NO02G01470, NO02G01470 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO02G01470 vs. NCBI_GenBank
Match: EWM30536.1 (serine arginine-rich splicing factor 4 [Nannochloropsis gaditana]) HSP 1 Score: 279.6 bits (714), Expect = 1.400e-71 Identity = 148/228 (64.91%), Postives = 175/228 (76.75%), Query Frame = 0 Query: 1 MPGTRLFVGNLTSAATAEDLRDLFKEFGPIDRIDMKKEGGFGFVEFIRGRDGEEALVKAAQSVNGKELHGVTLTVEEAKGPKREGPRPQMQRSEHRVRVEGMPRGSTWQDLKDFARGSTGLAPLYTEVVRGNPSVGIIEYHRREDMIEALRQINNTELRGVMVQVYEDAPSGRGRGDERRRSYSPPRREPSRGGDIRGGYYDEFRPP---LRGPGLEKGTPRITYLPP 226 MPGTRL+VGNLT + T ++LR++F +GPIDR+DMKK+ G+ FVEF+RGR+GE+A+V AAQ +N KELHG+ LTVEEAKGPKREGPRP+MQRS+ R+RVEGMPR +TWQDLKDFARG GLAPLYTEV+RG P VGIIEYHRREDMIEAL I+NTELRGV+VQVYED P R RG ERR +S R P GD R G D PP E+ P +Y+PP Sbjct: 1 MPGTRLYVGNLTPSVTGDELREIFSGYGPIDRVDMKKD-GYAFVEFVRGREGEDAVVAAAQGMNKKELHGLILTVEEAKGPKREGPRPEMQRSDFRIRVEGMPREATWQDLKDFARGKKGLAPLYTEVLRGTPGVGIIEYHRREDMIEALSLIHNTELRGVVVQVYEDTPMSRDRGPERRPGFS---RSPP--GDYRRG--DNRFPPRXXXXXXXXERYPP--SYMPP 218
BLAST of NO02G01470 vs. NCBI_GenBank
Match: ORY94919.1 (hypothetical protein BCR43DRAFT_476840 [Syncephalastrum racemosum]) HSP 1 Score: 118.6 bits (296), Expect = 4.200e-23 Identity = 63/170 (37.06%), Postives = 103/170 (60.59%), Query Frame = 0 Query: 4 TRLFVGNLTSAATAEDLRDLFKEFGPIDRIDMKKEGGFGFVEFIRGRDGEEALVKAAQSVNGKELHGVTLTVEEAKGPKREGPRPQMQRSEHRVRVEGMPRGSTWQDLKDFARGSTGLAPLYTEVVRGNPSVGIIEYHRREDMIEALRQINNTELRGVMVQVYEDAPSGR 174 TR+++G L DL LF+++GPI I++K G+GFVEF RD ++ + +GKE G L VE A+G + R + + S +R+ VEG+P G++WQDLKD R + + + +++R P G++E+ R+DM ALR++ +++L G VQ++ED+ S R Sbjct: 3 TRVYIGRLARDCRERDLEKLFRKYGPIREINIK--SGYGFVEFKDPRDADDVV----YDFHGKEFLGERLIVELARGKRHGERRRETRHSHYRLIVEGIPSGTSWQDLKDLMRKAGEVT--FADIIRSRPGEGVVEFAYRDDMEYALRKMQDSDLNGSRVQLFEDSSSHR 164
BLAST of NO02G01470 vs. NCBI_GenBank
Match: KZT53734.1 (hypothetical protein CALCODRAFT_474354 [Calocera cornea HHB12733]) HSP 1 Score: 116.3 bits (290), Expect = 2.100e-22 Identity = 76/204 (37.25%), Postives = 107/204 (52.45%), Query Frame = 0 Query: 1 MPGTRLFVGNLTSAATAEDLRDLFKEFGPIDRIDMKKEGGFGFVEFIRGRDGEEALVKAAQSVNGKELHGVTLTVEEAK------GPKREGPRPQMQRSEHRVRVEGMPRGSTWQDLKDFARGSTGLAPLYTEVVRGNPSVGIIEYHRREDMIEALRQINNTELRGVMVQVYEDAPSGRGRGD---------ERRRSYSPPRRE 190 M G R+++G + A +D+ F +G I +D + GFGFVEF +D E+ + S GK+L G + +E AK GP GPRP +R +R+ V G+ R ++WQDLKDF R + A ++++ R NP GI+EY ED ALR +N+ +LRG V+V G G E RRS SP RRE Sbjct: 1 MSGKRVYIGKMPRDAMKQDVEQFFDGYGRI--LDCRIMNGFGFVEFDSPKDAEDVVA----SFQGKKLLGEPVIIELAKESRRERGPDERGPRPFTRRPGYRILVHGISRDTSWQDLKDFGREAG--AVTFSDIDRDNPGEGILEYLTPEDQENALRVLNDRDLRGTTVRVTRGEVGSGGLGGNGADYARDREFRRSRSPSRRE 196
BLAST of NO02G01470 vs. NCBI_GenBank
Match: CDS04861.1 (hypothetical protein LRAMOSA07391 [Lichtheimia ramosa]) HSP 1 Score: 115.5 bits (288), Expect = 3.600e-22 Identity = 65/167 (38.92%), Postives = 101/167 (60.48%), Query Frame = 0 Query: 4 TRLFVGNLTSAATAEDLRDLFKEFGPIDRIDMKKEGGFGFVEFIRGRDGEEALVKAAQSVNGKELHGVTLTVEEAKGPK--REGPRPQMQRSEHRVRVEGMPRGSTWQDLKDFARGSTGLAPLYTEVVRGNPSVGIIEYHRREDMIEALRQINNTELRGVMVQVYED 169 TR+++G L A DL LFK +G I I++K G+GFVEF RD E+ + +GKE G + VE A+G + RE R +RS++R+ VE +P G++WQDLKD R + + + +V+R P G++E+ R DM AL+++N++EL G V+++ED Sbjct: 3 TRVYIGRLARDARDRDLERLFKNYGEIREINIK--SGYGFVEFKDPRDAEDVV----YDFHGKEFLGERIIVEMARGARRGREDRRRVDRRSDYRLTVENIPSGTSWQDLKDLMRKAGEVT--FADVIRSRPGEGVVEFAHRSDMEYALKKLNDSELNGQRVRLFED 161
BLAST of NO02G01470 vs. NCBI_GenBank
Match: EJT99207.1 (hypothetical protein DACRYDRAFT_23817 [Dacryopinax primogenitus]) HSP 1 Score: 115.2 bits (287), Expect = 4.700e-22 Identity = 79/217 (36.41%), Postives = 116/217 (53.46%), Query Frame = 0 Query: 1 MPGTRLFVGNLTSAATAEDLRDLFKEFGPIDRIDMKKEGGFGFVEFIRGRDGEEALVKAAQSVNGKELHGVTLTVEEAKGPKRE--------GPRPQMQRSEHRVRVEGMPRGSTWQDLKDFARGSTGLAPLYTEVVRGNPSVGIIEYHRREDMIEALRQINNTELRGVMVQVY--EDAPSGRGRGDERRRSYSPPRREPSRGGDIRGGYYDEFRPP 208 M R+++G + A +D+ F+ +G I D++ GFGFVEF +D E+ + + GK L G + +E AK +RE GPRP +R +RV + G+ R ++WQDLKDF R + A ++++ R NP GI+EY +D+ ALR +NN ELRGV V+V E G G R + + RR+ SR RGG + RPP Sbjct: 1 MSSKRIYIGKMPRDAMKQDIEKFFEGYGRIQ--DIRIMNGFGFVEFENPKDAEDVVA----NFQGKNLLGEPIIIELAKESRRERGGGFEERGPRPFTRRPGYRVLIHGVSRDTSWQDLKDFGREAG--AVTFSDLDRENPGEGILEYLTPDDLENALRLLNNRELRGVTVRVSRGEGGLGGSGVDYSRDKEF---RRDRSRSPGRRGGDSFDRRPP 206
BLAST of NO02G01470 vs. NCBI_GenBank
Match: CDH49946.1 (alternative splicing factor asf [Lichtheimia corymbifera JMRC:FSU:9682]) HSP 1 Score: 114.0 bits (284), Expect = 1.000e-21 Identity = 65/172 (37.79%), Postives = 102/172 (59.30%), Query Frame = 0 Query: 4 TRLFVGNLTSAATAEDLRDLFKEFGPIDRIDMKKEGGFGFVEFIRGRDGEEALVKAAQSVNGKELHGVTLTVEEAKGPK--REGPRPQMQRSEHRVRVEGMPRGSTWQDLKDFARGSTGLAPLYTEVVRGNPSVGIIEYHRREDMIEALRQINNTELRGVMVQVYEDAPSGR 174 TR+++G L A DL LFK +G I I++K G+GFVEF RD E+ + +GKE G + VE A+G + RE R +RS++R+ VE +P G++WQDLKD R + + + +V+R P G++E+ R DM AL++++++EL G V+++ED R Sbjct: 3 TRVYIGRLARDARDRDLERLFKSYGEIREINIK--SGYGFVEFKDPRDAEDVV----YDFHGKEFLGERIIVEMARGARRGREDRRRVDRRSDYRLTVENIPSGTSWQDLKDLMRKAGEVT--FADVIRSRPGEGVVEFAHRSDMEYALKKLDDSELNGQRVRLFEDTSRRR 166
BLAST of NO02G01470 vs. NCBI_GenBank
Match: NP_594570.1 (mRNA export factor Srp2 [Schizosaccharomyces pombe] >P78814.2 RecName: Full=Pre-mRNA-splicing factor srp2 >AAC39357.1 putative pre-mRNA splicing factor [Schizosaccharomyces pombe] >CAB57400.1 mRNA export factor Srp2 [Schizosaccharomyces pombe]) HSP 1 Score: 112.5 bits (280), Expect = 3.000e-21 Identity = 80/220 (36.36%), Postives = 107/220 (48.64%), Query Frame = 0 Query: 1 MPGTRLFVGNLTSAATAEDLRDLFKEFGPIDRIDMKKEGGFGFVEFIRGRDGEEALVKAAQSVNGKELHGVTLTVEEAKGPKRE---------GPRPQMQRSEHRVRVEGMPRGSTWQDLKDFARGSTGLAPLYTEVVRGNPSVGIIEYHRREDMIEALRQINNTELRGVMVQVYEDAPSGRGRGDE---RRRSYSPPRREPSRGGDIRGGYY--DEFRP 207 M TRLFVG + AT ED+ D FK +G I +D K GFGFVE RD + + GKE G + VE A+G +R P+ +R+ R+ VE + +WQDLKD R + P +T+ R NP G++E+ EDM AL +N ++G V + ED + E R RS SPP R R RGG Y D +RP Sbjct: 1 MSETRLFVGRIPPQATREDMMDFFKGYGQI--LDCKLMNGFGFVEVEDARDARDIV----NDFQGKEFMGSRIVVEPARGERRRRENFRESAASKYPRPRRTGFRLIVENLSEDVSWQDLKDVMRKAG--EPTFTDAHRENPGAGVVEFSTEEDMRNALTSLNGEVIKGQAVTLREDPDAANEPLPEVPSRFRSRSPPARRRYRDDYRRGGDYRRDAYRP 212
BLAST of NO02G01470 vs. NCBI_GenBank
Match: XP_007814433.1 (pre-mRNA splicing factor [Metarhizium acridum CQMa 102] >EFY85887.1 pre-mRNA splicing factor [Metarhizium acridum CQMa 102]) HSP 1 Score: 112.1 bits (279), Expect = 4.000e-21 Identity = 74/221 (33.48%), Postives = 109/221 (49.32%), Query Frame = 0 Query: 4 TRLFVGNLTSAATAEDLRDLFKEFGPIDRIDMKKEGGFGFVEFIRGRDGEEALVKAAQSVNGKELHGVTLTVEEAKGPKR--------EGPRPQMQRSEHRVRVEGMPRGSTWQDLKDFARGSTGLAPLYTEVVRGNPSVGIIEYHRREDMIEALRQINNTELRGVMVQVYEDAPSGRGRGDERRRSYSPPRREPSRGGDIRGGYYDEFRPPLRGPGLEKG 217 TRL++GNL AT D+ F G D ++K GFGF+E+ D + + +G + G LTV+ A+GP++ E P+ +R+ HR+++ G+P ++WQDLKDFAR GL +Y+E R + G +EY D+ A+ +++ E +G VQ D D R RS SP R P R YD PP RG + G Sbjct: 8 TRLYLGNLPRNATKADIEAHFATHGTGDITEVKLMNGFGFIEYKDPMDARDVV------PDGSDFMGERLTVQFARGPRQRESGFSGHERAPPRPRRTPHRMQITGLPNETSWQDLKDFAR-QPGLDVVYSETGRDSNGRGFVEYETAADLRTAVDKLDGREFKGNRVQCIADTQPDMPPRDGRGRSRSPGGRRPYNNMPTRFDEYDRRGPPPRGYNRDPG 221
BLAST of NO02G01470 vs. NCBI_GenBank
Match: KID93081.1 (pre-mRNA splicing factor [Metarhizium guizhouense ARSEF 977]) HSP 1 Score: 112.1 bits (279), Expect = 4.000e-21 Identity = 74/221 (33.48%), Postives = 110/221 (49.77%), Query Frame = 0 Query: 4 TRLFVGNLTSAATAEDLRDLFKEFGPIDRIDMKKEGGFGFVEFIRGRDGEEALVKAAQSVNGKELHGVTLTVEEAKGPKR--------EGPRPQMQRSEHRVRVEGMPRGSTWQDLKDFARGSTGLAPLYTEVVRGNPSVGIIEYHRREDMIEALRQINNTELRGVMVQVYEDAPSGRGRGDERRRSYSPPRREPSRGGDIRGGYYDEFRPPLRGPGLEKG 217 TRL++GNL AT D+ F G D ++K GFGF+E+ D + + +G + G LTV+ A+GP++ E P+ +R+ HR+++ G+P ++WQDLKDFAR GL +Y+E R + G +EY D+ A+ +++ E +G VQ D D R RS SP R P R G +D PP RG + G Sbjct: 8 TRLYLGNLPRNATKADIEAHFATHGTGDITEVKLMNGFGFIEYKDPMDARDVV------PDGSDFMGERLTVQFARGPRQRESGFSGHERAPPRPRRTPHRMQITGLPNETSWQDLKDFAR-QPGLDVVYSETGRDSNGRGFVEYETAADLRTAVDKLDGREFKGNRVQCIADTQPDMPPRDGRGRSRSPGGRRPYNNVPPRFGEHDRRGPPPRGYNRDPG 221
BLAST of NO02G01470 vs. NCBI_GenBank
Match: EXV05659.1 (RNA recognition motif (RRM) superfamily protein [Metarhizium robertsii]) HSP 1 Score: 111.3 bits (277), Expect = 6.800e-21 Identity = 74/221 (33.48%), Postives = 109/221 (49.32%), Query Frame = 0 Query: 4 TRLFVGNLTSAATAEDLRDLFKEFGPIDRIDMKKEGGFGFVEFIRGRDGEEALVKAAQSVNGKELHGVTLTVEEAKGPKR--------EGPRPQMQRSEHRVRVEGMPRGSTWQDLKDFARGSTGLAPLYTEVVRGNPSVGIIEYHRREDMIEALRQINNTELRGVMVQVYEDAPSGRGRGDERRRSYSPPRREPSRGGDIRGGYYDEFRPPLRGPGLEKG 217 TRL++GNL AT D+ F G D ++K GFGF+E+ D + + +G + G LTV+ A+GP++ E P+ +R+ HR+++ G+P ++WQDLKDFAR GL +Y+E R + G +EY D+ A+ +++ E +G VQ D D R RS SP R P R YD PP RG + G Sbjct: 8 TRLYLGNLPRNATKADIEAHFATHGTGDITEVKLMNGFGFIEYKDPMDARDVV------PDGSDFMGERLTVQFARGPRQRESGFSGHERAPPRPRRTPHRMQITGLPNETSWQDLKDFAR-QPGLDVVYSETGRDSNGRGFVEYETAADLRTAVDKLDGREFKGNRVQCIADTQPDMPPRDGRGRSRSPGGRRPYNNVPPRFDEYDRRGPPPRGYNRDPG 221 The following BLAST results are available for this feature:
BLAST of NO02G01470 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO02G01470 ID=NO02G01470|Name=NO02G01470|organism=Nannochloropsis oceanica|type=gene|length=1362bpback to top protein sequence of NO02G01470.1 >NO02G01470.1-protein ID=NO02G01470.1-protein|Name=NO02G01470.1|organism=Nannochloropsis oceanica|type=polypeptide|length=389bpback to top Synonyms
Publications
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