NO02G01610, NO02G01610 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO02G01610 vs. NCBI_GenBank
Match: EWM30487.1 (short-chain dehydrogenase reductase family protein [Nannochloropsis gaditana] >EWM30488.1 short-chain dehydrogenase reductase family protein [Nannochloropsis gaditana]) HSP 1 Score: 419.1 bits (1076), Expect = 1.300e-113 Identity = 199/315 (63.17%), Postives = 252/315 (80.00%), Query Frame = 0 Query: 20 LLFPLLLVLLLPHLTQAFTPRISAVVTGGNRGLGLATAELLAEMGYRVILTARNVEEGQAHVMDIQKRHGQDRCEFVPLDVSQPESIQTLMAHLKQDKELREGMPHLWINNAGICVRDEDEAAAVDGSGGREGVYQRTLDVNAWGPVALMDACLPGMQKRGFGCVINISSGDGELAYLHSLVAKRLREMKSKGTLRQYANRVASNQEQGLWPKGGGLAPVPWPAYCFSKSVLNTATRLMHAQTQETAAEAGRNRL-RLRVLALCPGDVATSMCDDDAVVDAVSPREAALDVVWAALHPDECPGGFFYRHRRMIPW 334 + FP+LL +LL L FTPRI+AVVTGGNRGLGLA ++LLAE+GY VILTARN EEGQA V DIQ+RHGQ+RCEF+ LDVS+P+SI+ + +K+++E+R G+PH+ INNAGICVRDED AAAV+GSGGREGVY+ D+N W PVALM+ACLPGM K GFGC++NISSGDGELAYLHS VAKRL+ ++S L+Q+++ VA Q++G WP+G GLAPV WPAY FSK+VLN ATRL+ ++ ++ + R + R++A+CPGDV T+MCD+ A DA+SP +AALDVVWA LH EC GG+FYR RR IPW Sbjct: 1 MAFPVLLFVLLFPLVHGFTPRITAVVTGGNRGLGLAISDLLAEVGYHVILTARNAEEGQARVADIQRRHGQNRCEFMALDVSEPKSIKAFVDQMKRNEEMRGGVPHVLINNAGICVRDEDAAAAVEGSGGREGVYRSVFDINTWAPVALMEACLPGMCKHGFGCIVNISSGDGELAYLHSEVAKRLKRVRSLAELKQFSDWVAQMQQEGPWPRGEGLAPVSWPAYSFSKAVLNAATRLLQSRVDALVSKDMKVRAHQPRIVAICPGDVNTAMCDEHAAHDALSPEQAALDVVWAVLHSKECHGGYFYRARRAIPW 315
BLAST of NO02G01610 vs. NCBI_GenBank
Match: XP_005856211.1 (short-chain dehydrogenase reductase family protein [Nannochloropsis gaditana CCMP526] >EKU20161.1 short-chain dehydrogenase reductase family protein [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 413.7 bits (1062), Expect = 5.500e-112 Identity = 196/315 (62.22%), Postives = 253/315 (80.32%), Query Frame = 0 Query: 20 LLFPLLLVLLLPHLTQAFTPRISAVVTGGNRGLGLATAELLAEMGYRVILTARNVEEGQAHVMDIQKRHGQDRCEFVPLDVSQPESIQTLMAHLKQDKELREGMPHLWINNAGICVRDEDEAAAVDGSGGREGVYQRTLDVNAWGPVALMDACLPGMQKRGFGCVINISSGDGELAYLHSLVAKRLREMKSKGTLRQYANRVASNQEQGLWPKGGGLAPVPWPAYCFSKSVLNTATRLMHAQTQETAAEAGRNRL-RLRVLALCPGDVATSMCDDDAVVDAVSPREAALDVVWAALHPDECPGGFFYRHRRMIPW 334 ++FP+LL +LL L FTPRI+AVVTGGNRGLGLA ++LLAE+GY VILTARN EEGQA V DIQ+RHGQ+RCEF+ LDVS+P+SI+ + +K+++E+R G+PH+ INNAGICVRDED AAAV+GSGGREGVY+ D+N W PVAL++ACLPGM K GFGC++NISSGDGELAYLHS VAKRL+ ++S L+Q+++ VA Q++G WP+G GLAPV WPAY FSK+VLN AT+L+ ++ ++ + R + R++A+CPGDV T+MCD+ A +A+SP +AALDVVWA LH EC GG+FYR RR IPW Sbjct: 1 MVFPVLLFVLLFPLFHGFTPRITAVVTGGNRGLGLAISDLLAEVGYHVILTARNAEEGQARVADIQRRHGQNRCEFMALDVSEPKSIKAFVDQMKRNEEMRGGVPHVLINNAGICVRDEDAAAAVEGSGGREGVYRSVFDINTWAPVALIEACLPGMCKHGFGCIVNISSGDGELAYLHSEVAKRLKRVRSLAELKQFSDWVAQMQQEGPWPRGEGLAPVSWPAYSFSKAVLNAATQLLQSRVDALISKDMKVRAHQPRIVAICPGDVNTAMCDEHAAHNALSPEQAALDVVWAVLHSKECHGGYFYRARRAIPW 315
BLAST of NO02G01610 vs. NCBI_GenBank
Match: CBN76148.1 (short-chain dehydrogenase/reductase SDR [Ectocarpus siliculosus]) HSP 1 Score: 134.4 bits (337), Expect = 6.400e-28 Identity = 108/365 (29.59%), Postives = 165/365 (45.21%), Query Frame = 0 Query: 42 SAVVTGGNRGLGLATAELLAEMG-YRVILTARNVEEGQAHVMDIQKRHGQDR------------CEFVPLDVSQPESIQTLMAHLKQDKELREGMPHLWINNAGICVRDEDEAAAVDGSGGREGVYQRTLDVNAWGPVALMDACLPGMQKRG----------------------------FGCVINISSGDGELAYLHS------LVAKRLREMKS-------------KGTLRQYANRVASNQEQGLWPKGGGLAPVPWPAYCFSKSVLNTATR----LMHAQT------QETAAEAGRNRLRLRVLALCPGDVATSMCDDDAVV--DAVSPREAALDVVWAAL-HPDECPGGFFYRHRRMIPW 334 + +VTG NRGLG A A+ + ++G YRV+L RN +EG+ + ++ + Q R F PLDV+ P S++ G + NNAG+C ++D + G+ + TL VN +G + +++AC+P +Q V+ ISSGDGEL +L S A+ L ++KS T +Q + A +Q++G + +A P PAY SK+ +N A R + A T + T + G +R++A+CPGDV T M + + DAVSP EAA++VV AL ++ P G FYRH I W Sbjct: 55 NVIVTGANRGLGFAIADRMLKLGSYRVVLACRNEQEGRDALERLRGKQQQRRQRQYGTIATNFLASFFPLDVTCPRSVEVFREDCVNGH--LGGRVDILFNNAGVCFPEQDGNGPQNNRAAAAGILRETLAVNFFGALEVVEACVPALQAAAPMVARKXXXXXXXXLEDNGATSTMTSLKPPTVVWISSGDGELCFLGSKWRGLLAEAQSLEDVKSPLSDLLATATDTITTTSKQNSTAPAGSQQEGEQGQVEEMAFGPTPAYSLSKAAVNAAVRTWAPCIQAPTVPAEAPENTKSRTGVRGGGVRLVAVCPGDVLTRMTSKEEMARGDAVSPEEAAVEVVDLALSSANDIPAGRFYRHGEEIGW 417
BLAST of NO02G01610 vs. NCBI_GenBank
Match: WP_106880730.1 (SDR family NAD(P)-dependent oxidoreductase [filamentous cyanobacterium CCP5] >PSN19303.1 short-chain dehydrogenase [filamentous cyanobacterium CCP5]) HSP 1 Score: 131.7 bits (330), Expect = 4.200e-27 Identity = 92/291 (31.62%), Postives = 137/291 (47.08%), Query Frame = 0 Query: 43 AVVTGGNRGLGLATAELLAEMGYRVILTARNVEEGQAHVMDIQKRHGQDRCEFVPLDVSQPESIQTLMAHLKQDKELREGMPHLWINNAGICVRDEDEAAAVDGSGGREGVYQRTLDVNAWGPVALMDACLPGMQKRGFGCVINISSGDGELAYLHSLVAKRLREMKSKGTLRQYANRVASNQEQGLWPKGGGLAPVPWPAYCFSKSVLNTATRLMHAQTQETAAEAGRNRLRLRVLALCPGDVATSMCDDDAVVDAVSPREAALDVVWAALHPDECPGGFFYRHRRMIPW 334 A+VTGGNRGLG ATA+ LA+ G +V++ +R E G+A +Q++ G D + L V+ I+ L Q E + G + INNAGI + + G + L+ N +GP++L C+P MQ G+G ++N+SSG G+L + GGG PAY SK+ LN+ TR++ A+ + T ++V ++CPG V T M +A +P E A + W A PD+ P G F+R R IPW Sbjct: 8 ALVTGGNRGLGFATAQQLAQAGMKVLIGSREAENGEAAAQSLQQQ-GLDVLAY-QLSVTDRGGIKV----LAQLIETKFGRLDVLINNAGIYPDSDGDTLLTTNLGS----IREALETNTYGPISLCQTCVPLMQANGYGRIVNVSSGMGQLNDM-----------------------------------GGGS-----PAYRLSKTALNSVTRILAAELEGT---------NIKVNSVCPGWVQTDMGGSEA---PRTPAEGADTIAWLAQIPDDAPSGLFWRDRTPIPW 236
BLAST of NO02G01610 vs. NCBI_GenBank
Match: WP_027483399.1 (SDR family oxidoreductase [Deinococcus pimensis]) HSP 1 Score: 128.3 bits (321), Expect = 4.600e-26 Identity = 98/292 (33.56%), Postives = 137/292 (46.92%), Query Frame = 0 Query: 43 AVVTGGNRGLGLATAELLAEMGYRVILTARNVEEGQAHVMDIQKRHGQDRCEFVPLDVSQPESIQTL-MAHLKQDKELREGMPHLWINNAGICVRDEDEAAAVDGSGGREGVYQRTLDVNAWGPVALMDACLPGMQKRGFGCVINISSGDGELAYLHSLVAKRLREMKSKGTLRQYANRVASNQEQGLWPKGGGLAPVPWPAYCFSKSVLNTATRLMHAQTQETAAEAGRNRLRLRVLALCPGDVATSMCDDDAVVDAVSPREAALDVVWAALHPDECPGGFFYRHRRMIPW 334 A+VTGGNRG+GL LA G V+L AR+ E G+ + R G + FVPLDV+ S+ L AH + D + +NNA + + ++ +A ++ G Y+ +L+VN GP+AL A +PGM++RG G V+N+SSG G+L+ + GG A PAY SK+ LN TRL+ A AG R+ V ++ PG V T M A S + A VVW A P+ P G FY RR +PW Sbjct: 7 ALVTGGNRGIGLEVCRQLAARGLHVLLAARDEERGERAAESL--RAGGGQVAFVPLDVADEASVHALARAHPRVD---------VLVNNAAVLLGEDGDALSIP-----LGAYRESLEVNFLGPLALCQAFVPGMRERGHGRVVNVSSGAGQLSGM------------------------------------GGYA----PAYSASKAALNALTRLV--------AHAGGR--RVLVNSVDPGWVRTDMGGQSA---PRSVEQGADTVVWLATLPEGGPSGGFYHDRRPVPW 229
BLAST of NO02G01610 vs. NCBI_GenBank
Match: WP_011140297.1 (SDR family NAD(P)-dependent oxidoreductase [Gloeobacter violaceus] >NP_923239.1 carbonyl reductase [Gloeobacter violaceus PCC 7421] >BAC88234.1 glr0293 [Gloeobacter violaceus PCC 7421]) HSP 1 Score: 127.1 bits (318), Expect = 1.000e-25 Identity = 100/297 (33.67%), Postives = 139/297 (46.80%), Query Frame = 0 Query: 37 FTPRISAVVTGGNRGLGLATAELLAEMGYRVILTARNVEEGQAHVMDIQKRHGQDRCEFVPLDVSQPESIQTLMAHLKQDKELREGMPHLWINNAGICVRDEDEAAAVDGSGGREGVYQRTLDVNAWGPVALMDACLPGMQKRGFGCVINISSGDGELAYLHSLVAKRLREMKSKGTLRQYANRVASNQEQGLWPKGGGLAPVPWPAYCFSKSVLNTATRLMHAQTQETAAEAGRNRLRLRVLALCPGDVATSMCDDDAVVDAVSPREAALDVVWAALHPDECPGGFFYRHRRMIPW 334 F + AVVTGGNRG+G + LA G+RVILT+R+ E+G+ +Q G D F PLDV+ P S + L +++ R G + +NNAGI +AA + + + T + N GPV + A +P MQ G G V+N+SSG G+LA + G G +PAY SK+ LN TR++ + +T ++ V ALCPG V T M A A +P + A VVW A PD P G F+R R+ IPW Sbjct: 9 FMDKKLAVVTGGNRGIGFEVSRQLANFGHRVILTSRDPEQGKTAAEKLQS-EGLD-VLFHPLDVTDPASAEALAGFVRE----RFGRLDILVNNAGILQDGGADAARL--LDADLDMLRTTFETNTLGPVLVAHALVPLMQ--GRGRVVNVSSGAGQLADM-----------------------------------GSG-----YPAYRVSKTALNAVTRILANELADT---------KILVNALCPGWVKTDMGGPGA---ARTPEQGADTVVWLATLPDNGPTGGFFRDRKPIPW 243
BLAST of NO02G01610 vs. NCBI_GenBank
Match: WP_013323238.1 (SDR family NAD(P)-dependent oxidoreductase [Cyanothece sp. PCC 7822] >ADN15145.1 short-chain dehydrogenase/reductase SDR [Cyanothece sp. PCC 7822]) HSP 1 Score: 126.3 bits (316), Expect = 1.700e-25 Identity = 82/291 (28.18%), Postives = 141/291 (48.45%), Query Frame = 0 Query: 43 AVVTGGNRGLGLATAELLAEMGYRVILTARNVEEGQAHVMDIQKRHGQDRCEFVPLDVSQPESIQTLMAHLKQDKELREGMPHLWINNAGICVRDEDEAAAVDGSGGREGVYQRTLDVNAWGPVALMDACLPGMQKRGFGCVINISSGDGELAYLHSLVAKRLREMKSKGTLRQYANRVASNQEQGLWPKGGGLAPVPWPAYCFSKSVLNTATRLMHAQTQETAAEAGRNRLRLRVLALCPGDVATSMCDDDAVVDAVSPREAALDVVWAALHPDECPGGFFYRHRRMIPW 334 AVVTG NRGLG + LA+ G V+LT+R+ ++G A +Q + + + PLDV+ P+SI+ L +K + G + +NNAG+ + ++++ ++ + +++++ N +GP+ + +P M+ +G V+N+SSG G+L + GGG +P Y SK+ +N TR++ + + T + V + CPG V T M DA +P++ A +VW A+ PD P G FYR R+++PW Sbjct: 8 AVVTGANRGLGFEASRQLAKNGIHVVLTSRDEDKGIAAAEKLQSE--KLKVTYHPLDVTNPDSIELLGKFIKD----QFGRLDILVNNAGVLIGSAEDSSVLN---AKIDTIRKSMETNVYGPLLVSQTLIPIMRVHNYGRVVNVSSGMGQLTNM-----------------------------------GGG-----YPGYRLSKTSINAVTRILADELKGT---------NILVNSACPGWVKTEMGGPDA---TRTPQQGADTIVWLAMLPDGSPSGGFYRDRKLLPW 237
BLAST of NO02G01610 vs. NCBI_GenBank
Match: WP_068470963.1 (SDR family NAD(P)-dependent oxidoreductase [Parachlamydia sp. C2]) HSP 1 Score: 125.9 bits (315), Expect = 2.300e-25 Identity = 96/292 (32.88%), Postives = 137/292 (46.92%), Query Frame = 0 Query: 43 AVVTGGNRGLGLATAELLAEMGYRVILTARNVEEGQAHVMDIQKRHGQDRCEFVPLDVSQPESIQTLMAHLKQDKELREGMPHLWINNAGICV-RDEDEAAAVDGSGGREGVYQRTLDVNAWGPVALMDACLPGMQKRGFGCVINISSGDGELAYLHSLVAKRLREMKSKGTLRQYANRVASNQEQGLWPKGGGLAPVPWPAYCFSKSVLNTATRLMHAQTQETAAEAGRNRLRLRVLALCPGDVATSMCDDDAVVDAVSPREAALDVVWAALHPDECPGGFFYRHRRMIPW 334 A+VTGGNRGLGL T LA+ GY+VIL +R+ E+G+ ++ + G E + LD+S +SI +L ++Q R G + +NNA I + +D+ A D R V + TL+VN G L + +P M K G+G ++N+SSG G+L+ HS A AY SK+ LN T + AQT+ G N L V ++CPG V T M + A S E +VWA+ PD P G F+R + I W Sbjct: 7 ALVTGGNRGLGLGTCRELAQAGYQVILASRDEEKGRIKAQELNR--GGLSVEAMLLDISNSDSIASLHRQIEQ----RWGRLDVLVNNAAILIDKDDAHQAEEDAFKQRRRVLEETLNVNVAGAYDLCNRFVPLMLKNGYGRIVNVSSGLGQLSDPHSNFA----------------------------------------AYSISKTALNMVTCIFAAQTK------GSNVL---VNSVCPGWVKTDMGGEQA---PRSIEEGISGIVWASTLPDHGPSGGFFRDGKPIDW 240
BLAST of NO02G01610 vs. NCBI_GenBank
Match: WP_047855406.1 (SDR family NAD(P)-dependent oxidoreductase [Archangium gephyra] >AKJ00627.1 Short-chain dehydrogenase/reductase SDR [Archangium gephyra]) HSP 1 Score: 125.2 bits (313), Expect = 3.900e-25 Identity = 103/297 (34.68%), Postives = 140/297 (47.14%), Query Frame = 0 Query: 42 SAVVTGGNRGLGLATAELLAEMGYRVILTARNVEEGQAHVMDIQKRHGQDRCEFVPLDVSQPESIQTLMAHLKQDKELREGMPHLWINNAGICVRDEDEAAAVDGSGGREGVYQRTLDVNAWGPVALMDACLPGMQKRGFGCVINISSGDGELAYLHSLVAKRLREMKSKGTLRQYANRVASNQEQGLWPKGGGLAPVPWP--AYCFSKSVLNTATRLMHAQTQETAAEAGRNRLRLRVLALCPGDVATSMCDDDAVVDAVSPR---EAALDVVWAALHPDECPGGFFYRHRRMIPW 334 +A+VTGGNRGLGL L +G RV+LTAR++ EG + G D F PLDV+ ES+ L+ L++ + +NNAG+ + D V +RT+ VN GP+ L + LP +++ G ++ +SSG GEL L + +R K L + G + + G WP AY SK LN TRL+ AE + R L V A+CPG V T M A PR E A +VWAA P E P G F+R+RR IPW Sbjct: 7 TALVTGGNRGLGLEVCRQLGRLGMRVLLTARDIAEGAKATASLH-AEGLD-VVFEPLDVTSAESLDKLVDRLERQGTRLAAL----VNNAGLAMEGFD-----------ANVAERTVAVNFLGPLHLTERLLPLLEEH--GRIVMVSSGVGELEGLSPALRQRFDPPPPKEELVALLQTFVEDVRSGQYAQKG------WPGSAYRVSKVGLNALTRLL--------AEELKPR-HLLVNAVCPGWVKTRMGGSHA------PRGVEEGADTIVWAATLPPEGPSGGFFRNRRAIPW 263
BLAST of NO02G01610 vs. NCBI_GenBank
Match: OGO11249.1 (short-chain dehydrogenase [Chloroflexi bacterium RBG_13_66_10]) HSP 1 Score: 125.2 bits (313), Expect = 3.900e-25 Identity = 95/291 (32.65%), Postives = 135/291 (46.39%), Query Frame = 0 Query: 43 AVVTGGNRGLGLATAELLAEMGYRVILTARNVEEGQAHVMDIQKRHGQDRCEFVPLDVSQPESIQTLMAHLKQDKELREGMPHLWINNAGICVRDEDEAAAVDGSGGREGVYQRTLDVNAWGPVALMDACLPGMQKRGFGCVINISSGDGELAYLHSLVAKRLREMKSKGTLRQYANRVASNQEQGLWPKGGGLAPVPWPAYCFSKSVLNTATRLMHAQTQETAAEAGRNRLRLRVLALCPGDVATSMCDDDAVVDAVSPREAALDVVWAALHPDECPGGFFYRHRRMIPW 334 AVVTG NRG+GL LA G+RV+LTAR +EG+ D+ G D F PLDV++P +Q L + ++ + + + +NNA + + D A V + TL VN +GP+ LM A LP M+K G V+NISS G LA + S G +A P+Y SK+ LN TR++ A+ + ++V A+CPG V T M DA SP + A +W A+ P P G F+R R+ +PW Sbjct: 5 AVVTGANRGIGLEIVRQLAHEGFRVVLTARRPQEGR-KATDLFTSDGLD-VIFRPLDVTKPVQVQALRDFIAEEFDRLD----VLVNNAAVYLDDGVTALEVPLE-----TVEATLRVNLYGPLLLMRALLPLMKKHKHGRVVNISSEAGSLAGMRS----------------------------------GAIA----PSYSISKAALNALTRIVSAEVR---------GYDIKVNAMCPGWVRTDMGGRDA---PRSPEKGAETAIWLAMLPASGPSGKFFRDRKPVPW 234 The following BLAST results are available for this feature:
BLAST of NO02G01610 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO02G01610 ID=NO02G01610|Name=NO02G01610|organism=Nannochloropsis oceanica|type=gene|length=1002bpback to top protein sequence of NO02G01610.1 >NO02G01610.1-protein ID=NO02G01610.1-protein|Name=NO02G01610.1|organism=Nannochloropsis oceanica|type=polypeptide|length=334bpback to top Synonyms
Publications
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