NO02G01280, NO02G01280 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO02G01280 vs. NCBI_GenBank
Match: EWM30540.1 (t-snare family protein [Nannochloropsis gaditana]) HSP 1 Score: 468.8 bits (1205), Expect = 1.400e-128 Identity = 251/323 (77.71%), Postives = 269/323 (83.28%), Query Frame = 0 Query: 1 MNDRLTELRAKGGGGTGSMPSDSVGIDMTNLHG---GPAAAAATGAAGSTQPQFMNEFFTDVEATKEDINAIKEAIRRMNTIHQEAFLATTGPKEAKLSHELNAVIQXXXXXXXXXXXXXXXXXXXTTKLRQDTRCNPSQLRIRDNLTNTLTRKFVDVMKDYQNAQTKYKAFIKNKVQRQVQIVKPDASPEEIEAVFKSGGGADEVITQAILKGANESIRSVYQNVADKYQDVLTLEASIAELHQMFLDFALLVEQQGELLDQIEYQVKGAANYVEDGTLQVQGAIESAKKARKYQCCMLVCVXXXXXXXXXXLFVFRKQVGV 321 MNDRL ELRAKGGG PSDSVGIDMT L G G AA + ++QPQ+MN+FFTDVEATKEDINAIKEAIRRM+ IHQEAFLATTGP+EAKLS ELNAVIQ TTKLRQD+RC PSQLRIRDNLTNTLTRKFVDVMKDYQNAQTKYKAFIK+KVQRQVQIVKPDAS EEIEAVFKSGGG D+VITQAILKGANESIR+VYQNVADKYQDVLTLEASIAELHQMFLDFALLVEQQGE+LDQIEYQVKGAANYVE+GTLQVQGAI +AKKARKYQCCMLVC+ LFVF+KQ+G+ Sbjct: 13 MNDRLAELRAKGGG----TPSDSVGIDMTRLQGRGDGAGAAPSAAVTNASQPQYMNDFFTDVEATKEDINAIKEAIRRMSGIHQEAFLATTGPREAKLSQELNAVIQETNPKAARAKKMLSKMKDETTKLRQDSRCTPSQLRIRDNLTNTLTRKFVDVMKDYQNAQTKYKAFIKDKVQRQVQIVKPDASTEEIEAVFKSGGGGDQVITQAILKGANESIRNVYQNVADKYQDVLTLEASIAELHQMFLDFALLVEQQGEMLDQIEYQVKGAANYVEEGTLQVQGAIANAKKARKYQCCMLVCIMVLVGILVLVLFVFKKQIGL 331
BLAST of NO02G01280 vs. NCBI_GenBank
Match: EJK67895.1 (hypothetical protein THAOC_11001 [Thalassiosira oceanica]) HSP 1 Score: 239.2 bits (609), Expect = 1.800e-59 Identity = 123/249 (49.40%), Postives = 171/249 (68.67%), Query Frame = 0 Query: 46 STQPQFMNEFFTDVEATKEDINAIKEAIRRMNTIHQEAFLATTGPKEAKLSHELNAVIQXXXXXXXXXXXXXXXXXXXTTKLRQDTRCNPSQLRIRDNLTNTLTRKFVDVMKDYQNAQTKYKAFIKNKVQRQVQIVKPDASPEEIEAVFKSGGGADEVITQAILK-GANESIRSVYQNVADKYQDVLTLEASIAELHQMFLDFALLVEQQGELLDQIEYQVKGAANYVEDGTLQVQGAIESAKKARKYQ 294 S QP+ M +FF DVEA K DI+A+ +A ++N + +A LAT+ +EA++S + +++ + L+++ + P+ LR+R+NL NTL RKF+D MK YQNAQ +YK +K KV RQVQI+KPDA+ +E++ + +S GG + + Q IL G N+ I++ Y+ VA KYQD+LTLEAS+AELHQMFLDFALL +QQGELLDQIEYQV+ AA+YVED + V GAIE +KK RK Q Sbjct: 70 SQQPEHMKQFFNDVEAIKSDISAVGDATEQINALKDKAVLATSETEEAQISEMIRTLVEGTNGRAKTCKNLLGLLKEENSNLKKEEKAKPTDLRVRENLVNTLLRKFIDEMKRYQNAQQQYKTDVKKKVTRQVQIIKPDATDQEVDDIMRSEGGREALYQQQILSGGVNDQIKTQYRAVAGKYQDILTLEASVAELHQMFLDFALLTDQQGELLDQIEYQVREAADYVEDANVDVDGAIEYSKKIRKKQ 318
BLAST of NO02G01280 vs. NCBI_GenBank
Match: XP_008614152.1 (hypothetical protein SDRG_09963 [Saprolegnia diclina VS20] >EQC32211.1 hypothetical protein SDRG_09963 [Saprolegnia diclina VS20]) HSP 1 Score: 239.2 bits (609), Expect = 1.800e-59 Identity = 140/298 (46.98%), Postives = 184/298 (61.74%), Query Frame = 0 Query: 1 MNDRLTELRAKGGGGTGSMPSDSVGIDMTNLHGGPAAAAATGAAGSTQPQFMNEFFTDVEATKEDINAIKEAIRRMNTIHQEAFLATTGPKEAKLSHELNAVIQXXXXXXXXXXXXXXXXXXXTTKLRQDTRCNPSQLRIRDNLTNTLTRKFVDVMKDYQNAQTKYKAFIKNKVQRQVQIVKPDASPEEIEAVFKSGGGADEVITQAILKGANESIRSVYQNVADKYQDVLTLEASIAELHQMFLDFALLVEQQGELLDQIEYQVKGAANYVEDGTLQVQGAIESAKKARKYQCCMLV 299 MNDRL EL K S V ID++ A+ T+P+FM +FF DVE + D++ I A R+ ++ +A LAT +E +S EL VI + + ++D S++RIRDN++ TLTRKF+D MK+YQ AQ K+KA +KNKV+RQVQIVKPDAS +EI+ V +S + AIL+G+ ESI+ VY N DKYQDVL LE S+AELHQMFLD ALLVEQQGE+LDQIE+QVK A+NY+E G +V AI++ K RK QCC+LV Sbjct: 1 MNDRLAELTGK---------SSDVTIDVSE---------ASSTTEITRPKFMEKFFVDVEDMQADLSKIGLATDRIGELNHQALLATAAGEEQTISQELCLVIDNSNKIAAHAKGMLELIKKESVEKKKDKTVAASEIRIRDNMSTTLTRKFMDTMKEYQKAQQKFKADMKNKVKRQVQIVKPDASEQEIDMVMRS-ADPGAIYRSAILQGSAESIKEVYMNCHDKYQDVLKLEQSVAELHQMFLDLALLVEQQGEMLDQIEFQVKAASNYIEAGNKEVSKAIQTQKSMRKKQCCLLV 279
BLAST of NO02G01280 vs. NCBI_GenBank
Match: XP_012200874.1 (hypothetical protein SPRG_06672 [Saprolegnia parasitica CBS 223.65] >KDO28434.1 hypothetical protein SPRG_06672 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 238.0 bits (606), Expect = 4.000e-59 Identity = 139/298 (46.64%), Postives = 184/298 (61.74%), Query Frame = 0 Query: 1 MNDRLTELRAKGGGGTGSMPSDSVGIDMTNLHGGPAAAAATGAAGSTQPQFMNEFFTDVEATKEDINAIKEAIRRMNTIHQEAFLATTGPKEAKLSHELNAVIQXXXXXXXXXXXXXXXXXXXTTKLRQDTRCNPSQLRIRDNLTNTLTRKFVDVMKDYQNAQTKYKAFIKNKVQRQVQIVKPDASPEEIEAVFKSGGGADEVITQAILKGANESIRSVYQNVADKYQDVLTLEASIAELHQMFLDFALLVEQQGELLDQIEYQVKGAANYVEDGTLQVQGAIESAKKARKYQCCMLV 299 MNDRL EL K S V ID++ A+ T+P+FM +FF DVE + D++ I A R+ ++ +A LAT +E +S EL VI + + ++D S++RIRDN++ TLTRKF+D MK+YQ AQ K+KA +KNKV+RQVQIVKPDAS +EI+ V +S + AIL+G+ ESI+ VY N DKYQDVL LE S+AELHQMFLD ALLVEQQGE+LDQIE+QVK A+NY++ G +V AI++ K RK QCC+LV Sbjct: 1 MNDRLAELTGK---------SSDVMIDISE---------ASSTTEITRPKFMEKFFLDVEDMQADLSKIGHATDRIGELNHQALLATAAGEEQTISQELCLVIDSTNKIAAHAKGMLELIKKESAEKKKDKTVAASEIRIRDNMSTTLTRKFMDTMKEYQKAQQKFKADMKNKVKRQVQIVKPDASEQEIDMVMRS-ADPGAIYRSAILQGSAESIKEVYMNCHDKYQDVLKLEQSVAELHQMFLDLALLVEQQGEMLDQIEFQVKAASNYIDAGNKEVTKAIQTQKSMRKKQCCLLV 279
BLAST of NO02G01280 vs. NCBI_GenBank
Match: ETL95743.1 (hypothetical protein L917_06499 [Phytophthora parasitica]) HSP 1 Score: 229.9 bits (585), Expect = 1.100e-56 Identity = 136/297 (45.79%), Postives = 183/297 (61.62%), Query Frame = 0 Query: 1 MNDRLTELRAKGGGGTGSMPSDSVGIDMTNLHGGPAAAAATGAAGSTQPQFMNEFFTDVEATKEDINAIKEAIRRMNTIHQEAFLATTGPKEAKLSHELNAVIQXXXXXXXXXXXXXXXXXXXTTKLRQDTRCNPSQLRIRDNLTNTLTRKFVDVMKDYQNAQTKYKAFIKNKVQRQVQIVKPDASPEEIEAVFKSGGGADEVITQAILKGANESIRSVYQNVADKYQDVLTLEASIAELHQMFLDFALLVEQQGELLDQIEYQVKGAANYVEDGTLQVQGAIESAKKARKYQCCML 298 M DRL E++ K + PSD V ID+ +++ G +P+FM FF DVE + D+ +I A +++ ++ +A LAT+ +E +S EL VI+ + + ++D S++RIRDN+ TLT+KF+D MK+YQ AQ KYK+ +KNKV+RQVQIVKPDAS EI+AV +SG + + GA ESI V+ + DKYQDVL LE S+AELHQMFLD ALLVEQQGELLDQI+YQV+ AANYVE G +VQ AI+ K RK CC+L Sbjct: 1 MLDRLAEIKGK------APPSDQVAIDVEVRVPCCYSSSLMSRRGVVRPKFMEVFFKDVEEMQMDLASISLASQQITELNSKAILATSNTEEQAISTELGFVIETTNKLAAHAKGLLERLKKESAERKKDKNTPLSEVRIRDNMCATLTKKFMDAMKEYQKAQQKYKSDMKNKVKRQVQIVKPDASEAEIDAVMRSGDPGSIYKSAILQGGAAESITDVFLHCQDKYQDVLKLEQSVAELHQMFLDLALLVEQQGELLDQIDYQVRTAANYVEQGNKEVQKAIKHQKSYRKKMCCLL 291
BLAST of NO02G01280 vs. NCBI_GenBank
Match: ETI49272.1 (hypothetical protein F443_06819 [Phytophthora parasitica P1569] >ETM48929.1 hypothetical protein L914_06603 [Phytophthora parasitica]) HSP 1 Score: 228.8 bits (582), Expect = 2.400e-56 Identity = 136/297 (45.79%), Postives = 182/297 (61.28%), Query Frame = 0 Query: 1 MNDRLTELRAKGGGGTGSMPSDSVGIDMTNLHGGPAAAAATGAAGSTQPQFMNEFFTDVEATKEDINAIKEAIRRMNTIHQEAFLATTGPKEAKLSHELNAVIQXXXXXXXXXXXXXXXXXXXTTKLRQDTRCNPSQLRIRDNLTNTLTRKFVDVMKDYQNAQTKYKAFIKNKVQRQVQIVKPDASPEEIEAVFKSGGGADEVITQAILKGANESIRSVYQNVADKYQDVLTLEASIAELHQMFLDFALLVEQQGELLDQIEYQVKGAANYVEDGTLQVQGAIESAKKARKYQCCML 298 M DRL E++ K + PSD V ID+ +++ G +P+FM FF DVE + D+ I A +++ ++ +A LAT+ +E +S EL VI+ + + ++D S++RIRDN+ TLT+KF+D MK+YQ AQ KYK+ +KNKV+RQVQIVKPDAS EI+AV +SG + + GA ESI V+ + DKYQDVL LE S+AELHQMFLD ALLVEQQGELLDQI+YQV+ AANYVE G +VQ AI+ K RK CC+L Sbjct: 1 MLDRLAEIKGK------APPSDQVAIDVEVRVPCCYSSSLMSRRGVVRPKFMEVFFKDVEEMQMDLANISLASQQITELNSKAILATSNTEEQAISTELGFVIETTNKLAAHAKGLLERLKKESAERKKDKNTPLSEVRIRDNMCATLTKKFMDAMKEYQKAQQKYKSDMKNKVKRQVQIVKPDASEAEIDAVMRSGDPGSIYKSAILQGGAAESITDVFLHCQDKYQDVLKLEQSVAELHQMFLDLALLVEQQGELLDQIDYQVRTAANYVEQGNKEVQKAIKHQKSYRKKMCCLL 291
BLAST of NO02G01280 vs. NCBI_GenBank
Match: GAX28392.1 (syntaxin 1B/2/3 [Fistulifera solaris]) HSP 1 Score: 228.4 bits (581), Expect = 3.100e-56 Identity = 126/250 (50.40%), Postives = 164/250 (65.60%), Query Frame = 0 Query: 46 STQPQFMNEFFTDVEATKEDINAIKEAIRRMNTIHQEAFLATTGPKEAKLSHELNAVIQXXXXXXXXXXXXXXXXXXXTTKLRQDTRCNPSQLRIRDNLTNTLTRKFVDVMKDYQNAQTKYKAFIKNKVQRQVQIVKPDASPEEIEAVFKSGGGADEVITQAILK-GANESIRSVYQNVADKYQDVLTLEASIAELHQMFLDFALLVEQQGELLDQIEYQVKGAANYVEDGTLQVQGAIESAKKARKYQC 295 S Q + M+ FF +VE+ K+DI AI +A + + I+ A ATT +E +LS +L ++ T KL+++ + S LR+R+NL NTLTRKF+D MK YQ AQ KYK IK KV RQVQIVKPDA+ E+I+AV +S GG D + + IL G N+ +++ Y+ VA KYQDVL LE S+AELHQMFLDFALL EQQGELLDQIE+QVK A +YVE+ + V AIE +K RK QC Sbjct: 32 SKQAKHMDHFFREVESIKKDIEAITKATKSIGNINDRALQATTTEEENELSRKLRPLVDQTNKQAKRTKTLLGLLKEETQKLQENKQIKQSDLRVRENLCNTLTRKFIDEMKAYQAAQQKYKTDIKKKVARQVQIVKPDATDEDIDAVMRSEGGRDALYREQILAGGVNDQVKTTYEKVAGKYQDVLALEQSVAELHQMFLDFALLTEQQGELLDQIEFQVKQAGDYVEEANVDVYEAIEYQRKIRKKQC 281
BLAST of NO02G01280 vs. NCBI_GenBank
Match: XP_008892483.1 (hypothetical protein PPTG_02905 [Phytophthora parasitica INRA-310] >ETK89163.1 hypothetical protein L915_06689 [Phytophthora parasitica] >ETL42573.1 hypothetical protein L916_06628 [Phytophthora parasitica] >ETN23295.1 hypothetical protein PPTG_02905 [Phytophthora parasitica INRA-310]) HSP 1 Score: 226.9 bits (577), Expect = 9.100e-56 Identity = 136/301 (45.18%), Postives = 181/301 (60.13%), Query Frame = 0 Query: 1 MNDRLTELRAKGGGGTGSMPSDSVGID----MTNLHGGPAAAAATGAAGSTQPQFMNEFFTDVEATKEDINAIKEAIRRMNTIHQEAFLATTGPKEAKLSHELNAVIQXXXXXXXXXXXXXXXXXXXTTKLRQDTRCNPSQLRIRDNLTNTLTRKFVDVMKDYQNAQTKYKAFIKNKVQRQVQIVKPDASPEEIEAVFKSGGGADEVITQAILKGANESIRSVYQNVADKYQDVLTLEASIAELHQMFLDFALLVEQQGELLDQIEYQVKGAANYVEDGTLQVQGAIESAKKARKYQCCML 298 M DRL E++ K + PSD V ID + + + G +P+FM FF DVE + D+ I A +++ ++ +A LAT+ +E +S EL VI+ + + ++D S++RIRDN+ TLT+KF+D MK+YQ AQ KYK+ +KNKV+RQVQIVKPDAS EI+AV +SG + + GA ESI V+ + DKYQDVL LE S+AELHQMFLD ALLVEQQGELLDQI+YQV+ AANYVE G +VQ AI+ K RK CC+L Sbjct: 1 MLDRLAEIKGK------APPSDQVAIDVEVRVPCCYSSSLMSRWANGRGVVRPKFMEVFFKDVEEMQMDLANISLASQQITELNSKAILATSNTEEQAISTELGFVIETTNKLAAHAKGLLERLKKESAERKKDKNTPLSEVRIRDNMCATLTKKFMDAMKEYQKAQQKYKSDMKNKVKRQVQIVKPDASEAEIDAVMRSGDPGSIYKSAILQGGAAESITDVFLHCQDKYQDVLKLEQSVAELHQMFLDLALLVEQQGELLDQIDYQVRTAANYVEQGNKEVQKAIKHQKSYRKKMCCLL 295
BLAST of NO02G01280 vs. NCBI_GenBank
Match: XP_002896716.1 (syntaxin, putative [Phytophthora infestans T30-4] >EEY66829.1 syntaxin, putative [Phytophthora infestans T30-4]) HSP 1 Score: 226.9 bits (577), Expect = 9.100e-56 Identity = 136/297 (45.79%), Postives = 178/297 (59.93%), Query Frame = 0 Query: 1 MNDRLTELRAKGGGGTGSMPSDSVGIDMTNLHGGPAAAAATGAAGSTQPQFMNEFFTDVEATKEDINAIKEAIRRMNTIHQEAFLATTGPKEAKLSHELNAVIQXXXXXXXXXXXXXXXXXXXTTKLRQDTRCNPSQLRIRDNLTNTLTRKFVDVMKDYQNAQTKYKAFIKNKVQRQVQIVKPDASPEEIEAVFKSGGGADEVITQAILKGANESIRSVYQNVADKYQDVLTLEASIAELHQMFLDFALLVEQQGELLDQIEYQVKGAANYVEDGTLQVQGAIESAKKARKYQCCML 298 M DRL E++ K S P D V ID+ G +P+FM FF DVE + D+ I A +++ ++ +A LAT+ +E +S EL VI+ + + ++D S++RIRDN+ TLT+KF+D MK+YQ AQ KYK+ +KNKV+RQVQIVKPDAS EI+AV +SG + + GA ESI V+ + DKYQDVL LE S+AELHQMFLD ALLVEQQGELLDQI+YQV+ AANYVE G +VQ AI+ K RK CC+L Sbjct: 1 MLDRLAEIKGK------SPPGDQVAIDV----------EVRVPRGVVRPKFMEVFFKDVEEMQMDLANISLASQQITELNSKAILATSNTEEQAISTELGIVIETTNKLAAHAKGLLERLKKESAERKKDKNTPLSEVRIRDNMCATLTKKFMDAMKEYQKAQQKYKSDMKNKVKRQVQIVKPDASEAEIDAVMRSGDPGSIYKSAILQGGAAESITDVFLHCQDKYQDVLKLEQSVAELHQMFLDLALLVEQQGELLDQIDYQVRTAANYVEQGNKEVQKAIKHQKSYRKKMCCLL 281
BLAST of NO02G01280 vs. NCBI_GenBank
Match: OQR94857.1 (syntaxin [Achlya hypogyna]) HSP 1 Score: 225.7 bits (574), Expect = 2.000e-55 Identity = 124/249 (49.80%), Postives = 164/249 (65.86%), Query Frame = 0 Query: 50 QFMNEFFTDVEATKEDINAIKEAIRRMNTIHQEAFLATTGPKEAKLSHELNAVIQXXXXXXXXXXXXXXXXXXXTTKLRQDTRCNPSQLRIRDNLTNTLTRKFVDVMKDYQNAQTKYKAFIKNKVQRQVQIVKPDASPEEIEAVFKSGGGADEVITQAILKGANESIRSVYQNVADKYQDVLTLEASIAELHQMFLDFALLVEQQGELLDQIEYQVKGAANYVEDGTLQVQGAIESAKKARKYQCCMLV 299 +FM +FF DVE + D+ I A R++ ++ +A LAT +E +S EL VI + + ++D S++RIRDN++ TLTRKF+D MK+YQ AQ K+KA +KNKV+RQVQIVKPDAS +EI+ V +S + AIL+G+ ESI+ VY N DKYQDVL LE S+AELHQMFLD ALLVEQQGE+LD IE+QVK A+NY+E G +V AI++ K RK QCC+LV Sbjct: 21 EFMEKFFVDVEDMQADLGKIVLATDRISELNHQALLATAAGEEQTISQELCLVIDATNKIAAHAKGMLELIKKESAEKKKDKTVAASEIRIRDNMSTTLTRKFMDTMKEYQKAQQKFKADMKNKVKRQVQIVKPDASEQEIDMVMRS-ADPGAIYRSAILQGSAESIKEVYMNCHDKYQDVLKLEQSVAELHQMFLDLALLVEQQGEMLDHIEFQVKAASNYIEAGNKEVTKAIKTQKSMRKKQCCLLV 268 The following BLAST results are available for this feature:
BLAST of NO02G01280 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO02G01280 ID=NO02G01280|Name=NO02G01280|organism=Nannochloropsis oceanica|type=gene|length=1325bpback to top protein sequence of NO02G01280.1 >NO02G01280.1-protein ID=NO02G01280.1-protein|Name=NO02G01280.1|organism=Nannochloropsis oceanica|type=polypeptide|length=321bpback to top Synonyms
Publications
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