NO02G01560, NO02G01560 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO02G01560 vs. NCBI_GenBank
Match: EWM30471.1 (short-chain dehydrogenase [Nannochloropsis gaditana]) HSP 1 Score: 479.6 bits (1233), Expect = 9.000e-132 Identity = 242/354 (68.36%), Postives = 297/354 (83.90%), Query Frame = 0 Query: 2 KLPGLGSWQAIGAGVVAASLFAGPLREIYLYVPPLTAAVAGFSVLPHGGLAQRVILATMGGMSASAFGYHQSRRKLPACPLLPPGEKELALVTGASSGIGREISLELAKKGFGLVLVARRADKLNELAADIQMTSEPTLQNKIPVHIVSADLTKPDAAQHLFNTVVLEKGLRVTALINNAGLGHTESFINMSISKIEEIIHLNTLALTTLTRLFGSEMAKRGRGRIMSVSSIAGAAPGPLVAVYSATKAFVTSFTLAIQHELEPLGVSITNLVPGATFTEFQGRAEAHAAMAFSMPGLAMSADRVARAGVKGMLRGDSIVIPGVVNQGFVLATAIFPAKLMRMVTQMAWSEMPM 356 K+ G GSWQA+GAG++A SL AGP R+I LYVPP+TA + G++ LPHGGL QR++L TMG +SA AFG+H RR+ P CP L GE+ELAL+TGASSGIGREISLELA++GFG++LVARRADKL ELA+DI+ + +P+HIV ADL+ P+AA+ ++ +VV EKGL+V+AL+NNAG+G+T+SF+ M +KIEEI+HLN L+LT L LFG EMA RGRGRIM VSSIAGAAPGPLVAVYSA+KAFV+SFTLAIQHELEP GVS+TNL+PGATFTEFQ RA A AA AFS+PGLAM ADRVAR GV GMLRGDS+V+PG+VNQ FVLATA+ P KL+R+VT +AWSE+P+ Sbjct: 5 KIAGPGSWQALGAGLLAISLVAGPSRQIQLYVPPVTALLCGYAALPHGGLGQRIVLGTMGALSAGAFGFHHLRRRHPICPALSQGEEELALITGASSGIGREISLELARRGFGVILVARRADKLQELASDIRALLADR-KRMVPIHIVPADLSCPEAARRVYESVVREKGLQVSALVNNAGVGYTDSFLKMPTAKIEEIVHLNALSLTQLCWLFGQEMASRGRGRIMCVSSIAGAAPGPLVAVYSASKAFVSSFTLAIQHELEPGGVSVTNLLPGATFTEFQARAHAQAAAAFSVPGLAMPADRVAREGVTGMLRGDSVVVPGLVNQAFVLATAVLPPKLLRLVTSLAWSEVPI 357
BLAST of NO02G01560 vs. NCBI_GenBank
Match: WP_107137008.1 (SDR family NAD(P)-dependent oxidoreductase [Deinococcus sp. OD32] >PTA69149.1 short-chain dehydrogenase [Deinococcus sp. OD32]) HSP 1 Score: 184.1 bits (466), Expect = 7.800e-43 Identity = 117/251 (46.61%), Postives = 154/251 (61.35%), Query Frame = 0 Query: 90 LALVTGASSGIGREISLELAKKGFGLVLVARRADKLNELAADIQMTSEPTLQNKIPVHIVSADLTKPDAAQHLFNTVVLEKGLRVTALINNAGLGHTESFINMSISKIEEIIHLNTLALTTLTRLFGSEMAKRGRGRIMSVSSIAGAAPGPLVAVYSATKAFVTSFTLAIQHELEPLGVSITNLVPGATFTEFQGRAEAHAAMAFSMP-GLAM-SADRVARAGVKGMLRGDSIVIPGVVNQGFVLATAIFP 339 LALVTGASSGIG ++ LA G LVLVAR A +L LA ++Q Q+ I VH++ ADL +P AA HL N + +GL L+NNAGLG + F++ + I +I LN ALT LTRL M +GRGRI++V+S A PGPL+A Y A+KA+V S + A+ EL P GVS+T L PG T FQ + + P LAM SA++VARAG+ MLRG ++VIPG +NQ + A + P Sbjct: 7 LALVTGASSGIGEHLARGLAAHGAHLVLVARSAGRLQALAQELQQ------QHGIQVHVLPADLAQPGAAAHLTNE-LRARGLHPDILVNNAGLGTFDEFLHQTPEAISGLIALNITALTELTRLLAPHMVAQGRGRILNVASTAAFQPGPLMAAYYASKAYVLSLSEALNEELRPSGVSVTALCPGPVETGFQAASGLGRSQLLRGPVRLAMLSAEQVARAGLDAMLRGQAVVIPGRINQLQIAALRLLP 250
BLAST of NO02G01560 vs. NCBI_GenBank
Match: GBD87949.1 (D-beta-hydroxybutyrate dehydrogenase [bacterium BMS3Abin03]) HSP 1 Score: 178.3 bits (451), Expect = 4.300e-41 Identity = 104/251 (41.43%), Postives = 156/251 (62.15%), Query Frame = 0 Query: 91 ALVTGASSGIGREISLELAKKGFGLVLVARRADKLNELAADIQMTSEPTLQNKIPVHIVSADLTKPDAAQHLFNTVVLEKGLRVTALINNAGLGHTESFINMSISKIEEIIHLNTLALTTLTRLFGSEMAKRGRGRIMSVSSIAGAAPGPLVAVYSATKAFVTSFTLAIQHELEPLGVSITNLVPGATFTEFQGRAEAHAAMAFSMPGLAMSADRVARAGVKGMLRGDSIVIPGVVNQGFVLATAIFPAKL 342 AL+TGASSGIG E++ AK G+ LVLVAR KLN Q+ SE + ++ I V ++ DL+KP AA+ +FN V E + + L+NNAG G + N K +E++ +N ++L LT LF +M KRG G+I++V+S A PGP++A Y A+K+FV S++ AI EL+ GV ++ L PG T TEFQ RA F L M+A++VA+ G KG+++G ++I G+ N+ +++ PAK+ Sbjct: 6 ALITGASSGIGYELAKIFAKDGYNLVLVARNEQKLN------QLKSELSGKHNITVKVLPKDLSKPHAAEEIFNEVKNE-SISIDVLVNNAGFGIFNDYWNTDYKKEQEMLQVNIMSLARLTNLFAKDMIKRGDGKILNVASTAAFQPGPMMAGYYASKSFVLSYSQAINFELKKRGVQVSTLCPGPTITEFQTRAGMGNINLFK-KSLTMTAEQVAKIGYKGLMKGKPVIIAGITNKIGAMSSKWSPAKI 248
BLAST of NO02G01560 vs. NCBI_GenBank
Match: WP_105482872.1 (SDR family NAD(P)-dependent oxidoreductase [Abditibacterium utsteinense] >PQV64803.1 hypothetical protein B1R32_10370 [Abditibacterium utsteinense]) HSP 1 Score: 177.9 bits (450), Expect = 5.600e-41 Identity = 112/264 (42.42%), Postives = 154/264 (58.33%), Query Frame = 0 Query: 91 ALVTGASSGIGREISLELAKKGFGLVLVARRADKLNELAADIQMTSEPTLQNKIPVHIVSADLTKPDAAQHLFNTVVLEKGLRVTALINNAGLGHTESFINMSISKIEEIIHLNTLALTTLTRLFGSEMAKRGRGRIMSVSSIAGAAPGPLVAVYSATKAFVTSFTLAIQHELEPLGVSITNLVPGATFTEFQGRAEAHAAMAFSMPGLAMSADRVARAGVKGMLRGDSIVIPGVVNQGFVLATAIFPAKLMRMVTQMAWSEMP 355 AL+TGASSGIG E++ ELA++ + L+LVARR DKL EL E L+ + V ++ DL K AAQ LF+ + +G + LINNAG F +KI ++ +N +ALT +T LF M RGRG+I+ V+SIAG PGPL++VY A+KA+V SF+ A+ +E+E GVS+T L PGAT +EFQ RA + M MSA VAR G+ RG+ I IPG+ N+ V + P M + +P Sbjct: 4 ALITGASSGIGYEMAKELARQSYDLILVARREDKLREL--------EKLLEKHVGVTVIVLDLAKEGAAQTLFDAL---RGRPIDLLINNAGFADYALFAESGFAKISAMMQVNMIALTQITHLFLPPMIARGRGQILQVASIAGFFPGPLMSVYYASKAYVLSFSEALANEVEGSGVSVTCLCPGATISEFQERARMKESKL--MDAAYMSAKTVARRGIAAAQRGNGICIPGLFNRFLVQVPRLVPRGAMTRFMRRIQDRIP 254
BLAST of NO02G01560 vs. NCBI_GenBank
Match: WP_051686360.1 (SDR family oxidoreductase [Chryseobacterium hispalense]) HSP 1 Score: 176.8 bits (447), Expect = 1.200e-40 Identity = 113/259 (43.63%), Postives = 156/259 (60.23%), Query Frame = 0 Query: 88 KELALVTGASSGIGREISLELAKKGFGLVLVARRADKLNELAADIQMTSEPTLQNKIPVHIVSADLTKPDAAQHLFNTVVLEKGLRVTALINNAGLGHTESFINMSISKIEEIIHLNTLALTTLTRLFGSEMAKRGRGRIMSVSSIAGAAPGPLVAVYSATKAFVTSFTLAIQHELEPLGVSITNLVPGATFTEFQGRAEAHA-AMAFSMPGLAMSADRVARAGVKGMLRGDSIVIPGVVNQGFVLATAIFPAKLMRMV 346 KE L+TGASSGIG+E+S +LA KG L+LVAR DKL L +Q Q K + + DL++P+AAQ ++N V G ++T LINNAG G +F++MS+ K EE+I +N AL LT+LFG++M K G+G+IM+++S+ P P +VYSATK+FV +FT + EL+ GV+IT L PG T F A AM+ + P M AD VA+AGVK L+G+ G +N I P KLM + Sbjct: 2 KEYTLITGASSGIGKEMSRQLAAKGINLILVARSEDKLQNLQQKLQE------QYKTDIKYLLYDLSEPNAAQDIYNH-VKNVGYKITGLINNAGFGDYGNFVDMSLKKDEEMIAVNITALVGLTKLFGADMVKTGKGKIMNIASLLSFLPFPYYSVYSATKSFVLAFTETVAAELQGTGVNITALCPGTVETPFHTDAMRKTNAMSANKP---MPADVVAKAGVKLFLKGNGKKTVGAMNWFLSNIPRITPDKLMMKI 250
BLAST of NO02G01560 vs. NCBI_GenBank
Match: WP_075342438.1 (SDR family NAD(P)-dependent oxidoreductase [Tenacibaculum agarivorans]) HSP 1 Score: 175.6 bits (444), Expect = 2.800e-40 Identity = 113/254 (44.49%), Postives = 154/254 (60.63%), Query Frame = 0 Query: 90 LALVTGASSGIGREISLELAKKGFGLVLVARRADKLNELAADIQMTSEPTLQNKIPVHIVSADLTKPDAAQHLFNTVVLEKGLRVTALINNAGLGHTESFINMSISKIEEIIHLNTLALTTLTRLFGSEMAKRGRGRIMSVSSIAGAAPGPLVAVYSATKAFVTSFTLAIQHELEPLGVSITNLVPGATFTEFQGRAEAHAAMAFSMPGLAMSADRVARAGVKGMLRGDSIVIPGVV-NQGFVLATAIFPAKLM 343 +AL+TGASSG+G+E +L A++ +++VARR +KL EL ++I+ T V I+ DLTKP+AAQ +++ V E + V LINNAG G F ++++ +I+LN +ALTTLTRLF + R +G+I++VSS A PGPL AVY ATKA+VTSF+ AI EL V++TNL+PGAT TEF + F P SA VA AG KGML G VI G+ +Q +L F K M Sbjct: 4 VALITGASSGLGKEFALLHAERNGDVIIVARRENKLQELKSEIESTYH------TQVKIIVKDLTKPNAAQEIYDEVSKE-NITVNFLINNAGFGGVGKFHERALAQDITMINLNVIALTTLTRLFSPDFVNRNQGKILNVSSTASLLPGPLQAVYYATKAYVTSFSNAIAQELSDTNVTVTNLMPGATATEFGSTSGMDKTNLFDKPA---SARSVAEAGYKGMLSGKLDVISGLTFSQSLLLKMLPFTPKKM 247
BLAST of NO02G01560 vs. NCBI_GenBank
Match: WP_002612515.1 (SDR family NAD(P)-dependent oxidoreductase [Stigmatella aurantiaca] >EAU67950.1 short-chain dehydrogenase [Stigmatella aurantiaca DW4/3-1] >ADO75788.1 Short-chain dehydrogenase [Stigmatella aurantiaca DW4/3-1]) HSP 1 Score: 174.9 bits (442), Expect = 4.700e-40 Identity = 101/258 (39.15%), Postives = 153/258 (59.30%), Query Frame = 0 Query: 88 KELALVTGASSGIGREISLELAKKGFGLVLVARRADKLNELAADIQMTSEPTLQNKIPVHIVSADLTKPDAAQHLFNTVVLEKGLRVTALINNAGLGHTESFINMSISKIEEIIHLNTLALTTLTRLFGSEMAKRGRGRIMSVSSIAGAAPGPLVAVYSATKAFVTSFTLAIQHELEPLGVSITNLVPGATFTEFQGRAEAHAAMAFSMPGLAMSADRVARAGVKGMLRGDSIVIPGVVNQGFVLATAIFPAKLMRMV 346 +++ALVTGAS+G+G + + A+ G L+LVAR +L LAA ++ + I H+++ADL++P+A + LF V +GL V L+NNAG G F+ + + E++ +N +L LT LF M +RG GRI++++S AG PGP +A Y ATKAFV SF+ A+ HEL+ GV++T PGAT TEF RA+ + F PG+A + D VA G M++G + I G++N + P L+R + Sbjct: 3 RKVALVTGASAGLGEQFAQRFAQDGHDLILVARTTSRLETLAARLEQA------HGIKAHVLTADLSRPEAPERLFED-VRARGLTVEYLVNNAGFGSAGPFLEQPLEREAEMVEVNCTSLLKLTHLFARTMRERGSGRILNIASTAGFQPGPYMATYYATKAFVLSFSEALAHELKGTGVTVTCYCPGATHTEFAARAQVEKSRLFQRPGVATAPD-VAADGYAAMMKGRVLSIHGLLNWIGTMGVRFGPRALVRSI 252
BLAST of NO02G01560 vs. NCBI_GenBank
Match: WP_103312574.1 (SDR family NAD(P)-dependent oxidoreductase [Deinococcus sp. SJW1-2] >PNY82140.1 short-chain dehydrogenase [Deinococcus sp. SJW1-2]) HSP 1 Score: 174.5 bits (441), Expect = 6.200e-40 Identity = 106/254 (41.73%), Postives = 150/254 (59.06%), Query Frame = 0 Query: 91 ALVTGASSGIGREISLELAKKGFGLVLVARRADKLNELAADIQMTSEPTLQNKIPVHIVSADLTKPDAAQHLFNTVVLEKGLRVTALINNAGLGHTESFINMSISKIEEIIHLNTLALTTLTRLFGSEMAKRGRGRIMSVSSIAGAAPGPLVAVYSATKAFVTSFTLAIQHELEPLGVSITNLVPGATFTEFQGRAEAHAAMAFSMPG--LAMSADRVARAGVKGMLRGDSIVIPGVVNQGFVLATAIFPAKLM 343 AL+TGAS GIG EI+ +LA +G L+LVAR DKL LA ++ + Q+ + H+++ DLT+P+A L + +GL+V L+NNAG G F +I +I +N ALT LTR F M +RGRGR+++V+S A PGP++AVY ATKA+V SF+ A+ EL GV ++ L PG T FQ A+ + + S P +SA +VA+ GV MLRG ++ + G +NQ VLA P M Sbjct: 10 ALITGASGGIGEEIARQLAARGAHLILVARSEDKLQALAQEL------SAQHGVQSHVIALDLTRPEAGAEL-EREIAARGLQVDILVNNAGFGGFSEFWEQDAGEIGRMIAVNIAALTDLTRRFLPGMVQRGRGRVLNVASTAAFMPGPMMAVYYATKAYVLSFSEAVNEELRGRGVGVSALCPGPVETGFQAAADLNQSKLLSGPNRVAMLSAAQVAQIGVDAMLRGQAVAVAGRINQLQVLAPRFLPRAAM 256
BLAST of NO02G01560 vs. NCBI_GenBank
Match: WP_063557159.1 (SDR family NAD(P)-dependent oxidoreductase [Clostridium ljungdahlii] >OAA82863.1 putative oxidoreductase [Clostridium ljungdahlii]) HSP 1 Score: 172.9 bits (437), Expect = 1.800e-39 Identity = 105/260 (40.38%), Postives = 156/260 (60.00%), Query Frame = 0 Query: 88 KELALVTGASSGIGREISLELAKKGFGLVLVARRADKLNELAADIQMTSEPTLQNKIPVHIVSADLTKPDAAQHLFNTVVLEKGLRVTALINNAGLGHTESFINMSISKIEEIIHLNTLALTTLTRLFGSEMAKRGRGRIMSVSSIAGAAPGPLVAVYSATKAFVTSFTLAIQHELEPLGVSITNLVPGATFTEFQGRAEAHAAMAFSMPGLAMSADRVARAGVKGMLRGDSIVIPGVVNQGFVLATAIFPAKLMRMVTQ 348 ++ AL+TGASSGIG E++ +K G+ LVLVAR KL E+A ++ + I VHI+ DL+K ++ + LF V + G+RVT L+NNAG G+ F + I K E+II LN A+T LT+LF EM K +G I++V+S PGP +AVY A+KA+V SF+ A+++EL+P G+ + L PGAT T F A AMSA++ A +G ++ S++IPG N+ VL + + P K+ +V + Sbjct: 6 EKTALITGASSGIGLELAKLFSKDGYNLVLVARSESKLAEIAENL------IKKYNINVHIIKEDLSKRESVKDLF-LKVQQLGIRVTTLVNNAGAGYCGLFHEIDIDKDEKIIGLNIEAITYLTKLFSKEMIKLKKGSILNVASTGSYEPGPYIAVYYASKAYVLSFSQALENELKPYGIKVCTLCPGATKTGFSKNAGKKDIKT------AMSAEKTAEIAYRGFMKNKSVIIPGSFNKIAVLFSKLLPGKISAVVVR 252
BLAST of NO02G01560 vs. NCBI_GenBank
Match: WP_015346555.1 (SDR family NAD(P)-dependent oxidoreductase [Myxococcus stipitatus] >AGC42292.1 short chain dehydrogenase [Myxococcus stipitatus DSM 14675]) HSP 1 Score: 172.6 bits (436), Expect = 2.400e-39 Identity = 101/242 (41.74%), Postives = 150/242 (61.98%), Query Frame = 0 Query: 88 KELALVTGASSGIGREISLELAKKGFGLVLVARRADKLNELAADIQMTSEPTLQNKIPVHIVSADLTKPDAAQHLFNTVVLEKGLRVTALINNAGLGHTESFINMSISKIEEIIHLNTLALTTLTRLFGSEMAKRGRGRIMSVSSIAGAAPGPLVAVYSATKAFVTSFTLAIQHELEPLGVSITNLVPGATFTEFQGRAEAHAAMAFSMPGLAMSADRVARA-GVKGMLRGDSIVIPGVVNQ 329 +++AL+TGAS+G+G + + A+ G ++LVAR A +L LA+ ++ ++ + H++ DL +P+AA+ LF V E+GL V L+NNAG G + F++ + + E++ LN AL LT LF M +RG GR+++V+S AG PGP +A Y ATKAFV S + A+ HEL+ GV++T PGAT TEF RA + F PG+A +AD V A GV M+RG + I G +NQ Sbjct: 3 RKVALITGASAGLGEQFARRFARDGHDVILVARSAPRLEALASALEK------EHGVKAHVIPLDLGQPEAAEQLF-ARVSERGLEVEFLVNNAGFGSSGPFLDQDVKREAEMVALNCTALLKLTHLFARPMRERGHGRVLNVASTAGFQPGPYMATYYATKAFVVSLSEALAHELKGSGVTVTCHCPGATHTEFAQRAGTSKSRLFQRPGVASAADVVEHAYGV--MMRGRVLAIHGFLNQ 235 The following BLAST results are available for this feature:
BLAST of NO02G01560 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO02G01560 ID=NO02G01560|Name=NO02G01560|organism=Nannochloropsis oceanica|type=gene|length=2062bpback to top protein sequence of NO02G01560.1 >NO02G01560.1-protein ID=NO02G01560.1-protein|Name=NO02G01560.1|organism=Nannochloropsis oceanica|type=polypeptide|length=370bpback to top Synonyms
Publications
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