NO02G01660, NO02G01660 (gene) Nannochloropsis oceanica

Overview
NameNO02G01660
Unique NameNO02G01660
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length3555
Alignment locationchr2:487949..491503 +

Link to JBrowse

Properties
Property NameValue
DescriptiondTDP-glucose 4,6-dehydratase
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr2genomechr2:487949..491503 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR036291NAD(P)-bd_dom_sf
IPR016040NAD(P)-bd_dom
Homology
BLAST of NO02G01660 vs. NCBI_GenBank
Match: EWM30544.1 (dTDP-glucose 4,6-dehydratase [Nannochloropsis gaditana])

HSP 1 Score: 634.0 bits (1634), Expect = 3.800e-178
Identity = 317/421 (75.30%), Postives = 346/421 (82.19%), Query Frame = 0
Query:   96 DTIAGSGSELQHTPKNILVTGGAGFIGSHVAILLAHKYPKYKIVVLDKLDYCASLDNLSEVNRRRNFKFVKGNICSSDLVNFVLEEEEIDTVLHLAAQTHVDNSFGNSFSFTQNNILGTHVLLESAKVHGIKRFVHCSTDEVYGEGTADQEPMFEDNVLEPTNPYAATKAGAEFLAKSYHRSFNLPVIITRGNNVYGPHQYPEKLIPKFINLLQRARPLTLHGNGLNTRNFLYVTDVAKAFDCVLHYGETGKIYNIGGTHEKTNVDVAKDLIRKMELL---PSAADNVKAYPSAGDESAAQEKREGL----------------DTSVSSAVAAAAWDLPKDDDDSAYGPYLTFVEDRPFNDLRYSINSEALRRLGWREEVSWEDGLAETIQWYIHKAQNRWGNIESALVPHPKGPLPDDAA 498
            D++ G     Q+TPKNILVTGGAGFIGSHVAILLAH+YPKYKIVVLDKLDYCASL+NL++V RRRNFKFVKGNICSSDLVNFVLEEEEIDT++HLAAQTHVDNSFGNSFSFTQNNILGTHVLLESAKVHGI+RFVH STDEVYGEG A QEPMFEDNVLEPTNPYAATKAGAEFLAKSYHRSFNLPVIITRGNNVYGPHQYPEKLIPKFINLL R R LTLHGNGLNTRNFLYVTDVA+A+D VLH+GETGKIYNIGGTHE  N++VAKD+IRKM LL    + A         G  +     + GL                D S++  VAAA       ++D+AY   LTFVEDRPFNDLRYSINSEALRRLGWREEV+WEDGLA TI WY  +AQ+RWGNIE+ALV HP+GP PDD A
Sbjct:    7 DSLNGIMPSCQYTPKNILVTGGAGFIGSHVAILLAHRYPKYKIVVLDKLDYCASLENLADVTRRRNFKFVKGNICSSDLVNFVLEEEEIDTIVHLAAQTHVDNSFGNSFSFTQNNILGTHVLLESAKVHGIRRFVHVSTDEVYGEGAAGQEPMFEDNVLEPTNPYAATKAGAEFLAKSYHRSFNLPVIITRGNNVYGPHQYPEKLIPKFINLLLRGRRLTLHGNGLNTRNFLYVTDVARAYDVVLHFGETGKIYNIGGTHEMANLEVAKDVIRKMGLLSGREAGAQGADVDGVVGTNAVVDRSQVGLEKDQEKASIGKDVGQGDASITPGVAAAG----NIEEDAAYARLLTFVEDRPFNDLRYSINSEALRRLGWREEVAWEDGLARTIDWYRQQAQDRWGNIEAALVAHPQGPSPDDGA 423          
BLAST of NO02G01660 vs. NCBI_GenBank
Match: XP_005854661.1 (dTDP-glucose 4,6-dehydratase [Nannochloropsis gaditana CCMP526] >EKU21695.1 dTDP-glucose 4,6-dehydratase [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 535.0 bits (1377), Expect = 2.400e-148
Identity = 264/390 (67.69%), Postives = 299/390 (76.67%), Query Frame = 0
Query:  100 GSGSELQHTPKNILVTGGAGFIGSHVAILLAHKYPKYKIVVLDKLDYCASLDNLSEVNRRRNFKFVKGNICSSDLVNFVLEEEEIDTVLHLAAQTHVDNSFGNSFSFTQNNILGTHVLLESAKVHGIKRFVHCSTDEVYGEGTADQEPMFEDNVLEPTNPYAATKAGAEFLAKSYHRSFNLPVIITRGNNVYGPHQYPEKLIPKFINLLQRARPLTLHGNGLNTRNFLYVTDVAKAFDCVLHYGETGKIYNIGGTHEKTNVDVAKDLIRKMELLPSAADNVKAYPSAGDESAAQEKREGLDTSVSSAVAAAAWDLPKDDDDSAYGPYLTFVEDRPFNDLRYSINSEALRRLGWREEVSWEDGLAETIQWYIHKAQNRWGNIESALVPHPK 490
            GS  E ++TPKNILVTGGAGFI SHV +LL  K+PKYKIV LD+LDYC+ L+NL E+   +N+KFVKGNICSSDLVN+VLEEEEIDT++H AAQTHVDNSFGNSFSFTQNNILGTHVLLESAKVH IKRF+H STDEVYGEG ADQEPMFED VLEPTNPYAATKAGAEF+AKSY RSFNLP+IITRGNNVYGPHQYPEKLIPKF+NLL R RP+TLHGNGLNTRNFLYV DVA+AF+ +LH G TGKIYNIGGTHEK N++VAKDLIR M                      +EK                               L FVEDR FNDLRY++NSEAL++LGWRE VSWEDGL +T++WY  +   R+GNI+ ALV HP+
Sbjct:    9 GSAPEAEYTPKNILVTGGAGFIASHVVLLLVKKFPKYKIVNLDRLDYCSCLENLDEIKYYKNYKFVKGNICSSDLVNYVLEEEEIDTIMHFAAQTHVDNSFGNSFSFTQNNILGTHVLLESAKVHNIKRFIHVSTDEVYGEGAADQEPMFEDQVLEPTNPYAATKAGAEFIAKSYSRSFNLPLIITRGNNVYGPHQYPEKLIPKFVNLLMRDRPVTLHGNGLNTRNFLYVEDVARAFEVILHRGVTGKIYNIGGTHEKANIEVAKDLIRLM-----------------GHGKEEEK------------------------------MLQFVEDRAFNDLRYTVNSEALKQLGWREIVSWEDGLHKTVEWY-KQHTGRYGNIDCALVAHPR 350          
BLAST of NO02G01660 vs. NCBI_GenBank
Match: EWM28017.1 (rhamnose biosynthetic enzyme expressed [Nannochloropsis gaditana])

HSP 1 Score: 534.6 bits (1376), Expect = 3.200e-148
Identity = 266/404 (65.84%), Postives = 303/404 (75.00%), Query Frame = 0
Query:   86 PSSPLTMNGMDTIAGSGSELQHTPKNILVTGGAGFIGSHVAILLAHKYPKYKIVVLDKLDYCASLDNLSEVNRRRNFKFVKGNICSSDLVNFVLEEEEIDTVLHLAAQTHVDNSFGNSFSFTQNNILGTHVLLESAKVHGIKRFVHCSTDEVYGEGTADQEPMFEDNVLEPTNPYAATKAGAEFLAKSYHRSFNLPVIITRGNNVYGPHQYPEKLIPKFINLLQRARPLTLHGNGLNTRNFLYVTDVAKAFDCVLHYGETGKIYNIGGTHEKTNVDVAKDLIRKMELLPSAADNVKAYPSAGDESAAQEKREGLDTSVSSAVAAAAWDLPKDDDDSAYGPYLTFVEDRPFNDLRYSINSEALRRLGWREEVSWEDGLAETIQWYIHKAQNRWGNIESALVPHPK 490
            P     M+  +   GS  E ++TPKNILVTGGAGFI SHV +LL  K+PKYKIV LD+LDYC+ L+NL E+   +N+KFVKGNICSSDLVN+VLEEEEIDT++H AAQTHVDNSFGNSFSFTQNNILGTHVLLESAKVH IKRF+H STDEVYGEG ADQEPMFED VLEPTNPYAATKAGAEF+AKSY RSFNLP+IITRGNNVYGPHQYPEKLIPKF+NLL R RP+TLHGNGLNTRNFLYV DVA+AF+ +LH G TGKIYNIGGTHEK N++VAKDLIR M                      +EK                               L FVEDR FNDLRY++NSEAL++LGWRE VSWEDGL +T++WY  +   R+GNI+ ALV HP+
Sbjct:   40 PCISFIMSNGNVHNGSAPEAEYTPKNILVTGGAGFIASHVVLLLVKKFPKYKIVNLDRLDYCSCLENLDEIKYYKNYKFVKGNICSSDLVNYVLEEEEIDTIMHFAAQTHVDNSFGNSFSFTQNNILGTHVLLESAKVHNIKRFIHVSTDEVYGEGAADQEPMFEDQVLEPTNPYAATKAGAEFIAKSYSRSFNLPLIITRGNNVYGPHQYPEKLIPKFVNLLMRDRPVTLHGNGLNTRNFLYVEDVARAFEVILHRGVTGKIYNIGGTHEKANIEVAKDLIRLM-----------------GHGKEEEK------------------------------MLQFVEDRAFNDLRYTVNSEALKQLGWREIVSWEDGLHKTVEWY-KQHTGRYGNIDCALVAHPR 395          
BLAST of NO02G01660 vs. NCBI_GenBank
Match: XP_009035289.1 (hypothetical protein AURANDRAFT_23143, partial [Aureococcus anophagefferens] >EGB10498.1 hypothetical protein AURANDRAFT_23143, partial [Aureococcus anophagefferens])

HSP 1 Score: 459.1 bits (1180), Expect = 1.700e-125
Identity = 231/377 (61.27%), Postives = 272/377 (72.15%), Query Frame = 0
Query:  114 VTGGAGFIGSHVAILLAHKYPKYKIVVLDKLDYCASLDNLSEVNRRRNFKFVKGNICSSDLVNFVLEEEEIDTVLHLAAQTHVDNSFGNSFSFTQNNILGTHVLLESAKVHGIKRFVHCSTDEVYGEG-TADQEPMFEDNVLEPTNPYAATKAGAEFLAKSYHRSFNLPVIITRGNNVYGPHQYPEKLIPKFINLLQRARPLTLHGNGLNTRNFLYVTDVAKAFDCVLHYGETGKIYNIGGTHEKTNVDVAKDLIRKMELLPSAADNVKAYPSAGDESAAQEKREGLDTSVSSAVAAAAWDLPKDDDDSAYGPYLTFVEDRPFNDLRYSINSEALRRLGWREEVSWEDGLAETIQWYIHKAQNRWGNIESALVPHPK 490
            VTGGAGFI SHV ILLA K     IV  D+LDYCA ++NL+EV +  N+KFVKG+ICS+DLVNFVLE EE+DT++H AAQTHVDNSFGNSF FT+NNI+GTHVLLE+AKVH IKRFVH STDEVYGEG   + EPM ED+VLEPTNPYAATKA AEFL KSYHRSF LP+IITRGNNVYGPHQ+PEKLIPKF+N L R RP+TLHG G NTRNFLYV DVA+AFDC+LH    GKIYNIGG +E++N+ VAK+LIR M                           GL  + SS +                    TFV DR FNDLRY+I++  L +LGW+E +SWE+GLA T++WY  K  NR+ +IE ALV HP+
Sbjct:    1 VTGGAGFIASHVVILLAKKRGPGVIVNFDRLDYCACIENLNEVAKLPNYKFVKGDICSADLVNFVLETEEVDTIMHFAAQTHVDNSFGNSFQFTRNNIMGTHVLLEAAKVHSIKRFVHVSTDEVYGEGENMETEPMIEDHVLEPTNPYAATKAAAEFLVKSYHRSFQLPIIITRGNNVYGPHQFPEKLIPKFVNQLARGRPVTLHGTGANTRNFLYVEDVARAFDCILHKAAVGKIYNIGGCNERSNLSVAKELIRIM---------------------------GLSDNESSLI--------------------TFVPDRAFNDLRYTIDNSELAKLGWKELMSWEEGLATTVEWY-RKYSNRYKDIERALVAHPR 329          
BLAST of NO02G01660 vs. NCBI_GenBank
Match: XP_002291084.1 (dtdp-glucose 4,6-dehydratase [Thalassiosira pseudonana CCMP1335] >EED91191.1 dtdp-glucose 4,6-dehydratase [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 456.8 bits (1174), Expect = 8.400e-125
Identity = 233/388 (60.05%), Postives = 280/388 (72.16%), Query Frame = 0
Query:  104 ELQHTPKNILVTGGAGFIGSHVAILLAHKYPKYKIVVLDKLDYCASLDNLSEVNRRRNFKFVKGNICSSDLVNFVLEEEEIDTVLHLAAQTHVDNSFGNSFSFTQNNILGTHVLLESAKVH-GIKRFVHCSTDEVYGEG-TADQEPMFEDNVLEPTNPYAATKAGAEFLAKSYHRSFNLPVIITRGNNVYGPHQYPEKLIPKFINLLQRARPLTLHGNGLNTRNFLYVTDVAKAFDCVLHYGETGKIYNIGGTHEKTNVDVAKDLIRKMELLPSAADNVKAYPSAGDESAAQEKREGLDTSVSSAVAAAAWDLPKDDDDSAYGPYLTFVEDRPFNDLRYSINSEALRRLGWREEVSWEDGLAETIQWYIHKAQNRWGNIESALVPHPK 490
            E  + PKNIL+TGGAGFIGSHVAILLA KYP Y IVV DKLDYC+ L NL EV+R +NFKFVKG+I S DLV++V+ EE+IDTV+H AAQTHVDNSFGNSF+FTQ+NI GTHV+LE+AK H G+KRF+H STDEVYGEG T + E M E++VLEPTNPYAATKAGAEFL KSYHRSF LP +ITRGNNVYGPHQ+PEKLIPKF N + R RP+TLHG+G NTRNFLYV DVA+AF+ ++H    G IYNIGG +E +N++VAK LI   E+L             GD+                                     +TFV DR FNDLRY+INS  L +LGW+EE++WE+GL  T++WY  K  +R+GNIE ALV HP+
Sbjct:    8 ENDYIPKNILLTGGAGFIGSHVAILLAKKYPHYNIVVYDKLDYCSCLANLDEVSRLKNFKFVKGDITSPDLVSYVMVEEDIDTVMHFAAQTHVDNSFGNSFNFTQSNIYGTHVMLEAAKCHRGMKRFIHVSTDEVYGEGETFETEAMKEEHVLEPTNPYAATKAGAEFLVKSYHRSFKLPCVITRGNNVYGPHQFPEKLIPKFTNQILRGRPVTLHGDGSNTRNFLYVEDVARAFEVLVHKASPGMIYNIGGDNEISNLEVAKKLI---EIL-----------GKGDQ---------------------------------MDELITFVPDRKFNDLRYTINSGKLHKLGWKEEMNWEEGLRTTVEWYT-KYSDRFGNIEDALVAHPR 347          
BLAST of NO02G01660 vs. NCBI_GenBank
Match: CBN76510.1 (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 456.4 bits (1173), Expect = 1.100e-124
Identity = 226/362 (62.43%), Postives = 263/362 (72.65%), Query Frame = 0
Query:  107 HTPKNILVTGGAGFIGSHVAILLAHKYPKYKIVVLDKLDYCASLDNLSEVNRRRNFKFVKGNICSSDLVNFVLEEEEIDTVLHLAAQTHVDNSFGNSFSFTQNNILGTHVLLESAKVHGIKRFVHCSTDEVYGEGTADQEPMFEDNVLEPTNPYAATKAGAEFLAKSYHRSFNLPVIITRGNNVYGPHQYPEKLIPKFINLLQRARPLTLHGNGLNTRNFLYVTDVAKAFDCVLHYGETGKIYNIGGTHEKTNVDVAKDLIRKMELLPSAADNVKAYPSAGDESAAQEKREGLDTSVSSAVAAAAWDLPKDDDDSAYGPYLTFVEDRPFNDLRYSINSEALRRLGWREEVSWEDGLAETIQW 469
            +TP+NIL+TGGAGFI SH+ ILL  KYP+Y IVV D+LDYCA L+NL  + ++ N+KFVKGNICSSD+V +VL EE+IDT+LH AAQTHVDNSFGNSF FTQNNI GTHVLLESAK  GIKRFVH STDEVYGEG  DQEPMFEDNVLEPTNPYAATKAGAEF+AK+Y RSFNLPVIITRGNNVYGPHQYPEKLIPKFIN L R + LT+HG G N RNFL+V DVA AF+ +LH G  G IYNIGGT+E + + VA+DL+R                                           ++LP +D D A      F +DR FNDLRY+INS+ L  LGW+EE +WE GL ET++W
Sbjct:   21 YTPQNILITGGAGFIASHLVILLVEKYPQYNIVVFDRLDYCACLENLDCIAQKPNYKFVKGNICSSDMVTYVLREEKIDTILHFAAQTHVDNSFGNSFQFTQNNIYGTHVLLESAKKVGIKRFVHVSTDEVYGEGEHDQEPMFEDNVLEPTNPYAATKAGAEFIAKAYFRSFNLPVIITRGNNVYGPHQYPEKLIPKFINQLMRGKKLTIHGTGSNKRNFLHVADVATAFEKILHAGVEGSIYNIGGTNEHSVLKVARDLMR------------------------------------------IFELPSEDGDKA----TEFGDDRVFNDLRYTINSDKLAALGWKEEKTWEQGLKETVEW 336          
BLAST of NO02G01660 vs. NCBI_GenBank
Match: EJK47833.1 (hypothetical protein THAOC_33424 [Thalassiosira oceanica])

HSP 1 Score: 448.4 bits (1152), Expect = 3.000e-122
Identity = 231/397 (58.19%), Postives = 278/397 (70.03%), Query Frame = 0
Query:  104 ELQHTPKNILVTGGA---------GFIGSHVAILLAHKYPKYKIVVLDKLDYCASLDNLSEVNRRRNFKFVKGNICSSDLVNFVLEEEEIDTVLHLAAQTHVDNSFGNSFSFTQNNILGTHVLLESAKVH-GIKRFVHCSTDEVYGEG-TADQEPMFEDNVLEPTNPYAATKAGAEFLAKSYHRSFNLPVIITRGNNVYGPHQYPEKLIPKFINLLQRARPLTLHGNGLNTRNFLYVTDVAKAFDCVLHYGETGKIYNIGGTHEKTNVDVAKDLIRKMELLPSAADNVKAYPSAGDESAAQEKREGLDTSVSSAVAAAAWDLPKDDDDSAYGPYLTFVEDRPFNDLRYSINSEALRRLGWREEVSWEDGLAETIQWYIHKAQNRWGNIESALVPHPK 490
            E  + P+NIL+TGGA         GFIGSH AILLA KYP+Y ++V DKLDYC+ L NL E++R +NFKFVKG+ICS DLV++V+ EE++DTV+H AAQTHVDNSFGNSF+FTQ+NI GTHVLLESAK H  I+RF+H STDEVYGEG T + E M E++VLEPTNPYAATKAGAEFL KSYHRSF LP +ITRGNNVYGPHQ+PEKLIPKF N L R R +TLHG+G NTRNFLYV DVA+AF+ +LH    G+I NIGG +E +N+DVAK LI                    D    ++K E L                           ++FV DR FNDLRY+INS  L  LGW+EE+SWEDGL  T++WY  K  +R+GNIE ALV HP+
Sbjct:   10 ENDYIPRNILLTGGAGPLIIAETLGFIGSHAAILLAKKYPQYNVIVYDKLDYCSCLANLDEISRLKNFKFVKGDICSPDLVSYVMREEDVDTVMHFAAQTHVDNSFGNSFNFTQSNIYGTHVLLESAKNHKTIRRFIHVSTDEVYGEGETFETEAMKEEHVLEPTNPYAATKAGAEFLVKSYHRSFKLPCVITRGNNVYGPHQFPEKLIPKFTNQLLRGRQVTLHGDGSNTRNFLYVEDVARAFEVILHKASPGQILNIGGENEISNLDVAKTLI--------------------DILGMKDKEEEL---------------------------ISFVPDRKFNDLRYTINSGKLHELGWKEEMSWEDGLKTTVEWYT-KYTSRFGNIEDALVAHPR 358          
BLAST of NO02G01660 vs. NCBI_GenBank
Match: GAX23278.1 (dTDP-glucose 4,6-dehydratase [Fistulifera solaris])

HSP 1 Score: 446.8 bits (1148), Expect = 8.700e-122
Identity = 231/395 (58.48%), Postives = 275/395 (69.62%), Query Frame = 0
Query:   97 TIAGSGSELQHTPKNILVTGGAGFIGSHVAILLAHKYPKYKIVVLDKLDYCASLDNLSEVNRRRNFKFVKGNICSSDLVNFVLEEEEIDTVLHLAAQTHVDNSFGNSFSFTQNNILGTHVLLESAK-VHGIKRFVHCSTDEVYGEG-TADQEPMFEDNVLEPTNPYAATKAGAEFLAKSYHRSFNLPVIITRGNNVYGPHQYPEKLIPKFINLLQRARPLTLHGNGLNTRNFLYVTDVAKAFDCVLHYGETGKIYNIGGTHEKTNVDVAKDLIRKMELLPSAADNVKAYPSAGDESAAQEKREGLDTSVSSAVAAAAWDLPKDDDDSAYGPYLTFVEDRPFNDLRYSINSEALRRLGWREEVSWEDGLAETIQWYIHKAQNRWGNIESALVPHPK 490
            T A + SE  + P+NI++TGGAGFI SHVAILL  KYP+YKIVV D LDYCA L NL E+    NFKFVKG+I S DLV++VL+EE+IDT+LH AAQTHVDNSFGNSF+FTQ NI GTHVLLESAK    IKRFVH STDEVYGEG   D +PM E++VLEPTNPYAATKAGAEFL KSY RSF +P +ITRGNNVYGPHQ+PEKLIPKF N+L R  PLT+HG+G NTRNFLYVTDVA AFD ++H GE G +YNIGG +E  N+DVA+ L++                  G E   QE                                +TFV DR FNDLRY+INS  L  LGW+E ++WE+GL  T+ WY  +  +R+GNI++ALV HP+
Sbjct:    2 TTAAAASE-DYVPQNIMITGGAGFIASHVAILLCKKYPQYKIVVYDNLDYCACLANLQELFDAPNFKFVKGDITSPDLVSYVLKEEKIDTILHFAAQTHVDNSFGNSFAFTQTNIFGTHVLLESAKCCEYIKRFVHVSTDEVYGEGEDFDTDPMSEEHVLEPTNPYAATKAGAEFLVKSYFRSFKMPCLITRGNNVYGPHQFPEKLIPKFTNMLLRDIPLTIHGDGTNTRNFLYVTDVANAFDTIMHKGEPGHVYNIGGKNEIANIDVARALLKLF----------------GKEDREQE-------------------------------LITFVPDRKFNDLRYTINSNKLHELGWKELMNWEEGLKTTVDWY-KQYSHRYGNIDAALVAHPR 347          
BLAST of NO02G01660 vs. NCBI_GenBank
Match: GAX26571.1 (dTDP-glucose 4,6-dehydratase [Fistulifera solaris])

HSP 1 Score: 446.0 bits (1146), Expect = 1.500e-121
Identity = 231/395 (58.48%), Postives = 275/395 (69.62%), Query Frame = 0
Query:   97 TIAGSGSELQHTPKNILVTGGAGFIGSHVAILLAHKYPKYKIVVLDKLDYCASLDNLSEVNRRRNFKFVKGNICSSDLVNFVLEEEEIDTVLHLAAQTHVDNSFGNSFSFTQNNILGTHVLLESAK-VHGIKRFVHCSTDEVYGEG-TADQEPMFEDNVLEPTNPYAATKAGAEFLAKSYHRSFNLPVIITRGNNVYGPHQYPEKLIPKFINLLQRARPLTLHGNGLNTRNFLYVTDVAKAFDCVLHYGETGKIYNIGGTHEKTNVDVAKDLIRKMELLPSAADNVKAYPSAGDESAAQEKREGLDTSVSSAVAAAAWDLPKDDDDSAYGPYLTFVEDRPFNDLRYSINSEALRRLGWREEVSWEDGLAETIQWYIHKAQNRWGNIESALVPHPK 490
            T A + SE  + P+NI++TGGAGFI SHVAILL  KYP+YKIVV D LDYCA L NL E+    NFKFVKG+I S DLV++VL+EE+IDT+LH AAQTHVDNSFGNSF+FTQ NI GTHVLLESAK    IKRFVH STDEVYGEG   D +PM E++VLEPTNPYAATKAGAEFL KSY RSF +P +ITRGNNVYGPHQ+PEKLIPKF N+L R  PLT+HG+G NTRNFLYVTDVA AFD ++H GE G +YNIGG +E  N+DVA+ L++                  G E   QE                                +TFV DR FNDLRY+INS  L  LGW+E ++WE+GL  T+ WY  +  +R+GNI++ALV HP+
Sbjct:    2 TTAAAASE-DYVPQNIMITGGAGFIASHVAILLCKKYPQYKIVVYDNLDYCACLANLQELFDAPNFKFVKGDITSPDLVSYVLKEEKIDTILHFAAQTHVDNSFGNSFAFTQTNIFGTHVLLESAKCCEYIKRFVHVSTDEVYGEGEDFDTDPMSEEHVLEPTNPYAATKAGAEFLVKSYFRSFKMPCLITRGNNVYGPHQFPEKLIPKFTNMLLRDIPLTIHGDGTNTRNFLYVTDVANAFDTIMHKGEPGHVYNIGGKNEIANLDVARALLKLF----------------GKEDREQE-------------------------------LITFVPDRKFNDLRYTINSNKLHELGWKELMNWEEGLKTTVDWY-KQYSHRYGNIDAALVAHPR 347          
BLAST of NO02G01660 vs. NCBI_GenBank
Match: XP_002181238.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC47161.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 436.8 bits (1122), Expect = 9.000e-119
Identity = 243/476 (51.05%), Postives = 297/476 (62.39%), Query Frame = 0
Query:   20 IWG---KGDVQLRMGQASTRLRGPTRTTHRVLRRDHKASGLS-LSINLPVPLCPPPYPPAQPLNRTGIRPPSSPLTMNGMDTIAGSGSELQHTPKNILVTGGAGFIGSHVAILLAHKYPKYKIVVLDKLDYCASLDNLSEVNRRRNFKFVKGNICSSDLVNFVLEEEEIDTVLHLAAQTHVDNSFGNSFSFTQNNILGTHVLLESAK-VHGIKRFVHCSTDEVYGEG-TADQEPMFEDNVLEPTNPYAATKAGAEFLAKSYHRSFNLPVIITRGNNVYGPHQYPEKLIPKFINLLQRARPLTLHGNGLNTRNFLYVTDVAKAFDCVLHYGETGKIYNIGGTHEKTNVDVAKDLIRKMELLPSAADNVKAYPSAGDESAAQEKREGLDTSVSSAVAAAAWDLPKDDDDSAYGPYLTFVEDRPFNDLRYSINSEALRRLGWREEVSWEDGLAETIQWYIHKAQNRWGNIESALVPHPK 490
            +WG    G  +LR  Q         + T +  RRD  + G + L+++ P               R    P     TM   +    +     +TP+NILVTGGAGFI SHVAILL  KYP+YKIVV D LDYCA L NL E+    NFKFVKG+I S DLV++VL EE+IDT+LH AAQTHVDNSFGNSF+FTQ NI GTHVLLESAK    ++RFVH STDEVYGEG   + +PM E++VLEPTNPYAATKAGAEFL KSY RSF LP +ITRGNNVYGPHQ+PEKLIPKF N L +  PLT+HG+G NTRNFLYVTDVA AFD ++H G  G +YNIGG +E  N++VA+ L++                                           +D  K++D       + FV DR FNDLRY+INS  L  LGW E +SWE+GLA T+ WY  K  +R+GNI++ALV HP+
Sbjct:    4 VWGVDLPGGARLRPSQPHY-----AQETEKARRRDRHSLGTTPLAVHNPAD------------QRVSTHPLRKFCTMVETNGTKPTAPVEDYTPENILVTGGAGFIASHVAILLCKKYPQYKIVVYDCLDYCACLANLQELFDLPNFKFVKGDIASPDLVSYVLREEKIDTILHFAAQTHVDNSFGNSFAFTQTNIYGTHVLLESAKCCDTLRRFVHVSTDEVYGEGEDFETDPMSEEHVLEPTNPYAATKAGAEFLVKSYFRSFQLPCLITRGNNVYGPHQFPEKLIPKFTNQLLKNLPLTIHGDGSNTRNFLYVTDVANAFDIIMHKGTPGHVYNIGGKNEVPNLEVARALLK------------------------------------------LFDKEKEED-----TLIKFVPDRRFNDLRYTINSNKLHELGWTELMSWEEGLATTVDWY-KKYTSRYGNIDAALVAHPR 414          
The following BLAST results are available for this feature:
BLAST of NO02G01660 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM30544.13.800e-17875.30dTDP-glucose 4,6-dehydratase [Nannochloropsis gadi... [more]
XP_005854661.12.400e-14867.69dTDP-glucose 4,6-dehydratase [Nannochloropsis gadi... [more]
EWM28017.13.200e-14865.84rhamnose biosynthetic enzyme expressed [Nannochlor... [more]
XP_009035289.11.700e-12561.27hypothetical protein AURANDRAFT_23143, partial [Au... [more]
XP_002291084.18.400e-12560.05dtdp-glucose 4,6-dehydratase [Thalassiosira pseudo... [more]
CBN76510.11.100e-12462.43conserved unknown protein [Ectocarpus siliculosus][more]
EJK47833.13.000e-12258.19hypothetical protein THAOC_33424 [Thalassiosira oc... [more]
GAX23278.18.700e-12258.48dTDP-glucose 4,6-dehydratase [Fistulifera solaris][more]
GAX26571.11.500e-12158.48dTDP-glucose 4,6-dehydratase [Fistulifera solaris][more]
XP_002181238.19.000e-11951.05predicted protein [Phaeodactylum tricornutum CCAP ... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL016nonsL016Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR033ncniR033Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR032ncniR032Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR002ngnoR002Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR000ngnoR000Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK006788NSK006788Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO02G01660.1NO02G01660.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|574000gene_747Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100013g37gene172Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO02G01660.1NO02G01660.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO02G01660 ID=NO02G01660|Name=NO02G01660|organism=Nannochloropsis oceanica|type=gene|length=3555bp
GGAACAGGGGGATGAGGAGGAAGAGGAGGGGAAAGATGAAGAGGAGGAAG
GTGCAACGGATGAACGAGGGGCTATGGGCATTGATGAGGTGATGATGGTT
GGAGACGATGGTCGTGGACAGAGAGGTGTCGCGTCATGAGGTGGGGGCGT
GGGCAGGCTGCGTTCTGATGGTGCTGTCGTCACCGTCGTCGTTGTCGTCT
CCAGGTTGGCTGTCACGGTTGTCGCCACCTCTGATGCAACCTCTGGCACG
TGGGGAGTAGAAAGCCTCTCGTCACTTGAAGGGCTGCCATTGATATCCGG
TAACACTGTCAGCAGAGATAGCTTGAAGTCGTCTGGAGTAACCACCACGC
CTCCCTCCTGCCTCAATTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCC
TCCTTATCCTCTGCTATACCTCCCGTTTCCGACCCTGCCTTCGCGTCTCC
GATTGCTTCAGCTTCGCTGCCCATCACGAGGGGTAGAAGTGCGAGGGAGG
GCTGGCGCGTTGAGGTGGTGGCTGTACTCGACATCATGGCAGCACACAAG
GCTTCTATCCACTCAGTTCGTCCCTCAGGGGGCTCCGCCCGCAAAACGTA
AGTCCGGTCCTTGGCTGGTACCCACAATTCGAACACGCCATTATCGTCCT
CGTGAATGCCAACGCTGCAGATCGGCTCCAAGGCCAGGGAATCGTTCGGC
TTTTTGGGTTTTGTTTTCTTCTTGATCGAGTTAGATGACAAGGTGTGAGG
CTGGGTAGTATACCAGCTTAAGCGCGCCTCCCCGCCCTCCAAGACGAAAT
AGCGGCGATGCCACATAAGCTGCCGGGTAAAGAGGTGGCGGCGCGTGGTT
TGCTTGACAAGCCAACCCTCCTTGAGGGGCGCGGTGGGGGTGGTAGGGGT
TGCTTGCATGGTCGGAGGCGCGAGCCGCGATCTGGTAGAGGCCAGGAAGC
GGAGGAGGCAGACTATAAAAGGCGCAGATCCTGCCTGTCGTCGGCGTGAA
TGATTTGGGCGTGTGTTGGGCTGTGTTGTGCTGCGATGCGGTCTGTCGAT
ATGAGGCCGCCAAAAAAGGGGCGATTTTTGGCGAGACGGGGGGCTGCTTT
CTTCTTCTTTAAAAAAAAGTCCCCTCTTGTGCGCAAGCACAATGTCTGGC
GTGAATGGATAAGTGAAGTGATCAGAAATGTGGTAGTGCCACAGTAGGTA
AAAAGAAAGTCGTCCTCGTGAGGAGGGAAAAGTCCCAACATCATGAAAAT
TGAACTGTAACTATAGCTTCCAAGTTCTGAGTTACAACCCCACACAGGCC
TCACCAAATGCAGGCCAAGCTCGGCCACCATTTTCGTCACACCGCCCTGC
ATGTTGGCAGAGATCTTTGATGATGGTTCTGGGTTTGTGGAGACCCTTCA
CACCTTTATATGGGGCAAGGGAGACGTGCAGCTACGCATGGGCCAAGCAT
CGACGCGTCTACGAGGACCTACGCGAACCACACATCGCGTTTTAAGACGG
GATCACAAAGCAAGTGGCCTGTCACTATCCATCAACTTACCTGTTCCCCT
TTGTCCTCCCCCCTATCCACCCGCACAACCCCTCAACCGAACAGGCATCC
GTCCCCCTTCTTCCCCCTTGACAATGAACGGCATGGACACCATCGCGGGT
AGCGGCAGCGAGCTCCAGCATACGCCCAAAAACATCCTGGTCACCGGGGG
CGCGGGTTTCATgtacggttgggtggatatgcggggcaaggggctgacga
cacattacagcagctaatggatgtccctccttctttctctccttccccca
aacaccgtagCGGCTCACACGTGGCCATCTTGCTCGCGCACAAGTATCCC
AAGTACAAGATCGTGGTGCTAGACAAGTTGGATTgtaagtcttgtaggtt
tttacggcgtagggttctgcagtcgcttcctttgtgtcaaaagcgttgtg
ggtgtagagcgaggagagactatgctaggggcacacgtcgacaaagttgc
catgcggtatcccaggcatttacgcacacaccgcttcaaaagcctcacac
tatgcaattcaactttctccttcccaacctcttccacaaacaattagATT
GCGCGTCTTTGGACAACTTGTCTGAGGTCAACCGCCGCAGAAATTTCAAA
TTTGTCAAGGGAAATATATGTTCCTCCGACCTCGTCAATTTTGTGCTCGA
GGAAGAGGAGATCGACACGGTCCTCCACTTGGCGGCGCAGACACATGTCG
ATAATAGCTTCGGGAACAGCTTCTCGTTTACCCAGAATAATATTTTAGGA
ACCCATGTTTTGCTCGAGAGCGCGAAGGTCCACGGCATCAAGCGCTTTGT
TCATTGCTCGACAGATGAGGTTTATGGTGAGGGTACCGCGGACCAAGAGC
CCATGTTTGAGGACAATGTGCTTGAGgtaggaaagaatcttttgggaaag
cattgtgggaagagaaggagatgtaagccggggatcgtatgctttgaggg
agggtgtcttcgatatatatacatagggttagtgtgtgtgtgagtatgta
tgtatgtttgtctgtgtgggtgtgtccccttttacacattcaaaccattc
gtctcatttgtattacaacacagCCGACCAACCCCTACGCCGCTACCAAA
GCTGGTGCCGAGTTTTTGGCTAAATCATACCACCGCTCCTTCAACCTGCC
CGTCATCATCACGCGTGGTAATAACGTCTACGGCCCACACCAGTACCCCG
AGAAGCTCATCCCGAAGTTTATCAATTTGCTCCAGCGGGCGCGGCCATTG
ACGCTGCACGGCAACGGCCTCAACACGCGAAATTTTCTGTACGTGACCGA
TGTGGCAAAAGCTTTCGATTGCGTTTTACACTATGGCGAGACTGGCAAAA
TCTACAACATTGGTGGCACGCACGAGAAGACGAATGTGGATGTGGCCAAG
GATTTAATAAGAAAGATGGAACTTCTGCCCTCGGCTGCTGACAATGTGAA
GGCCTACCCGAGCGCTGGTGACGAGAGCGCAGCTCAGGAGAAGAGGGAGG
GGCTGGACACTTCGGTCTCTTCTGCTGTTGCCGCCGCCGCTTGGGACCTC
CCCAAGGACGATGATGATTCGGCTTACGGGCCCTATCTTACCTTTGTAGA
AGATCGACCCTTCAATGACTTGCGCTATTCTATCAACAGTGAGGCTCTGC
GGCGCTTAGGCTGGCGCGAGGAGGTATCTTGGGAGGATGGACTCGCTGAG
ACTATCCAGTGGTATATTCACAAGGCACAAAATCGTTGGGGCAATATCGA
ATCGGCCTTGGTCCCGCATCCAAAAGGTCCTCTGCCGGACGACGCGGCTT
AAGCGGTCTCACATGAATAATTGTTTGTAGGTGAGAGGGCATGGTCGATG
TGATTTGTTAGCAGTTGTCGGGTGAAATTGGGAATTATTTTTGTGAGAAG
GAAAGTGCCAAGGAGAAGGGCCGACGTTTGCACAAAGACGAAAATCAGCT
CTGGTAGGCAAGAAAGACGGAAGAAATAAAGAATTAGCAGGGAGATTTGG
GAAAT
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protein sequence of NO02G01660.1

>NO02G01660.1-protein ID=NO02G01660.1-protein|Name=NO02G01660.1|organism=Nannochloropsis oceanica|type=polypeptide|length=498bp
MLAEIFDDGSGFVETLHTFIWGKGDVQLRMGQASTRLRGPTRTTHRVLRR
DHKASGLSLSINLPVPLCPPPYPPAQPLNRTGIRPPSSPLTMNGMDTIAG
SGSELQHTPKNILVTGGAGFIGSHVAILLAHKYPKYKIVVLDKLDYCASL
DNLSEVNRRRNFKFVKGNICSSDLVNFVLEEEEIDTVLHLAAQTHVDNSF
GNSFSFTQNNILGTHVLLESAKVHGIKRFVHCSTDEVYGEGTADQEPMFE
DNVLEPTNPYAATKAGAEFLAKSYHRSFNLPVIITRGNNVYGPHQYPEKL
IPKFINLLQRARPLTLHGNGLNTRNFLYVTDVAKAFDCVLHYGETGKIYN
IGGTHEKTNVDVAKDLIRKMELLPSAADNVKAYPSAGDESAAQEKREGLD
TSVSSAVAAAAWDLPKDDDDSAYGPYLTFVEDRPFNDLRYSINSEALRRL
GWREEVSWEDGLAETIQWYIHKAQNRWGNIESALVPHPKGPLPDDAA*
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Synonyms
Publications