NO02G01860, NO02G01860 (gene) Nannochloropsis oceanica

Overview
NameNO02G01860
Unique NameNO02G01860
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1086
Alignment locationchr2:537956..539041 -

Link to JBrowse

Properties
Property NameValue
DescriptionEXTL2, alpha-1,4-N-acetylhexosaminyltransferase
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr2genomechr2:537956..539041 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
GO:0016020membrane
Vocabulary: Molecular Function
TermDefinition
GO:0016757transferase activity, transferring glycosyl groups
GO:0016740transferase activity
Vocabulary: INTERPRO
TermDefinition
IPR029044Nucleotide-diphossugar_trans
IPR015338EXT_C
Homology
BLAST of NO02G01860 vs. NCBI_GenBank
Match: XP_005856199.1 (glucuronyl/N-acetylglucosaminyl transferase EXT2 [Nannochloropsis gaditana CCMP526] >EKU20149.1 glucuronyl/N-acetylglucosaminyl transferase EXT2 [Nannochloropsis gaditana CCMP526] >EWM30464.1 EXTL2, alpha-1,4-N-acetylhexosaminyltransferase [Nannochloropsis gaditana])

HSP 1 Score: 499.6 bits (1285), Expect = 8.200e-138
Identity = 250/368 (67.93%), Postives = 282/368 (76.63%), Query Frame = 0
Query:    1 MRRPYHRV-GRGTLDGLESGGRIDPIDLPFSWWRLRGCSSRSFYMLSAVLIVGCLVLHLTHLALQTAFQVELLPATSRTGGVYGSTYTIRVNSFRRNDMLKGFLQHFATCPNVEAIHVVWSDQENKPPSMADWALPLTSDQLEKVQFEEQPTDSLNNRFRVLLPVPTPAVLSLDDDLVIPCGTLDFAFSVWQAAPHSLVGFTPRLITWDAGTSATAAEG----ETEGNE--GGSGSLGGSYRYQSSFKYVWWHGRYNLILTKCCFLHREFLSLYFSSLSSATLDYIDQKRNCEDIAMQFVVSNHTGCAPPVWVQAKVTDHGQTSGISQGQDHANERSACVGRLVKEFGHLPLTTTAHKAVDARGKWLW 362
            MRRP HRV G    DGLE G R D         R RG S++  Y L AV IVGCL+LHL+H ALQ  F+V+ LP TS TGG +GSTYTIRVN+FRRNDMLK FL HFA CPNV+AI V+WSDQ   PPS+ DWA+PL++ +L KV FE QPTDSLNNRFR LLPVPTPAVLSLDDDLVIPC TLDFA+S+WQAAP SLVGFTPRL+TWD  T++    G    E E  E         GSYRY SSFK+VWWHGRYN+ILTKCCFLHR+FLSLYFSSL+   L YID +RNCEDIAMQFVV+NHT  APPVWVQA+ TD+GQ SGISQG+DHA ER ACVGRLVKEFG L LTTT+ KA+DAR  W+W
Sbjct:    1 MRRPNHRVAGWKPFDGLECGRRTDNNCFLSLASRFRGWSTKKCYYLFAVFIVGCLLLHLSHTALQMNFRVDFLPTTSPTGGPFGSTYTIRVNTFRRNDMLKRFLGHFARCPNVQAIQVIWSDQGYDPPSLMDWAIPLSTQELSKVAFEVQPTDSLNNRFRALLPVPTPAVLSLDDDLVIPCETLDFAYSIWQAAPQSLVGFTPRLVTWDGETASGVVAGKKVTELEAGEXXXXXXXXXGSYRYLSSFKHVWWHGRYNVILTKCCFLHRDFLSLYFSSLTPEVLQYIDDRRNCEDIAMQFVVANHTRGAPPVWVQARFTDYGQKSGISQGEDHARERGACVGRLVKEFGSLCLTTTSLKAIDARRSWIW 368          
BLAST of NO02G01860 vs. NCBI_GenBank
Match: XP_006848148.1 (glycosyltransferase family 64 protein C4 [Amborella trichopoda] >ERN09729.1 hypothetical protein AMTR_s00029p00228900 [Amborella trichopoda])

HSP 1 Score: 235.3 bits (599), Expect = 2.900e-58
Identity = 117/284 (41.20%), Postives = 178/284 (62.68%), Query Frame = 0
Query:   83 GSTYTIRVNSFRRNDMLKGFLQHFATCPNVEAIHVVWSDQENKPPSMADW---ALPLTSDQLEKV--QFEEQPTDSLNNRFRVLLPVPTPAVLSLDDDLVIPCGTLDFAFSVWQAAPHSLVGFTPRLITWDAGTSATAAEGETEGNEGGSGSLGGSYRYQSSFKYVWWHGRYNLILTKCCFLHREFLSLYFSSLSSATLDYIDQKRNCEDIAMQFVVSNHTGCAPPVWVQAKVTDHGQTSGISQGQDHANERSACVGRLVKEFGHLPLTTTAHKAVDARGKWLW 362
            G  YTI +N+++RND+LK  ++H+++C  + +IH+VWS+ +    S+  +    L L S    +V   F+    DSLNNRF+V+  + T A+ S+DDD+V PC T++FA+SVWQ+AP ++VGF PR+   D          +T+ +E         Y     +  VWW G Y+++L+K  F HR++L +Y + + ++  DY+ + RNCEDIAM F+V+N TG APP+WVQ K+ + G T GIS  Q H+  RS CV R V E+GH+PL  ++ KAVD+R +W W
Sbjct:   66 GKGYTILINTWKRNDLLKQSVEHYSSCSGLHSIHIVWSEPDPPTDSLRGFLHHVLQLKSINGREVDLHFDINQEDSLNNRFKVIKDLETDAIFSIDDDVVFPCPTVEFAYSVWQSAPDTMVGFVPRMHWLD----------KTKEDE--------MYYAYGGWWSVWWMGTYSMVLSKAAFFHRKYLDMYTNQMPASIRDYVTRNRNCEDIAMSFLVANATG-APPIWVQGKIFEIGST-GISSLQGHSERRSQCVNRFVIEYGHMPLVESSVKAVDSRRRWFW 329          
BLAST of NO02G01860 vs. NCBI_GenBank
Match: XP_007009055.1 (PREDICTED: glycosyltransferase family 64 protein C4 isoform X1 [Theobroma cacao] >EOY17865.1 Nucleotide-diphospho-sugar transferases superfamily protein isoform 1 [Theobroma cacao])

HSP 1 Score: 230.7 bits (587), Expect = 7.100e-57
Identity = 125/326 (38.34%), Postives = 195/326 (59.82%), Query Frame = 0
Query:   48 VLIVGCLVLHLTHLALQTAFQVELLPATSRTGGVYGST-----YTIRVNSFRRNDMLKGFLQHFATCPNVEAIHVVWSDQENKPPS-----MADWALPLTSDQLEKVQ--FEEQPTDSLNNRFRVLLPVPTPAVLSLDDDLVIPCGTLDFAFSVWQAAPHSLVGFTPRLITWDAGTSATAAEGETEGNEGGSGSLGGSYRYQSSFKYVWWHGRYNLILTKCCFLHREFLSLYFSSLSSATLDYIDQKRNCEDIAMQFVVSNHTGCAPPVWVQAKVTDHGQTSGISQGQDHANERSACVGRLVKEFGHLPLTTTAHKAVDARGKWLW 362
            +L+ GC+ L L  +A +       +  T     ++ S+     Y I +N+++R D+LK  + H+A+CP +E+IH+VWS+ +  PPS       + A+ L S    +VQ  F+    DSLNNRF+ +  + T AV S+DDD++ PC +++FAF+VWQ+AP ++VG+ PR+   D          E +G +        +Y Y   +  VWW G Y++IL+K  F H+++L LY   + ++  +YI + RNCEDIAM F+V+N TG APP+WV+ K+ + G T GIS    H++ R+ CV + V EFG +PL +T+ KAVD+R  WLW
Sbjct:   30 ILLCGCVALTLLAVANRNRDSSSFMRWTDDVDSLHSSSSSRGRYAIVMNTWKRYDLLKKSISHYASCPRLESIHLVWSEPD--PPSDSLKRFLNHAIQLNSGNGHRVQLVFDINKEDSLNNRFKEIRDLKTDAVFSIDDDVIFPCSSVEFAFTVWQSAPDTMVGYVPRMHWVD----------EKKGKD--------NYIY-GGWWSVWWTGTYSMILSKAAFFHKKYLKLYTDEMPASIKEYITRNRNCEDIAMSFLVANATG-APPIWVKGKIFEIGST-GISSLGGHSDRRTQCVNKFVAEFGRMPLVSTSMKAVDSRNVWLW 332          
BLAST of NO02G01860 vs. NCBI_GenBank
Match: XP_021295661.1 (glycosyltransferase family 64 protein C4 [Herrania umbratica])

HSP 1 Score: 228.8 bits (582), Expect = 2.700e-56
Identity = 123/326 (37.73%), Postives = 195/326 (59.82%), Query Frame = 0
Query:   48 VLIVGCLVLHLTHLALQTAFQVELLPATSRTGGVYGST-----YTIRVNSFRRNDMLKGFLQHFATCPNVEAIHVVWSDQENKPPS-----MADWALPLTSDQLEKVQ--FEEQPTDSLNNRFRVLLPVPTPAVLSLDDDLVIPCGTLDFAFSVWQAAPHSLVGFTPRLITWDAGTSATAAEGETEGNEGGSGSLGGSYRYQSSFKYVWWHGRYNLILTKCCFLHREFLSLYFSSLSSATLDYIDQKRNCEDIAMQFVVSNHTGCAPPVWVQAKVTDHGQTSGISQGQDHANERSACVGRLVKEFGHLPLTTTAHKAVDARGKWLW 362
            +L+ GC+ L L  ++ +       +  T     ++ S+     Y I +N+++R D+LK  + H+A+CP +E+IH+VWS+ +  PPS       +  + L +    +V+  F+    DSLNNRF+ +  + T AV S+DDD++ PC +++FAF+VWQ+AP ++VG+ PR+   D          ET+G +        +Y Y   +  VWW G Y++IL+K  F H+++L LY   + ++  +YI + RNCEDIAM F+V+N TG APP+WV+ K+ + G T GIS    H+N R+ CV + V EFG +PL +T+ KAVD+R  WLW
Sbjct:   30 ILLCGCVALTLLAVSNRNRDSSSFMGWTGDGDSLHSSSSPRGRYAIVMNTWKRYDLLKKSISHYASCPRLESIHIVWSEPD--PPSDSLKRFLNHVVQLNTRNGRRVELVFDINKEDSLNNRFKEIKDLKTDAVFSIDDDVIFPCSSVEFAFTVWQSAPDTMVGYVPRMHWVD----------ETKGKD--------NYIY-GGWWSVWWTGSYSMILSKAAFFHKKYLKLYTDEMPASIKEYITRNRNCEDIAMSFLVANATG-APPIWVKGKIFEIGST-GISSLGGHSNRRTQCVNKFVAEFGRMPLISTSMKAVDSRNVWLW 332          
BLAST of NO02G01860 vs. NCBI_GenBank
Match: PAN22470.1 (hypothetical protein PAHAL_D00065 [Panicum hallii])

HSP 1 Score: 227.3 bits (578), Expect = 7.900e-56
Identity = 118/289 (40.83%), Postives = 171/289 (59.17%), Query Frame = 0
Query:   73 PATSRTGGVYGSTYTIRVNSFRRNDMLKGFLQHFATCPNVEAIHVVWSDQENKPPSMADWALPLTSDQLEKVQFEEQPTDSLNNRFRVLLPVPTPAVLSLDDDLVIPCGTLDFAFSVWQAAPHSLVGFTPRLITWDAGTSATAAEGETEGNEGGSGSLGGSYRYQSSFKYVWWHGRYNLILTKCCFLHREFLSLYFSSLSSATLDYIDQKRNCEDIAMQFVVSNHTGCAPPVWVQAKVTDHGQTSGISQGQDHANERSACVGRLVKEFGHLPLTTTAHKAVDARGKWLW 362
            PA    G   G  +++ +N++RR+ +L+  + H+A C  VEA+HVVWS +   PP      + +   +   V+FE    DSLNNRFR +  + T AV S+DDDL+IPC TL FAF VWQ+AP ++VGF PR+  W A    +  E                YRY  S+  VWW G Y+++L+K  F HR++L LY + +  +  +Y+++ RNCEDIAM F+V+N TG APP+WVQ ++ + G + GIS  + H  +RS C+      +GH+PL  T  KAVD+R  W W
Sbjct:   82 PAAGPGGSPRG--FSVVINTWRRHALLRRSVAHYAACAGVEAVHVVWS-EPRPPPEPLRRGVLINGTRRGTVRFEINEADSLNNRFRPIRGLATDAVFSVDDDLIIPCSTLRFAFDVWQSAPSAMVGFVPRM-HWLADPRGSTKE----------------YRY-GSWWSVWWTGTYSMVLSKASFFHRQYLDLYTNQMLPSIRNYVNENRNCEDIAMSFLVANATG-APPIWVQGRIFEIG-SGGISSLKGHGLQRSRCLNTFAAMYGHMPLVVTTVKAVDSRRSWFW 347          
BLAST of NO02G01860 vs. NCBI_GenBank
Match: PUZ59192.1 (hypothetical protein GQ55_4G021100 [Panicum hallii var. hallii])

HSP 1 Score: 226.5 bits (576), Expect = 1.300e-55
Identity = 117/289 (40.48%), Postives = 170/289 (58.82%), Query Frame = 0
Query:   73 PATSRTGGVYGSTYTIRVNSFRRNDMLKGFLQHFATCPNVEAIHVVWSDQENKPPSMADWALPLTSDQLEKVQFEEQPTDSLNNRFRVLLPVPTPAVLSLDDDLVIPCGTLDFAFSVWQAAPHSLVGFTPRLITWDAGTSATAAEGETEGNEGGSGSLGGSYRYQSSFKYVWWHGRYNLILTKCCFLHREFLSLYFSSLSSATLDYIDQKRNCEDIAMQFVVSNHTGCAPPVWVQAKVTDHGQTSGISQGQDHANERSACVGRLVKEFGHLPLTTTAHKAVDARGKWLW 362
            PA    G   G  +++ +N++RR+ +L+  + H+A C  VEA+HVVWS +   PP      + +   +   V+FE    DSLNNRFR +  + T AV S+DDDL++PC TL FAF VWQ+AP ++VGF PR+  W A    +  E                YRY  S+  VWW G Y+++L+K  F HR++L LY + +  +  +Y+++ RNCEDIAM F+V+N TG APP+WVQ ++ + G   GIS  + H  +RS C+      +GH+PL  T  KAVD+R  W W
Sbjct:   82 PAAGPGGSPRG--FSVVINTWRRHALLRRSVAHYAACAGVEAVHVVWS-EPRPPPEPLRRGVLINGTRRGTVRFEINEADSLNNRFRPIRGLATDAVFSVDDDLIVPCSTLRFAFDVWQSAPSAMVGFVPRM-HWLADPRGSTKE----------------YRY-GSWWSVWWTGTYSMVLSKASFFHRQYLDLYTNQMLPSIRNYVNENRNCEDIAMSFLVANATG-APPIWVQGRIFEIG-VGGISSLKGHGLQRSRCLNTFAAMYGHMPLVVTTVKAVDSRTSWFW 347          
BLAST of NO02G01860 vs. NCBI_GenBank
Match: XP_021904217.1 (glycosyltransferase family 64 protein C4 isoform X1 [Carica papaya])

HSP 1 Score: 226.1 bits (575), Expect = 1.800e-55
Identity = 115/283 (40.64%), Postives = 175/283 (61.84%), Query Frame = 0
Query:   86 YTIRVNSFRRNDMLKGFLQHFATCPNVEAIHVVWSDQENKPPS-----MADWALPLTSDQLEKV--QFEEQPTDSLNNRFRVLLPVPTPAVLSLDDDLVIPCGTLDFAFSVWQAAPHSLVGFTPRLITWDAGTSATAAEGETEGNEGGSGSLGGSYRYQSSFKYVWWHGRYNLILTKCCFLHREFLSLYFSSLSSATLDYIDQKRNCEDIAMQFVVSNHTGCAPPVWVQAKVTDHGQTSGISQGQDHANERSACVGRLVKEFGHLPLTTTAHKAVDARGKWLW 362
            YTI +N+++R D+LK  + H+++C  +E+IH+VWS  E  PPS       + A  L S   +K+  +F+    DSLNNRF+ +  + T +V S+DDD++ PC T++ AF VWQ+AP ++VGF PR+   D          +++GN        G +     +  VWW G Y+++L+K  F HR++LSLY + + ++  +Y+ + RNCEDIAM F+V+N TG APP+WV+ K+ + G T GIS    H  +R+ CV R V EFG +PL +T+ KAVD+R  W W
Sbjct:   70 YTILMNTWKRYDLLKQSISHYSSCGRLESIHIVWS--EPNPPSDSLKEFLNHAAQLNSRGRQKIDLRFDINEEDSLNNRFKEIKDLKTDSVFSIDDDIIFPCSTVELAFDVWQSAPDAMVGFVPRIHWVD----------KSKGN--------GEHFIYGGWWSVWWTGTYSMVLSKAAFFHRKYLSLYTNEMPASIKEYVSRNRNCEDIAMSFLVANATG-APPIWVKGKIFEIGST-GISSLGGHNEKRTQCVNRFVDEFGRMPLVSTSVKAVDSRSAWFW 330          
BLAST of NO02G01860 vs. NCBI_GenBank
Match: XP_022871503.1 (glycosyltransferase family 64 protein C4-like isoform X1 [Olea europaea var. sylvestris])

HSP 1 Score: 226.1 bits (575), Expect = 1.800e-55
Identity = 110/281 (39.15%), Postives = 174/281 (61.92%), Query Frame = 0
Query:   86 YTIRVNSFRRNDMLKGFLQHFATCPNVEAIHVVWSDQENKPPSMADWALPLTSDQLE-----KVQFEEQPTDSLNNRFRVLLPVPTPAVLSLDDDLVIPCGTLDFAFSVWQAAPHSLVGFTPRLITWDAGTSATAAEGETEGNEGGSGSLGGSYRYQSSFKYVWWHGRYNLILTKCCFLHREFLSLYFSSLSSATLDYIDQKRNCEDIAMQFVVSNHTGCAPPVWVQAKVTDHGQTSGISQGQDHANERSACVGRLVKEFGHLPLTTTAHKAVDARGKWLW 362
            Y + +N+++RND+LK  + H+A+CP + +IH+VWS+ +    S+  +   +     +     +++F+    DSLNNRF+ +    T AV S+DDD++ PC T++FAF+VW  A  ++VGF PRL  WD           ++GN        G+Y Y+  +  VWW G Y+++L+K  F H+++L+LY  S+ S+  +Y+ + RNCEDIAM F+V+N TG APP+WV+ K+ + G T GIS    HA +RS CV +   E+G +PL +T+ KA+D+R  W W
Sbjct:   66 YALLINTWKRNDLLKQSISHYASCPGLGSIHIVWSEPDPPSDSLIKFLNHVIQSDFKDGREIELKFDINKEDSLNNRFKEIKDFKTDAVFSIDDDIIFPCTTVEFAFNVWHTAQDTMVGFVPRL-HWD---------DRSKGNR-------GNYMYRGWWS-VWWTGTYSMVLSKAAFFHKKYLNLYTYSMPSSIREYVTKNRNCEDIAMSFLVANATG-APPIWVKGKIFEIGST-GISSLGGHAEKRSHCVNKFAAEYGRMPLVSTSVKAMDSRNSWFW 326          
BLAST of NO02G01860 vs. NCBI_GenBank
Match: XP_017223298.1 (PREDICTED: glycosyltransferase family 64 protein C4-like [Daucus carota subsp. sativus])

HSP 1 Score: 225.3 bits (573), Expect = 3.000e-55
Identity = 119/329 (36.17%), Postives = 193/329 (58.66%), Query Frame = 0
Query:   49 LIVGCLVLHL---------THLALQT--AFQVELLPATSRTGGVYGSTYTIRVNSFRRNDMLKGFLQHFATCPNVEAIHVVWSDQENKPPSMADWALPLTSDQLE-----KVQFEEQPTDSLNNRFRVLLPVPTPAVLSLDDDLVIPCGTLDFAFSVWQAAPHSLVGFTPRLITWDAGTSATAAEGETEGNEGGSGSLGGSYRYQSSFKYVWWHGRYNLILTKCCFLHREFLSLYFSSLSSATLDYIDQKRNCEDIAMQFVVSNHTGCAPPVWVQAKVTDHGQTSGISQGQDHANERSACVGRLVKEFGHLPLTTTAHKAVDARGKWLW 362
            LI+GC  + +         ++L   T  +F  E   +TSR G      Y + +N+++RND+LK  + H+ +CP +++IH+VWS+ +    S+  +   +   +       +++F+    DSLNNRF+ +  +   AV S+DDD++ PC +++ A+SVW++AP ++VGF PR+   D          +++GN          Y Y   +  VWW GRY+++L+K  F H+++LSLY + + S+  +Y  + RNCEDIAM F+V+N TG APP+WV+ K+ + G T GIS    H  +R+ CV R V E+GH+PL +T+ KAVD+R  W W
Sbjct:   29 LILGCFTVAMLFVLANRTPSYLGWDTDRSFAPESPGSTSRKG------YALLINTWKRNDLLKQSISHYTSCPGLDSIHIVWSEPDAPSDSLVKFLNLVIQSKANNGRQIELKFDINKEDSLNNRFKEIKDLKADAVFSIDDDIIFPCSSVELAYSVWRSAPDAMVGFVPRIHWID----------QSKGNV-------NQYMY-GGWWSVWWMGRYSMVLSKAAFFHKKYLSLYTNEMPSSIREYTTKNRNCEDIAMSFLVANATG-APPIWVKGKIYEIGST-GISSISGHTEKRTQCVNRFVAEYGHMPLVSTSVKAVDSRETWFW 331          
BLAST of NO02G01860 vs. NCBI_GenBank
Match: XP_010689910.1 (PREDICTED: glycosyltransferase family 64 protein C4 [Beta vulgaris subsp. vulgaris] >KMT18240.1 hypothetical protein BVRB_2g024070 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 224.2 bits (570), Expect = 6.700e-55
Identity = 111/283 (39.22%), Postives = 176/283 (62.19%), Query Frame = 0
Query:   86 YTIRVNSFRRNDMLKGFLQHFATCPNVEAIHVVWSDQENKPPSMA-----DWALPLTSDQLEKVQ--FEEQPTDSLNNRFRVLLPVPTPAVLSLDDDLVIPCGTLDFAFSVWQAAPHSLVGFTPRLITWDAGTSATAAEGETEGNEGGSGSLGGSYRYQSSFKYVWWHGRYNLILTKCCFLHREFLSLYFSSLSSATLDYIDQKRNCEDIAMQFVVSNHTGCAPPVWVQAKVTDHGQTSGISQGQDHANERSACVGRLVKEFGHLPLTTTAHKAVDARGKWLW 362
            YT+ +N+++RND+LK  + H+ATC  +++IH+VWS+ +  PPS +     + A+   S+   +++  F+    DSLNNRF+ +  + T  V S+DDD++ PC +++ AFSVW +AP ++VGF PR+   D           + GN         +Y     +  VWW G Y+++L+K  F H+++L++Y + + ++  +Y+ + RNCEDIAM F+V+N TG APPVWV+ K+ + G T GIS    H+ +RS CV R V EFG +PL +T+ KAVD+R  W W
Sbjct:   72 YTLLINTWKRNDLLKKSISHYATCLGLDSIHIVWSEPD--PPSKSLIHTLERAVRKNSNNGREIELKFDINKEDSLNNRFKEIKDLKTDVVFSIDDDVIFPCSSVELAFSVWLSAPETMVGFVPRMHWLD----------HSRGNR--------NYYAYGGWWSVWWMGTYSMVLSKAAFFHKKYLAMYTNEVPASLREYVARNRNCEDIAMSFLVANATG-APPVWVEGKIFEIGST-GISSLGGHSQKRSECVNRFVDEFGRMPLVSTSMKAVDSRNTWFW 332          
The following BLAST results are available for this feature:
BLAST of NO02G01860 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
XP_005856199.18.200e-13867.93glucuronyl/N-acetylglucosaminyl transferase EXT2 [... [more]
XP_006848148.12.900e-5841.20glycosyltransferase family 64 protein C4 [Amborell... [more]
XP_007009055.17.100e-5738.34PREDICTED: glycosyltransferase family 64 protein C... [more]
XP_021295661.12.700e-5637.73glycosyltransferase family 64 protein C4 [Herrania... [more]
PAN22470.17.900e-5640.83hypothetical protein PAHAL_D00065 [Panicum hallii][more]
PUZ59192.11.300e-5540.48hypothetical protein GQ55_4G021100 [Panicum hallii... [more]
XP_021904217.11.800e-5540.64glycosyltransferase family 64 protein C4 isoform X... [more]
XP_022871503.11.800e-5539.15glycosyltransferase family 64 protein C4-like isof... [more]
XP_017223298.13.000e-5536.17PREDICTED: glycosyltransferase family 64 protein C... [more]
XP_010689910.16.700e-5539.22PREDICTED: glycosyltransferase family 64 protein C... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL016nonsL016Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR032ncniR032Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR002ngnoR002Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR000ngnoR000Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK006814NSK006814Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO02G01860.1NO02G01860.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|574075gene_770Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100013g17gene191Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO02G01860.1NO02G01860.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO02G01860 ID=NO02G01860|Name=NO02G01860|organism=Nannochloropsis oceanica|type=gene|length=1086bp
ATGCGACGTCCTTACCATCGCGTTGGCCGCGGAACCCTTGACGGACTGGA
AAGCGGTGGCCGTATCGACCCAATTGATTTACCATTCTCATGGTGGCGGT
TGCGCGGCTGCTCTTCCCGGAGTTTCTACATGTTGTCGGCCGTGCTGATA
GTCGGTTGCCTAGTCCTGCACCTTACCCACCTTGCCCTCCAAACAGCCTT
TCAAGTTGAGCTCCTCCCCGCAACTTCACGCACCGGCGGAGTCTACGGCA
GCACGTACACCATTCGTGTCAATTCATTCAGGCGGAACGACATGCTTAAG
GGCTTTTTGCAGCATTTCGCCACATGCCCCAACGTCGAGGCCATTCATGT
GGTTTGGTCCGACCAAGAAAACAAACCCCCTTCCATGGCTGATTGGGCCC
TTCCCCTAACCTCCGACCAATTAGAAAAAGTCCAGTTCGAAGAACAGCCG
ACTGACAGCCTGAATAATCGCTTTCGTGTCTTGCTGCCGGTGCCCACCCC
TGCCGTGTTGTCCTTGGACGATGACCTGGTAATTCCTTGTGGCACACTTG
ACTTCGCATTTTCTGTCTGGCAAGCCGCCCCTCACTCCCTCGTGGGCTTC
ACTCCCCGACTTATCACCTGGGATGCTGGCACCAGTGCCACTGCTGCGGA
AGGAGAGACGGAGGGGAATGAGGGAGGGAGTGGATCACTGGGGGGGAGCT
ACAGATATCAAAGCTCGTTTAAGTACGTCTGGTGGCATGGCCGGTACAAC
CTGATCCTGACGAAATGCTGCTTTCTCCACCGGGAATTCCTTTCACTATA
TTTCTCCTCTCTGTCCTCGGCGACCTTGGATTATATCGACCAAAAACGAA
ATTGTGAAGACATAGCGATGCAGTTTGTTGTTTCCAACCACACGGGTTGC
GCGCCCCCTGTATGGGTTCAGGCGAAAGTCACGGACCATGGCCAAACGTC
GGGGATAAGTCAGGGGCAGGATCATGCGAATGAGAGAAGTGCGTGTGTTG
GGAGGTTGGTAAAGGAGTTTGGGCACTTGCCGTTGACGACCACGGCGCAT
AAGGCGGTGGATGCGAGGGGGAAGTGGCTGTGGTAG
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protein sequence of NO02G01860.1

>NO02G01860.1-protein ID=NO02G01860.1-protein|Name=NO02G01860.1|organism=Nannochloropsis oceanica|type=polypeptide|length=362bp
MRRPYHRVGRGTLDGLESGGRIDPIDLPFSWWRLRGCSSRSFYMLSAVLI
VGCLVLHLTHLALQTAFQVELLPATSRTGGVYGSTYTIRVNSFRRNDMLK
GFLQHFATCPNVEAIHVVWSDQENKPPSMADWALPLTSDQLEKVQFEEQP
TDSLNNRFRVLLPVPTPAVLSLDDDLVIPCGTLDFAFSVWQAAPHSLVGF
TPRLITWDAGTSATAAEGETEGNEGGSGSLGGSYRYQSSFKYVWWHGRYN
LILTKCCFLHREFLSLYFSSLSSATLDYIDQKRNCEDIAMQFVVSNHTGC
APPVWVQAKVTDHGQTSGISQGQDHANERSACVGRLVKEFGHLPLTTTAH
KAVDARGKWLW*
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Synonyms
Publications