NO02G01860, NO02G01860 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO02G01860 vs. NCBI_GenBank
Match: XP_005856199.1 (glucuronyl/N-acetylglucosaminyl transferase EXT2 [Nannochloropsis gaditana CCMP526] >EKU20149.1 glucuronyl/N-acetylglucosaminyl transferase EXT2 [Nannochloropsis gaditana CCMP526] >EWM30464.1 EXTL2, alpha-1,4-N-acetylhexosaminyltransferase [Nannochloropsis gaditana]) HSP 1 Score: 499.6 bits (1285), Expect = 8.200e-138 Identity = 250/368 (67.93%), Postives = 282/368 (76.63%), Query Frame = 0 Query: 1 MRRPYHRV-GRGTLDGLESGGRIDPIDLPFSWWRLRGCSSRSFYMLSAVLIVGCLVLHLTHLALQTAFQVELLPATSRTGGVYGSTYTIRVNSFRRNDMLKGFLQHFATCPNVEAIHVVWSDQENKPPSMADWALPLTSDQLEKVQFEEQPTDSLNNRFRVLLPVPTPAVLSLDDDLVIPCGTLDFAFSVWQAAPHSLVGFTPRLITWDAGTSATAAEG----ETEGNE--GGSGSLGGSYRYQSSFKYVWWHGRYNLILTKCCFLHREFLSLYFSSLSSATLDYIDQKRNCEDIAMQFVVSNHTGCAPPVWVQAKVTDHGQTSGISQGQDHANERSACVGRLVKEFGHLPLTTTAHKAVDARGKWLW 362 MRRP HRV G DGLE G R D R RG S++ Y L AV IVGCL+LHL+H ALQ F+V+ LP TS TGG +GSTYTIRVN+FRRNDMLK FL HFA CPNV+AI V+WSDQ PPS+ DWA+PL++ +L KV FE QPTDSLNNRFR LLPVPTPAVLSLDDDLVIPC TLDFA+S+WQAAP SLVGFTPRL+TWD T++ G E E E GSYRY SSFK+VWWHGRYN+ILTKCCFLHR+FLSLYFSSL+ L YID +RNCEDIAMQFVV+NHT APPVWVQA+ TD+GQ SGISQG+DHA ER ACVGRLVKEFG L LTTT+ KA+DAR W+W Sbjct: 1 MRRPNHRVAGWKPFDGLECGRRTDNNCFLSLASRFRGWSTKKCYYLFAVFIVGCLLLHLSHTALQMNFRVDFLPTTSPTGGPFGSTYTIRVNTFRRNDMLKRFLGHFARCPNVQAIQVIWSDQGYDPPSLMDWAIPLSTQELSKVAFEVQPTDSLNNRFRALLPVPTPAVLSLDDDLVIPCETLDFAYSIWQAAPQSLVGFTPRLVTWDGETASGVVAGKKVTELEAGEXXXXXXXXXGSYRYLSSFKHVWWHGRYNVILTKCCFLHRDFLSLYFSSLTPEVLQYIDDRRNCEDIAMQFVVANHTRGAPPVWVQARFTDYGQKSGISQGEDHARERGACVGRLVKEFGSLCLTTTSLKAIDARRSWIW 368
BLAST of NO02G01860 vs. NCBI_GenBank
Match: XP_006848148.1 (glycosyltransferase family 64 protein C4 [Amborella trichopoda] >ERN09729.1 hypothetical protein AMTR_s00029p00228900 [Amborella trichopoda]) HSP 1 Score: 235.3 bits (599), Expect = 2.900e-58 Identity = 117/284 (41.20%), Postives = 178/284 (62.68%), Query Frame = 0 Query: 83 GSTYTIRVNSFRRNDMLKGFLQHFATCPNVEAIHVVWSDQENKPPSMADW---ALPLTSDQLEKV--QFEEQPTDSLNNRFRVLLPVPTPAVLSLDDDLVIPCGTLDFAFSVWQAAPHSLVGFTPRLITWDAGTSATAAEGETEGNEGGSGSLGGSYRYQSSFKYVWWHGRYNLILTKCCFLHREFLSLYFSSLSSATLDYIDQKRNCEDIAMQFVVSNHTGCAPPVWVQAKVTDHGQTSGISQGQDHANERSACVGRLVKEFGHLPLTTTAHKAVDARGKWLW 362 G YTI +N+++RND+LK ++H+++C + +IH+VWS+ + S+ + L L S +V F+ DSLNNRF+V+ + T A+ S+DDD+V PC T++FA+SVWQ+AP ++VGF PR+ D +T+ +E Y + VWW G Y+++L+K F HR++L +Y + + ++ DY+ + RNCEDIAM F+V+N TG APP+WVQ K+ + G T GIS Q H+ RS CV R V E+GH+PL ++ KAVD+R +W W Sbjct: 66 GKGYTILINTWKRNDLLKQSVEHYSSCSGLHSIHIVWSEPDPPTDSLRGFLHHVLQLKSINGREVDLHFDINQEDSLNNRFKVIKDLETDAIFSIDDDVVFPCPTVEFAYSVWQSAPDTMVGFVPRMHWLD----------KTKEDE--------MYYAYGGWWSVWWMGTYSMVLSKAAFFHRKYLDMYTNQMPASIRDYVTRNRNCEDIAMSFLVANATG-APPIWVQGKIFEIGST-GISSLQGHSERRSQCVNRFVIEYGHMPLVESSVKAVDSRRRWFW 329
BLAST of NO02G01860 vs. NCBI_GenBank
Match: XP_007009055.1 (PREDICTED: glycosyltransferase family 64 protein C4 isoform X1 [Theobroma cacao] >EOY17865.1 Nucleotide-diphospho-sugar transferases superfamily protein isoform 1 [Theobroma cacao]) HSP 1 Score: 230.7 bits (587), Expect = 7.100e-57 Identity = 125/326 (38.34%), Postives = 195/326 (59.82%), Query Frame = 0 Query: 48 VLIVGCLVLHLTHLALQTAFQVELLPATSRTGGVYGST-----YTIRVNSFRRNDMLKGFLQHFATCPNVEAIHVVWSDQENKPPS-----MADWALPLTSDQLEKVQ--FEEQPTDSLNNRFRVLLPVPTPAVLSLDDDLVIPCGTLDFAFSVWQAAPHSLVGFTPRLITWDAGTSATAAEGETEGNEGGSGSLGGSYRYQSSFKYVWWHGRYNLILTKCCFLHREFLSLYFSSLSSATLDYIDQKRNCEDIAMQFVVSNHTGCAPPVWVQAKVTDHGQTSGISQGQDHANERSACVGRLVKEFGHLPLTTTAHKAVDARGKWLW 362 +L+ GC+ L L +A + + T ++ S+ Y I +N+++R D+LK + H+A+CP +E+IH+VWS+ + PPS + A+ L S +VQ F+ DSLNNRF+ + + T AV S+DDD++ PC +++FAF+VWQ+AP ++VG+ PR+ D E +G + +Y Y + VWW G Y++IL+K F H+++L LY + ++ +YI + RNCEDIAM F+V+N TG APP+WV+ K+ + G T GIS H++ R+ CV + V EFG +PL +T+ KAVD+R WLW Sbjct: 30 ILLCGCVALTLLAVANRNRDSSSFMRWTDDVDSLHSSSSSRGRYAIVMNTWKRYDLLKKSISHYASCPRLESIHLVWSEPD--PPSDSLKRFLNHAIQLNSGNGHRVQLVFDINKEDSLNNRFKEIRDLKTDAVFSIDDDVIFPCSSVEFAFTVWQSAPDTMVGYVPRMHWVD----------EKKGKD--------NYIY-GGWWSVWWTGTYSMILSKAAFFHKKYLKLYTDEMPASIKEYITRNRNCEDIAMSFLVANATG-APPIWVKGKIFEIGST-GISSLGGHSDRRTQCVNKFVAEFGRMPLVSTSMKAVDSRNVWLW 332
BLAST of NO02G01860 vs. NCBI_GenBank
Match: XP_021295661.1 (glycosyltransferase family 64 protein C4 [Herrania umbratica]) HSP 1 Score: 228.8 bits (582), Expect = 2.700e-56 Identity = 123/326 (37.73%), Postives = 195/326 (59.82%), Query Frame = 0 Query: 48 VLIVGCLVLHLTHLALQTAFQVELLPATSRTGGVYGST-----YTIRVNSFRRNDMLKGFLQHFATCPNVEAIHVVWSDQENKPPS-----MADWALPLTSDQLEKVQ--FEEQPTDSLNNRFRVLLPVPTPAVLSLDDDLVIPCGTLDFAFSVWQAAPHSLVGFTPRLITWDAGTSATAAEGETEGNEGGSGSLGGSYRYQSSFKYVWWHGRYNLILTKCCFLHREFLSLYFSSLSSATLDYIDQKRNCEDIAMQFVVSNHTGCAPPVWVQAKVTDHGQTSGISQGQDHANERSACVGRLVKEFGHLPLTTTAHKAVDARGKWLW 362 +L+ GC+ L L ++ + + T ++ S+ Y I +N+++R D+LK + H+A+CP +E+IH+VWS+ + PPS + + L + +V+ F+ DSLNNRF+ + + T AV S+DDD++ PC +++FAF+VWQ+AP ++VG+ PR+ D ET+G + +Y Y + VWW G Y++IL+K F H+++L LY + ++ +YI + RNCEDIAM F+V+N TG APP+WV+ K+ + G T GIS H+N R+ CV + V EFG +PL +T+ KAVD+R WLW Sbjct: 30 ILLCGCVALTLLAVSNRNRDSSSFMGWTGDGDSLHSSSSPRGRYAIVMNTWKRYDLLKKSISHYASCPRLESIHIVWSEPD--PPSDSLKRFLNHVVQLNTRNGRRVELVFDINKEDSLNNRFKEIKDLKTDAVFSIDDDVIFPCSSVEFAFTVWQSAPDTMVGYVPRMHWVD----------ETKGKD--------NYIY-GGWWSVWWTGSYSMILSKAAFFHKKYLKLYTDEMPASIKEYITRNRNCEDIAMSFLVANATG-APPIWVKGKIFEIGST-GISSLGGHSNRRTQCVNKFVAEFGRMPLISTSMKAVDSRNVWLW 332
BLAST of NO02G01860 vs. NCBI_GenBank
Match: PAN22470.1 (hypothetical protein PAHAL_D00065 [Panicum hallii]) HSP 1 Score: 227.3 bits (578), Expect = 7.900e-56 Identity = 118/289 (40.83%), Postives = 171/289 (59.17%), Query Frame = 0 Query: 73 PATSRTGGVYGSTYTIRVNSFRRNDMLKGFLQHFATCPNVEAIHVVWSDQENKPPSMADWALPLTSDQLEKVQFEEQPTDSLNNRFRVLLPVPTPAVLSLDDDLVIPCGTLDFAFSVWQAAPHSLVGFTPRLITWDAGTSATAAEGETEGNEGGSGSLGGSYRYQSSFKYVWWHGRYNLILTKCCFLHREFLSLYFSSLSSATLDYIDQKRNCEDIAMQFVVSNHTGCAPPVWVQAKVTDHGQTSGISQGQDHANERSACVGRLVKEFGHLPLTTTAHKAVDARGKWLW 362 PA G G +++ +N++RR+ +L+ + H+A C VEA+HVVWS + PP + + + V+FE DSLNNRFR + + T AV S+DDDL+IPC TL FAF VWQ+AP ++VGF PR+ W A + E YRY S+ VWW G Y+++L+K F HR++L LY + + + +Y+++ RNCEDIAM F+V+N TG APP+WVQ ++ + G + GIS + H +RS C+ +GH+PL T KAVD+R W W Sbjct: 82 PAAGPGGSPRG--FSVVINTWRRHALLRRSVAHYAACAGVEAVHVVWS-EPRPPPEPLRRGVLINGTRRGTVRFEINEADSLNNRFRPIRGLATDAVFSVDDDLIIPCSTLRFAFDVWQSAPSAMVGFVPRM-HWLADPRGSTKE----------------YRY-GSWWSVWWTGTYSMVLSKASFFHRQYLDLYTNQMLPSIRNYVNENRNCEDIAMSFLVANATG-APPIWVQGRIFEIG-SGGISSLKGHGLQRSRCLNTFAAMYGHMPLVVTTVKAVDSRRSWFW 347
BLAST of NO02G01860 vs. NCBI_GenBank
Match: PUZ59192.1 (hypothetical protein GQ55_4G021100 [Panicum hallii var. hallii]) HSP 1 Score: 226.5 bits (576), Expect = 1.300e-55 Identity = 117/289 (40.48%), Postives = 170/289 (58.82%), Query Frame = 0 Query: 73 PATSRTGGVYGSTYTIRVNSFRRNDMLKGFLQHFATCPNVEAIHVVWSDQENKPPSMADWALPLTSDQLEKVQFEEQPTDSLNNRFRVLLPVPTPAVLSLDDDLVIPCGTLDFAFSVWQAAPHSLVGFTPRLITWDAGTSATAAEGETEGNEGGSGSLGGSYRYQSSFKYVWWHGRYNLILTKCCFLHREFLSLYFSSLSSATLDYIDQKRNCEDIAMQFVVSNHTGCAPPVWVQAKVTDHGQTSGISQGQDHANERSACVGRLVKEFGHLPLTTTAHKAVDARGKWLW 362 PA G G +++ +N++RR+ +L+ + H+A C VEA+HVVWS + PP + + + V+FE DSLNNRFR + + T AV S+DDDL++PC TL FAF VWQ+AP ++VGF PR+ W A + E YRY S+ VWW G Y+++L+K F HR++L LY + + + +Y+++ RNCEDIAM F+V+N TG APP+WVQ ++ + G GIS + H +RS C+ +GH+PL T KAVD+R W W Sbjct: 82 PAAGPGGSPRG--FSVVINTWRRHALLRRSVAHYAACAGVEAVHVVWS-EPRPPPEPLRRGVLINGTRRGTVRFEINEADSLNNRFRPIRGLATDAVFSVDDDLIVPCSTLRFAFDVWQSAPSAMVGFVPRM-HWLADPRGSTKE----------------YRY-GSWWSVWWTGTYSMVLSKASFFHRQYLDLYTNQMLPSIRNYVNENRNCEDIAMSFLVANATG-APPIWVQGRIFEIG-VGGISSLKGHGLQRSRCLNTFAAMYGHMPLVVTTVKAVDSRTSWFW 347
BLAST of NO02G01860 vs. NCBI_GenBank
Match: XP_021904217.1 (glycosyltransferase family 64 protein C4 isoform X1 [Carica papaya]) HSP 1 Score: 226.1 bits (575), Expect = 1.800e-55 Identity = 115/283 (40.64%), Postives = 175/283 (61.84%), Query Frame = 0 Query: 86 YTIRVNSFRRNDMLKGFLQHFATCPNVEAIHVVWSDQENKPPS-----MADWALPLTSDQLEKV--QFEEQPTDSLNNRFRVLLPVPTPAVLSLDDDLVIPCGTLDFAFSVWQAAPHSLVGFTPRLITWDAGTSATAAEGETEGNEGGSGSLGGSYRYQSSFKYVWWHGRYNLILTKCCFLHREFLSLYFSSLSSATLDYIDQKRNCEDIAMQFVVSNHTGCAPPVWVQAKVTDHGQTSGISQGQDHANERSACVGRLVKEFGHLPLTTTAHKAVDARGKWLW 362 YTI +N+++R D+LK + H+++C +E+IH+VWS E PPS + A L S +K+ +F+ DSLNNRF+ + + T +V S+DDD++ PC T++ AF VWQ+AP ++VGF PR+ D +++GN G + + VWW G Y+++L+K F HR++LSLY + + ++ +Y+ + RNCEDIAM F+V+N TG APP+WV+ K+ + G T GIS H +R+ CV R V EFG +PL +T+ KAVD+R W W Sbjct: 70 YTILMNTWKRYDLLKQSISHYSSCGRLESIHIVWS--EPNPPSDSLKEFLNHAAQLNSRGRQKIDLRFDINEEDSLNNRFKEIKDLKTDSVFSIDDDIIFPCSTVELAFDVWQSAPDAMVGFVPRIHWVD----------KSKGN--------GEHFIYGGWWSVWWTGTYSMVLSKAAFFHRKYLSLYTNEMPASIKEYVSRNRNCEDIAMSFLVANATG-APPIWVKGKIFEIGST-GISSLGGHNEKRTQCVNRFVDEFGRMPLVSTSVKAVDSRSAWFW 330
BLAST of NO02G01860 vs. NCBI_GenBank
Match: XP_022871503.1 (glycosyltransferase family 64 protein C4-like isoform X1 [Olea europaea var. sylvestris]) HSP 1 Score: 226.1 bits (575), Expect = 1.800e-55 Identity = 110/281 (39.15%), Postives = 174/281 (61.92%), Query Frame = 0 Query: 86 YTIRVNSFRRNDMLKGFLQHFATCPNVEAIHVVWSDQENKPPSMADWALPLTSDQLE-----KVQFEEQPTDSLNNRFRVLLPVPTPAVLSLDDDLVIPCGTLDFAFSVWQAAPHSLVGFTPRLITWDAGTSATAAEGETEGNEGGSGSLGGSYRYQSSFKYVWWHGRYNLILTKCCFLHREFLSLYFSSLSSATLDYIDQKRNCEDIAMQFVVSNHTGCAPPVWVQAKVTDHGQTSGISQGQDHANERSACVGRLVKEFGHLPLTTTAHKAVDARGKWLW 362 Y + +N+++RND+LK + H+A+CP + +IH+VWS+ + S+ + + + +++F+ DSLNNRF+ + T AV S+DDD++ PC T++FAF+VW A ++VGF PRL WD ++GN G+Y Y+ + VWW G Y+++L+K F H+++L+LY S+ S+ +Y+ + RNCEDIAM F+V+N TG APP+WV+ K+ + G T GIS HA +RS CV + E+G +PL +T+ KA+D+R W W Sbjct: 66 YALLINTWKRNDLLKQSISHYASCPGLGSIHIVWSEPDPPSDSLIKFLNHVIQSDFKDGREIELKFDINKEDSLNNRFKEIKDFKTDAVFSIDDDIIFPCTTVEFAFNVWHTAQDTMVGFVPRL-HWD---------DRSKGNR-------GNYMYRGWWS-VWWTGTYSMVLSKAAFFHKKYLNLYTYSMPSSIREYVTKNRNCEDIAMSFLVANATG-APPIWVKGKIFEIGST-GISSLGGHAEKRSHCVNKFAAEYGRMPLVSTSVKAMDSRNSWFW 326
BLAST of NO02G01860 vs. NCBI_GenBank
Match: XP_017223298.1 (PREDICTED: glycosyltransferase family 64 protein C4-like [Daucus carota subsp. sativus]) HSP 1 Score: 225.3 bits (573), Expect = 3.000e-55 Identity = 119/329 (36.17%), Postives = 193/329 (58.66%), Query Frame = 0 Query: 49 LIVGCLVLHL---------THLALQT--AFQVELLPATSRTGGVYGSTYTIRVNSFRRNDMLKGFLQHFATCPNVEAIHVVWSDQENKPPSMADWALPLTSDQLE-----KVQFEEQPTDSLNNRFRVLLPVPTPAVLSLDDDLVIPCGTLDFAFSVWQAAPHSLVGFTPRLITWDAGTSATAAEGETEGNEGGSGSLGGSYRYQSSFKYVWWHGRYNLILTKCCFLHREFLSLYFSSLSSATLDYIDQKRNCEDIAMQFVVSNHTGCAPPVWVQAKVTDHGQTSGISQGQDHANERSACVGRLVKEFGHLPLTTTAHKAVDARGKWLW 362 LI+GC + + ++L T +F E +TSR G Y + +N+++RND+LK + H+ +CP +++IH+VWS+ + S+ + + + +++F+ DSLNNRF+ + + AV S+DDD++ PC +++ A+SVW++AP ++VGF PR+ D +++GN Y Y + VWW GRY+++L+K F H+++LSLY + + S+ +Y + RNCEDIAM F+V+N TG APP+WV+ K+ + G T GIS H +R+ CV R V E+GH+PL +T+ KAVD+R W W Sbjct: 29 LILGCFTVAMLFVLANRTPSYLGWDTDRSFAPESPGSTSRKG------YALLINTWKRNDLLKQSISHYTSCPGLDSIHIVWSEPDAPSDSLVKFLNLVIQSKANNGRQIELKFDINKEDSLNNRFKEIKDLKADAVFSIDDDIIFPCSSVELAYSVWRSAPDAMVGFVPRIHWID----------QSKGNV-------NQYMY-GGWWSVWWMGRYSMVLSKAAFFHKKYLSLYTNEMPSSIREYTTKNRNCEDIAMSFLVANATG-APPIWVKGKIYEIGST-GISSISGHTEKRTQCVNRFVAEYGHMPLVSTSVKAVDSRETWFW 331
BLAST of NO02G01860 vs. NCBI_GenBank
Match: XP_010689910.1 (PREDICTED: glycosyltransferase family 64 protein C4 [Beta vulgaris subsp. vulgaris] >KMT18240.1 hypothetical protein BVRB_2g024070 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 224.2 bits (570), Expect = 6.700e-55 Identity = 111/283 (39.22%), Postives = 176/283 (62.19%), Query Frame = 0 Query: 86 YTIRVNSFRRNDMLKGFLQHFATCPNVEAIHVVWSDQENKPPSMA-----DWALPLTSDQLEKVQ--FEEQPTDSLNNRFRVLLPVPTPAVLSLDDDLVIPCGTLDFAFSVWQAAPHSLVGFTPRLITWDAGTSATAAEGETEGNEGGSGSLGGSYRYQSSFKYVWWHGRYNLILTKCCFLHREFLSLYFSSLSSATLDYIDQKRNCEDIAMQFVVSNHTGCAPPVWVQAKVTDHGQTSGISQGQDHANERSACVGRLVKEFGHLPLTTTAHKAVDARGKWLW 362 YT+ +N+++RND+LK + H+ATC +++IH+VWS+ + PPS + + A+ S+ +++ F+ DSLNNRF+ + + T V S+DDD++ PC +++ AFSVW +AP ++VGF PR+ D + GN +Y + VWW G Y+++L+K F H+++L++Y + + ++ +Y+ + RNCEDIAM F+V+N TG APPVWV+ K+ + G T GIS H+ +RS CV R V EFG +PL +T+ KAVD+R W W Sbjct: 72 YTLLINTWKRNDLLKKSISHYATCLGLDSIHIVWSEPD--PPSKSLIHTLERAVRKNSNNGREIELKFDINKEDSLNNRFKEIKDLKTDVVFSIDDDVIFPCSSVELAFSVWLSAPETMVGFVPRMHWLD----------HSRGNR--------NYYAYGGWWSVWWMGTYSMVLSKAAFFHKKYLAMYTNEVPASLREYVARNRNCEDIAMSFLVANATG-APPVWVEGKIFEIGST-GISSLGGHSQKRSECVNRFVDEFGRMPLVSTSMKAVDSRNTWFW 332 The following BLAST results are available for this feature:
BLAST of NO02G01860 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO02G01860 ID=NO02G01860|Name=NO02G01860|organism=Nannochloropsis oceanica|type=gene|length=1086bpback to top protein sequence of NO02G01860.1 >NO02G01860.1-protein ID=NO02G01860.1-protein|Name=NO02G01860.1|organism=Nannochloropsis oceanica|type=polypeptide|length=362bpback to top Synonyms
Publications
|