NO02G01640, NO02G01640 (gene) Nannochloropsis oceanica
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Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO02G01640 vs. NCBI_GenBank
Match: EWM30513.1 (thioredoxin [Nannochloropsis gaditana]) HSP 1 Score: 182.6 bits (462), Expect = 8.300e-43 Identity = 90/105 (85.71%), Postives = 98/105 (93.33%), Query Frame = 0
Query: 30 MVKIVGNKAEFDEVLASAGDKAVVVDFYATWCGPCKVIAPYYEELSKQFTNVVFIKVDVDENEEVASSAGISAMPTFQVYKNGKKVGELMGAAKDKLLALVEAHK 135
MVKIV NKAEF EVL SAG+KAV+VDF+ATWCGPCKVIAPY+EELS +F +VVFIKVDVDENEEVA+ AGISAMPTFQVYK+GKKVGELMGAAKDKLL LVEAHK
Sbjct: 1 MVKIVSNKAEFYEVLNSAGNKAVIVDFFATWCGPCKVIAPYFEELSTKFPDVVFIKVDVDENEEVAAFAGISAMPTFQVYKDGKKVGELMGAAKDKLLGLVEAHK 105
BLAST of NO02G01640 vs. NCBI_GenBank
Match: PRW57963.1 (Thioredoxin H-type [Chlorella sorokiniana]) HSP 1 Score: 145.6 bits (366), Expect = 1.100e-31 Identity = 71/103 (68.93%), Postives = 85/103 (82.52%), Query Frame = 0
Query: 31 VKIVGNKAEFDEVLASAGDKAVVVDFYATWCGPCKVIAPYYEELSKQFTNVVFIKVDVDENEEVASSAGISAMPTFQVYKNGKKVGELMGAAKDKLLALVEAH 134
V +V +KAE+DE LA+ K VVVDF ATWCGPC++I PY+EELS QF VVF+KVDVDE E+VA++ GISAMPTFQV+KNG KV EL+GAAKD+L ALVE H
Sbjct: 6 VIVVHSKAEWDEQLAANAGKTVVVDFTATWCGPCRMIGPYFEELSTQFEGVVFLKVDVDEVEQVAAACGISAMPTFQVWKNGAKVDELVGAAKDRLKALVEKH 108
BLAST of NO02G01640 vs. NCBI_GenBank
Match: AFM43654.1 (thioredoxin 1 [Mytilus galloprovincialis]) HSP 1 Score: 140.6 bits (353), Expect = 3.600e-30 Identity = 61/105 (58.10%), Postives = 87/105 (82.86%), Query Frame = 0
Query: 30 MVKIVGNKAEFDEVLASAGDKAVVVDFYATWCGPCKVIAPYYEELSKQFTNVVFIKVDVDENEEVASSAGISAMPTFQVYKNGKKVGELMGAAKDKLLALVEAHK 135
MVK++G+KAEFD V+ +GD +VVDF+ATWCGPC IAP Y++LS ++++ +F+KVDVDE E+VA+ +GISAMPTFQ YKNG KV E++GA+++KL ++E +K
Sbjct: 1 MVKVIGSKAEFDGVVKGSGDTLIVVDFFATWCGPCVQIAPVYQKLSDEYSDCIFLKVDVDEVEDVAAESGISAMPTFQCYKNGNKVDEIVGASEEKLRGMIEKNK 105
BLAST of NO02G01640 vs. NCBI_GenBank
Match: XP_013902637.1 (Thioredoxin H-type [Monoraphidium neglectum] >KIZ03618.1 Thioredoxin H-type [Monoraphidium neglectum]) HSP 1 Score: 137.9 bits (346), Expect = 2.300e-29 Identity = 64/100 (64.00%), Postives = 80/100 (80.00%), Query Frame = 0
Query: 34 VGNKAEFDEVLASAGDKAVVVDFYATWCGPCKVIAPYYEELSKQFTNVVFIKVDVDENEEVASSAGISAMPTFQVYKNGKKVGELMGAAKDKLLALVEAH 134
VG+KAE+D+ LA AGDKA++VDF A WCGPC+ I PY+ +LS QF ++VF+KVDVD N EVA + GISAMPTFQV+K+ KV E +GA+KDKLLAL H
Sbjct: 9 VGSKAEWDKQLADAGDKAIIVDFTAVWCGPCQAIGPYFVQLSTQFEDLVFLKVDVDANSEVAGACGISAMPTFQVFKHRAKVDEFIGASKDKLLALCTKH 108
BLAST of NO02G01640 vs. NCBI_GenBank
Match: XP_023654104.1 (thioredoxin [Paramormyrops kingsleyae]) HSP 1 Score: 137.1 bits (344), Expect = 4.000e-29 Identity = 62/104 (59.62%), Postives = 80/104 (76.92%), Query Frame = 0
Query: 30 MVKIVGNKAEFDEVLASAGDKAVVVDFYATWCGPCKVIAPYYEELSKQFTNVVFIKVDVDENEEVASSAGISAMPTFQVYKNGKKVGELMGAAKDKLLALVEAH 134
MV+ + N+A+FD+ L AG K VV+DF ATWCGPCK IAP +++LS + NVVF+KVDVDE ++VASS G+S MPTFQ YKNG K+GE GA K+KL +V+ H
Sbjct: 1 MVREINNQADFDKTLKDAGQKLVVIDFTATWCGPCKAIAPIFQKLSDDYQNVVFLKVDVDEAQDVASSCGVSCMPTFQFYKNGVKIGEFSGADKNKLEEMVKKH 104
BLAST of NO02G01640 vs. NCBI_GenBank
Match: XP_011397516.1 (Thioredoxin H-type [Auxenochlorella protothecoides] >KFM24628.1 Thioredoxin H-type [Auxenochlorella protothecoides]) HSP 1 Score: 134.0 bits (336), Expect = 3.400e-28 Identity = 62/105 (59.05%), Postives = 88/105 (83.81%), Query Frame = 0
Query: 31 VKIVGNKAEFDEVL--ASAGDKAVVVDFYATWCGPCKVIAPYYEELSKQFTNVVFIKVDVDENEEVASSAGISAMPTFQVYKNGKKVGELMGAAKDKLLALVEAH 134
V +V +KAE+D+VL A KAV+VDF+ATWCGPC++I+PY++ELS + +VVF+K+DVD+ EEVA + GI+AMPTFQV+++G+KV EL+GA+KDKL +LVE +
Sbjct: 6 VVVVNSKAEWDQVLNEAKNSGKAVIVDFFATWCGPCRLISPYFQELSSNYDDVVFVKLDVDQVEEVAQALGITAMPTFQVFQSGEKVDELIGASKDKLKSLVEKY 110
BLAST of NO02G01640 vs. NCBI_GenBank
Match: XP_005837151.1 (hypothetical protein GUITHDRAFT_85403 [Guillardia theta CCMP2712] >EKX50171.1 hypothetical protein GUITHDRAFT_85403 [Guillardia theta CCMP2712]) HSP 1 Score: 131.7 bits (330), Expect = 1.700e-27 Identity = 58/101 (57.43%), Postives = 78/101 (77.23%), Query Frame = 0
Query: 33 IVGNKAEFDEVLASAGDKAVVVDFYATWCGPCKVIAPYYEELSKQFTNVVFIKVDVDENEEVASSAGISAMPTFQVYKNGKKVGELMGAAKDKLLALVEAH 134
++ + EFD+ L SAG K VV+DF+ATWCGPCK+I+P++ ELS+++ +VVF KVDVD+NEE A S GISAMPTFQ YKNG V + GA+K+ LL ++ H
Sbjct: 5 VLNTRKEFDDCLKSAGSKLVVIDFFATWCGPCKIISPFFHELSEKYPHVVFAKVDVDQNEETAQSCGISAMPTFQFYKNGNLVHTMRGASKEGLLQGIQEH 105
BLAST of NO02G01640 vs. NCBI_GenBank
Match: 2YPM_A (Chain A, Crystal Structure Of Ancestral Thioredoxin Relative To Last Animal And Fungi Common Ancestor (lafca) From The Precambrian Period) HSP 1 Score: 131.0 bits (328), Expect = 2.900e-27 Identity = 67/105 (63.81%), Postives = 84/105 (80.00%), Query Frame = 0
Query: 30 MVKIVGNKAEFDEVLASAGDKAVVVDFYATWCGPCKVIAPYYEELSKQF-TNVVFIKVDVDENEEVASSAGISAMPTFQVYKNGKKVGELMGAAKDKLLALVEAH 134
MV V NK EF+ +L+ A DK VVVDF ATWCGPCK+IAP +EELS+++ NVVF+KVDVDE E+VA+ GISAMPTFQ +KNGKKV EL GA ++KL A+++ H
Sbjct: 1 MVIQVTNKDEFESILSEA-DKLVVVDFTATWCGPCKMIAPKFEELSEEYPDNVVFLKVDVDEVEDVAAEYGISAMPTFQFFKNGKKVDELTGANQEKLKAMIKKH 104
BLAST of NO02G01640 vs. NCBI_GenBank
Match: OXA59052.1 (Thioredoxin-2 [Folsomia candida]) HSP 1 Score: 130.2 bits (326), Expect = 4.900e-27 Identity = 63/111 (56.76%), Postives = 80/111 (72.07%), Query Frame = 0
Query: 24 PAINSIMVKIVGNKAEFDEVLASAGDKAVVVDFYATWCGPCKVIAPYYEELSKQFTNVVFIKVDVDENEEVASSAGISAMPTFQVYKNGKKVGELMGAAKDKLLALVEAHK 135
PA ++ V +K++FD L AG+K VVVDFYATWCGPCK++AP EE++ FT+V+F+KVDVDENEEVAS GIS MPTF KNG+KV E GA DK+ L+ +K
Sbjct: 51 PASIMSLIHSVQDKSDFDTQLKDAGNKLVVVDFYATWCGPCKMVAPKLEEMAALFTDVIFLKVDVDENEEVASEYGISCMPTFIFIKNGEKVSEFSGANADKIKELIGTNK 161
BLAST of NO02G01640 vs. NCBI_GenBank
Match: XP_013876492.1 (PREDICTED: thioredoxin-like [Austrofundulus limnaeus]) HSP 1 Score: 129.8 bits (325), Expect = 6.400e-27 Identity = 64/101 (63.37%), Postives = 77/101 (76.24%), Query Frame = 0
Query: 30 MVKIVGNKAEFDEVLASAGDKAVVVDFYATWCGPCKVIAPYYEELSKQFTNVVFIKVDVDENEEVASSAGISAMPTFQVYKNGKKVGELMGAAKDKLLALV 131
MV+ + +K EFD VL+ AG K VVVDF ATWCGPCK IAP+ +EL KQFT+V+FIKVDVD+ +V+SS GIS MPTFQ YKN +KV E GA +D L A V
Sbjct: 1 MVRHIESKDEFDGVLSGAGGKLVVVDFTATWCGPCKAIAPFLDELEKQFTDVIFIKVDVDDVPDVSSSCGISCMPTFQFYKNXQKVFEFSGANRDTLKAKV 101 The following BLAST results are available for this feature:
BLAST of NO02G01640 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO02G01640 ID=NO02G01640|Name=NO02G01640|organism=Nannochloropsis oceanica|type=gene|length=1257bpback to top protein sequence of NO02G01640.1 >NO02G01640.1-protein ID=NO02G01640.1-protein|Name=NO02G01640.1|organism=Nannochloropsis oceanica|type=polypeptide|length=135bpback to top Synonyms
Publications
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