NO02G01720, NO02G01720 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO02G01720 vs. NCBI_GenBank
Match: EWM30534.1 (armadillo repeat containing 6 [Nannochloropsis gaditana]) HSP 1 Score: 548.5 bits (1412), Expect = 2.300e-152 Identity = 296/534 (55.43%), Postives = 356/534 (66.67%), Query Frame = 0 Query: 13 KKRISQVTFDETVRENMEEFELEREEAVTDAVRQFTSQGVDLGNICVALHECDGHWLKEVDAQLTFFITCLDNGVQVALPASWDRVGTVVALRALHAALTNADADKAANARKLMGSKGTVNVVARLWQEHQE-----XXXXXXXXAVVDARILALAVTQALCSGGSAGEASRDMFWPTSMRMLCNAAQQAYSQQDRAFYLPFLSLARVLCTRAEDNKVHYVRYGGLDLLVGALKDDPWASDRNIVCETCKALKAVTATDDFRKDFSASHTHTRALVGKGAIPLLLQSCHRFRTDLDTSAAALAALRNLANNDESVNQIASEGGLDLAVRALEAHWFHPPLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGKVKIQEHGLATMGAMALRSPENCKQLVGLGAVLVILQALRNHAEARSVQRQACLAIRNMVSREPEVGEAFLEGGAEPLLRLAGRYQESVDEAYAALRDLKCDVKRVTVDPVTGKVQDADQFGSTKSCFHPVFESSDNIEGAVEAAISAPSNSYRF 542 KKRISQ TFDETV ENM + E++R +AV DA++QFTSQGVDL NICV L+E DG WL+EVDAQLT CLDNG ++LP SW T+ AL+ALH+ALT++D +A NARKL+GSK VNV+AR+WQE + A+ AR+LA+AVT+A C GGSAG+ S+ F PTSMRMLC AA++A ++ R+F + LSL RVL TRAED+KV +V +GGLD LV L+ + WASD IV E C A+KAVTA DDFRKDFSASHTHTRAL KG IP+LLQ+C RF D DT A L ALRNLANN+ESVNQIASEGG+ VRAL+AH HP L + KIQEHGLAT+GAMALRSP+NC+ L EAFLE GAEPLLRLAGRYQESVDEAYAALRDLKCDVKRV VDP+TG+++ ++FGS K+ F P+F+SS++IEGAV+AAI+APSNSYRF Sbjct: 33 KKRISQATFDETVYENMVDLEMDRADAVKDALQQFTSQGVDLENICVTLNENDGRWLEEVDAQLTALKNCLDNGTDLSLPPSWSPEATLAALQALHSALTDSDIKRADNARKLLGSKDAVNVIARIWQEWGDEPSCVTLDPAEAEAIAKARLLAVAVTEAACGGGSAGDQSKHAFRPTSMRMLCQAARRAQLREQRSFLIASLSLVRVLSTRAEDHKVSFVEHGGLDTLVECLEKEAWASDCEIVREACGAIKAVTAVDDFRKDFSASHTHTRALTAKGCIPVLLQACRRFGADSDTVATGLDALRNLANNEESVNQIASEGGVVGTVRALQAHLSHPALARAATGLFRNVSADDRHKTRLCKNGAAQLMLEAMREHAQERKIQEHGLATLGAMALRSPDNCRHLFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEAFLEAGAEPLLRLAGRYQESVDEAYAALRDLKCDVKRVIVDPLTGEIKAPEEFGSAKTSFRPLFDSSNDIEGAVQAAINAPSNSYRF 566
BLAST of NO02G01720 vs. NCBI_GenBank
Match: OWZ09533.1 (hypothetical protein PHMEG_00017753 [Phytophthora megakarya]) HSP 1 Score: 171.0 bits (432), Expect = 1.000e-38 Identity = 155/546 (28.39%), Postives = 241/546 (44.14%), Query Frame = 0 Query: 12 AKKRISQVTFDETVRENMEEFELEREEAVTDAVRQFTSQGVDLGNICV--ALHECDGHWLKEVDAQLTFFITCLDNGVQVALPASWDRVGTVVALRALHAALTNADADKAANARKLMGSKGTVNVVARLWQEHQEXXXXXXXXAVVDARILALAVTQALCSGGSAGEASRDMFWPTSMRMLCNAAQQAYSQQDRAFYLPFLSLARVLCTRAEDNKVHYVRYGGLDLLVGALKDDPWASDRNIVCE-TCKALKAVTATDDFRKDFSASHTHTRALVGKGAIPLLLQSCHR---------FRTDLDTSAAALAALRNLANNDESVNQIASEGGLDLAVRALEAHWFHPPLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGKVKIQEHGLATMGAMALRSPENCKQLVGLGAVLVILQALRNHAEARSVQRQACLAIRNMVSREPEVGEAFLEG--------GAEPLLRLAGRYQESVDEAYAALRDLKCDVKRVTVDPVTGKVQDADQF--GSTKSCFHPVFESSDNIEGAVEAAISAP 536 ++++ISQ TFDE V EN+E+F++ EEA+ DAV+QF SQGVDL NI A DG + + A+L I L + + L D+V +V A + ++ AR + G ++ + L AVV + L + LC+ + ++D M+ L ++ Q+D + L+L + C + E NK H+ + G++ L L+ A +R ++ + + +T DD R FS + +ALV + IP L + +D LA L+ +A +E+ QIA GL ++A+ + + IQ++ A + A+ALRSPENC+ LV LGAV I ++++ H +V RQA LA+RNMV+R E+ FL EPLLR A +Y+ DEAYAALRDL CD++ + + K F+PV S+ + G+VE A AP Sbjct: 4 SRRQISQETFDECVAENVEDFDMSLEEAIADAVQQFESQGVDLSNIIKSGATQTADGQ--EPLPARLKRLIAELQDVSK--LKNEQDQVLKLV-------AELQSVCEEVPEARVVAGRNDAIDTLVEL---------LGADAAVVTSCCNLLVL---LCADNA---DNQDFVGVAGMQRLVETLKR---QEDEETVIRILTLVKTACVKHESNKAHFTKANGVEALCRHLER---AKEREVLSKHLALCFRVLTINDDPRATFSQAQDTIKALVERDVIPYSLDILRQAGRGDGAQVSNISVDLLVNWLAVLKQVAVTEENCQQIADLDGLTTVQNVMQAYEHNALVAKRCITVFRNVAAADELKRAILQSGGIERTLLIMHRHEADASIQQNACAMLAAIALRSPENCRALVDLGAVRQISRSMQAHRRDVAVLRQASLAVRNMVARSVELRPRFLHDEPEIEPLLQIEPLLREAQQYRGCGDEAYAALRDLGCDIQLSSFGAAAASAAATGSIKAPTIKPRFNPVQAQSNQLLGSVEEAAEAP 517
BLAST of NO02G01720 vs. NCBI_GenBank
Match: XP_024579533.1 (Uncharacterized conserved protein [Plasmopara halstedii] >CEG43164.1 Uncharacterized conserved protein [Plasmopara halstedii]) HSP 1 Score: 167.9 bits (424), Expect = 8.500e-38 Identity = 152/547 (27.79%), Postives = 238/547 (43.51%), Query Frame = 0 Query: 9 AGPAKKRISQVTFDETVRENMEEFELEREEAVTDAVRQFTSQGVDLGNICVALHECDGHWLKEVDAQLTFFITCLDNGVQVALPASWDRVGTVVALRALHAALTNADADKAANARKLMGSKGTVNVVARLWQEHQEXXXXXXXXAVVDARILALAVTQALCSGGSAGEASRDMFWPTSMRMLCNAAQQAYSQQDRAFYLPFLSLARVLCTRAEDNKVHYVRYGGLDLL---VGALKDDPWASDRNIVCETCKALKAVTATDDFRKDFSASHTHTRALVGKGAIPLLLQ---------SCHRFRTDLDTSAAALAALRNLANNDESVNQIASEGGLDLAVRALEAHWFHPPLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGKVKIQEHGLATMGAMALRSPENCKQLVGLGAVLVILQALRNHAEARSVQRQACLAIRNMVSREPEVGEAFL--EGGAEPLLRLAGRYQESVDEAYAALRDLKCDVKRVTVDPVTGKVQDADQFGSTKSC-FHPVFESSDNIEGAVEAAISAPSNSYR 541 A A+++ISQ TFDE V EN+E+FE+ EEAV DA++QF SQGVDL NI A + + + +L I L W+ ++ L +L L N ++ AR G ++V+ L + D ++ ++ + L + ++D M+ + ++ ++D + L L + C + E+NK ++ + G++ L + KD+ S + +C + +T DD R FS + +ALV +G I +L + D LA L+ LA +E+ +QIA G+ + ++A + + IQ++ AT+ A+ALRS EN + LV LG I +A++ H +V RQA LAIRNMV+R ++ FL E E LLR A +Y+ DEAYAALRDL CD++ T G TK F+PV S N+ G V+ AP +YR Sbjct: 2 ASTARRQISQETFDECVAENVEDFEMSLEEAVADAIQQFESQGVDLSNIIKAGKKQVVDGQEPLPLRLKRLIR--------ELQELWNSHRDMIKLLSLINELQNI-FEEVPEARVAAGRNDAMDVLLSLLE--------------ADTSVVVISSSNLLVLLCADNVDNQDFIGAFGMQQIVKVLER--WREDVETLVRLLPLVKAACFKHENNKANFSKKNGIEELCRHLDGTKDNKMLSKQLALC-----FRVLTINDDPRAVFSQAQDTVKALVERGVITYILDFLRHAGCSGTAQNSSASPDLLTNWLAVLKQLAITEENCHQIADLDGVIIVQSVMKAFHQNAAIAKRCITVFRNMAAADSLKRTILQSGTIEQTLLAMECHDADASIQQNACATLAAIALRSSENSRVLVDLGVARQISRAMQTHRRDVAVLRQASLAIRNMVARSVDLRSRFLHDEPEIEALLREAQQYRGCGDEAYAALRDLSCDIQLSTY----GSAASGSYNAPTKILRFNPVQVQSSNLIGRVQETAEAPCRNYR 514
BLAST of NO02G01720 vs. NCBI_GenBank
Match: XP_016160556.1 (PREDICTED: armadillo repeat-containing protein 6 [Ficedula albicollis]) HSP 1 Score: 159.5 bits (402), Expect = 3.000e-35 Identity = 136/479 (28.39%), Postives = 210/479 (43.84%), Query Frame = 0 Query: 14 KRISQVTFDETVRENMEEFELEREEAVTDAVRQFTSQGVDLGNICVALHECDGHWLKEVDAQLTFFITCLDNGVQVALPASWDRVGTVVALRALHAALTNADADKAANARKLMGSKGTVNVVARLWQEHQEXXXXXXXXAVVDARILALAVTQALCSGGSAGEASRDMFWPTSMRMLCNAAQQAYSQQDRAFYLPFLSLARVLCTRAEDNKVHYVRYGGLDLLVGALKDDPWASDRNIVCETCKALKAVTATDDFRKDFSASHTHTRALV-GKGAIPLLLQSCHRFRTDLDTSAAALAALRNLANNDESVNQIASEGGLDLAVRALEAHWFHPPLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGKVKIQEHGLATMGAMALRSPENCKQLVGLGAVLVILQALRNHAEARSVQRQACLAIRNMVSREPEVGEAFLEGGAEPLLRLA-GRYQESVDEAYAALRDLKCDVK 491 K+I+Q TFD+ V+EN+ EFE++ EEAV +AV+QF SQGVDL NI A+ + Q+ + L V A D L AL A A + R G+ + RL + D+ +LA + AL G D+ ++L + ++ ++D L + R C + E N+ +V+ G L LL GA+ +++ +V AL+ +T DD R F +H H + +V + +L+++ FR + + A L L+ +E +I GGL+ V L HP + G +I E G A + +ALR PENC ++ G L LQA++ H +VQ+QAC+ IRN+VSR ++ + L GAEPL+ A +++ D A AALRDL C V+ Sbjct: 4 KQIAQETFDDAVQENITEFEMDPEEAVREAVQQFESQGVDLSNIVKAVPPPASENGQRQKHQILLSLESLCRAV-----AERDVAELPRQLSALAAQCREQPASRYLAGRN--GAYPALLSACRLAAGDR------------DSLLLAFSTLAALLDG------QPDLLDAAGQQLLLQSLRE--RREDAEMTLAGIRCVRHACLKHEQNRQDFVKGGILPLLTGAITQHGHSAE--VVRAAASALRIMTFDDDIRVPFGHAHDHAKMIVLENDGLRVLIEAAKAFRDNSGVLSELCATLSRLSVRNEFCQEIVDLGGLNFMVTLLADCMEHPDVVKQVLSAIRAVAGNDDVKDAIVGAGATELIVLAISRHLGNPQICEQGCAALCVLALRKPENCSVIMEGGGALAALQAMKAHPREVAVQKQACMLIRNLVSRSRDLSQPILALGAEPLISEARAAHRDCDDVARAALRDLGCKVE 453
BLAST of NO02G01720 vs. NCBI_GenBank
Match: XP_008618215.1 (hypothetical protein SDRG_13892 [Saprolegnia diclina VS20] >EQC28345.1 hypothetical protein SDRG_13892 [Saprolegnia diclina VS20]) HSP 1 Score: 159.5 bits (402), Expect = 3.000e-35 Identity = 155/536 (28.92%), Postives = 235/536 (43.84%), Query Frame = 0 Query: 8 AAGPAKKRISQVTFDETVRENMEEFELEREEAVTDAVRQFTSQGVDLGNICVALHECDGHWLKEVDAQLTFFITCLDNGVQVALPASWDRVGTVVALRALHAALTN---ADADKAANARKLMGSKGTVNVVARLWQEHQEXXXXXXXXAVVDARILALAVTQALCSGGSAGEASRDMFWPTSMRMLCNAAQQAYSQQDRAFYLPFLSLARVLCTRAEDNKVHYVRYGGLDLLVGALKDDPWASDRNIVCETCKALKAVTATDDFRKDFSASHTHTRALVGKGAIPLLLQSCHRFRTDLDTSAAALAALRNLANNDESVNQIASEGGLDLAVRALEAHWFHPPLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGKVKIQEHGLATMGAMALRSPENCKQLVGLGAVLVILQALRNHAEARSVQRQACLAIRNMVSREPEVGEAFLEGGAEPLLRLAGRYQESV----DEAYAALRDLKCDVKRVTVDPVTGKVQDADQFGSTKSC-FHPVFESSDNIEGAVEAAISAP 536 A AKK+I+Q TF++ VRENM+EFE++ +EAV DA++QF SQGVDL +I AL H + + L++ AL A D V AL LT+ ADA A +A+++ G V+ L Q + V+ A + + Q G + + PT+ + NAA L+ + +C + E NK H + G+ LL+ L+ ++D + + ++ +T DD FS +H + V + IP+ + +D DT A LA L+ LA +++ +I G LDL H H + V IQ AT+ A+ LRSP NC+++V L A + + A+ + S+ RQA LA+RNMV R E+ LE EPL+ L R+ + DEAYAALRDL CD+ P+ Q SC F+P ++S+ ++ +V A AP Sbjct: 2 ATKQAKKQITQETFNDCVRENMDEFEMDEDEAVDDAIKQFESQGVDLSSIVKALTTSVVHPV----------VVALES--LRALAADADVVALDQALPHYTILLTHFRAADAAAATSAKEMAGRNDGTTVLLGLLQGSVDHSMQMQTLVVLHAMVNGVKDNQDFV-GVDGILQLQALAAPTAATPVQNAA---------------LAALKTICAKHESNKKH-LNPAGIRLLMSLLETRKESTDTKHIGD---LIRTLTINDDPTAMFSQAHDIVKLFVDESLIPMTFEHISVVASDADTVAVWLAVLKQLAVTEDNCRKIVDSGALDLVPNLQATHAKHRGV--IKHSLGLLRNIAGVDEYKHVVTTMVPSILATMQEHASDVGIQTMACATIAAVCLRSPVNCQKVVSLRAHVWVATAMASFPGLPSLLRQASLALRNMVVRNEELRPLVLE---EPLVELMLRHAMPLRGCGDEAYAALRDLGCDI------PLAAITQQG-------SCNFNPTMDTSNMLQSSVAANARAP 487
BLAST of NO02G01720 vs. NCBI_GenBank
Match: XP_014742730.1 (PREDICTED: armadillo repeat-containing protein 6 [Sturnus vulgaris] >XP_014742731.1 PREDICTED: armadillo repeat-containing protein 6 [Sturnus vulgaris]) HSP 1 Score: 157.5 bits (397), Expect = 1.100e-34 Identity = 135/479 (28.18%), Postives = 207/479 (43.22%), Query Frame = 0 Query: 14 KRISQVTFDETVRENMEEFELEREEAVTDAVRQFTSQGVDLGNICVALHECDGHWLKEVDAQLTFFITCLDNGVQVALPASWDRVGTVVALRALHAALTNADADKAANARKLMGSKGTVNVVARLWQEHQEXXXXXXXXAVVDARILALAVTQALCSGGSAGEASRDMFWPTSMRMLCNAAQQAYSQQDRAFYLPFLSLARVLCTRAEDNKVHYVRYGGLDLLVGALKDDPWASDRNIVCETCKALKAVTATDDFRKDFSASHTHTRALV-GKGAIPLLLQSCHRFRTDLDTSAAALAALRNLANNDESVNQIASEGGLDLAVRALEAHWFHPPLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGKVKIQEHGLATMGAMALRSPENCKQLVGLGAVLVILQALRNHAEARSVQRQACLAIRNMVSREPEVGEAFLEGGAEPLLRLA-GRYQESVDEAYAALRDLKCDVK 491 K+I+Q TFD+ V+EN+ EFE++ EEAV +AV QF SQGVDL NI A+ + Q + LD+ + A + ++ A A + R L G KG VV Q A D +L QALC+ + + D+ +L + ++ + D L + R C + E N+ +V+ G L LL GA+ +++ +V AL+ +T DD R F +H H + +V + +L+++ F + + A L L+ +E I GGL+ V L HP + G +I E G A + +ALR PENC ++ G L LQA++ H +VQ+QAC+ IRN+VSR ++ + L GAE L+ A +++ D A AALRDL C V+ Sbjct: 4 KQIAQETFDDAVQENITEFEMDPEEAVREAVLQFESQGVDLSNIVKAVRPPAS---ENGQRQKHQILLTLDSLARAVAEADMGELPQQLSAFA-------AQCKEQLAFRYLAGQKGAYPVVFSACQ-----------LAAGDRELL----LQALCTLSALLDGQPDLLDAAGQELLLQSLRE--RRDDADMTLAGIRCLRHACLKHEQNRQDFVKGGILPLLTGAIVQHGHSAE--VVRTAASALRIMTFDDDIRVPFGHAHDHAKMIVLENDGLRVLIEAAKAFTDNSGVLSELCATLSRLSVRNEFCQDIVDLGGLNFMVTLLADCMEHPDVVKQVLSAIRAVAGNDDVKDAIVDAGATELIVLAISHHLGNPQICEQGCAALCVLALRKPENCSVIMEGGGALAALQAMKAHPREVAVQKQACMLIRNLVSRSRDLSQPILAMGAELLIAEARAAHRDCDDVARAALRDLGCQVE 453
BLAST of NO02G01720 vs. NCBI_GenBank
Match: XP_019369154.1 (PREDICTED: armadillo repeat-containing protein 6 [Gavialis gangeticus] >XP_019369155.1 PREDICTED: armadillo repeat-containing protein 6 [Gavialis gangeticus]) HSP 1 Score: 155.6 bits (392), Expect = 4.400e-34 Identity = 138/487 (28.34%), Postives = 202/487 (41.48%), Query Frame = 0 Query: 12 AKKRISQVTFDETVRENMEEFELEREEAVTDAVRQFTSQGVDLGNICVALHECDGHWLKEVDAQLTFFITCLDNGVQVALPASWDR---VGTVVALRALHAALTNADADKAANARKLMGSKGTVNVV---ARLWQEHQEXXXXXXXXAVVDARILALAVTQALCSGGSAGEASRDMFWPTSMRMLCNAAQQAYSQQDRAFYLPFLSLARVLCTRAEDNKVHYVRYGGLDLLVGALKDDPWASDRNIVCETCKALKAVTATDDFRKDFSASHTHTRALVGKG-AIPLLLQSCHRFRTDLDTSAAALAALRNLANNDESVNQIASEGGLDLAVRALEAHWFHPPLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGKVKIQEHGLATMGAMALRSPENCKQLVGLGAVLVILQALRNHAEARSVQRQACLAIRNMVSREPEVGEAFLEGGAEPLLRLA-GRYQESVDEAYAALRDLKCDVK 491 A KR++Q TFDE V+EN+ EF+++ EEAV +AV QF SQGVDL I A + + Q + LD W R + +++ H A + +R L G KG VV RL + + QAL + + E D+ +ML ++ D L + R C + E N+ V+ G L LL A+ + ++V E C AL+ +T DD R F +H H R +V + + +L+++ F D A L L+ +E +I GGL+ V L L +I E G A + +ALR PENCK ++ G L LQA++ H +VQ+ AC+ IRN+VSR + + LE GAE L+ A +Q+ D A AALRDL C V+ Sbjct: 2 ASKRVTQETFDEVVQENITEFDMDPEEAVREAVEQFESQGVDLSTIVKAAPRPAS---ENGEGQKHEILQTLD----------WLRKSIADSELSVAGEHLASLSKQCKMQLASRYLAGQKGAYPVVLSACRLASGDES------------------TMLQALQALSALMEGQPDLLDSVGQKMLLQTLKE--KADDVEMMLAGIRCVRHACLKHEQNRQDLVKGGLLPLLTSAIVQH--GNHASLVREACSALRIMTFDDDIRVPFGHAHDHARMIVAENDGLKILIEAAKAFPGDSSVLTELCATLSRLSVRNEFCQEIVDLGGLNFMVSLLADCIDQKELVKQVLSAVRAIAGNDDVKDAIISAGGTDLIVLAMNHHLANPQICEQGCAALCMLALRKPENCKVIMEGGGALAALQAMKAHPREVTVQKHACMLIRNLVSRSQDFSQPILEMGAESLIAEALAAHQDCGDVAKAALRDLGCKVE 453
BLAST of NO02G01720 vs. NCBI_GenBank
Match: XP_010009649.1 (PREDICTED: armadillo repeat-containing protein 6 isoform X2 [Nestor notabilis] >KFQ42007.1 Armadillo repeat-containing protein 6 [Nestor notabilis]) HSP 1 Score: 155.2 bits (391), Expect = 5.700e-34 Identity = 134/479 (27.97%), Postives = 206/479 (43.01%), Query Frame = 0 Query: 14 KRISQVTFDETVRENMEEFELEREEAVTDAVRQFTSQGVDLGNICVALHECDGHWLKEVDAQLTFFITCLDNGVQVALPASWDRVGTVVALRALHAALTNADADKAANARKLMGSKGTVNVVARLWQEHQEXXXXXXXXAVVDARILALAVTQALCSGGSAGEASRDMFWPTSMRMLCNAAQQAYSQQDRAFYLPFLSLARVLCTRAEDNKVHYVRYGGLDLLVGALKDDPWASDRNIVCETCKALKAVTATDDFRKDFSASHTHTRALV-GKGAIPLLLQSCHRFRTDLDTSAAALAALRNLANNDESVNQIASEGGLDLAVRALEAHWFHPPLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGKVKIQEHGLATMGAMALRSPENCKQLVGLGAVLVILQALRNHAEARSVQRQACLAIRNMVSREPEVGEAFLEGGAEPLLRLA-GRYQESVDEAYAALRDLKCDVK 491 K+I+Q TFD+ V+ENM EFE++ EEAV +AV+QF SQGVDL NI A+ ++ ++ + L V + +A A + A + R L G G VV Q A D ++ +A S + + D+ T +L Q+ ++D L + R C + E N+ +V+ G L LL GA+ ++D +V AL+ +T DD R F +H H + +V + +L+++ F + + A L L+ +E +I GGL+ V L HP + +I E G A + +ALR PENC ++ G L LQA++ H +VQ+QAC+ IRN+VSR + + LE GAE L+ A +++ D A AALRDL C V+ Sbjct: 4 KQITQETFDDAVQENMTEFEMDPEEAVREAVQQFESQGVDLSNIVKAVRPPASENGQKQKHEILLTLDALGKAV----------ADSDLAEVAKQLVVFTAQCKEQLAFRCLAGQNGAYPVVFSACQ-----------VASGDRNLM----LEAFYSLSALLDGQPDLLDSTGQDLLLQTLQE--YREDADMVLAGVRCVRHACLKHEQNRQDFVKGGILPLLTGAIVQHRHSAD--VVRAAASALRIMTFDDDIRVPFGHAHDHAKMIVLENDGLRVLIEAAKAFTDNSSVLSELCATLSRLSVRNEFCQEIVDLGGLNFMVSLLADCIDHPDVVKQVLSAIRAVAGNDDVKDAIVSAGATDLIVLAISHHLANPQICEQGCAALCMLALRKPENCSVIMEGGGALAALQAMKAHPREVAVQKQACMLIRNLVSRSRDFSQPILEMGAENLITEARATHRDCDDVAKAALRDLGCKVE 453
BLAST of NO02G01720 vs. NCBI_GenBank
Match: XP_005505520.1 (armadillo repeat-containing protein 6 [Columba livia] >XP_013223447.1 armadillo repeat-containing protein 6 [Columba livia] >PKK19456.1 armadillo repeat containing 6, transcript variant X1 [Columba livia]) HSP 1 Score: 151.8 bits (382), Expect = 6.300e-33 Identity = 134/484 (27.69%), Postives = 207/484 (42.77%), Query Frame = 0 Query: 14 KRISQVTFDETVRENMEEFELEREEAVTDAVRQFTSQGVDLGNICVALHECDGHWLKEVDAQLTFFITCLDNGVQVALPASWDRVGTVVA----LRALHAALTNADADKAANA-RKLMGSKGTVNVVARLWQEHQEXXXXXXXXAVVDARILALAVTQALCSGGSAGEASRDMFWPTSMRMLCNAAQQAYSQQDRAFYLPFLSLARVLCTRAEDNKVHYVRYGGLDLLVGALKDDPWASDRNIVCETCKALKAVTATDDFRKDFSASHTHTRALV-GKGAIPLLLQSCHRFRTDLDTSAAALAALRNLANNDESVNQIASEGGLDLAVRALEAHWFHPPLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGKVKIQEHGLATMGAMALRSPENCKQLVGLGAVLVILQALRNHAEARSVQRQACLAIRNMVSREPEVGEAFLEGGAEPLLRLA-GRYQESVDEAYAALRDLKCDVK 491 K+I+Q TFD+ V+EN+ EFE++ EEAV +AV+QF SQGVDL NI A+ + +NG + + + D +G VA + D K A R L G G +VV Q A D ++ +A + + + D+ +L Q+ ++D L + R C + E N+ +V+ G L LL GA+ ++D +V L+ +T DD R F +H H + +V + +L+++ F + + A L L+ +E +I GGL+ V L HP + +I E G A + +ALR PENC ++ G L LQA++ H +VQ+QAC+ IRN+VSR + + LE GAE L+ A +++ D A AALRDL C V+ Sbjct: 4 KQIAQETFDDAVQENITEFEMDPEEAVREAVQQFESQGVDLSNIVKAVRQ-----------------PASENGQKHQILLTLDSLGRAVADSDLAEMAEQLVVFTDQCKEQLAFRYLAGQNGAYSVVFSACQ-----------LASGDRNLM----LKAFSTLSAVLDGQPDLLDSAGQVLLLQTLQE--YREDAEMTLAGMRCIRHACLKHEQNRQDFVKGGVLPLLTGAIVQHGDSAD--VVRTASSTLRVMTFDDDIRVPFGHAHDHAKMIVLENDGLRVLIEAAKAFTDNSSVLSELCATLSRLSVRNEFCQEIVDLGGLNFMVSLLADSIDHPDVVKQVLSAIRAVAGNDDVKDAIVNAGTTDLIVLAISHHLANPQICEQGCAALCMLALRKPENCNVIMEGGGALAALQAMKAHPREVAVQKQACMLIRNLVSRSRDFSQPILEMGAENLITEARATHKDCDDVAKAALRDLGCKVE 451
BLAST of NO02G01720 vs. NCBI_GenBank
Match: PKK19455.1 (armadillo repeat containing 6, transcript variant X2, partial [Columba livia]) HSP 1 Score: 151.8 bits (382), Expect = 6.300e-33 Identity = 134/484 (27.69%), Postives = 207/484 (42.77%), Query Frame = 0 Query: 14 KRISQVTFDETVRENMEEFELEREEAVTDAVRQFTSQGVDLGNICVALHECDGHWLKEVDAQLTFFITCLDNGVQVALPASWDRVGTVVA----LRALHAALTNADADKAANA-RKLMGSKGTVNVVARLWQEHQEXXXXXXXXAVVDARILALAVTQALCSGGSAGEASRDMFWPTSMRMLCNAAQQAYSQQDRAFYLPFLSLARVLCTRAEDNKVHYVRYGGLDLLVGALKDDPWASDRNIVCETCKALKAVTATDDFRKDFSASHTHTRALV-GKGAIPLLLQSCHRFRTDLDTSAAALAALRNLANNDESVNQIASEGGLDLAVRALEAHWFHPPLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGKVKIQEHGLATMGAMALRSPENCKQLVGLGAVLVILQALRNHAEARSVQRQACLAIRNMVSREPEVGEAFLEGGAEPLLRLA-GRYQESVDEAYAALRDLKCDVK 491 K+I+Q TFD+ V+EN+ EFE++ EEAV +AV+QF SQGVDL NI A+ + +NG + + + D +G VA + D K A R L G G +VV Q A D ++ +A + + + D+ +L Q+ ++D L + R C + E N+ +V+ G L LL GA+ ++D +V L+ +T DD R F +H H + +V + +L+++ F + + A L L+ +E +I GGL+ V L HP + +I E G A + +ALR PENC ++ G L LQA++ H +VQ+QAC+ IRN+VSR + + LE GAE L+ A +++ D A AALRDL C V+ Sbjct: 35 KQIAQETFDDAVQENITEFEMDPEEAVREAVQQFESQGVDLSNIVKAVRQ-----------------PASENGQKHQILLTLDSLGRAVADSDLAEMAEQLVVFTDQCKEQLAFRYLAGQNGAYSVVFSACQ-----------LASGDRNLM----LKAFSTLSAVLDGQPDLLDSAGQVLLLQTLQE--YREDAEMTLAGMRCIRHACLKHEQNRQDFVKGGVLPLLTGAIVQHGDSAD--VVRTASSTLRVMTFDDDIRVPFGHAHDHAKMIVLENDGLRVLIEAAKAFTDNSSVLSELCATLSRLSVRNEFCQEIVDLGGLNFMVSLLADSIDHPDVVKQVLSAIRAVAGNDDVKDAIVNAGTTDLIVLAISHHLANPQICEQGCAALCMLALRKPENCNVIMEGGGALAALQAMKAHPREVAVQKQACMLIRNLVSRSRDFSQPILEMGAENLITEARATHKDCDDVAKAALRDLGCKVE 482 The following BLAST results are available for this feature:
BLAST of NO02G01720 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO02G01720 ID=NO02G01720|Name=NO02G01720|organism=Nannochloropsis oceanica|type=gene|length=1626bpback to top protein sequence of NO02G01720.1 >NO02G01720.1-protein ID=NO02G01720.1-protein|Name=NO02G01720.1|organism=Nannochloropsis oceanica|type=polypeptide|length=542bpback to top Synonyms
Publications
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