NO02G01760, NO02G01760 (gene) Nannochloropsis oceanica

Overview
NameNO02G01760
Unique NameNO02G01760
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2136
Alignment locationchr2:516709..518844 +

Link to JBrowse

Properties
Property NameValue
DescriptionCytosolic Fe-S cluster assembly factor NUBP1 homolog
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr2genomechr2:516709..518844 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0160542021-01-14
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase
IPR019591Mrp/NBP35_ATP-bd
IPR033756YlxH/NBP35
Vocabulary: Biological Process
TermDefinition
GO:0016043cellular component organization
GO:0009058biosynthetic process
Vocabulary: Cellular Component
TermDefinition
GO:0005737cytoplasm
Vocabulary: Molecular Function
TermDefinition
GO:0000166nucleotide binding
Homology
BLAST of NO02G01760 vs. NCBI_GenBank
Match: EWM30507.1 (nucleotide-binding protein 1 [Nannochloropsis gaditana])

HSP 1 Score: 594.0 bits (1530), Expect = 3.500e-166
Identity = 299/377 (79.31%), Postives = 329/377 (87.27%), Query Frame = 0
Query:    4 SETSTSTAPPPADANEGCVGPTSEHAGKANACAGCPNQKVCASGEAKRVDPALAVVQDKLAQVKHKLVVLSGKGGVGKTTFACQLAFSLAQQHGLQVGLLDVDICGPSVPRVMGLNGQEVHQSAAGWSPVYVDDNLGVMSIGFMLPNQDDAVIWRGPRKNGLIKQFLTDVDWGELDYLIIDTPPGTSDEHLSIVQYLKQGCGVDGAVVVTTPQEVAMMDVRKELNFCKKTGLRVIGVVENMSGLTVPLKALRFWGGPLTASTDDVSG-QDTSR----NKPVVAAVAREDKTAAVLKALRQIDHSLLDCLVEADVFPAFGSGPQGMAAAFDVPFLGKLPLDPDLLRACEEGVSLAEKAPESSAVLALENIVRGVLDGT 376
            S  + S AP P DANEGCVGPTSE AGKA+ CAGCPNQKVCASGE ++ DPAL +VQDKLAQVKHKLVVLSGKGGVGKTTFACQLAF LAQQ+GLQVGLLDVDICGPSVPRVMGL GQEVHQSAAGWSPVYVDDNLGVMSIGFMLPN DDAVIWRGPRKNGLIKQFLTDVDWGELDYLIIDTPPGTSDEHLSI+QYLK GCG+DGAVVVTTPQEVAM DVRKELNFCKKTGL+V+GVVENMSGL VPL AL F   P+   + + +G ++T +    +KPV+     +DKTA VL+ALR++D SLLDC+V+A+VFPAFGSGPQGMAAAF+VPFLGKLPLDPDLLRACEEGVSL EKAP+S AV AL  IVR ++  T
Sbjct:    6 SSGARSQAPVPPDANEGCVGPTSEEAGKASTCAGCPNQKVCASGEPRQPDPALVIVQDKLAQVKHKLVVLSGKGGVGKTTFACQLAFCLAQQYGLQVGLLDVDICGPSVPRVMGLTGQEVHQSAAGWSPVYVDDNLGVMSIGFMLPNADDAVIWRGPRKNGLIKQFLTDVDWGELDYLIIDTPPGTSDEHLSIIQYLKDGCGIDGAVVVTTPQEVAMADVRKELNFCKKTGLQVVGVVENMSGLNVPLTALNFLEKPVARHSGNGAGIEETDKSMETDKPVI-----KDKTAEVLEALRKVDPSLLDCVVQAEVFPAFGSGPQGMAAAFEVPFLGKLPLDPDLLRACEEGVSLEEKAPQSPAVPALHTIVRSIVAAT 377          
BLAST of NO02G01760 vs. NCBI_GenBank
Match: OWZ16556.1 (Nucleotide-binding protein 1 [Phytophthora megakarya])

HSP 1 Score: 441.0 bits (1133), Expect = 3.800e-120
Identity = 228/368 (61.96%), Postives = 274/368 (74.46%), Query Frame = 0
Query:   11 APPPADANEGCVGPTSEHAGKANACAGCPNQKVCASGEAKRVDPALAVVQDKLAQVKHKLVVLSGKGGVGKTTFACQLAFSLAQQHGLQVGLLDVDICGPSVPRVMGLNGQEVHQSAAGWSPVYVDDNLGVMSIGFMLPNQDDAVIWRGPRKNGLIKQFLTDVDWGELDYLIIDTPPGTSDEHLSIVQYLKQGCGVDGAVVVTTPQEVAMMDVRKELNFCKKTGLRVIGVVENMSGLTVPLKALRFWGGPLTASTDDVSGQDTSRNKPVVAAVAREDKTAAVLKALRQIDHSLLDCLVEADVFPAFGSGPQGMAAAFDVPFLGKLPLDPDLLRACEEGVSLAEKAPESSAVLALENIVRGVLDGTRLE 379
            A  P++ANE CVGP SE AGKA+ CAGCPNQ +CASG A++ DPA++ V+ +LA VKHKL+VLSGKGGVGK+T ACQLAF+LA Q G QVGLLDVDI GPSVPR++GL GQEVHQSAAGWSPVYVDDNLGVMSIGFMLP+ DDA+IWRGP+K+G+IKQFL DV WGELDYLIIDTPPGTSDEH+SIVQY+K+   +DGAVVVTTPQEVA+ DVRKELNFC+KT + V+GVVENMSG+  PL  ++F G                           ED+TA  +K L++    LL   V+ +VFPA   G + MA  F+VPFLG+LPLD  +  ACEEGVS  E+ P+S A  A   IVRG+++    E
Sbjct:    2 ATAPSNANEECVGPQSEQAGKADGCAGCPNQSLCASGAARQPDPAVSDVKQRLAGVKHKLLVLSGKGGVGKSTVACQLAFALAGQ-GYQVGLLDVDITGPSVPRMLGLLGQEVHQSAAGWSPVYVDDNLGVMSIGFMLPDADDAIIWRGPKKSGIIKQFLVDVQWGELDYLIIDTPPGTSDEHISIVQYMKE-ADLDGAVVVTTPQEVALSDVRKELNFCRKTNINVLGVVENMSGVQRPLSDVKFVGAD------------------------GEDQTAKFMKLLQEKAPELLQHSVQMEVFPASNGGGEAMAKRFNVPFLGRLPLDNKMTGACEEGVSFLEEYPDSVAAPAFSKIVRGMVNARMSE 343          
BLAST of NO02G01760 vs. NCBI_GenBank
Match: XP_009538480.1 (hypothetical protein PHYSODRAFT_531325 [Phytophthora sojae] >EGZ06583.1 hypothetical protein PHYSODRAFT_531325 [Phytophthora sojae])

HSP 1 Score: 440.3 bits (1131), Expect = 6.500e-120
Identity = 226/357 (63.31%), Postives = 270/357 (75.63%), Query Frame = 0
Query:   14 PADANEGCVGPTSEHAGKANACAGCPNQKVCASGEAKRVDPALAVVQDKLAQVKHKLVVLSGKGGVGKTTFACQLAFSLAQQHGLQVGLLDVDICGPSVPRVMGLNGQEVHQSAAGWSPVYVDDNLGVMSIGFMLPNQDDAVIWRGPRKNGLIKQFLTDVDWGELDYLIIDTPPGTSDEHLSIVQYLKQGCGVDGAVVVTTPQEVAMMDVRKELNFCKKTGLRVIGVVENMSGLTVPLKALRFWGGPLTASTDDVSGQDTSRNKPVVAAVAREDKTAAVLKALRQIDHSLLDCLVEADVFPAFGSGPQGMAAAFDVPFLGKLPLDPDLLRACEEGVSLAEKAPESSAVLALENIVRG 371
            PA+ANE CVGP SE AGKA+ CAGCPNQ +CASG A++ DPA++ V+ +LA VKHKL+VLSGKGGVGK+T ACQLAF+LA + G QVGLLDVDI GPSVPR++GL GQEVHQSAAGWSPVYVDDNLGVMSIGFMLPN DDA+IWRGP+K+G+IKQFL DV WGELDYLIIDTPPGTSDEH+SIVQY+K+   +DGAVVVTTPQEVA+ DVRKELNFC+KT + V+GVVENMSG+  PL  ++F G                           +D+TAA +K L++    LL   V+ +VFPA   G + MA  F+VPFLG+LPLD  +  ACEEGVS  E+ P+S A  A   IV+G
Sbjct:    4 PANANEQCVGPQSEQAGKADGCAGCPNQSLCASGAARQPDPAVSDVRQRLAGVKHKLLVLSGKGGVGKSTVACQLAFALAGR-GFQVGLLDVDITGPSVPRMLGLLGQEVHQSAAGWSPVYVDDNLGVMSIGFMLPNADDAIIWRGPKKSGIIKQFLVDVQWGELDYLIIDTPPGTSDEHISIVQYMKE-ADLDGAVVVTTPQEVALSDVRKELNFCRKTNINVLGVVENMSGVQRPLSDVKFVGAD------------------------GDDQTAAFMKLLQEKAPELLQHSVQMEVFPAASGGGEAMAKKFNVPFLGRLPLDNKMTGACEEGVSFLEEYPDSVAAPAFSKIVQG 334          
BLAST of NO02G01760 vs. NCBI_GenBank
Match: ETI44167.1 (hypothetical protein F443_11104 [Phytophthora parasitica P1569])

HSP 1 Score: 435.6 bits (1119), Expect = 1.600e-118
Identity = 225/359 (62.67%), Postives = 270/359 (75.21%), Query Frame = 0
Query:   14 PADANEGCVGPTSEHAGKANACAGCPNQKVCASGEAKRVDPALAVVQDKLAQVKHKLVVLSGKGGVGKTTFACQLAFSLAQQHGLQVGLLDVDICGPSVPRVMGLNGQEVHQSAAGWSPVYVDDNLGVMSIGFMLPNQDDAVIWRGPRKNGLIKQFLTDVDWGELDYLIIDTPPGTSDEHLSIVQYLKQGCGVDGAVVVTTPQEVAMMDVRKELNFCKKTGLRVIGVVENMSGLTVPLKALRFWGGPLTASTDDVSGQDTSRNKPVVAAVAREDKTAAVLKALRQIDHSLLDCLVEADVFPAFGSGPQGMAAAFDVPFLGKLPLDPDLLRACEEGVSLAEKAPESSAVLALENIVRGVL 373
            PA+ANE CVGP SE AGKA+ CAGCPNQ +CASG A++ DPA++ V+ +LA VKHKL+VLSGKGGVGK+T ACQLAF+LA + G QVGLLDVDI GPSVPR++GL GQEVHQSAAGWSPVYVDDNLGVMSIGFMLPN DDA+IWRGP+K+G+IKQFL DV WGELDYLIIDTPPGTSDEH+SIVQY+K+   +DGAVVVTTPQEVA+ DVRKELNFC+KT + V+GVVENMSG+  PL  ++F G                            D+TAA +K L++    LL   V+ +VFPA   G + MA  F+VPFLG+LPLD  +  ACEEGVS  E+ P+S A  A   IV+ ++
Sbjct:    6 PANANEECVGPQSEQAGKADGCAGCPNQNLCASGAARQPDPAVSDVKQRLAGVKHKLLVLSGKGGVGKSTVACQLAFALAGK-GFQVGLLDVDITGPSVPRMLGLVGQEVHQSAAGWSPVYVDDNLGVMSIGFMLPNADDAIIWRGPKKSGIIKQFLVDVQWGELDYLIIDTPPGTSDEHISIVQYMKE-ADLDGAVVVTTPQEVALSDVRKELNFCRKTNINVLGVVENMSGVQRPLSDVKFVGAD------------------------GNDQTAAFMKLLQEKAPELLTHSVQMEVFPASTGGGEAMAKKFNVPFLGRLPLDNKMTGACEEGVSFLEEYPDSVAAPAFGKIVQDLV 338          
BLAST of NO02G01760 vs. NCBI_GenBank
Match: XP_008907079.1 (hypothetical protein PPTG_13103 [Phytophthora parasitica INRA-310] >ETK84176.1 hypothetical protein L915_10823 [Phytophthora parasitica] >ETL37613.1 hypothetical protein L916_10716 [Phytophthora parasitica] >ETL90759.1 hypothetical protein L917_10620 [Phytophthora parasitica] >ETM44053.1 hypothetical protein L914_10665 [Phytophthora parasitica] >ETN07794.1 hypothetical protein PPTG_13103 [Phytophthora parasitica INRA-310] >ETO72816.1 hypothetical protein F444_11177 [Phytophthora parasitica P1976] >ETP13991.1 hypothetical protein F441_11015 [Phytophthora parasitica CJ01A1] >ETP42040.1 hypothetical protein F442_11008 [Phytophthora parasitica P10297] >KUF78350.1 Cytosolic Fe-S cluster assembly factor nubp1 [Phytophthora nicotianae] >KUF97552.1 Pre-B-cell leukemia transcription factor 1 [Phytophthora nicotianae])

HSP 1 Score: 435.6 bits (1119), Expect = 1.600e-118
Identity = 225/359 (62.67%), Postives = 270/359 (75.21%), Query Frame = 0
Query:   14 PADANEGCVGPTSEHAGKANACAGCPNQKVCASGEAKRVDPALAVVQDKLAQVKHKLVVLSGKGGVGKTTFACQLAFSLAQQHGLQVGLLDVDICGPSVPRVMGLNGQEVHQSAAGWSPVYVDDNLGVMSIGFMLPNQDDAVIWRGPRKNGLIKQFLTDVDWGELDYLIIDTPPGTSDEHLSIVQYLKQGCGVDGAVVVTTPQEVAMMDVRKELNFCKKTGLRVIGVVENMSGLTVPLKALRFWGGPLTASTDDVSGQDTSRNKPVVAAVAREDKTAAVLKALRQIDHSLLDCLVEADVFPAFGSGPQGMAAAFDVPFLGKLPLDPDLLRACEEGVSLAEKAPESSAVLALENIVRGVL 373
            PA+ANE CVGP SE AGKA+ CAGCPNQ +CASG A++ DPA++ V+ +LA VKHKL+VLSGKGGVGK+T ACQLAF+LA + G QVGLLDVDI GPSVPR++GL GQEVHQSAAGWSPVYVDDNLGVMSIGFMLPN DDA+IWRGP+K+G+IKQFL DV WGELDYLIIDTPPGTSDEH+SIVQY+K+   +DGAVVVTTPQEVA+ DVRKELNFC+KT + V+GVVENMSG+  PL  ++F G                            D+TAA +K L++    LL   V+ +VFPA   G + MA  F+VPFLG+LPLD  +  ACEEGVS  E+ P+S A  A   IV+ ++
Sbjct:    6 PANANEECVGPQSEQAGKADGCAGCPNQSLCASGAARQPDPAVSDVKQRLAGVKHKLLVLSGKGGVGKSTVACQLAFALAGK-GFQVGLLDVDITGPSVPRMLGLVGQEVHQSAAGWSPVYVDDNLGVMSIGFMLPNADDAIIWRGPKKSGIIKQFLVDVQWGELDYLIIDTPPGTSDEHISIVQYMKE-ADLDGAVVVTTPQEVALSDVRKELNFCRKTNINVLGVVENMSGVQRPLSDVKFVGAD------------------------GNDQTAAFMKLLQEKAPELLTHSVQMEVFPASTGGGEAMAKKFNVPFLGRLPLDNKMTGACEEGVSFLEEYPDSVAAPAFGKIVQDLV 338          
BLAST of NO02G01760 vs. NCBI_GenBank
Match: CBN75570.1 (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 430.3 bits (1105), Expect = 6.700e-117
Identity = 219/362 (60.50%), Postives = 267/362 (73.76%), Query Frame = 0
Query:   14 PADANEGCVGPTSEHAGKANACAGCPNQKVCASGEAKRVDPALAVVQDKLAQVKHKLVVLSGKGGVGKTTFACQLAFSLAQQHGLQVGLLDVDICGPSVPRVMGLNGQEVHQSAAGWSPVYVDDNLGVMSIGFMLPNQDDAVIWRGPRKNGLIKQFLTDVDWGELDYLIIDTPPGTSDEHLSIVQYLKQGCGVDGAVVVTTPQEVAMMDVRKELNFCKKTGLRVIGVVENMSGLTVPLKALRFWGGPLTASTDDVSGQDTSRNKPVVAAVAREDKTAAVLKALRQIDHSLLDCLVEADVFPAFGSGPQGMAAAFDVPFLGKLPLDPDLLRACEEGVSLAEKAPESSAVLALENIVRGVLDGT 376
            P++ANEGCVGP +E AG        PN+  CASG+ + VDPA+A V ++L+ VKH ++VLSGKGGVGK+T +CQLAFSLA Q G QVGLLD+DICGPSVPR++GL G+EVHQS++GWSPV+V D LGVMSIGFMLP QD+AVIWRGP+KNGLIKQFLTDVDWG+LDYL+IDTPPGTSDEH+S+V+YL  GC VDGAVVVTTPQEVAM DVRKEL+FC+KTGL V+GVVENMSGLTVP+  L F         D  +G               EDKT +    LR+    LL+ + +  VF +FG GP+GMA ++ VPFLG +P+DP+LL+ACEEG +      ES A      IV  V+D T
Sbjct:   54 PSNANEGCVGPAAEEAGXXXXXXXXPNKTACASGKGREVDPAVAEVAERLSSVKHVVLVLSGKGGVGKSTVSCQLAFSLAAQ-GKQVGLLDIDICGPSVPRMLGLTGREVHQSSSGWSPVWVTDGLGVMSIGFMLPQQDNAVIWRGPKKNGLIKQFLTDVDWGQLDYLVIDTPPGTSDEHMSVVKYL-GGCIVDGAVVVTTPQEVAMADVRKELSFCRKTGLNVLGVVENMSGLTVPVSELLF--------VDRATG---------------EDKTESARAILREKAPELLELMAQTTVFTSFGKGPRGMAESYGVPFLGSIPMDPNLLKACEEGEAFTTMYAESPAAKPFVKIVGAVVDAT 390          
BLAST of NO02G01760 vs. NCBI_GenBank
Match: XP_009839707.1 (hypothetical protein H257_13758 [Aphanomyces astaci] >ETV70642.1 hypothetical protein H257_13758 [Aphanomyces astaci])

HSP 1 Score: 430.3 bits (1105), Expect = 6.700e-117
Identity = 226/364 (62.09%), Postives = 260/364 (71.43%), Query Frame = 0
Query:    9 STAPPPADANEGCVGPTSEHAGKANACAGCPNQKVCASGEAKRVDPALAVVQDKLAQVKHKLVVLSGKGGVGKTTFACQLAFSLAQQHGLQVGLLDVDICGPSVPRVMGLNGQEVHQSAAGWSPVYVDDNLGVMSIGFMLPNQDDAVIWRGPRKNGLIKQFLTDVDWGELDYLIIDTPPGTSDEHLSIVQYLKQGCGVDGAVVVTTPQEVAMMDVRKELNFCKKTGLRVIGVVENMSGLTVPLKALRFWGGPLTASTDDVSGQDTSRNKPVVAAVAREDKTAAVLKALRQIDHSLLDCLVEADVFPAFGSGPQGMAAAFDVPFLGKLPLDPDLLRACEEGVSLAEKAPESSAVLALENIVRGVL 373
            +T   P DAN+GCVG  S+ AGKA+ CAGCPNQ +CASG  K  DP +A V+D L++VKHK++VLSGKGGVGK+T +CQLAF LAQ+ G QVGLLDVDI GPSVPR++GL GQEVHQS  GWSPVYVDDNLGVMSIGFMLPN DDA+IWRGP+K+GLIKQFLTDV WG+LDYLIIDTPPGTSDEH+SIVQYLK    +DGAVVVTTPQEVAM DVRKELNFCKKT + ++GVVENM+GL   L    F                       V  V   D+T  VL  LR     LL   V   VFP    G + MA AF+VPFLG+LPLD  L +ACEEGVS  E  P SSA  A + I+  V+
Sbjct:  418 ATMDKPTDANQGCVGTQSDEAGKASGCAGCPNQSLCASGATKLPDPTVATVKDHLSRVKHKILVLSGKGGVGKSTISCQLAFGLAQK-GFQVGLLDVDITGPSVPRMLGLQGQEVHQSNEGWSPVYVDDNLGVMSIGFMLPNADDAIIWRGPKKSGLIKQFLTDVHWGDLDYLIIDTPPGTSDEHISIVQYLKD-AQIDGAVVVTTPQEVAMADVRKELNFCKKTNVPILGVVENMAGLQQHLARCNF-----------------------VDPVTSVDQTQHVLDVLRAKAPELLSLAVHLQVFPPAAGGGEAMAHAFNVPFLGRLPLDQKLTQACEEGVSFLEAYPTSSAASAFKQILDQVV 756          
BLAST of NO02G01760 vs. NCBI_GenBank
Match: OQR86831.1 (nucleotide-binding protein 1 [Achlya hypogyna])

HSP 1 Score: 429.5 bits (1103), Expect = 1.100e-116
Identity = 223/359 (62.12%), Postives = 264/359 (73.54%), Query Frame = 0
Query:   14 PADANEGCVGPTSEHAGKANACAGCPNQKVCASGEAKRVDPALAVVQDKLAQVKHKLVVLSGKGGVGKTTFACQLAFSLAQQHGLQVGLLDVDICGPSVPRVMGLNGQEVHQSAAGWSPVYVDDNLGVMSIGFMLPNQDDAVIWRGPRKNGLIKQFLTDVDWGELDYLIIDTPPGTSDEHLSIVQYLKQGCGVDGAVVVTTPQEVAMMDVRKELNFCKKTGLRVIGVVENMSGLTVPLKALRFWGGPLTASTDDVSGQDTSRNKPVVAAVAREDKTAAVLKALRQIDHSLLDCLVEADVFPAFGSGPQGMAAAFDVPFLGKLPLDPDLLRACEEGVSLAEKAPESSAVLALENIVRGVL 373
            P +AN+GCVG  S+ AGKA  CAGCPNQ +CASG  K  DP +A V++ L  VKH ++VLSGKGGVGK+T +CQLAF LA   G QVGLLDVDI GPSVPR++GL+GQEVHQS  GWSPVYVDDNLGVMSIGFMLPNQDDA+IWRGP+K+GLIKQFLTDV WGELDYLIIDTPPGTSDEH+SIVQY+K+   +DGAVVVTTPQEVAM DVRKELNFC+KTGL V+GVVENM+G+   L  ++F                       V   +  D+TA VL+ LR+    LL   V+  VFP    G + MA AF VPFLG+LPLD +L +ACE+GVS  E  P+SS   A E+IV+ V+
Sbjct:    4 PTNANDGCVGTQSDAAGKAAGCAGCPNQSLCASGATKLPDPTMAQVKNHLKDVKHIILVLSGKGGVGKSTVSCQLAFGLAGM-GHQVGLLDVDITGPSVPRMLGLSGQEVHQSNDGWSPVYVDDNLGVMSIGFMLPNQDDAIIWRGPKKSGLIKQFLTDVHWGELDYLIIDTPPGTSDEHISIVQYMKE-TKIDGAVVVTTPQEVAMADVRKELNFCRKTGLPVLGVVENMAGIQQTLDQVKF-----------------------VHPESASDETAHVLQVLREKAPELLQYAVQLQVFPPASGGGEAMARAFQVPFLGRLPLDANLTQACEQGVSFLEAYPKSSGAKAFESIVKQVI 337          
BLAST of NO02G01760 vs. NCBI_GenBank
Match: XP_002895265.1 (nucleotide-binding protein 1 [Phytophthora infestans T30-4] >EEY59030.1 nucleotide-binding protein 1 [Phytophthora infestans T30-4])

HSP 1 Score: 429.1 bits (1102), Expect = 1.500e-116
Identity = 221/359 (61.56%), Postives = 267/359 (74.37%), Query Frame = 0
Query:   14 PADANEGCVGPTSEHAGKANACAGCPNQKVCASGEAKRVDPALAVVQDKLAQVKHKLVVLSGKGGVGKTTFACQLAFSLAQQHGLQVGLLDVDICGPSVPRVMGLNGQEVHQSAAGWSPVYVDDNLGVMSIGFMLPNQDDAVIWRGPRKNGLIKQFLTDVDWGELDYLIIDTPPGTSDEHLSIVQYLKQGCGVDGAVVVTTPQEVAMMDVRKELNFCKKTGLRVIGVVENMSGLTVPLKALRFWGGPLTASTDDVSGQDTSRNKPVVAAVAREDKTAAVLKALRQIDHSLLDCLVEADVFPAFGSGPQGMAAAFDVPFLGKLPLDPDLLRACEEGVSLAEKAPESSAVLALENIVRGVL 373
            PA+AN  CVGP SE AGKA  C GCPNQ +CASG +++ DPA++ V+ +LA VKHKL+VLSGKGGVGK+T ACQLAF+LA + G QVGLLDVDI GPSVPR++GL GQEVHQSAAGWSPVYVDDNLGVMSIGFMLPN DDA+IWRGP+K+G+IKQFL DV WGELDYLIIDTPPGTSDEH+SIVQY+K+   +DGAVVVTTPQEVA+ DVRKELNFC+KT + V+GVVENMSG+  PL  ++F G                            D+T+A +K L++    LL   V+ +VFPA   G + MA  F+VPFLG+LPLD  +  ACEEGVS  E+ P+S A  A   IV+ ++
Sbjct:    6 PANANAECVGPQSEQAGKAGGCVGCPNQSLCASGTSRQPDPAVSDVKQRLAGVKHKLLVLSGKGGVGKSTVACQLAFALAGK-GFQVGLLDVDITGPSVPRMLGLVGQEVHQSAAGWSPVYVDDNLGVMSIGFMLPNADDAIIWRGPKKSGIIKQFLVDVQWGELDYLIIDTPPGTSDEHISIVQYMKE-ADLDGAVVVTTPQEVALSDVRKELNFCRKTNINVLGVVENMSGVQRPLSDVKFVGAD------------------------GNDETSAFMKLLQEKAPELLKHSVQMEVFPASTGGGEAMAKKFNVPFLGRLPLDNKMTGACEEGVSFLEEYPDSVAAPAFGKIVQDLV 338          
BLAST of NO02G01760 vs. NCBI_GenBank
Match: XP_024573126.1 (nucleotide-binding protein 1 [Plasmopara halstedii] >CEG36757.1 nucleotide-binding protein 1 [Plasmopara halstedii])

HSP 1 Score: 428.7 bits (1101), Expect = 2.000e-116
Identity = 220/359 (61.28%), Postives = 268/359 (74.65%), Query Frame = 0
Query:   14 PADANEGCVGPTSEHAGKANACAGCPNQKVCASGEAKRVDPALAVVQDKLAQVKHKLVVLSGKGGVGKTTFACQLAFSLAQQHGLQVGLLDVDICGPSVPRVMGLNGQEVHQSAAGWSPVYVDDNLGVMSIGFMLPNQDDAVIWRGPRKNGLIKQFLTDVDWGELDYLIIDTPPGTSDEHLSIVQYLKQGCGVDGAVVVTTPQEVAMMDVRKELNFCKKTGLRVIGVVENMSGLTVPLKALRFWGGPLTASTDDVSGQDTSRNKPVVAAVAREDKTAAVLKALRQIDHSLLDCLVEADVFPAFGSGPQGMAAAFDVPFLGKLPLDPDLLRACEEGVSLAEKAPESSAVLALENIVRGVL 373
            PA+ANE CVGP SE AGK + C+GCPNQ VCASG A++ DPA++ V+ +L  VKHKL+VLSGKGGVGK+T ACQLAF+LA + G QVGLLDVDI GPSVPR++GL GQEVHQSAAGWSPVYVDDNLGVMSIGFMLPN DDA+IWRGP+K+G+IKQFL DV WGELDYLIIDTPPGTSDEH+SIVQY+K+   +DGAVVVTTPQEVA+ DVRKELNFC KT + V+GV+ENMSG+  PL  ++F           V+   T             D+TA V K L++    +L   V+ +VFP    G + MA  F+VPFLG+LPLD  +  +CEEGVS  E+ P+S A  A  +IV+ ++
Sbjct:    6 PANANEQCVGPQSELAGKVDGCSGCPNQSVCASGAARQPDPAVSDVKQRLKSVKHKLLVLSGKGGVGKSTIACQLAFALASK-GFQVGLLDVDITGPSVPRMLGLLGQEVHQSAAGWSPVYVDDNLGVMSIGFMLPNADDAIIWRGPKKSGIIKQFLVDVQWGELDYLIIDTPPGTSDEHISIVQYMKE-ADLDGAVVVTTPQEVALSDVRKELNFCHKTKINVLGVIENMSGVQRPLSDVKF-----------VNADGT-------------DETANVFKLLQEKTPEILQYSVQMEVFPVSDGGGEAMAKKFNVPFLGRLPLDDKMTSSCEEGVSFLEEYPDSVAAPAFNHIVQDLV 338          
The following BLAST results are available for this feature:
BLAST of NO02G01760 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM30507.13.500e-16679.31nucleotide-binding protein 1 [Nannochloropsis gadi... [more]
OWZ16556.13.800e-12061.96Nucleotide-binding protein 1 [Phytophthora megakar... [more]
XP_009538480.16.500e-12063.31hypothetical protein PHYSODRAFT_531325 [Phytophtho... [more]
ETI44167.11.600e-11862.67hypothetical protein F443_11104 [Phytophthora para... [more]
XP_008907079.11.600e-11862.67hypothetical protein PPTG_13103 [Phytophthora para... [more]
CBN75570.16.700e-11760.50conserved unknown protein [Ectocarpus siliculosus][more]
XP_009839707.16.700e-11762.09hypothetical protein H257_13758 [Aphanomyces astac... [more]
OQR86831.11.100e-11662.12nucleotide-binding protein 1 [Achlya hypogyna][more]
XP_002895265.11.500e-11661.56nucleotide-binding protein 1 [Phytophthora infesta... [more]
XP_024573126.12.000e-11661.28nucleotide-binding protein 1 [Plasmopara halstedii... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL016nonsL016Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR033ncniR033Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR032ncniR032Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR002ngnoR002Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR000ngnoR000Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK006801NSK006801Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO02G01760.1NO02G01760.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
Naga_100013g26gene182Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO02G01760.1NO02G01760.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO02G01760 ID=NO02G01760|Name=NO02G01760|organism=Nannochloropsis oceanica|type=gene|length=2136bp
CATAGGGTTTTAATATCCTTGCAGGGAAAATATTGGCCTAAATACGCAAT
ATTTTTTATGAGTTAAATAAATTCCTCTGAATTTATGCACTTGATGTTAT
GACAGGATTTTGGGGGGCCGTTGGTGCGATCTGAGGTGTGGTCTGAGGAT
AAAGTATGTCTTACCCCCGCCGGCCTTGGTGCTTCGCAGCAGACGCAAAT
TGCTGCCCAAGCTGACGACCTAAAAATGAAATCTTTTTCGTCTTACATTA
AATCTTCTCTCGATATTTACGTGAGTTTTCTATATGCGACAGTAATCCGA
AGCTGATTAGGTGTGGCCGATCTCATGTGTTTAGGCCATGTACACACAAA
TTAGTGTAAGACACAAAAGCCGAGCGTACCAAGGCATTTAAGTGCTGCCT
TGGCATAATTCCTCTTTTTTAGTTGGCCAATATCAGCTTGTCAGGTTGTC
TTTGGAGGGTGGAGCCGGCACAAGTGGAGGATACCAGACGAGAGCGACGA
GAGCTCGGAGTCGTTGTTCTGTTATTTGCACACGCATTGTTACCATCCAA
TGAGATTCAAATTCTGAGTGGCAGCATACACCTTAAACACGGCAGATATA
CTCTCACATACTTTCTTTCAACGCGTGGGCCGGTTGTCCTGGTCCCGGCA
GCTTTCTTCGCGATGGAACGCTCCATCACGGGTTACGAGGGGGTAGCCAT
GATCCACACCCACATACACGCAAAAACTCACCACCATCCTCCTCATACCC
CTATCGACAGCCATGTCCTCCTCGGAAACCTCCACCTCCACAGCTCCACC
GCCTGCCGACGCCAACGAGGGCTGTGTCGGCCCCACATCTGAGCACGCGG
GAAAGGCCAACGCCTGCGCGGGGTGCCCGAATCAGAAAGTATGTGCGTCA
GGCGAGGCTAAGCGGGTCGACCCTGCACTGGCCGTCGTCCAAGACAAGCT
AGCTCAAGTAAAGCACAAGCTGGTGGTGCTCTCAGGGAAGGGTGGTGTCG
GAAAGACGACTTTTGCCTGTCAGCTAGCGTTTAGTCTGGCGCAGCAGCAT
GGCTTGCAAGTGGGGTTGTTGGACGTGGATATTTGTGGGCCGAGCGTGCC
GCGTGTCATGGGATTGAACGGACAAGAAGTGCACCAAAGTGCGGCGGGCT
GGTCCCCTGTCTACGTAGACGACAATCTAGGAGTCATGTCTATTGGTTTT
ATGCTCCCTAATCAGGATGATGCTGTCATATGGCGGGGGCCGCGGAAAAA
TGGGTTGATCAAACAGTTTTTGACCGATGTAGACTGGGGAGAGTTGGATT
ATCTTATCATTGACACTCCACCTGGGACGTCTGACGAACATCTTTCCATC
GTGCAGTATTTGAAGCAAGGGTGTGGGGTGGATGGTGCTGTGGTCGTGAC
GACGCCACAGGAAGTGGCCATGATGGACGTGCGTAAGGAGCTGAATTTTT
GCAAGAAGACGGGGTTGAGGGTGATAGGGGTTGTGGAAAATATGAGCGGG
CTCACTGTTCCTCTGAAAGCCTTGCGGTTTTGGGGCGGACCTCTGACAGC
TAGCACTGATGATGTGAGTGGCCAAGATACCAGTAGGAACAAGCCAGTGG
TGGCGGCCGTGGCACGGGAGGACAAGACAGCCGCAGTGCTGAAGGCACTT
AGGCAGATTGATCATTCCTTGCTCGACTGCCTGGTGGAAGCGGATGTTTT
CCCTGCATTTGGTAGTGGACCACAAGGGATGGCCGCGGCATTCGATGTTC
CTTTTTTGGGAAAATTGCCCTTGGATCCTGATTTGTTGCGGGCCTGTGAG
GAAGGTGTGTCGTTGGCCGAGAAGGCGCCTGAGTCCTCGGCGGTGCTGGC
GTTGGAAAATATCGTGCGGGGTGTTTTGGATGGGACTAGGCTAGAGGTAG
GGAAGGAGAGGGATGTAGTTGGTGATGGAAAGGGAGGGGAGGCGCAGCTG
TGAGGGGTGATGTGTAAAAAGAGGTGGACTGTATTGAGCGTAGTCGTATA
TGCGCAGGTACGTTGTGAAAGAAATGGTGCGGAAAGAAGACGATTTAGAT
CTAGATTTCGGATTGAAAACTATTCTTTGGCTTGCTATTATCTTGATTTA
TCGATGCAAAAAAAAGGAATGAACCTCCTCCCAGGC
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protein sequence of NO02G01760.1

>NO02G01760.1-protein ID=NO02G01760.1-protein|Name=NO02G01760.1|organism=Nannochloropsis oceanica|type=polypeptide|length=397bp
MSSSETSTSTAPPPADANEGCVGPTSEHAGKANACAGCPNQKVCASGEAK
RVDPALAVVQDKLAQVKHKLVVLSGKGGVGKTTFACQLAFSLAQQHGLQV
GLLDVDICGPSVPRVMGLNGQEVHQSAAGWSPVYVDDNLGVMSIGFMLPN
QDDAVIWRGPRKNGLIKQFLTDVDWGELDYLIIDTPPGTSDEHLSIVQYL
KQGCGVDGAVVVTTPQEVAMMDVRKELNFCKKTGLRVIGVVENMSGLTVP
LKALRFWGGPLTASTDDVSGQDTSRNKPVVAAVAREDKTAAVLKALRQID
HSLLDCLVEADVFPAFGSGPQGMAAAFDVPFLGKLPLDPDLLRACEEGVS
LAEKAPESSAVLALENIVRGVLDGTRLEVGKERDVVGDGKGGEAQL*
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Synonyms
Publications