NO02G01240, NO02G01240 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO02G01240 vs. NCBI_GenBank
Match: EWM30496.1 (Protein of unknown function DUF4336 [Nannochloropsis gaditana]) HSP 1 Score: 419.5 bits (1077), Expect = 9.600e-114 Identity = 204/279 (73.12%), Postives = 236/279 (84.59%), Query Frame = 0 Query: 47 PPSTPTK-----KLRPPVPLPEQDQIYARSLLPPKHKPTTLIISDEKRGLWVFEQPFVLGVVDVKNRMSVLRLSNGGFAIYSPLAATPECIAMLQNLIKDEKLSLKSAWFLVPSSFPEHHESLITWREVFPEARVVSVHPRINVIAEHLFEGSGAGGAGEQLPVELREDLGVGVLQTLLLRELIVCHKPSRTLLVSDSGFYINEEYSTSLTKGMTKLQGIYDRFVTPPFFRLGTDRKEGRALYGKIKEWEFDKIVTCHAELVPEGEGKEAFVEGYKHLA 321 PP TPT+ L P V + +DQIY SLLPP+ KPTTL+ISD KRGLWVFEQPFVLGVVDVKNRMSVLRLS+GGFA+YSPLAATPECI ML++L+K EKLSL SAWF+VPSSFPEHHESL+TWREVFPEARVVSVHPRINVI+E L EG A QLP LR+DL V V +T LLRE+++ HKPS+TL V+DSGFYINEEYS SLT+G+T+LQGIYDRFVTPPFFRLG ++KEG+ LY ++K+W FDKIVTCHA LV EG+GKEAF+EGY+HLA Sbjct: 110 PPPTPTRLTPKSSLPPAVDVGARDQIYEPSLLPPRKKPTTLLISDRKRGLWVFEQPFVLGVVDVKNRMSVLRLSDGGFALYSPLAATPECIDMLKSLVKSEKLSLSSAWFMVPSSFPEHHESLVTWREVFPEARVVSVHPRINVISEFLLEGPST-DAPSQLPFPLRKDLDVAVYETPLLREMVLTHKPSKTLFVADSGFYINEEYSNSLTRGITQLQGIYDRFVTPPFFRLGMNKKEGKRLYERVKDWGFDKIVTCHAALVEEGKGKEAFLEGYRHLA 387
BLAST of NO02G01240 vs. NCBI_GenBank
Match: WP_044187375.1 (DUF4336 domain-containing protein [Hyalangium minutum] >KFE68842.1 Methanol oxidation protein [Hyalangium minutum]) HSP 1 Score: 102.4 bits (254), Expect = 2.600e-18 Identity = 74/230 (32.17%), Postives = 113/230 (49.13%), Query Frame = 0 Query: 91 LWVFEQPFVLGVVDVKNRMSVLRLSNGGFAIYSPLAATPECIAMLQNLIKDEKLSLKSAWFLVPSSFPEHHESLITWREVFPEARVVSVHPRINVIAEHLFEGSGAGGAGEQLPVELREDLGVGVLQTLLLRELIVCHKPSRTLLVSDSGFYINEEYSTSLTKGMTKLQGIYDRFVTPPFFR-LGTDRKEGRALYGKIKEWEFDKIVTCHAELVPEGEGKEAFVEGYKHL 320 L+V E PF +G +++ RM+V+RL GG I+SP+ E A ++ +L +LV + EHH +L W FPEARVV++ P + +L G A E E+ + + + E + H+PSRTLLV+D F+I S LT+ KL G Y + + L DR+ R + W+F+++V CH E++ G GK A G+ L Sbjct: 9 LYVQEVPFRIGGMELGGRMTVIRLPEGGLWIHSPVRMDAETRAAVE--------ALGPVRYLVAPNL-EHHLNLPAWAAAFPEARVVAL-PGLRKKQPNLRIDVELGAAPEAGYAEVIAQQHLRGMPR--MEEFVFLHRPSRTLLVTDVAFHIRHSPSW-LTRTYLKLSGTYGKLAPTMLLKSLVKDRQALRTSLEAVWSWDFERVVVCHGEVLESG-GKAALRSGFAWL 224
BLAST of NO02G01240 vs. NCBI_GenBank
Match: EWM26165.1 (Protein of unknown function DUF4336 [Nannochloropsis gaditana]) HSP 1 Score: 100.5 bits (249), Expect = 9.800e-18 Identity = 71/256 (27.73%), Postives = 126/256 (49.22%), Query Frame = 0 Query: 74 PPKHKPTTLIISDEKRGLWVFEQPFVLGVVDVKNRMSVLRLSNGGFAIYSPLAATPECIAMLQNLIKDEKLSLKSAWFLVPSSFPEHHESLITWREVFPEARVVSVHPRINVIAEHLFEGSGAGGAGEQLPVELREDLGVGVLQTLL-----LRELIVCHKPSRTLLVSDSGF-YINEEYSTSLTKGM-TKLQGIYDRFVTPPFFRL-GTDRKEGRALYGKIKEW-EFDKIVTCHAELVPEGE-GKEAFVEGYKHL 320 PP +PT+L+ SD + +W FEQPF+ ++K RMSV + +YSP+AATPEC M++N++ + ++ S+ +H L WR P A+++++ PR + L + S G LP+ + V LL RE+++ HKPS+TLL +D+ + ++ +S ++ KL G+ P +F R + + +++ W E ++ + H + +P G+E E K + Sbjct: 73 PPSVRPTSLVFSDAQHKVWTFEQPFIT-TTNIKTRMSVFKCET-SIVMYSPIAATPECCDMVRNIVGG-----MPTYIIMQSNAIDHTIFLNGWRRAVPSAQILNISPREGDL-PMLKDSSSGGETAIILPLPFQRGNQPIVEAALLDIEPFFREIVLFHKPSKTLLCADAIWRVVSPTFSPNIVAATGWKLFGVSGVSRFPYWFYFPRRKRAQVQQFVDQVQAWGEIERCLPGHLDAIPAAAVGEEQTAEEVKRI 320
BLAST of NO02G01240 vs. NCBI_GenBank
Match: WP_014400027.1 (DUF4336 domain-containing protein [Corallococcus coralloides] >AFE07421.1 hypothetical protein COCOR_07244 [Corallococcus coralloides DSM 2259]) HSP 1 Score: 95.9 bits (237), Expect = 2.400e-16 Identity = 77/239 (32.22%), Postives = 114/239 (47.70%), Query Frame = 0 Query: 93 VFEQPFVLGVVDVKNRMSVLRLSNGGFAIYSPLAATPECIAMLQNLIKDEKLSLKSAWFLV-PSSFPEHHESLITWREVFPEARVVSVHPRINVIAEHLFEGSGAGGAGEQLPVELREDLGVGVLQTLL----------LRELIVCHKPSRTLLVSDSGFYINEEYSTSLTKGMTKLQGIYDRFVTPPFFRLGT-DRKEGRALYGKIKEWEFDKIVTCHAELVPEGEGKEAFVEGYKHL 320 VF+ PF L V V RM+VLRL +GG ++SP+A TPE A + +L FLV P+ F HH L W FP+ARVV+ +G A ++ +EL EDL +L L E + H+PSRT +V+D F+ L + L G+ RF P F RL T D + RA + +W+ +++V CH +++ G G++A + + L Sbjct: 18 VFDAPFSLFGVPVGGRMTVLRLPDGGLWVHSPVAFTPERRAAV--------AALGPVRFLVAPNLF--HHLHLPDWAAAFPDARVVAP------------KGLRAKQPALRIDLEL-EDLPDPAWAPVLDQMNVRGMPQLNEFLFFHRPSRTAIVTDLAFHYAHAEGLKL-RAYLWLDGVLGRFAAPRFLRLFTKDPEAVRASLQRAMKWDVERVVVCHGQVLERG-GQKALHDAFSRL 231
BLAST of NO02G01240 vs. NCBI_GenBank
Match: WP_047860656.1 (DUF4336 domain-containing protein [Archangium gephyra] >AKJ07702.1 Methanol oxidation genes, glmU-like protein [Archangium gephyra]) HSP 1 Score: 93.2 bits (230), Expect = 1.600e-15 Identity = 70/233 (30.04%), Postives = 114/233 (48.93%), Query Frame = 0 Query: 91 LWVFEQPFVLGVVDVKNRMSVLRLSNGGFAIYSPLAATPECIAMLQNLIKDEKLSLKSAWFLVPSSFPEHHESLITWREVFPEARVV------SVHPRINVIAEHLFEGSGAGGAGEQLPVELREDLGVGVLQTLLLRELIVCHKPSRTLLVSDSGFYINEEYSTSLTKGMTKLQGIYDRFVTPPFFR-LGTDRKEGRALYGKIKEWEFDKIVTCHAELVPEGEGKEAFVEGY 317 L+V + PF +G + + RM+V+RL +GG ++SP+ E K +L FLV + HH SL W +P A+V+ + P + + E S G+ +EL G+ L+ E H+PSRTLL++D F I+E S LT+ KL G+Y + F + + D+ RA ++ W+F+++V CH +++ +G GKEA E + Sbjct: 9 LFVLDVPFRIGGMALGGRMTVIRLPDGGLWLHSPVKLDAEA--------KSAVDALGPVRFLVAPN-TMHHLSLGDWAAAYPTAKVLAPAGLRAKRPELRIDVEL----SDVMDVGQSPSIELLLAHGIPKLE-----EFAFFHRPSRTLLLTDLAFNIHETPSW-LTRTYLKLSGVYGKLGATWFLKSMVKDKAALRAWRERVLGWDFERVVPCHGQVLEQG-GKEAMREAF 221
BLAST of NO02G01240 vs. NCBI_GenBank
Match: OBT65372.1 (hypothetical protein VE03_06057 [Pseudogymnoascus sp. 23342-1-I1]) HSP 1 Score: 92.4 bits (228), Expect = 2.700e-15 Identity = 77/273 (28.21%), Postives = 117/273 (42.86%), Query Frame = 0 Query: 71 SLLPPKHKPTTLIISDEKRGLWVFEQPFV-LGVVDVKNRMSVLRLSNGGFAIYSPLAATPECIAMLQNLIKDEKLSLKSAWFLVPSSFPEHHESLITWREVFPEARVVSVHPRINVIAEHLFEGSGAGGAGEQLPV----------------ELREDLGVGVLQTLLLRELIVCHKPSRTLLVSDSGFYI--NEEYSTS--------LTKGMTKLQGIYDRFVTPP----FFRLGTDRKEGRALYGKIKEWEFDKIVTCHAELVPEGEGKEAF 313 S L P + ++I D + PF G+ V R +++RL++G +++SP A TPE A L L K + L + + P EHH + W +P A+V+ V A + GEQ+P E D + + +EL+ +KP RTL+V+D F + E+YS + LTK L G R + + DRK G+I W+F++IV CH ++V EG GKE F Sbjct: 3 SKLVPSNPSAVMVIRDITPNITTLSVPFARFGLFRVGGRGTIVRLTSGALSVFSPTALTPEVRAKL--LEKGDNLK----YIIAPDI--EHHIFISEWARAYPSAQVIGVEGLPEKRAAAAKDPKSPSHGGEQVPFATVFTQKQKGQVRISEEFDRDFEYEYVPEHMNKELVFLYKPDRTLIVADYLFNLPATEQYSRTGEPADKGVLTKLFGALMGTQGRALGQKRYLWYAGSAADRKGFGESAGRIAGWDFERIVPCHGDVV-EGGGKEVF 266
BLAST of NO02G01240 vs. NCBI_GenBank
Match: WP_090306867.1 (DUF4336 domain-containing protein [Natronorubrum texcoconense] >SDK21351.1 protein of unknown function [Natronorubrum texcoconense]) HSP 1 Score: 92.0 bits (227), Expect = 3.500e-15 Identity = 68/233 (29.18%), Postives = 109/233 (46.78%), Query Frame = 0 Query: 92 WVFEQPFVLGVVDVKNRMSVLRLSNGGFAIYSPLAATPECIAMLQNLIKDEKLSLKSAWFLVPSSFPEHHESLITWREVFPEARVVSV----HPRINVIAEHLFEGSGAGGAGEQLPVELREDLGVGVLQTLLLRELIVCHKPSRTLLVSDSGFYINEEYSTSLTKGMTKLQGIYDRFVTPPFFRLGTDRKEG-RALYGKIKEWEFDKIVTCHAELVPEGEGKEAFVEGYKHL 320 W +E+ V++ MSV++LS+GG + SP TPE A L + L F+ P+S H + +R +P A +++ R ++ +HL + G + V V+ L E+ H+PSRTL++ D GF+I E S T+ + + IY R P FRL + ++ R + W+FD++V H E++ G GK A +EGY L Sbjct: 10 WTYEESLRFFGVELGRIMSVMKLSSGGLFVQSPAELTPELKATLDD--------LGEVRFVAPASKLHGHLYMEQYRAAYPNAELLAAPGLPARRSDLRFDHLLGDTPDPRWGTDID-------QVAVVGHRWLTEIAYFHRPSRTLILGDVGFHIGER-SPLKTRLVARALRIYQRIGPPIEFRLTIENEDSFRRSIRDVLAWDFDRVVPGHGEILETG-GKRAVLEGYDWL 225
BLAST of NO02G01240 vs. NCBI_GenBank
Match: WP_008163953.1 (DUF4336 domain-containing protein [Natronorubrum sulfidifaciens] >ELY43511.1 hypothetical protein C495_14036 [Natronorubrum sulfidifaciens JCM 14089]) HSP 1 Score: 91.7 bits (226), Expect = 4.600e-15 Identity = 67/230 (29.13%), Postives = 109/230 (47.39%), Query Frame = 0 Query: 91 LWVFEQPFVLGVVDVKNRMSVLRLSNGGFAIYSPLAATPECIAMLQNLIKDEKLSLKSAWFLVPSSFPEHHESLITWREVFPEARVVSVHPRINVIAEHLFEGSGAGGAGEQLPVELREDLGVGVLQTLLLRELIVCHKPSRTLLVSDSGFYINEEYSTSLTKGMTKLQGIYDRFVTPPFFRLG-TDRKEGRALYGKIKEWEFDKIVTCHAELVPEGEGKEAFVEGYKHL 320 +W +E+P +++ M+V+RLS+GG + SP TPE A L + L F+ P+S H + +R +P+A +++ P + L G + P + V ++ L EL H+PSRT+++ D GF+I E S T+ + + +Y+R P FRL + R + WEFD++V H E++ G GK A +EGY L Sbjct: 9 VWTYEEPLRFLGLEIGRIMTVIRLSSGGLFVQSPAELTPELRAALDD--------LGDVRFVAPASKLHGHLYMEQYRATYPDAELLAA-PGLPARRPDLGFDQLLGDTPD--PRWAPDIDQVAIVGHRWLTELAYFHRPSRTVILGDVGFHIGEG-SPLTTRLVARALRVYERVGPPLEFRLTIANEASFRRSIQDVLAWEFDRVVPGHGEIIETG-GKRAVLEGYDWL 225
BLAST of NO02G01240 vs. NCBI_GenBank
Match: KLJ12054.1 (hypothetical protein EMPG_12811 [Emmonsia parva UAMH 139]) HSP 1 Score: 91.3 bits (225), Expect = 6.000e-15 Identity = 69/270 (25.56%), Postives = 122/270 (45.19%), Query Frame = 0 Query: 71 SLLPPKHKPTTLIISDEKRGLWVFEQPFV-LGVVDVKNRMSVLRLSNGGFAIYSPLAATPECIAMLQNLIKDEKLSLKSAWFLVPSSFPEHHESLITWREVFPEARVVS---------VHPRINVIA-EHLFEGSGAGGAGEQLPVELREDLGVGVLQTLLLRELIVCHKPSRTLLVSDSGFYI--NEEYSTSLTKGMTKLQGIYDRFVT------PP---------FFRLGTDRKEGRALYGKIKEWEFDKIVTCHAELVPEGEGKEAF 313 S L P H ++I + + PF G + R +++RL +G A++SP+A TP+ + +L + K + + P EHH + W+ +P A++++ +P I +H+F + G ++ E D V + + RE+++ HKPS+TL+ +D F + E++S S G + QGI + + PP + DRK I+ W+FD+I+ CH +++ G GKE F Sbjct: 3 SKLVPPHPEDVMVIRKVQPDIITLNVPFYRFGYARIGGRCTIVRLQSGSLAVFSPVALTPDAREAVNSLGGNVK------YIIAPDM--EHHIFVSPWKGAYPNAQIIAPEGLKEKREKNPETKGIGFDHIFTAANKGTL--KVSDEFHADFDVEYVNSHPSREIVLLHKPSKTLIEADLLFNLPATEQFSKS---GESATQGILTKIFSAIQTTKPPAMGQRRFIWYILSAKDRKGFAQSAATIEGWDFDRIIPCHGDVIESG-GKEIF 258
BLAST of NO02G01240 vs. NCBI_GenBank
Match: WP_058580952.1 (DUF4336 domain-containing protein [Haloprofundus marisrubri] >KTG10628.1 hypothetical protein AUR64_08155 [Haloprofundus marisrubri]) HSP 1 Score: 91.3 bits (225), Expect = 6.000e-15 Identity = 62/241 (25.73%), Postives = 110/241 (45.64%), Query Frame = 0 Query: 80 TTLIISDEKRGLWVFEQPFVLGVVDVKNRMSVLRLSNGGFAIYSPLAATPECIAMLQNLIKDEKLSLKSAWFLVPSSFPEHHESLITWREVFPEARVVSVHPRINVIAEHLFEGSGAGGAGEQLPVELREDLGVGVLQTLLLRELIVCHKPSRTLLVSDSGFYINEEYSTSLTKGMTKLQGIYDRFVTPPFFRLG-TDRKEGRALYGKIKEWEFDKIVTCHAELVPEGEGKEAFVEGYKHL 320 T+ ++ GLW + +P +++ M V+RLS+GG IYSP T + ++ L F+VP+S H + +RE +P A +++ + F+G G + +L + +G L E+ H+PSRTL++ D +++ + S T+ + +L G+Y R PP R + R KI WEFD+++ H ++ G G+ A + + L Sbjct: 4 TSDVLDHLDTGLWTYREPLRFFGLEIGRVMVVVRLSSGGLLIYSPAELTAD--------LRGALAELGDVRFVVPASKLHGHLYMEQYREAYPRAELLAAPGLDRRRTDLDFDGLLGGTPDPRWSADLDQTAFLG---HRWLTEIEFYHRPSRTLILGDICYHVTGDAPLS-TRAVARLAGMYGRLAVPPDLRRTIVNEDAARNSVRKILAWEFDRVLVGHGSVLESG-GRAAVADAFDWL 231 The following BLAST results are available for this feature:
BLAST of NO02G01240 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO02G01240 ID=NO02G01240|Name=NO02G01240|organism=Nannochloropsis oceanica|type=gene|length=963bpback to top protein sequence of NO02G01240.1 >NO02G01240.1-protein ID=NO02G01240.1-protein|Name=NO02G01240.1|organism=Nannochloropsis oceanica|type=polypeptide|length=321bpback to top Synonyms
Publications
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