NO02G01180, NO02G01180 (gene) Nannochloropsis oceanica
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Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO02G01180 vs. NCBI_GenBank
Match: XP_005855109.1 (prolyl 4-hydroxylase, partial [Nannochloropsis gaditana CCMP526] >EKU21252.1 prolyl 4-hydroxylase, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 564.3 bits (1453), Expect = 3.900e-157 Identity = 259/431 (60.09%), Postives = 332/431 (77.03%), Query Frame = 0
Query: 12 LAVLPTLAQAIHYFTGLDSLAGLEIVGITDSNGMVVKNTLVSFSNKQCIQDLYDLDFPFNFINLPSTTHELANVLVETPSNELMDFFDIHDCKSFIYFTAGDSLQAKGTKLTPTSGHELDDFFWEKQRLPNVKIRNDLEKPVNVYWESWDGQPREVSIMELVPGQEQSFGSFLSHTLIFRDVENNMRLMARAVITDGSKPIVISDLLAGPADTEVLQLTDHQVKVWRGRLRTNISRLKQNEAQPPNVRTFTDVGFRKLRIPANLLRHLQEFLEQNEGKRVDEGWNEDDLHVNFYESMTTVVALDHEMRELVFGTIKPILESWIGGEKLDPTSTYGIRRYYNGSVLRDHVDIGATHIVSAILNLGQDVDKVWPLQILDHEGRRHFIEMVAGDMCLYESATSIHGRTQAMVGRTFDNVFTHFQPVKPFDVVAA 443
+A+ P A A++YFTGLDS ++ +GITD G++ KNTL SFSN +C+ DL+D+ FPF F++LP THELAN+LVETP NELM FF++ DCKSF FTAGDS+ KG K+ P+ L+D FW QRLPN++IRNDL++ V+V+WE DG E ++ L GQE+ F SFL IFRD ++MRL+AR VITDG+KP+++S L G DTE LQL ++Q VWRGR TN++RL+QNE QP V+ +T GF+K+ +P+ L L E+L ++E +R+DE W++DDLHVNFYE MTT+V D +MR++VF T+KPILESW+GGEKL PTSTYGIRRYYNGS+LRDHVDIG THIVSAILN+ QDVD+VWPL ILDH+GRRHFI+M G+MCLYESAT++HGRTQA+ GR FDN+F HF P PF V A+
Sbjct: 30 VALGPYPAAAVNYFTGLDSFVAMKALGITDGAGVLQKNTLFSFSNNECVHDLHDIGFPFIFMDLPGATHELANILVETPPNELMSFFNVSDCKSFYSFTAGDSIHDKGNKIVPSDQASLEDAFWHDQRLPNLRIRNDLQRVVDVFWELRDGSLTEFRVVRLNSGQEERFRSFLGDIFIFRDAYDDMRLLARTVITDGNKPLILSQTLMGKGDTETLQLNENQADVWRGRQNTNVARLRQNELQPSTVKKYTGGGFKKMLMPSYLHTRLLEYLARHEDQRMDEPWHKDDLHVNFYEKMTTIVYTDRDMRDIVFKTLKPILESWVGGEKLMPTSTYGIRRYYNGSILRDHVDIGRTHIVSAILNVRQDVDEVWPLSILDHQGRRHFIDMAPGEMCLYESATALHGRTQALRGRYFDNLFAHFAPAAPFTVNAS 460
BLAST of NO02G01180 vs. NCBI_GenBank
Match: EWM30492.1 (hypothetical protein Naga_100013g87 [Nannochloropsis gaditana]) HSP 1 Score: 563.5 bits (1451), Expect = 6.700e-157 Identity = 259/431 (60.09%), Postives = 331/431 (76.80%), Query Frame = 0
Query: 12 LAVLPTLAQAIHYFTGLDSLAGLEIVGITDSNGMVVKNTLVSFSNKQCIQDLYDLDFPFNFINLPSTTHELANVLVETPSNELMDFFDIHDCKSFIYFTAGDSLQAKGTKLTPTSGHELDDFFWEKQRLPNVKIRNDLEKPVNVYWESWDGQPREVSIMELVPGQEQSFGSFLSHTLIFRDVENNMRLMARAVITDGSKPIVISDLLAGPADTEVLQLTDHQVKVWRGRLRTNISRLKQNEAQPPNVRTFTDVGFRKLRIPANLLRHLQEFLEQNEGKRVDEGWNEDDLHVNFYESMTTVVALDHEMRELVFGTIKPILESWIGGEKLDPTSTYGIRRYYNGSVLRDHVDIGATHIVSAILNLGQDVDKVWPLQILDHEGRRHFIEMVAGDMCLYESATSIHGRTQAMVGRTFDNVFTHFQPVKPFDVVAA 443
+A+ P A A++YFTGLDS ++ +GITD G++ KNTL SFSN +C+ DL+D+ FPF F++LP THELAN+LVETP NELM FF++ DCKSF FTAGDS+ KG K+ P+ L+D FW QRLPN++IRNDL++ V+V+WE DG E ++ L GQE+ F SFL IFRD ++MRL+AR VITDG+KP+++S L G DTE LQL ++Q VWRGR TN++RL+QNE QP V+ +T GF+K+ +P+ L L E+L ++E +R+DE W++DDLHVNFYE MTT+V D +MR++VF T+KPILESW+GGEKL PTSTYGIRRYYNGS+LRDHVDIG THIVSAILN+ QDVD+VWPL ILDH+GRRHFI M G+MCLYESAT++HGRTQA+ GR FDN+F HF P PF V A+
Sbjct: 40 VALGPYPAAAVNYFTGLDSFVAMKALGITDGAGVLQKNTLFSFSNSECVHDLHDIGFPFIFMDLPGATHELANILVETPPNELMSFFNVSDCKSFYSFTAGDSIHDKGNKIVPSDQASLEDAFWHDQRLPNLRIRNDLQRVVDVFWELRDGSLTEFRVVRLNSGQEERFRSFLGDIFIFRDAYDDMRLLARTVITDGNKPLILSQTLMGKGDTETLQLNENQADVWRGRQNTNVARLRQNELQPSTVKKYTGGGFKKMLMPSYLHTRLLEYLARHEDQRMDEPWHKDDLHVNFYEKMTTIVYTDRDMRDIVFKTLKPILESWVGGEKLMPTSTYGIRRYYNGSILRDHVDIGRTHIVSAILNVRQDVDEVWPLSILDHQGRRHFINMAPGEMCLYESATALHGRTQALRGRYFDNLFAHFAPAAPFTVNAS 470
BLAST of NO02G01180 vs. NCBI_GenBank
Match: EWM21003.1 (hypothetical protein Naga_100081g21 [Nannochloropsis gaditana]) HSP 1 Score: 237.7 bits (605), Expect = 8.400e-59 Identity = 139/452 (30.75%), Postives = 224/452 (49.56%), Query Frame = 0
Query: 12 LAVLPTLAQAIHYFTGLDSLAGLEIVGITDSN-GMVVKNTLVSFSNKQCIQDLYDLDFPFNFINLPSTTHELANVLVETPSNELMDFFDIHDCKSFIYFTAGDSLQAKGTKLTPTSGHELDDFFWEKQRLPNVKIRNDLEKPVNVYWESWDGQPREVSIMELVPGQEQSFGSFLSHTLIF--RDVENNMRLMARAVITDGSKPIVISDLLAGPAD--------------------------TEVLQLTDHQVKVWRGRLRTNISRLKQNEAQPPNVRTFTDVGFRKLRIPANLLRHLQEFLEQNEGKRVDEGWNEDDLHVNFYESMTTVVALDHEMRELVFGTIKPILESWIGGEKLDPTSTYGIRRYYNGSVLRDHVDIGATHIVSAILNLGQDVDKVWPLQILDHEGRRHFIEMVAGDMCLYESATSIHGRTQAMVGRTFDNVFTHFQPV 435
+ +LP QA+++F L+ L LE++G+ + G+ K+ L+ FS+ C Q + L FP + L E V+++ + EL ++I C ++Y G + + +L ++ + L +++ NDL V++ WE ++ + G+ S +F +H L F + R R + + + +SD L A+ T+ +QL + + +WRGR N R+ +NE QP +T +GF+K RIP + + L + G+ + E W + D H NF+E+ +T+V L + +F + P L W GG KL PTS YGIR Y+NGS LR+HVD G THI+SAI+N+ QDV++ W L +DH RHF+ + GD YESA+ +HGR + G+ F N F HF+ V
Sbjct: 12 MLLLPLALQAVNHFKDLNRLEDLELLGLVQKDTGVAEKHLLLGFSSSACEQSVRGLGFPSEYSVLGEHV-ETGEVMLDR-NTELPGVYNISSCNEYVYVPRGGRTREDYDVIKAVDKLQLHNWLFTHLAL-TMEVINDLPFDVSIKWEDTGRSQAPQDLISIPRGRTSSINTFETHHLRFVSHQPGSEPRQFLRVRVDGSTNTLRLSDFLTEEANQQCLNPQDCGAKTVTTLPNVNNQHGSTDDVQLVEEDMNIWRGRDVENKGRVVRNEVQPKTKPRYTALGFKKTRIPDAVYQVLLN--RYHSGEHILEPWPKSDCHTNFFEAPSTMVYLSDAEKADIFSGMMPNLSKWAGGVKLHPTSCYGIRIYHNGSWLREHVDTGDTHIISAIMNVDQDVEEDWLLTFIDHNDNRHFVTLEPGDALYYESASGLHGRPIPLKGKLFANAFVHFKVV 458
BLAST of NO02G01180 vs. NCBI_GenBank
Match: CBN77694.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 156.4 bits (394), Expect = 2.500e-34 Identity = 92/301 (30.56%), Postives = 147/301 (48.84%), Query Frame = 0
Query: 137 KQRLPNVKIRNDLEKPVNVYWESWDGQPREVSIMELVPGQEQSFGSFLSHTLIFRDVENNMRLMARAVITDGSKPIVISDLLAGPADTEVLQLTDHQVKVWRGRLRTNISRLKQNEAQPPNVRTFTDVGFRKLRIPANLLRHLQEFLEQNEGKRVDEGWNEDDLHVNFYESMTTVVALDH-EMRELVFGTIKPILESWIGGEKLDPTSTYGIRRYYNGSVLRDHVDIGATHIVSAILNLGQDVDKVWPLQILDHEGRRHFIEMVAGDMCLYESATSIHGRTQAMVGRTFDNVFTHFQPVKP 437
K + +V I N++ ++++++ WD + I L PG E S+ + ++ + E + V G + A T T + R + + RL N QP + FT+VGF+K+ +P ++ ++ + E+N+ + G + T ++ +++E +FG ++PILE W G E L T+ YG+R Y N S L +HVD ATH VS I+ + QDV++ WPL I DH G + I M D+ LYESAT +HGR G + N F HF+P P
Sbjct: 159 KTQQVSVGIVNEMGFDLDIHYQWWDEPVKPTHIRTLTPGTENWMLSYKTTLVLALNKETQEEVSRFVVKGHGLFTVAERSCTAETCGTSEGAETPQDIASRNARRQMDQGRLVNNRKQPEGLPRFTEVGFKKITVPDDVWDLVKTYYEENKRR---SGLRTTSSPTTWRRRATWSTCRENGKLKEQIFGGLRPILEEWSGVE-LVQTACYGVRVYTNTSWLANHVDTKATHAVSVIMQVDQDVEEDWPLMIYDHAGNDYNITMKPRDLVLYESATCVHGRPSTFHGNYYANAFVHFKPKDP 455
BLAST of NO02G01180 vs. NCBI_GenBank
Match: XP_009032975.1 (hypothetical protein AURANDRAFT_70663 [Aureococcus anophagefferens] >EGB11853.1 hypothetical protein AURANDRAFT_70663 [Aureococcus anophagefferens]) HSP 1 Score: 152.1 bits (383), Expect = 4.600e-33 Identity = 78/209 (37.32%), Postives = 120/209 (57.42%), Query Frame = 0
Query: 239 GRLRTN-ISRLKQNEAQPPNVRTFTDVGFRKLRIPANLLRHLQEFLEQNEGKRVDEGWNEDDLHVNFYESMTTVVALDH--------EMRELVFGTIKPILESWIGGEKLDPTSTYGIRRYYNGSVLRDHVDIGATHIVSAILNLGQDVDKVWPLQILDHEGRRHFIEMVAGDMCLYESATSIHGRTQAMVGRTFDNVFTHFQPVKPFD 439
G R+N SR+ N Q P R FT++GF K+R P N+ + F + ++ E W + +VN +++ + +V+L+ ++ ++ KPILE+W G+ L PTS YGIR+Y+ G +L HVD + S I+N+ QDVD+ WP++++ H+G + + + GDM LYES T +HGR + G F NVF HF PV P D
Sbjct: 1423 GSCRSNEESRMAMNRDQIPRQRNFTELGFAKIRAPENVYGPARAFWDLHKDSGTSEAWPAGNTYVNHWKADSHMVSLEDRRWQPLGLRTKDKIWAGAKPILEAWT-GQTLKPTSLYGIRKYFRGGILATHVD-RLPLVTSCIINVDQDVDEPWPIEVVGHDGVAYNVTLEPGDMALYESHTVLHGRPFPLKGNFFANVFVHFIPVDPND 1629
BLAST of NO02G01180 vs. NCBI_GenBank
Match: OEU17997.1 (hypothetical protein FRACYDRAFT_238428 [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 150.2 bits (378), Expect = 1.800e-32 Identity = 82/207 (39.61%), Postives = 118/207 (57.00%), Query Frame = 0
Query: 245 ISRLKQNEAQPPNVRTFTDVGFRKLRIPANLLRHLQEFLEQNEGKRVDEGWNEDDLHVNFYESMTTVVALDHEMRELVFGTIKPI--------LESWIGG-EKLDPTSTYGIRRYYNGSVLRDHVDIGATHIVSAILNLGQDVDKVWPLQILDHEGRRHFIEMVAGDMCLYESATSIHGRTQAMVGRTFDNVFTHFQPVKPFDVVAA 443
++RL+ N+ QP ++ T G+ K PA+L++ L +F EQN+ ++ E W E ++ N ++S T +V + E E T+K +E W GG KL P S YGIR Y G+VL HVD + S I+N+ QDVD+ WPL++ D G I M GDM LYES + IHGR + GR + NVF HF+P + +D+ AA
Sbjct: 105 LTRLEMNQRQPQSMVNMTTTGYMKTTAPASLMKLLTKFWEQNKEEKEMEEWGEGSIYTNHWKSPTHMVNVGDEYLEGGGKTLKKAIWDAAVTGMEEWTGGVAKLRPVSLYGIREYTEGAVLSPHVD-RVPLVSSGIVNVAQDVDEDWPLEVYDRNGHAVNITMKPGDMILYESHSLIHGRPFPLKGRYYANVFIHFEPFEGWDINAA 310
BLAST of NO02G01180 vs. NCBI_GenBank
Match: OEU20670.1 (hypothetical protein FRACYDRAFT_180822 [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 149.1 bits (375), Expect = 3.900e-32 Identity = 83/216 (38.43%), Postives = 120/216 (55.56%), Query Frame = 0
Query: 246 SRLKQNEAQPPNVRTFTDVGFRKLRIPANLLRHLQEFLEQNEGKRVDEGWNEDDLHVNFYESMTTVVAL--DHEMRELVFGTIKPILESWIGGEKLDPTSTYGIRRYYNGSVLRDHVDIGATHIVSAILNLGQDVDKVWPLQILDHEGRRHFIEMVAGDMCLYESATSIHGRTQAMVGRTFDNVFTHFQPVKPFDVVAAEGVHAVVHPMLTEEQEW 460
SRLK N QP +V +T G+ K R+P++L ++EF +N E W ++ N + + T+V L D + + IKPILE W G+ L P STYGIR Y+NGS+L HVD + S I+ + QDVD+ WPL++ H+ + I M GDM LYES + IHGR M+G F N F HF+P P + A ++ + P + ++ W
Sbjct: 95 SRLKMNANQPKSVFNYTKDGYTKTRVPSDLFDLIKEFFNKNRHLAKIE-WQSHTVYHNAWIAPPTMVGLNKDKTLINQIQEQIKPILEEWT-GQHLSPVSTYGIRMYHNGSILAPHVD-RMPLVASVIIQVDQDVDEPWPLEVYGHDDKATNITMEPGDMVLYESHSVIHGRPFPMIGNFFANCFIHFEPYAPLE-GEAHDPNSDIPPYIVKDSVW 306
BLAST of NO02G01180 vs. NCBI_GenBank
Match: XP_009033934.1 (hypothetical protein AURANDRAFT_70898 [Aureococcus anophagefferens] >EGB11582.1 hypothetical protein AURANDRAFT_70898 [Aureococcus anophagefferens]) HSP 1 Score: 148.7 bits (374), Expect = 5.100e-32 Identity = 83/185 (44.86%), Postives = 102/185 (55.14%), Query Frame = 0
Query: 251 NEAQPPNVRTFTDVGFRKLRIPANLLRHLQEFLEQNEGKRVDEGWNEDDLHVNFYESMTTVVALDHEMRELVFGTIKPILESWIGGE--KLDPTSTYGIRRYYNGSVLRDHVDIGATHIVSAILNLGQDVDKVWPLQILDHEGRRHFIEMVAGDMCLYESATSIHGRTQAMVGRTFDNVFTHFQP 434
N QPP V FTDVGF IP D+H + A D ++R V + ILE+WIG + L PTS YGIRRY NGS L+ HVD+ ATH VSAILN+ QDVD+ WPLQI DH G H + M G+M LYES+ SIHGR + G ++DN+F HF+P
Sbjct: 1680 NRDQPPTVPAFTDVGFAVRPIPR-------------------------DVHA------ALLAARDDKVRTQVNDACRAILEAWIGPKWGGLVPTSVYGIRRYTNGSTLQAHVDVVATHAVSAILNVDQDVDEDWPLQIRDHGGDVHAVVMKPGEMVLYESSKSIHGRLVPLNGASYDNIFVHFRP 1833
BLAST of NO02G01180 vs. NCBI_GenBank
Match: OEU09367.1 (hypothetical protein FRACYDRAFT_277285 [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 147.1 bits (370), Expect = 1.500e-31 Identity = 70/202 (34.65%), Postives = 119/202 (58.91%), Query Frame = 0
Query: 241 LRTNISRLKQNEAQPPNVRTFTDVGFRKLRIPANLLRHLQEFLEQNEGKRVDEGWNEDDLHVNFYESMTTVVALDHE--------MRELVFGTIKPILESWIGGEKLDPTSTYGIRRYYNGSVLRDHVDIGATHIVSAILNLGQDVDKVWPLQILDHEGRRHFIEMVAGDMCLYESATSIHGRTQAMVGRTFDNVFTHFQPV 435
++ + R+ + QP +++ +T VG++K+R P + +Q F E+N+ DE W + + N +E+ + +V+++ +++ ++ K + W G++L S YG+R YY GSVL HVD + SAI+N+ QDVD+ WPL+++ H+GR + M+ GDM LYES + IHGR + GR F N+F HF+P+
Sbjct: 105 VQNELDRIAMTKRQPQSMQNYTKVGYKKIRAPKAVWDLVQAFWEKNKAYPKDENWGIGNTYTNNWETHSKMVSVEDSGLRGGGSGLKQKIWDAAKETISDW-NGQELTQCSLYGVRVYYEGSVLAPHVD-RLPLVSSAIINVAQDVDEPWPLEVIGHDGRAENVTMMPGDMVLYESHSVIHGRPFPLKGRFFANLFVHFEPI 304
BLAST of NO02G01180 vs. NCBI_GenBank
Match: GAX21456.1 (hypothetical protein FisN_10Hh035 [Fistulifera solaris]) HSP 1 Score: 146.7 bits (369), Expect = 2.000e-31 Identity = 70/201 (34.83%), Postives = 118/201 (58.71%), Query Frame = 0
Query: 242 RTNISRLKQNEAQPPNVRTFTDVGFRKLRIPANLLRHLQEFLEQNEGKRVDEGWNEDDLHVNFYESMTTVVALD--------HEMRELVFGTIKPILESWIGGEKLDPTSTYGIRRYYNGSVLRDHVDIGATHIVSAILNLGQDVDKVWPLQILDHEGRRHFIEMVAGDMCLYESATSIHGRTQAMVGRTFDNVFTHFQPV 435
+T + RL+ N QP + +TD GF K++ P ++ + + E N+ +E W + +++N++ES T +VA++ +++E ++ K +E+W E + PTS YGIR Y G++L HVD + S I+N+ QDVD+ WPL++ D +G + M GDM LYES +++HGR + GR + N+F HF+P+
Sbjct: 68 QTEMDRLEMNARQPKAMVNYTDTGFTKIKAPQKVMDLIIQHWEANKETMTEESWPKGSIYLNYWESKTYMVAVEDRNLKGAGDKLKEQIWDAAKTTIEAWTNVE-IQPTSMYGIRVYTEGAILSPHVD-RLPLVSSCIINVAQDVDEPWPLEVYDRQGNAVNVTMEPGDMVLYESGSTLHGRPFPLKGRYYANIFIHFEPL 266 The following BLAST results are available for this feature:
BLAST of NO02G01180 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO02G01180 ID=NO02G01180|Name=NO02G01180|organism=Nannochloropsis oceanica|type=gene|length=2551bpback to top protein sequence of NO02G01180.1 >NO02G01180.1-protein ID=NO02G01180.1-protein|Name=NO02G01180.1|organism=Nannochloropsis oceanica|type=polypeptide|length=523bpback to top Synonyms
Publications
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