NO02G01610, NO02G01610 (gene) Nannochloropsis oceanica

Overview
NameNO02G01610
Unique NameNO02G01610
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1002
Alignment locationchr2:471321..472322 -

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Properties
Property NameValue
DescriptionShort-chain dehydrogenase reductase family protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr2genomechr2:471321..472322 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR036291NAD(P)-bd_dom_sf
IPR002347Glc/ribitol_DH
Homology
BLAST of NO02G01610 vs. NCBI_GenBank
Match: EWM30487.1 (short-chain dehydrogenase reductase family protein [Nannochloropsis gaditana] >EWM30488.1 short-chain dehydrogenase reductase family protein [Nannochloropsis gaditana])

HSP 1 Score: 419.1 bits (1076), Expect = 1.300e-113
Identity = 199/315 (63.17%), Postives = 252/315 (80.00%), Query Frame = 0
Query:   20 LLFPLLLVLLLPHLTQAFTPRISAVVTGGNRGLGLATAELLAEMGYRVILTARNVEEGQAHVMDIQKRHGQDRCEFVPLDVSQPESIQTLMAHLKQDKELREGMPHLWINNAGICVRDEDEAAAVDGSGGREGVYQRTLDVNAWGPVALMDACLPGMQKRGFGCVINISSGDGELAYLHSLVAKRLREMKSKGTLRQYANRVASNQEQGLWPKGGGLAPVPWPAYCFSKSVLNTATRLMHAQTQETAAEAGRNRL-RLRVLALCPGDVATSMCDDDAVVDAVSPREAALDVVWAALHPDECPGGFFYRHRRMIPW 334
            + FP+LL +LL  L   FTPRI+AVVTGGNRGLGLA ++LLAE+GY VILTARN EEGQA V DIQ+RHGQ+RCEF+ LDVS+P+SI+  +  +K+++E+R G+PH+ INNAGICVRDED AAAV+GSGGREGVY+   D+N W PVALM+ACLPGM K GFGC++NISSGDGELAYLHS VAKRL+ ++S   L+Q+++ VA  Q++G WP+G GLAPV WPAY FSK+VLN ATRL+ ++     ++  + R  + R++A+CPGDV T+MCD+ A  DA+SP +AALDVVWA LH  EC GG+FYR RR IPW
Sbjct:    1 MAFPVLLFVLLFPLVHGFTPRITAVVTGGNRGLGLAISDLLAEVGYHVILTARNAEEGQARVADIQRRHGQNRCEFMALDVSEPKSIKAFVDQMKRNEEMRGGVPHVLINNAGICVRDEDAAAAVEGSGGREGVYRSVFDINTWAPVALMEACLPGMCKHGFGCIVNISSGDGELAYLHSEVAKRLKRVRSLAELKQFSDWVAQMQQEGPWPRGEGLAPVSWPAYSFSKAVLNAATRLLQSRVDALVSKDMKVRAHQPRIVAICPGDVNTAMCDEHAAHDALSPEQAALDVVWAVLHSKECHGGYFYRARRAIPW 315          
BLAST of NO02G01610 vs. NCBI_GenBank
Match: XP_005856211.1 (short-chain dehydrogenase reductase family protein [Nannochloropsis gaditana CCMP526] >EKU20161.1 short-chain dehydrogenase reductase family protein [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 413.7 bits (1062), Expect = 5.500e-112
Identity = 196/315 (62.22%), Postives = 253/315 (80.32%), Query Frame = 0
Query:   20 LLFPLLLVLLLPHLTQAFTPRISAVVTGGNRGLGLATAELLAEMGYRVILTARNVEEGQAHVMDIQKRHGQDRCEFVPLDVSQPESIQTLMAHLKQDKELREGMPHLWINNAGICVRDEDEAAAVDGSGGREGVYQRTLDVNAWGPVALMDACLPGMQKRGFGCVINISSGDGELAYLHSLVAKRLREMKSKGTLRQYANRVASNQEQGLWPKGGGLAPVPWPAYCFSKSVLNTATRLMHAQTQETAAEAGRNRL-RLRVLALCPGDVATSMCDDDAVVDAVSPREAALDVVWAALHPDECPGGFFYRHRRMIPW 334
            ++FP+LL +LL  L   FTPRI+AVVTGGNRGLGLA ++LLAE+GY VILTARN EEGQA V DIQ+RHGQ+RCEF+ LDVS+P+SI+  +  +K+++E+R G+PH+ INNAGICVRDED AAAV+GSGGREGVY+   D+N W PVAL++ACLPGM K GFGC++NISSGDGELAYLHS VAKRL+ ++S   L+Q+++ VA  Q++G WP+G GLAPV WPAY FSK+VLN AT+L+ ++     ++  + R  + R++A+CPGDV T+MCD+ A  +A+SP +AALDVVWA LH  EC GG+FYR RR IPW
Sbjct:    1 MVFPVLLFVLLFPLFHGFTPRITAVVTGGNRGLGLAISDLLAEVGYHVILTARNAEEGQARVADIQRRHGQNRCEFMALDVSEPKSIKAFVDQMKRNEEMRGGVPHVLINNAGICVRDEDAAAAVEGSGGREGVYRSVFDINTWAPVALIEACLPGMCKHGFGCIVNISSGDGELAYLHSEVAKRLKRVRSLAELKQFSDWVAQMQQEGPWPRGEGLAPVSWPAYSFSKAVLNAATQLLQSRVDALISKDMKVRAHQPRIVAICPGDVNTAMCDEHAAHNALSPEQAALDVVWAVLHSKECHGGYFYRARRAIPW 315          
BLAST of NO02G01610 vs. NCBI_GenBank
Match: CBN76148.1 (short-chain dehydrogenase/reductase SDR [Ectocarpus siliculosus])

HSP 1 Score: 134.4 bits (337), Expect = 6.400e-28
Identity = 108/365 (29.59%), Postives = 165/365 (45.21%), Query Frame = 0
Query:   42 SAVVTGGNRGLGLATAELLAEMG-YRVILTARNVEEGQAHVMDIQKRHGQDR------------CEFVPLDVSQPESIQTLMAHLKQDKELREGMPHLWINNAGICVRDEDEAAAVDGSGGREGVYQRTLDVNAWGPVALMDACLPGMQKRG----------------------------FGCVINISSGDGELAYLHS------LVAKRLREMKS-------------KGTLRQYANRVASNQEQGLWPKGGGLAPVPWPAYCFSKSVLNTATR----LMHAQT------QETAAEAGRNRLRLRVLALCPGDVATSMCDDDAVV--DAVSPREAALDVVWAAL-HPDECPGGFFYRHRRMIPW 334
            + +VTG NRGLG A A+ + ++G YRV+L  RN +EG+  +  ++ +  Q R              F PLDV+ P S++              G   +  NNAG+C  ++D     +      G+ + TL VN +G + +++AC+P +Q                                  V+ ISSGDGEL +L S        A+ L ++KS               T +Q +   A +Q++G   +   +A  P PAY  SK+ +N A R     + A T      + T +  G     +R++A+CPGDV T M   + +   DAVSP EAA++VV  AL   ++ P G FYRH   I W
Sbjct:   55 NVIVTGANRGLGFAIADRMLKLGSYRVVLACRNEQEGRDALERLRGKQQQRRQRQYGTIATNFLASFFPLDVTCPRSVEVFREDCVNGH--LGGRVDILFNNAGVCFPEQDGNGPQNNRAAAAGILRETLAVNFFGALEVVEACVPALQAAAPMVARKXXXXXXXXLEDNGATSTMTSLKPPTVVWISSGDGELCFLGSKWRGLLAEAQSLEDVKSPLSDLLATATDTITTTSKQNSTAPAGSQQEGEQGQVEEMAFGPTPAYSLSKAAVNAAVRTWAPCIQAPTVPAEAPENTKSRTGVRGGGVRLVAVCPGDVLTRMTSKEEMARGDAVSPEEAAVEVVDLALSSANDIPAGRFYRHGEEIGW 417          
BLAST of NO02G01610 vs. NCBI_GenBank
Match: WP_106880730.1 (SDR family NAD(P)-dependent oxidoreductase [filamentous cyanobacterium CCP5] >PSN19303.1 short-chain dehydrogenase [filamentous cyanobacterium CCP5])

HSP 1 Score: 131.7 bits (330), Expect = 4.200e-27
Identity = 92/291 (31.62%), Postives = 137/291 (47.08%), Query Frame = 0
Query:   43 AVVTGGNRGLGLATAELLAEMGYRVILTARNVEEGQAHVMDIQKRHGQDRCEFVPLDVSQPESIQTLMAHLKQDKELREGMPHLWINNAGICVRDEDEAAAVDGSGGREGVYQRTLDVNAWGPVALMDACLPGMQKRGFGCVINISSGDGELAYLHSLVAKRLREMKSKGTLRQYANRVASNQEQGLWPKGGGLAPVPWPAYCFSKSVLNTATRLMHAQTQETAAEAGRNRLRLRVLALCPGDVATSMCDDDAVVDAVSPREAALDVVWAALHPDECPGGFFYRHRRMIPW 334
            A+VTGGNRGLG ATA+ LA+ G +V++ +R  E G+A    +Q++ G D   +  L V+    I+     L Q  E + G   + INNAGI    + +       G      +  L+ N +GP++L   C+P MQ  G+G ++N+SSG G+L  +                                   GGG      PAY  SK+ LN+ TR++ A+ + T          ++V ++CPG V T M   +A     +P E A  + W A  PD+ P G F+R R  IPW
Sbjct:    8 ALVTGGNRGLGFATAQQLAQAGMKVLIGSREAENGEAAAQSLQQQ-GLDVLAY-QLSVTDRGGIKV----LAQLIETKFGRLDVLINNAGIYPDSDGDTLLTTNLGS----IREALETNTYGPISLCQTCVPLMQANGYGRIVNVSSGMGQLNDM-----------------------------------GGGS-----PAYRLSKTALNSVTRILAAELEGT---------NIKVNSVCPGWVQTDMGGSEA---PRTPAEGADTIAWLAQIPDDAPSGLFWRDRTPIPW 236          
BLAST of NO02G01610 vs. NCBI_GenBank
Match: WP_027483399.1 (SDR family oxidoreductase [Deinococcus pimensis])

HSP 1 Score: 128.3 bits (321), Expect = 4.600e-26
Identity = 98/292 (33.56%), Postives = 137/292 (46.92%), Query Frame = 0
Query:   43 AVVTGGNRGLGLATAELLAEMGYRVILTARNVEEGQAHVMDIQKRHGQDRCEFVPLDVSQPESIQTL-MAHLKQDKELREGMPHLWINNAGICVRDEDEAAAVDGSGGREGVYQRTLDVNAWGPVALMDACLPGMQKRGFGCVINISSGDGELAYLHSLVAKRLREMKSKGTLRQYANRVASNQEQGLWPKGGGLAPVPWPAYCFSKSVLNTATRLMHAQTQETAAEAGRNRLRLRVLALCPGDVATSMCDDDAVVDAVSPREAALDVVWAALHPDECPGGFFYRHRRMIPW 334
            A+VTGGNRG+GL     LA  G  V+L AR+ E G+     +  R G  +  FVPLDV+   S+  L  AH + D         + +NNA + + ++ +A ++       G Y+ +L+VN  GP+AL  A +PGM++RG G V+N+SSG G+L+ +                                    GG A    PAY  SK+ LN  TRL+        A AG    R+ V ++ PG V T M    A     S  + A  VVW A  P+  P G FY  RR +PW
Sbjct:    7 ALVTGGNRGIGLEVCRQLAARGLHVLLAARDEERGERAAESL--RAGGGQVAFVPLDVADEASVHALARAHPRVD---------VLVNNAAVLLGEDGDALSIP-----LGAYRESLEVNFLGPLALCQAFVPGMRERGHGRVVNVSSGAGQLSGM------------------------------------GGYA----PAYSASKAALNALTRLV--------AHAGGR--RVLVNSVDPGWVRTDMGGQSA---PRSVEQGADTVVWLATLPEGGPSGGFYHDRRPVPW 229          
BLAST of NO02G01610 vs. NCBI_GenBank
Match: WP_011140297.1 (SDR family NAD(P)-dependent oxidoreductase [Gloeobacter violaceus] >NP_923239.1 carbonyl reductase [Gloeobacter violaceus PCC 7421] >BAC88234.1 glr0293 [Gloeobacter violaceus PCC 7421])

HSP 1 Score: 127.1 bits (318), Expect = 1.000e-25
Identity = 100/297 (33.67%), Postives = 139/297 (46.80%), Query Frame = 0
Query:   37 FTPRISAVVTGGNRGLGLATAELLAEMGYRVILTARNVEEGQAHVMDIQKRHGQDRCEFVPLDVSQPESIQTLMAHLKQDKELREGMPHLWINNAGICVRDEDEAAAVDGSGGREGVYQRTLDVNAWGPVALMDACLPGMQKRGFGCVINISSGDGELAYLHSLVAKRLREMKSKGTLRQYANRVASNQEQGLWPKGGGLAPVPWPAYCFSKSVLNTATRLMHAQTQETAAEAGRNRLRLRVLALCPGDVATSMCDDDAVVDAVSPREAALDVVWAALHPDECPGGFFYRHRRMIPW 334
            F  +  AVVTGGNRG+G   +  LA  G+RVILT+R+ E+G+     +Q   G D   F PLDV+ P S + L   +++    R G   + +NNAGI      +AA +        + + T + N  GPV +  A +P MQ  G G V+N+SSG G+LA +                                   G G     +PAY  SK+ LN  TR++  +  +T         ++ V ALCPG V T M    A   A +P + A  VVW A  PD  P G F+R R+ IPW
Sbjct:    9 FMDKKLAVVTGGNRGIGFEVSRQLANFGHRVILTSRDPEQGKTAAEKLQS-EGLD-VLFHPLDVTDPASAEALAGFVRE----RFGRLDILVNNAGILQDGGADAARL--LDADLDMLRTTFETNTLGPVLVAHALVPLMQ--GRGRVVNVSSGAGQLADM-----------------------------------GSG-----YPAYRVSKTALNAVTRILANELADT---------KILVNALCPGWVKTDMGGPGA---ARTPEQGADTVVWLATLPDNGPTGGFFRDRKPIPW 243          
BLAST of NO02G01610 vs. NCBI_GenBank
Match: WP_013323238.1 (SDR family NAD(P)-dependent oxidoreductase [Cyanothece sp. PCC 7822] >ADN15145.1 short-chain dehydrogenase/reductase SDR [Cyanothece sp. PCC 7822])

HSP 1 Score: 126.3 bits (316), Expect = 1.700e-25
Identity = 82/291 (28.18%), Postives = 141/291 (48.45%), Query Frame = 0
Query:   43 AVVTGGNRGLGLATAELLAEMGYRVILTARNVEEGQAHVMDIQKRHGQDRCEFVPLDVSQPESIQTLMAHLKQDKELREGMPHLWINNAGICVRDEDEAAAVDGSGGREGVYQRTLDVNAWGPVALMDACLPGMQKRGFGCVINISSGDGELAYLHSLVAKRLREMKSKGTLRQYANRVASNQEQGLWPKGGGLAPVPWPAYCFSKSVLNTATRLMHAQTQETAAEAGRNRLRLRVLALCPGDVATSMCDDDAVVDAVSPREAALDVVWAALHPDECPGGFFYRHRRMIPW 334
            AVVTG NRGLG   +  LA+ G  V+LT+R+ ++G A    +Q    + +  + PLDV+ P+SI+ L   +K     + G   + +NNAG+ +   ++++ ++    +    +++++ N +GP+ +    +P M+   +G V+N+SSG G+L  +                                   GGG     +P Y  SK+ +N  TR++  + + T          + V + CPG V T M   DA     +P++ A  +VW A+ PD  P G FYR R+++PW
Sbjct:    8 AVVTGANRGLGFEASRQLAKNGIHVVLTSRDEDKGIAAAEKLQSE--KLKVTYHPLDVTNPDSIELLGKFIKD----QFGRLDILVNNAGVLIGSAEDSSVLN---AKIDTIRKSMETNVYGPLLVSQTLIPIMRVHNYGRVVNVSSGMGQLTNM-----------------------------------GGG-----YPGYRLSKTSINAVTRILADELKGT---------NILVNSACPGWVKTEMGGPDA---TRTPQQGADTIVWLAMLPDGSPSGGFYRDRKLLPW 237          
BLAST of NO02G01610 vs. NCBI_GenBank
Match: WP_068470963.1 (SDR family NAD(P)-dependent oxidoreductase [Parachlamydia sp. C2])

HSP 1 Score: 125.9 bits (315), Expect = 2.300e-25
Identity = 96/292 (32.88%), Postives = 137/292 (46.92%), Query Frame = 0
Query:   43 AVVTGGNRGLGLATAELLAEMGYRVILTARNVEEGQAHVMDIQKRHGQDRCEFVPLDVSQPESIQTLMAHLKQDKELREGMPHLWINNAGICV-RDEDEAAAVDGSGGREGVYQRTLDVNAWGPVALMDACLPGMQKRGFGCVINISSGDGELAYLHSLVAKRLREMKSKGTLRQYANRVASNQEQGLWPKGGGLAPVPWPAYCFSKSVLNTATRLMHAQTQETAAEAGRNRLRLRVLALCPGDVATSMCDDDAVVDAVSPREAALDVVWAALHPDECPGGFFYRHRRMIPW 334
            A+VTGGNRGLGL T   LA+ GY+VIL +R+ E+G+    ++ +  G    E + LD+S  +SI +L   ++Q    R G   + +NNA I + +D+   A  D    R  V + TL+VN  G   L +  +P M K G+G ++N+SSG G+L+  HS  A                                        AY  SK+ LN  T +  AQT+      G N L   V ++CPG V T M  + A     S  E    +VWA+  PD  P G F+R  + I W
Sbjct:    7 ALVTGGNRGLGLGTCRELAQAGYQVILASRDEEKGRIKAQELNR--GGLSVEAMLLDISNSDSIASLHRQIEQ----RWGRLDVLVNNAAILIDKDDAHQAEEDAFKQRRRVLEETLNVNVAGAYDLCNRFVPLMLKNGYGRIVNVSSGLGQLSDPHSNFA----------------------------------------AYSISKTALNMVTCIFAAQTK------GSNVL---VNSVCPGWVKTDMGGEQA---PRSIEEGISGIVWASTLPDHGPSGGFFRDGKPIDW 240          
BLAST of NO02G01610 vs. NCBI_GenBank
Match: WP_047855406.1 (SDR family NAD(P)-dependent oxidoreductase [Archangium gephyra] >AKJ00627.1 Short-chain dehydrogenase/reductase SDR [Archangium gephyra])

HSP 1 Score: 125.2 bits (313), Expect = 3.900e-25
Identity = 103/297 (34.68%), Postives = 140/297 (47.14%), Query Frame = 0
Query:   42 SAVVTGGNRGLGLATAELLAEMGYRVILTARNVEEGQAHVMDIQKRHGQDRCEFVPLDVSQPESIQTLMAHLKQDKELREGMPHLWINNAGICVRDEDEAAAVDGSGGREGVYQRTLDVNAWGPVALMDACLPGMQKRGFGCVINISSGDGELAYLHSLVAKRLREMKSKGTLRQYANRVASNQEQGLWPKGGGLAPVPWP--AYCFSKSVLNTATRLMHAQTQETAAEAGRNRLRLRVLALCPGDVATSMCDDDAVVDAVSPR---EAALDVVWAALHPDECPGGFFYRHRRMIPW 334
            +A+VTGGNRGLGL     L  +G RV+LTAR++ EG      +    G D   F PLDV+  ES+  L+  L++       +    +NNAG+ +   D             V +RT+ VN  GP+ L +  LP +++   G ++ +SSG GEL  L   + +R      K  L         +   G + + G      WP  AY  SK  LN  TRL+        AE  + R  L V A+CPG V T M    A      PR   E A  +VWAA  P E P G F+R+RR IPW
Sbjct:    7 TALVTGGNRGLGLEVCRQLGRLGMRVLLTARDIAEGAKATASLH-AEGLD-VVFEPLDVTSAESLDKLVDRLERQGTRLAAL----VNNAGLAMEGFD-----------ANVAERTVAVNFLGPLHLTERLLPLLEEH--GRIVMVSSGVGELEGLSPALRQRFDPPPPKEELVALLQTFVEDVRSGQYAQKG------WPGSAYRVSKVGLNALTRLL--------AEELKPR-HLLVNAVCPGWVKTRMGGSHA------PRGVEEGADTIVWAATLPPEGPSGGFFRNRRAIPW 263          
BLAST of NO02G01610 vs. NCBI_GenBank
Match: OGO11249.1 (short-chain dehydrogenase [Chloroflexi bacterium RBG_13_66_10])

HSP 1 Score: 125.2 bits (313), Expect = 3.900e-25
Identity = 95/291 (32.65%), Postives = 135/291 (46.39%), Query Frame = 0
Query:   43 AVVTGGNRGLGLATAELLAEMGYRVILTARNVEEGQAHVMDIQKRHGQDRCEFVPLDVSQPESIQTLMAHLKQDKELREGMPHLWINNAGICVRDEDEAAAVDGSGGREGVYQRTLDVNAWGPVALMDACLPGMQKRGFGCVINISSGDGELAYLHSLVAKRLREMKSKGTLRQYANRVASNQEQGLWPKGGGLAPVPWPAYCFSKSVLNTATRLMHAQTQETAAEAGRNRLRLRVLALCPGDVATSMCDDDAVVDAVSPREAALDVVWAALHPDECPGGFFYRHRRMIPW 334
            AVVTG NRG+GL     LA  G+RV+LTAR  +EG+    D+    G D   F PLDV++P  +Q L   + ++ +  +    + +NNA + + D   A  V          + TL VN +GP+ LM A LP M+K   G V+NISS  G LA + S                                  G +A    P+Y  SK+ LN  TR++ A+ +            ++V A+CPG V T M   DA     SP + A   +W A+ P   P G F+R R+ +PW
Sbjct:    5 AVVTGANRGIGLEIVRQLAHEGFRVVLTARRPQEGR-KATDLFTSDGLD-VIFRPLDVTKPVQVQALRDFIAEEFDRLD----VLVNNAAVYLDDGVTALEVPLE-----TVEATLRVNLYGPLLLMRALLPLMKKHKHGRVVNISSEAGSLAGMRS----------------------------------GAIA----PSYSISKAALNALTRIVSAEVR---------GYDIKVNAMCPGWVRTDMGGRDA---PRSPEKGAETAIWLAMLPASGPSGKFFRDRKPVPW 234          
The following BLAST results are available for this feature:
BLAST of NO02G01610 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM30487.11.300e-11363.17short-chain dehydrogenase reductase family protein... [more]
XP_005856211.15.500e-11262.22short-chain dehydrogenase reductase family protein... [more]
CBN76148.16.400e-2829.59short-chain dehydrogenase/reductase SDR [Ectocarpu... [more]
WP_106880730.14.200e-2731.62SDR family NAD(P)-dependent oxidoreductase [filame... [more]
WP_027483399.14.600e-2633.56SDR family oxidoreductase [Deinococcus pimensis][more]
WP_011140297.11.000e-2533.67SDR family NAD(P)-dependent oxidoreductase [Gloeob... [more]
WP_013323238.11.700e-2528.18SDR family NAD(P)-dependent oxidoreductase [Cyanot... [more]
WP_068470963.12.300e-2532.88SDR family NAD(P)-dependent oxidoreductase [Parach... [more]
WP_047855406.13.900e-2534.68SDR family NAD(P)-dependent oxidoreductase [Archan... [more]
OGO11249.13.900e-2532.65short-chain dehydrogenase [Chloroflexi bacterium R... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL016nonsL016Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR033ncniR033Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR032ncniR032Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR002ngnoR002Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR000ngnoR000Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK006781NSK006781Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO02G01610.1NO02G01610.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|573970gene_741Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100013g45gene165Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO02G01610.1NO02G01610.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO02G01610 ID=NO02G01610|Name=NO02G01610|organism=Nannochloropsis oceanica|type=gene|length=1002bp
ATGCATCTGCAGCGGCGCCGGAGGAACTGTCTCGCCCCGCCCACACCGTT
TCCTCTCCTCCTCTTCCCCCTCCTCCTCGTCCTCCTCCTCCCCCACTTGA
CCCAGGCCTTTACGCCCCGCATCAGCGCCGTGGTCACGGGCGGCAATCGA
GGACTGGGCCTGGCCACGGCCGAATTATTGGCTGAAATGGGCTACCGTGT
CATTCTAACGGCGCGCAACGTGGAGGAAGGCCAGGCGCACGTCATGGACA
TTCAGAAGCGGCATGGGCAAGATCGATGTGAATTTGTGCCTTTGGACGTG
AGCCAGCCAGAAAGCATCCAGACTTTGATGGCACACTTGAAGCAGGACAA
GGAGCTGCGGGAAGGCATGCCGCATTTATGGATCAATAACGCAGGGATCT
GCGTGCGTGACGAAGACGAAGCAGCGGCAGTAGATGGGAGCGGAGGGAGG
GAAGGCGTGTATCAGCGCACGCTGGACGTTAATGCGTGGGGACCCGTAGC
ACTGATGGACGCATGTTTGCCAGGCATGCAAAAACGTGGGTTTGGATGTG
TCATTAACATCTCGAGCGGGGATGGTGAGTTGGCATATTTGCACAGTCTG
GTGGCCAAGCGCCTAAGGGAGATGAAAAGCAAGGGAACGCTACGTCAGTA
CGCCAACCGAGTGGCAAGCAATCAGGAGCAAGGCCTCTGGCCAAAAGGGG
GAGGCCTGGCGCCTGTGCCATGGCCGGCGTATTGCTTTTCGAAATCGGTA
CTAAATACAGCGACACGCTTGATGCACGCCCAGACACAGGAGACTGCGGC
AGAGGCTGGCAGGAATAGACTTCGGCTGCGGGTGTTGGCGTTGTGCCCGG
GGGATGTTGCGACGAGTATGTGCGATGATGATGCTGTGGTTGATGCTGTG
TCACCGAGGGAAGCGGCCTTGGACGTGGTGTGGGCGGCGCTGCACCCGGA
CGAATGTCCAGGAGGATTTTTTTATCGGCATCGACGAATGATACCCTGGT
GA
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protein sequence of NO02G01610.1

>NO02G01610.1-protein ID=NO02G01610.1-protein|Name=NO02G01610.1|organism=Nannochloropsis oceanica|type=polypeptide|length=334bp
MHLQRRRRNCLAPPTPFPLLLFPLLLVLLLPHLTQAFTPRISAVVTGGNR
GLGLATAELLAEMGYRVILTARNVEEGQAHVMDIQKRHGQDRCEFVPLDV
SQPESIQTLMAHLKQDKELREGMPHLWINNAGICVRDEDEAAAVDGSGGR
EGVYQRTLDVNAWGPVALMDACLPGMQKRGFGCVINISSGDGELAYLHSL
VAKRLREMKSKGTLRQYANRVASNQEQGLWPKGGGLAPVPWPAYCFSKSV
LNTATRLMHAQTQETAAEAGRNRLRLRVLALCPGDVATSMCDDDAVVDAV
SPREAALDVVWAALHPDECPGGFFYRHRRMIPW*
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Synonyms
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