFLYTYTKLKEVDLRPTLPR 388 MS KGIG Y G DDE +PL++EMRQ K G+ XXXXXXXXXXXXXXXXXXXXXX AI+SCFAYTFCSITMVL NKALASQY ADIDFLVIAFQS+CAV LV+ CD +G IQ GS KFD +VA+QWLPVN+FFVSMLSTGFLSL++LNVPMVT+FKNLTNVGIMWGEW YGAHVSLGAIL+CAIMILGA+LAAANDITFSGIGY WM+SNC C AGYVLYMKHATKTVRLPKF MVFYNNLLSLPILL GAAVRGE+ F+ +EDLHT +Y+SLS+YAGLVGF LNLATLWCVSNNSATTY+VVGA+NKIPLAV+GWL+F+TPIT KAL+FLS+SMCGGFLYTYTKL+E + LPR Sbjct: 1 MSTKGIGTEDSAIGYFKFKGATRDDEAEDPLLIEMRQTKNLASHSNGTGTSFVADAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAIISCFAYTFCSITMVLTNKALASQYDADIDFLVIAFQSLCAVLLVLSCDTLGFIQHGSAKFDPSVALQWLPVNLFFVSMLSTGFLSLRYLNVPMVTIFKNLTNVGIMWGEWSLYGAHVSLGAILACAIMILGAVLAAANDITFSGIGYFWMLSNCVCCAGYVLYMKHATKTVRLPKFAMVFYNNLLSLPILLAGAAVRGEYTTFLWSEDLHTAAYVSLSLYAGLVGFALNLATLWCVSNNSATTYSVVGAMNKIPLAVVGWLLFRTPITQKALIFLSLSMCGGFLYTYTKLREANQAAGLPR 391
BLAST of NO02G01920 vs. NCBI_GenBank
Match: CBN73911.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 283.1 bits (723), Expect = 1.300e-72 Identity = 145/297 (48.82%), Postives = 208/297 (70.03%), Query Frame = 0 Query: 82 ASTAIMSCFAYTFCSITMVLANKALASQYKADIDFLVIAFQSVCAVALVVGCDAVGVIQPGSTKFDRAVAVQWLPVNIFFVSMLSTGFLSLKHLNVPMVTVFKNLTNVGIMWGEWYFYGAHVSLGAILSCAIMILGALLAAANDITFSGIGYIWMVSNCCCTAGYVLYMKHATKTVRLPKFGMVFYNNLLSLPILLVGAAVRGEFRIFIGTEDLHTMSYLSLSIYAGLVGFFLNLATLWCVSNNSATTYAVVGALNKIPLAVLGWLMFKTPITHKALVFLSMSMCGGFLYTYTKLKE 379 A A+ S +Y+FCS++MV++NK LA YK+D+ FLV+ Q + A LV +G F+ + A +WLPV+I F +ML T F +L+ +NVPMVTVFKNLTN+ I+ G+W+F+ S + S A+M+ GAL A+ ND+ F+ GY WMV+NCC TAGYVLYMKHATK+++LP+FGMVFYNNLL+ +L A + G+F IF T L T++Y++ +++G+VG LN A+LWCV SATTYAVVG++N IP A+LG+ +F + I+ + F+ +SM GGF+Y++ KL+E Sbjct: 23 ALVAVSSSLSYSFCSVSMVMSNKLLAFTYKSDMAFLVVVGQCLVATILVEAVRRMG--YASYDPFNFSTARRWLPVSICFSAMLFTSFKALEVMNVPMVTVFKNLTNIVIVTGDWWFFQQAASWLVMFSMAVMVFGALFASYNDLDFNPWGYFWMVANCCTTAGYVLYMKHATKSIKLPRFGMVFYNNLLTTCLLTPAAFMMGDFTIFWTTPQLRTVTYMTALLFSGVVGVLLNFASLWCVGATSATTYAVVGSVNVIPTALLGYQLFDSAISTQMGEFMLVSMIGGFMYSFAKLQE 317
BLAST of NO02G01920 vs. NCBI_GenBank
Match: OEU09349.1 (putative GDP-mannose transporter [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 266.5 bits (680), Expect = 1.300e-67 Identity = 134/295 (45.42%), Postives = 199/295 (67.46%), Query Frame = 0 Query: 86 IMSCFAYTFCSITMVLANKALASQYK----ADIDFLVIAFQSVCAVALVVGCDAVGVIQPGSTKFDRAVAVQWLPVNIFFVSMLSTGFLSLKHLNVPMVTVFKNLTNVGIMWGEWYFYGAHVSLGAILSCAIMILGALLAAANDITFSGIGYIWMVSNCCCTAGYVLYMKHATKTVRLPKFGMVFYNNLLSLPILLVGAAVRGEFRIFIGTEDLHTMSYLSLSIYAGLVGFFLNLATLWCVSNNSATTYAVVGALNKIPLAVLGWLMFKTPITHKALVFLSMSMCGGFLYTYTKL 377 + +C +Y+FCS++MVL NK+LAS Y D++ L++ Q++ AV V GC +G + S F+ A +W PVNIFF ML TG SL++ +VPMVT+FKN++N+ G++Y +G +++ IM+ GA+ AA+ND++ S +G +WM+ NC +GYVLYMKHAT+ V+L KFGMVFYNN+L + LL A G+ +F T +HT Y +++AGLVGF LN A+L CV+ + TTY +G+LNKIP+A+LG+ +F + I+ + F+++SMCGGFLY+Y KL Sbjct: 99 LSTCLSYSFCSVSMVLVNKSLASSYNHLIDGDLNILLVVIQAIVAVFAVEGCKRLGWVDYPSFSFE--TAKEWAPVNIFFCLMLFTGMSSLQYNSVPMVTIFKNVSNITTAVGDYYCFGNKPEPLVVVAFGIMLSGAVAAASNDLSLSPMGILWMIGNCVSASGYVLYMKHATEKVKLSKFGMVFYNNVLCVVFLLPVAIAMGQTTVFFTTPAIHTPDYAMKNLFAGLVGFLLNFASLSCVATSGPTTYVTIGSLNKIPVAILGYYIFDSVISQETWFFIAVSMCGGFLYSYAKL 391
BLAST of NO02G01920 vs. NCBI_GenBank
Match: GAX13784.1 (GDP-mannose transporter [Fistulifera solaris]) HSP 1 Score: 263.8 bits (673), Expect = 8.100e-67 Identity = 138/302 (45.70%), Postives = 199/302 (65.89%), Query Frame = 0 Query: 85 AIMSCFAYTFCSITMVLANKALASQYK----ADIDFLVIAFQSVCAVALVVGCDAVGVIQPGSTKFDRAVAVQWLPVNIFFVSMLSTGFLSLKHLNVPMVTVFKNLTNVGIMWGEWYFYGAHVSLGAILSCAIMILGALLAAANDITFSGIGYIWMVSNCCCTAGYVLYMKHATKTVRLPKFGMVFYNNLLSLPILLVGAAVRGEFRIFIGTEDLHTMSYLSLSIYAGLVGFFLNLATLWCVSNNSATTYAVVGALNKIPLAVLGWLMFKTPITHKALVFLSMSMCGGFLYTYTKLKEVDLR 383 AI SC Y+FCS++M+L NK+LAS Y +++ L++ FQ++ A V C + +Q ++ A A W PVN+FF ML TG +SL+ +VPMVTVFKN+TN+ G++ F+G+ A+ + A+M LGA+ AA NDI + G WMV+NC T+ YVLYMK AT+ ++L KFGMVF NN+L + +LL A + GE F+ E +HT Y + +AG +GFFLN A+L CVS +TYA+VG+LNKIP+A+LG+L+F + I K F+S+S+CGGFLY+Y K++ + R Sbjct: 53 AIASCTFYSFCSVSMILVNKSLASSYNHLIDGNLNVLLVVFQAIIAAVSVEVCRMMHWVQYPPLNWETARA--WAPVNVFFCLMLFTGMVSLETNSVPMVTVFKNVTNIITTAGDYIFFGSQPEGLAMAAFAVMFLGAVAAAQNDIHVTATGLFWMVANCLATSSYVLYMKFATQNIKLSKFGMVFVNNVLCVALLLPVAFLNGELATFLNAEQVHTWDYAGKNAFAGFIGFFLNFASLHCVSVTGPSTYAIVGSLNKIPVAILGYLIFDSVIDSKTWFFISVSLCGGFLYSYAKIRSANQR 352
BLAST of NO02G01920 vs. NCBI_GenBank
Match: GAX21877.1 (GDP-mannose transporter [Fistulifera solaris]) HSP 1 Score: 261.2 bits (666), Expect = 5.300e-66 Identity = 137/302 (45.36%), Postives = 198/302 (65.56%), Query Frame = 0 Query: 85 AIMSCFAYTFCSITMVLANKALASQYK----ADIDFLVIAFQSVCAVALVVGCDAVGVIQPGSTKFDRAVAVQWLPVNIFFVSMLSTGFLSLKHLNVPMVTVFKNLTNVGIMWGEWYFYGAHVSLGAILSCAIMILGALLAAANDITFSGIGYIWMVSNCCCTAGYVLYMKHATKTVRLPKFGMVFYNNLLSLPILLVGAAVRGEFRIFIGTEDLHTMSYLSLSIYAGLVGFFLNLATLWCVSNNSATTYAVVGALNKIPLAVLGWLMFKTPITHKALVFLSMSMCGGFLYTYTKLKEVDLR 383 AI SC Y+FCS++M+L NK+LAS Y +++ L++ FQ++ A V C + +Q ++ A A W PVN+FF ML TG +SL+ +VPMVTVFKN+TN+ G++ F+ + A+ + A+M LGA+ AA NDI + G WMV+NC T+ YVLYMK AT+ ++L KFGMVF NN+L + +LL A + GE F+ E +HT Y + +AG +GFFLN A+L CVS +TYA+VG+LNKIP+A+LG+L+F + I K F+S+S+CGGFLY+Y K++ + R Sbjct: 53 AIASCTFYSFCSVSMILVNKSLASSYNHLIDGNLNVLLVVFQAIIAAVSVEICRMMHWVQYPPLNWETAKA--WAPVNVFFCLMLFTGMVSLETNSVPMVTVFKNVTNIITTAGDYIFFDSQPEGLAMAAFAVMFLGAVAAAQNDIHVTATGLFWMVANCLATSSYVLYMKFATQNIKLSKFGMVFVNNVLCVALLLPVAFLNGELATFLNAEQVHTWDYAGKNAFAGFIGFFLNFASLHCVSVTGPSTYAIVGSLNKIPVAILGYLIFDSVIDSKTWFFISVSLCGGFLYSYAKIRSANQR 352
BLAST of NO02G01920 vs. NCBI_GenBank
Match: EJK45870.1 (hypothetical protein THAOC_35494, partial [Thalassiosira oceanica]) HSP 1 Score: 253.8 bits (647), Expect = 8.400e-64 Identity = 134/300 (44.67%), Postives = 192/300 (64.00%), Query Frame = 0 Query: 82 ASTAIMSCFAYTFCSITMVLANKALASQY----KADIDFLVIAFQSVCAVALVVGCDAVGVIQPGSTKFDRAVAVQWLPVNIFFVSMLSTGFLSLKHLNVPMVTVFKNLTNVGIMWGEWYFYGAHVSLGAILSCAIMILGALLAAANDITFSGIGYIWMVSNCCCTAGYVLYMKHATKTVRLPKFGMVFYNNLLSLPILLVGAAVRGEFRIFIGTEDLHTMSYLSLSIYAGLVGFFLNLATLWCVSNNSATTYAVVGALNKIPLAVLGWLMFKTPITHKALVFLSMSMCGGFLYTYTKLK 378 AS ++++ Y+ CS+ MVL NK+LAS Y + D++ L++ FQ++ AV V +G + F+ + A W PVNI F ML TG SL+H +VPMVTVFKN+TN+ G+ YGA V + + IM+ GA++AA N + G WM++NC CT+GYVLY+K ATK+V+L KFGMVFYNN+L + L V G+ F+GT+ LHT Y + +AG VGFFLN A+L CV+ TTYA++G+LNK+P+A+ G+L+F I+ + F+S+S+ GG LYT KL+ Sbjct: 88 ASKSLIASAMYSGCSVGMVLVNKSLASSYNHLIEGDLNILLVVFQAIAAVVCVESSKHMGWVD--YPAFNLSTARSWAPVNILFCGMLFTGMASLEHNSVPMVTVFKNITNIMTTLGDCILYGASVDFLVLAAFGIMLAGAVMAARNSADVTQTGLFWMLANCLCTSGYVLYLKFATKSVKLSKFGMVFYNNVLCMLFLFPVTLVNGQLGKFLGTKALHTADYAVKNAFAGFVGFFLNFASLNCVAQTGPTTYAMLGSLNKVPIAIFGYLIFDNAISEETWTFISISLMGGILYTIAKLR 385
BLAST of NO02G01920 vs. NCBI_GenBank
Match: CBJ33733.1 (GDP-mannose transporter [Ectocarpus siliculosus]) HSP 1 Score: 252.7 bits (644), Expect = 1.900e-63 Identity = 143/305 (46.89%), Postives = 202/305 (66.23%), Query Frame = 0 Query: 83 STAIMSCFAYTFCSITMVLANKALASQYKADIDFLVIAFQSVCAVALVVGCDAVGVIQPGSTKFDRAVAVQWLPVNIFFVSMLSTGFLSLKHLNVPMVTVFKNLTNVGIMWGEWYFYGAHVSLGAILSCAIMILGALLAAANDITFSGIGYIWMVSNCCCTAGYVLYMKHATKTVRLPKFGMVFYNNLLSLPILLVGAAVRGE-FRI-------FIGTEDLHTMSYLSLSIYAGLVGFFLNLATLWCVSNNSATTYAVVGALNKIPLAVLGW-LMFKTPITHKALVFLSMSMCGGFLYTYTKLKE 379 + AI SC A +F SI+M+LANK LA + A + FL +AFQ AV LV G++Q F+ A A++W P+ IFF +ML + FLS++++ VPMVTVFK+LTN+ I+ G+++++ + +LS A+M GA+LA+ +DI FS GY WM +NC TA YVL MK AT+T++LPKFGMVFYNNLL I+L A GE F + F+ DLHT +YLS+++ AG GFFLN A LWCV SATTYAVV +N P+++LG+ L+ PI+ + F+ +++ GGF+Y+ K+KE Sbjct: 86 ANAIASCTALSFFSISMILANKFLAGSFNAKLHFLPMAFQCFIAVLLVEASRMKGLVQ--YEPFNMATAMRWFPIAIFFCTMLLSSFLSMQYMGVPMVTVFKSLTNLIIVTGDYFWHSQIATPLVLLSLAVMTGGAILASWSDIEFSAWGYFWMSANCFATASYVLTMKFATRTMKLPKFGMVFYNNLLGCLIMLPLAMCFGEVFTLESTGLVGFLDRADLHTPTYLSINLGAGAAGFFLNFAALWCVGATSATTYAVVNTVNNFPVSILGYFLLPSAPISRQQWEFIVVNIVGGFIYSAAKIKE 388
BLAST of NO02G01920 vs. NCBI_GenBank
Match: XP_002176711.1 (predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1] >EEC51174.1 predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 250.8 bits (639), Expect = 7.100e-63 Identity = 134/296 (45.27%), Postives = 191/296 (64.53%), Query Frame = 0 Query: 85 AIMSCFAYTFCSITMVLANKALASQY----KADIDFLVIAFQSVCAVALVVGCDAVGVIQPGSTKFDRAVAVQWLPVNIFFVSMLSTGFLSLKHLNVPMVTVFKNLTNVGIMWGEWYFYGAHVSLGAILSCAIMILGALLAAANDITFSGIGYIWMVSNCCCTAGYVLYMKHATKTVRLPKFGMVFYNNLLSLPILLVGAAVRGEFRIFIGTEDLHTMSYLSLSIYAGLVGFFLNLATLWCVSNNSATTYAVVGALNKIPLAVLGWLMFKTPITHKALVFLSMSMCGGFLYTYTKL 377 A+ +C Y+FCS++M+L NK+LAS+Y D++ L++ FQ+V AV V C G ++ + AVA W PVNIFF ML TG SL+ +VPMVTVFKN+TN+ G++ +GA ++ +M+ GA+ AA ND+ + +G WM NC T GYVLYMK AT++V++ KFGMV+ NN+L + LL A G+ +F T DLHT+ Y + +AG VGFFLN A+L CV TTYA+VG+LNK+P+A+LG+ +F IT + F+ +SMCGGFLY++ K+ Sbjct: 15 AVTACTLYSFCSVSMILVNKSLASRYVPNDGCDLNVLLVVFQAVTAVVCVEICRKAGWVEYPPLTW--AVAKSWAPVNIFFCLMLFTGMASLQFNSVPMVTVFKNVTNILTTAGDYVCFGARPEGLVYVAFGVMLSGAVAAAWNDVEITLVGLFWMAMNCVATCGYVLYMKFATQSVKMSKFGMVYVNNVLCIVFLLPAAYALGQVDMFWNTPDLHTIDYGIKNFWAGFVGFFLNFASLNCVQTTGPTTYAIVGSLNKVPVAMLGFFLFDNVITPQTWFFIGVSMCGGFLYSFAKI 308
BLAST of NO02G01920 vs. NCBI_GenBank
Match: XP_002288727.1 (predicted protein, partial [Thalassiosira pseudonana CCMP1335] >EED94163.1 predicted protein, partial [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 246.1 bits (627), Expect = 1.800e-61 Identity = 124/266 (46.62%), Postives = 178/266 (66.92%), Query Frame = 0 Query: 113 DIDFLVIAFQSVCAVALVVGCDAVGVIQPGSTKFDRAVAVQWLPVNIFFVSMLSTGFLSLKHLNVPMVTVFKNLTNVGIMWGEWYFYGAHVSLGAILSCAIMILGALLAAANDITFSGIGYIWMVSNCCCTAGYVLYMKHATKTVRLPKFGMVFYNNLLSLPILLVGAAVRGEFRIFIGTEDLHTMSYLSLSIYAGLVGFFLNLATLWCVSNNSATTYAVVGALNKIPLAVLGWLMFKTPITHKALVFLSMSMCGGFLYTYTKLKE 379 D++ L++ FQ++ AV V ++G + KF+ A W PVN+ F ML TG SL+H +VPMVTVFKN+TN+ G+ YGA + + I + IM+ GA++AA ND + G WM++NC CT+GYVLY+K+ATK+V+L KFGMVFYNN+L L + GEF F+ T+ LHT+ Y + +AG VGFFLN A+L CV+ TTYA++G+LNKIP+A++G+L+F + I+ + F+S+S+ GGFLYT KL+E Sbjct: 3 DLNILLVVFQAIAAVICVEFSKSMGWVD--YPKFNFRTAQLWAPVNLLFCGMLFTGMASLEHNSVPMVTVFKNITNIMTTIGDCILYGASIEILVIAAFGIMLAGAVMAARNDADVTQTGLFWMLANCLCTSGYVLYLKYATKSVKLSKFGMVFYNNVLCSAFLFPVTVMNGEFSTFMNTKALHTVDYAVKNAFAGFVGFFLNFASLNCVAQTGPTTYAMIGSLNKIPIAIMGYLIFDSTISEETWTFISISLLGGFLYTIAKLRE 266
BLAST of NO02G01920 vs. NCBI_GenBank
Match: EJK59623.1 (hypothetical protein THAOC_20121 [Thalassiosira oceanica]) HSP 1 Score: 221.9 bits (564), Expect = 3.500e-54 Identity = 126/297 (42.42%), Postives = 179/297 (60.27%), Query Frame = 0 Query: 82 ASTAIMSCFAYTFCSITMVLANKALASQYKA--DIDFLVIAFQSVCAVALVVGCDAVGVIQPGSTKFDRAVAVQWLPVNIFFVSMLSTGFLSLKHLNVPMVTVFKNLTNVGIMWGEWYFYGAHVSLGAILSCAIMILGA-LLAAANDITFSGIGYIWMVSNCCCTAGYVLYMKHATKTVRLPKFGMVFYNNLLSLPILLVGAAVRGEFRIFIGTEDLHTMSYLSLSIYAGLVGFFLNLATLWCVSNNSATTYAVVGALNKIPLAVLGWLMFKTPITHKALVFLSMSMCGGFLYTYTK 376 AS ++++ Y+ CS+ M+L NK LAS Y D+ L++ FQ++ A+ V +G + F + A W PVN+ F ML TG SL+H +VPMVTVFKN+TN+ G+ YGA V + + IM+ GA ++AA+N + G WMV+NC CT+GYVLY+K AT++VRL KFGMVFYNN+L + L V G+ F+G + LHT Y + AG VGFFLN A+L C++ TTYA++G+LNK+P+A+ +L+F I+ + L GG LYT K Sbjct: 48 ASKSLIASAMYSGCSVGMLLVNKNLASSYNGLKDLYILLVVFQAIAAMVCVEFSKHMGWVD--YPAFHLSTARSWAPVNVLFCGMLFTGMASLEHNSVPMVTVFKNITNIMTTLGDCILYGARVDFPVLAAFGIMLAGAVMMAASNSAGVTQTGLFWMVANCLCTSGYVLYLKFATRSVRLSKFGMVFYNNVLCVLFLFPVTLVNGQLGKFLGKKALHTADYAVKNALAGFVGFFLNFASLKCIAQAGPTTYAMLGSLNKVPIAIFRYLIFDNVISGETWFIL----MGGILYTIAK 338 The following BLAST results are available for this feature:
BLAST of NO02G01920 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO02G01920 ID=NO02G01920|Name=NO02G01920|organism=Nannochloropsis oceanica|type=gene|length=2031bpback to top protein sequence of NO02G01920.1 >NO02G01920.1-protein ID=NO02G01920.1-protein|Name=NO02G01920.1|organism=Nannochloropsis oceanica|type=polypeptide|length=388bpback to top Synonyms
Publications
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