NO02G01180, NO02G01180 (gene) Nannochloropsis oceanica

Overview
NameNO02G01180
Unique NameNO02G01180
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2551
Alignment locationchr2:365047..367597 -

Link to JBrowse

Properties
Property NameValue
DescriptionProlyl 4-hydroxylase
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr2genomechr2:365047..367597 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR036208VHL_sf
IPR024053VHL_beta_dom
Vocabulary: Biological Process
TermDefinition
GO:0008152metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
Homology
BLAST of NO02G01180 vs. NCBI_GenBank
Match: XP_005855109.1 (prolyl 4-hydroxylase, partial [Nannochloropsis gaditana CCMP526] >EKU21252.1 prolyl 4-hydroxylase, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 564.3 bits (1453), Expect = 3.900e-157
Identity = 259/431 (60.09%), Postives = 332/431 (77.03%), Query Frame = 0
Query:   12 LAVLPTLAQAIHYFTGLDSLAGLEIVGITDSNGMVVKNTLVSFSNKQCIQDLYDLDFPFNFINLPSTTHELANVLVETPSNELMDFFDIHDCKSFIYFTAGDSLQAKGTKLTPTSGHELDDFFWEKQRLPNVKIRNDLEKPVNVYWESWDGQPREVSIMELVPGQEQSFGSFLSHTLIFRDVENNMRLMARAVITDGSKPIVISDLLAGPADTEVLQLTDHQVKVWRGRLRTNISRLKQNEAQPPNVRTFTDVGFRKLRIPANLLRHLQEFLEQNEGKRVDEGWNEDDLHVNFYESMTTVVALDHEMRELVFGTIKPILESWIGGEKLDPTSTYGIRRYYNGSVLRDHVDIGATHIVSAILNLGQDVDKVWPLQILDHEGRRHFIEMVAGDMCLYESATSIHGRTQAMVGRTFDNVFTHFQPVKPFDVVAA 443
            +A+ P  A A++YFTGLDS   ++ +GITD  G++ KNTL SFSN +C+ DL+D+ FPF F++LP  THELAN+LVETP NELM FF++ DCKSF  FTAGDS+  KG K+ P+    L+D FW  QRLPN++IRNDL++ V+V+WE  DG   E  ++ L  GQE+ F SFL    IFRD  ++MRL+AR VITDG+KP+++S  L G  DTE LQL ++Q  VWRGR  TN++RL+QNE QP  V+ +T  GF+K+ +P+ L   L E+L ++E +R+DE W++DDLHVNFYE MTT+V  D +MR++VF T+KPILESW+GGEKL PTSTYGIRRYYNGS+LRDHVDIG THIVSAILN+ QDVD+VWPL ILDH+GRRHFI+M  G+MCLYESAT++HGRTQA+ GR FDN+F HF P  PF V A+
Sbjct:   30 VALGPYPAAAVNYFTGLDSFVAMKALGITDGAGVLQKNTLFSFSNNECVHDLHDIGFPFIFMDLPGATHELANILVETPPNELMSFFNVSDCKSFYSFTAGDSIHDKGNKIVPSDQASLEDAFWHDQRLPNLRIRNDLQRVVDVFWELRDGSLTEFRVVRLNSGQEERFRSFLGDIFIFRDAYDDMRLLARTVITDGNKPLILSQTLMGKGDTETLQLNENQADVWRGRQNTNVARLRQNELQPSTVKKYTGGGFKKMLMPSYLHTRLLEYLARHEDQRMDEPWHKDDLHVNFYEKMTTIVYTDRDMRDIVFKTLKPILESWVGGEKLMPTSTYGIRRYYNGSILRDHVDIGRTHIVSAILNVRQDVDEVWPLSILDHQGRRHFIDMAPGEMCLYESATALHGRTQALRGRYFDNLFAHFAPAAPFTVNAS 460          
BLAST of NO02G01180 vs. NCBI_GenBank
Match: EWM30492.1 (hypothetical protein Naga_100013g87 [Nannochloropsis gaditana])

HSP 1 Score: 563.5 bits (1451), Expect = 6.700e-157
Identity = 259/431 (60.09%), Postives = 331/431 (76.80%), Query Frame = 0
Query:   12 LAVLPTLAQAIHYFTGLDSLAGLEIVGITDSNGMVVKNTLVSFSNKQCIQDLYDLDFPFNFINLPSTTHELANVLVETPSNELMDFFDIHDCKSFIYFTAGDSLQAKGTKLTPTSGHELDDFFWEKQRLPNVKIRNDLEKPVNVYWESWDGQPREVSIMELVPGQEQSFGSFLSHTLIFRDVENNMRLMARAVITDGSKPIVISDLLAGPADTEVLQLTDHQVKVWRGRLRTNISRLKQNEAQPPNVRTFTDVGFRKLRIPANLLRHLQEFLEQNEGKRVDEGWNEDDLHVNFYESMTTVVALDHEMRELVFGTIKPILESWIGGEKLDPTSTYGIRRYYNGSVLRDHVDIGATHIVSAILNLGQDVDKVWPLQILDHEGRRHFIEMVAGDMCLYESATSIHGRTQAMVGRTFDNVFTHFQPVKPFDVVAA 443
            +A+ P  A A++YFTGLDS   ++ +GITD  G++ KNTL SFSN +C+ DL+D+ FPF F++LP  THELAN+LVETP NELM FF++ DCKSF  FTAGDS+  KG K+ P+    L+D FW  QRLPN++IRNDL++ V+V+WE  DG   E  ++ L  GQE+ F SFL    IFRD  ++MRL+AR VITDG+KP+++S  L G  DTE LQL ++Q  VWRGR  TN++RL+QNE QP  V+ +T  GF+K+ +P+ L   L E+L ++E +R+DE W++DDLHVNFYE MTT+V  D +MR++VF T+KPILESW+GGEKL PTSTYGIRRYYNGS+LRDHVDIG THIVSAILN+ QDVD+VWPL ILDH+GRRHFI M  G+MCLYESAT++HGRTQA+ GR FDN+F HF P  PF V A+
Sbjct:   40 VALGPYPAAAVNYFTGLDSFVAMKALGITDGAGVLQKNTLFSFSNSECVHDLHDIGFPFIFMDLPGATHELANILVETPPNELMSFFNVSDCKSFYSFTAGDSIHDKGNKIVPSDQASLEDAFWHDQRLPNLRIRNDLQRVVDVFWELRDGSLTEFRVVRLNSGQEERFRSFLGDIFIFRDAYDDMRLLARTVITDGNKPLILSQTLMGKGDTETLQLNENQADVWRGRQNTNVARLRQNELQPSTVKKYTGGGFKKMLMPSYLHTRLLEYLARHEDQRMDEPWHKDDLHVNFYEKMTTIVYTDRDMRDIVFKTLKPILESWVGGEKLMPTSTYGIRRYYNGSILRDHVDIGRTHIVSAILNVRQDVDEVWPLSILDHQGRRHFINMAPGEMCLYESATALHGRTQALRGRYFDNLFAHFAPAAPFTVNAS 470          
BLAST of NO02G01180 vs. NCBI_GenBank
Match: EWM21003.1 (hypothetical protein Naga_100081g21 [Nannochloropsis gaditana])

HSP 1 Score: 237.7 bits (605), Expect = 8.400e-59
Identity = 139/452 (30.75%), Postives = 224/452 (49.56%), Query Frame = 0
Query:   12 LAVLPTLAQAIHYFTGLDSLAGLEIVGITDSN-GMVVKNTLVSFSNKQCIQDLYDLDFPFNFINLPSTTHELANVLVETPSNELMDFFDIHDCKSFIYFTAGDSLQAKGTKLTPTSGHELDDFFWEKQRLPNVKIRNDLEKPVNVYWESWDGQPREVSIMELVPGQEQSFGSFLSHTLIF--RDVENNMRLMARAVITDGSKPIVISDLLAGPAD--------------------------TEVLQLTDHQVKVWRGRLRTNISRLKQNEAQPPNVRTFTDVGFRKLRIPANLLRHLQEFLEQNEGKRVDEGWNEDDLHVNFYESMTTVVALDHEMRELVFGTIKPILESWIGGEKLDPTSTYGIRRYYNGSVLRDHVDIGATHIVSAILNLGQDVDKVWPLQILDHEGRRHFIEMVAGDMCLYESATSIHGRTQAMVGRTFDNVFTHFQPV 435
            + +LP   QA+++F  L+ L  LE++G+   + G+  K+ L+ FS+  C Q +  L FP  +  L     E   V+++  + EL   ++I  C  ++Y   G   +     +      +L ++ +    L  +++ NDL   V++ WE          ++ +  G+  S  +F +H L F      +  R   R  +   +  + +SD L   A+                          T+ +QL +  + +WRGR   N  R+ +NE QP     +T +GF+K RIP  + + L      + G+ + E W + D H NF+E+ +T+V L    +  +F  + P L  W GG KL PTS YGIR Y+NGS LR+HVD G THI+SAI+N+ QDV++ W L  +DH   RHF+ +  GD   YESA+ +HGR   + G+ F N F HF+ V
Sbjct:   12 MLLLPLALQAVNHFKDLNRLEDLELLGLVQKDTGVAEKHLLLGFSSSACEQSVRGLGFPSEYSVLGEHV-ETGEVMLDR-NTELPGVYNISSCNEYVYVPRGGRTREDYDVIKAVDKLQLHNWLFTHLAL-TMEVINDLPFDVSIKWEDTGRSQAPQDLISIPRGRTSSINTFETHHLRFVSHQPGSEPRQFLRVRVDGSTNTLRLSDFLTEEANQQCLNPQDCGAKTVTTLPNVNNQHGSTDDVQLVEEDMNIWRGRDVENKGRVVRNEVQPKTKPRYTALGFKKTRIPDAVYQVLLN--RYHSGEHILEPWPKSDCHTNFFEAPSTMVYLSDAEKADIFSGMMPNLSKWAGGVKLHPTSCYGIRIYHNGSWLREHVDTGDTHIISAIMNVDQDVEEDWLLTFIDHNDNRHFVTLEPGDALYYESASGLHGRPIPLKGKLFANAFVHFKVV 458          
BLAST of NO02G01180 vs. NCBI_GenBank
Match: CBN77694.1 (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 156.4 bits (394), Expect = 2.500e-34
Identity = 92/301 (30.56%), Postives = 147/301 (48.84%), Query Frame = 0
Query:  137 KQRLPNVKIRNDLEKPVNVYWESWDGQPREVSIMELVPGQEQSFGSFLSHTLIFRDVENNMRLMARAVITDGSKPIVISDLLAGPADTEVLQLTDHQVKVWRGRLRTNISRLKQNEAQPPNVRTFTDVGFRKLRIPANLLRHLQEFLEQNEGKRVDEGWNEDDLHVNFYESMTTVVALDH-EMRELVFGTIKPILESWIGGEKLDPTSTYGIRRYYNGSVLRDHVDIGATHIVSAILNLGQDVDKVWPLQILDHEGRRHFIEMVAGDMCLYESATSIHGRTQAMVGRTFDNVFTHFQPVKP 437
            K +  +V I N++   ++++++ WD   +   I  L PG E    S+ +  ++  + E    +    V   G   +      A    T     T   +     R + +  RL  N  QP  +  FT+VGF+K+ +P ++   ++ + E+N+ +    G         +    T     ++ +++E +FG ++PILE W G E L  T+ YG+R Y N S L +HVD  ATH VS I+ + QDV++ WPL I DH G  + I M   D+ LYESAT +HGR     G  + N F HF+P  P
Sbjct:  159 KTQQVSVGIVNEMGFDLDIHYQWWDEPVKPTHIRTLTPGTENWMLSYKTTLVLALNKETQEEVSRFVVKGHGLFTVAERSCTAETCGTSEGAETPQDIASRNARRQMDQGRLVNNRKQPEGLPRFTEVGFKKITVPDDVWDLVKTYYEENKRR---SGLRTTSSPTTWRRRATWSTCRENGKLKEQIFGGLRPILEEWSGVE-LVQTACYGVRVYTNTSWLANHVDTKATHAVSVIMQVDQDVEEDWPLMIYDHAGNDYNITMKPRDLVLYESATCVHGRPSTFHGNYYANAFVHFKPKDP 455          
BLAST of NO02G01180 vs. NCBI_GenBank
Match: XP_009032975.1 (hypothetical protein AURANDRAFT_70663 [Aureococcus anophagefferens] >EGB11853.1 hypothetical protein AURANDRAFT_70663 [Aureococcus anophagefferens])

HSP 1 Score: 152.1 bits (383), Expect = 4.600e-33
Identity = 78/209 (37.32%), Postives = 120/209 (57.42%), Query Frame = 0
Query:  239 GRLRTN-ISRLKQNEAQPPNVRTFTDVGFRKLRIPANLLRHLQEFLEQNEGKRVDEGWNEDDLHVNFYESMTTVVALDH--------EMRELVFGTIKPILESWIGGEKLDPTSTYGIRRYYNGSVLRDHVDIGATHIVSAILNLGQDVDKVWPLQILDHEGRRHFIEMVAGDMCLYESATSIHGRTQAMVGRTFDNVFTHFQPVKPFD 439
            G  R+N  SR+  N  Q P  R FT++GF K+R P N+    + F + ++     E W   + +VN +++ + +V+L+           ++ ++   KPILE+W  G+ L PTS YGIR+Y+ G +L  HVD     + S I+N+ QDVD+ WP++++ H+G  + + +  GDM LYES T +HGR   + G  F NVF HF PV P D
Sbjct: 1423 GSCRSNEESRMAMNRDQIPRQRNFTELGFAKIRAPENVYGPARAFWDLHKDSGTSEAWPAGNTYVNHWKADSHMVSLEDRRWQPLGLRTKDKIWAGAKPILEAWT-GQTLKPTSLYGIRKYFRGGILATHVD-RLPLVTSCIINVDQDVDEPWPIEVVGHDGVAYNVTLEPGDMALYESHTVLHGRPFPLKGNFFANVFVHFIPVDPND 1629          
BLAST of NO02G01180 vs. NCBI_GenBank
Match: OEU17997.1 (hypothetical protein FRACYDRAFT_238428 [Fragilariopsis cylindrus CCMP1102])

HSP 1 Score: 150.2 bits (378), Expect = 1.800e-32
Identity = 82/207 (39.61%), Postives = 118/207 (57.00%), Query Frame = 0
Query:  245 ISRLKQNEAQPPNVRTFTDVGFRKLRIPANLLRHLQEFLEQNEGKRVDEGWNEDDLHVNFYESMTTVVALDHEMRELVFGTIKPI--------LESWIGG-EKLDPTSTYGIRRYYNGSVLRDHVDIGATHIVSAILNLGQDVDKVWPLQILDHEGRRHFIEMVAGDMCLYESATSIHGRTQAMVGRTFDNVFTHFQPVKPFDVVAA 443
            ++RL+ N+ QP ++   T  G+ K   PA+L++ L +F EQN+ ++  E W E  ++ N ++S T +V +  E  E    T+K          +E W GG  KL P S YGIR Y  G+VL  HVD     + S I+N+ QDVD+ WPL++ D  G    I M  GDM LYES + IHGR   + GR + NVF HF+P + +D+ AA
Sbjct:  105 LTRLEMNQRQPQSMVNMTTTGYMKTTAPASLMKLLTKFWEQNKEEKEMEEWGEGSIYTNHWKSPTHMVNVGDEYLEGGGKTLKKAIWDAAVTGMEEWTGGVAKLRPVSLYGIREYTEGAVLSPHVD-RVPLVSSGIVNVAQDVDEDWPLEVYDRNGHAVNITMKPGDMILYESHSLIHGRPFPLKGRYYANVFIHFEPFEGWDINAA 310          
BLAST of NO02G01180 vs. NCBI_GenBank
Match: OEU20670.1 (hypothetical protein FRACYDRAFT_180822 [Fragilariopsis cylindrus CCMP1102])

HSP 1 Score: 149.1 bits (375), Expect = 3.900e-32
Identity = 83/216 (38.43%), Postives = 120/216 (55.56%), Query Frame = 0
Query:  246 SRLKQNEAQPPNVRTFTDVGFRKLRIPANLLRHLQEFLEQNEGKRVDEGWNEDDLHVNFYESMTTVVAL--DHEMRELVFGTIKPILESWIGGEKLDPTSTYGIRRYYNGSVLRDHVDIGATHIVSAILNLGQDVDKVWPLQILDHEGRRHFIEMVAGDMCLYESATSIHGRTQAMVGRTFDNVFTHFQPVKPFDVVAAEGVHAVVHPMLTEEQEW 460
            SRLK N  QP +V  +T  G+ K R+P++L   ++EF  +N      E W    ++ N + +  T+V L  D  +   +   IKPILE W  G+ L P STYGIR Y+NGS+L  HVD     + S I+ + QDVD+ WPL++  H+ +   I M  GDM LYES + IHGR   M+G  F N F HF+P  P +   A   ++ + P + ++  W
Sbjct:   95 SRLKMNANQPKSVFNYTKDGYTKTRVPSDLFDLIKEFFNKNRHLAKIE-WQSHTVYHNAWIAPPTMVGLNKDKTLINQIQEQIKPILEEWT-GQHLSPVSTYGIRMYHNGSILAPHVD-RMPLVASVIIQVDQDVDEPWPLEVYGHDDKATNITMEPGDMVLYESHSVIHGRPFPMIGNFFANCFIHFEPYAPLE-GEAHDPNSDIPPYIVKDSVW 306          
BLAST of NO02G01180 vs. NCBI_GenBank
Match: XP_009033934.1 (hypothetical protein AURANDRAFT_70898 [Aureococcus anophagefferens] >EGB11582.1 hypothetical protein AURANDRAFT_70898 [Aureococcus anophagefferens])

HSP 1 Score: 148.7 bits (374), Expect = 5.100e-32
Identity = 83/185 (44.86%), Postives = 102/185 (55.14%), Query Frame = 0
Query:  251 NEAQPPNVRTFTDVGFRKLRIPANLLRHLQEFLEQNEGKRVDEGWNEDDLHVNFYESMTTVVALDHEMRELVFGTIKPILESWIGGE--KLDPTSTYGIRRYYNGSVLRDHVDIGATHIVSAILNLGQDVDKVWPLQILDHEGRRHFIEMVAGDMCLYESATSIHGRTQAMVGRTFDNVFTHFQP 434
            N  QPP V  FTDVGF    IP                          D+H         + A D ++R  V    + ILE+WIG +   L PTS YGIRRY NGS L+ HVD+ ATH VSAILN+ QDVD+ WPLQI DH G  H + M  G+M LYES+ SIHGR   + G ++DN+F HF+P
Sbjct: 1680 NRDQPPTVPAFTDVGFAVRPIPR-------------------------DVHA------ALLAARDDKVRTQVNDACRAILEAWIGPKWGGLVPTSVYGIRRYTNGSTLQAHVDVVATHAVSAILNVDQDVDEDWPLQIRDHGGDVHAVVMKPGEMVLYESSKSIHGRLVPLNGASYDNIFVHFRP 1833          
BLAST of NO02G01180 vs. NCBI_GenBank
Match: OEU09367.1 (hypothetical protein FRACYDRAFT_277285 [Fragilariopsis cylindrus CCMP1102])

HSP 1 Score: 147.1 bits (370), Expect = 1.500e-31
Identity = 70/202 (34.65%), Postives = 119/202 (58.91%), Query Frame = 0
Query:  241 LRTNISRLKQNEAQPPNVRTFTDVGFRKLRIPANLLRHLQEFLEQNEGKRVDEGWNEDDLHVNFYESMTTVVALDHE--------MRELVFGTIKPILESWIGGEKLDPTSTYGIRRYYNGSVLRDHVDIGATHIVSAILNLGQDVDKVWPLQILDHEGRRHFIEMVAGDMCLYESATSIHGRTQAMVGRTFDNVFTHFQPV 435
            ++  + R+   + QP +++ +T VG++K+R P  +   +Q F E+N+    DE W   + + N +E+ + +V+++          +++ ++   K  +  W  G++L   S YG+R YY GSVL  HVD     + SAI+N+ QDVD+ WPL+++ H+GR   + M+ GDM LYES + IHGR   + GR F N+F HF+P+
Sbjct:  105 VQNELDRIAMTKRQPQSMQNYTKVGYKKIRAPKAVWDLVQAFWEKNKAYPKDENWGIGNTYTNNWETHSKMVSVEDSGLRGGGSGLKQKIWDAAKETISDW-NGQELTQCSLYGVRVYYEGSVLAPHVD-RLPLVSSAIINVAQDVDEPWPLEVIGHDGRAENVTMMPGDMVLYESHSVIHGRPFPLKGRFFANLFVHFEPI 304          
BLAST of NO02G01180 vs. NCBI_GenBank
Match: GAX21456.1 (hypothetical protein FisN_10Hh035 [Fistulifera solaris])

HSP 1 Score: 146.7 bits (369), Expect = 2.000e-31
Identity = 70/201 (34.83%), Postives = 118/201 (58.71%), Query Frame = 0
Query:  242 RTNISRLKQNEAQPPNVRTFTDVGFRKLRIPANLLRHLQEFLEQNEGKRVDEGWNEDDLHVNFYESMTTVVALD--------HEMRELVFGTIKPILESWIGGEKLDPTSTYGIRRYYNGSVLRDHVDIGATHIVSAILNLGQDVDKVWPLQILDHEGRRHFIEMVAGDMCLYESATSIHGRTQAMVGRTFDNVFTHFQPV 435
            +T + RL+ N  QP  +  +TD GF K++ P  ++  + +  E N+    +E W +  +++N++ES T +VA++         +++E ++   K  +E+W   E + PTS YGIR Y  G++L  HVD     + S I+N+ QDVD+ WPL++ D +G    + M  GDM LYES +++HGR   + GR + N+F HF+P+
Sbjct:   68 QTEMDRLEMNARQPKAMVNYTDTGFTKIKAPQKVMDLIIQHWEANKETMTEESWPKGSIYLNYWESKTYMVAVEDRNLKGAGDKLKEQIWDAAKTTIEAWTNVE-IQPTSMYGIRVYTEGAILSPHVD-RLPLVSSCIINVAQDVDEPWPLEVYDRQGNAVNVTMEPGDMVLYESGSTLHGRPFPLKGRYYANIFIHFEPL 266          
The following BLAST results are available for this feature:
BLAST of NO02G01180 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
XP_005855109.13.900e-15760.09prolyl 4-hydroxylase, partial [Nannochloropsis gad... [more]
EWM30492.16.700e-15760.09hypothetical protein Naga_100013g87 [Nannochlorops... [more]
EWM21003.18.400e-5930.75hypothetical protein Naga_100081g21 [Nannochlorops... [more]
CBN77694.12.500e-3430.56conserved unknown protein [Ectocarpus siliculosus][more]
XP_009032975.14.600e-3337.32hypothetical protein AURANDRAFT_70663 [Aureococcus... [more]
OEU17997.11.800e-3239.61hypothetical protein FRACYDRAFT_238428 [Fragilario... [more]
OEU20670.13.900e-3238.43hypothetical protein FRACYDRAFT_180822 [Fragilario... [more]
XP_009033934.15.100e-3244.86hypothetical protein AURANDRAFT_70898 [Aureococcus... [more]
OEU09367.11.500e-3134.65hypothetical protein FRACYDRAFT_277285 [Fragilario... [more]
GAX21456.12.000e-3134.83hypothetical protein FisN_10Hh035 [Fistulifera sol... [more]

Pages

back to top
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL016nonsL016Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR033ncniR033Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR032ncniR032Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR000ngnoR000Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK006731NSK006731Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO02G01180.1NO02G01180.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|573834gene_700Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100013g87gene130Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO02G01180.1NO02G01180.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO02G01180 ID=NO02G01180|Name=NO02G01180|organism=Nannochloropsis oceanica|type=gene|length=2551bp
GAGAAAATGGACGATTATATTTCATTTAAATGAGTCTGCTGGGAGTTAGT
AGTTATACACCCAGTAGGGTATTTACCGACCACAAGCCATCTATAGACAA
GGAGGGTTAGGAGGTTGGTCTGCATGATAGTGACTGAACTATTTTTCCCT
CTCCAACCATTCACGGCATCTTCCGCCAGGCATGTTGATGAATAAAAGTT
CCTGGAAAGAGGCTAAGTCATGACCAATTGTAGTCTAACAGAAGAAGAAA
TGACATTCGTTTCGGGCCGTTGTTTCCGAAGGTTTTGAACCTGGCGAGCG
CACAATGCGCCGCGCTTGTGGCCTAACGCTGCGCCTATACATTAGGGTGT
AGGGTATAGGGTAGGGTTGGTAGGGTAGTACCCTCGGGCGCTAGTGCAGG
CACTTGGTGGGGTCTGCATGAATGCTGCCGCGGCAGTGTGCAAAAGAAGC
AATGCAGCACAGCAGCATTTAAAACATATGGTCCATACTCGAAGCTCCGA
GTCATACGACCTTTTCAGGACTCACACAGACGCATCTAACACGGGCGGTG
ACACATCCACGCTATTCCTTCCCCTCGCTGTCGGTATACGGCTACTAATT
TGTCGGCCGCGTCGGCCATCTCCGGCGTCTAACCCATACACTACTAAAAC
ACACAGGTGCACGGTGCACAAATAGAGCAAGTAAGTGCAGGAAAGCGTGC
CTGATTGCAGGAGAAAGTTTTTTTTTCGTGTGACACACACAGACAACATG
AGTCGTGGCCGCGTCTTTTTTGCTTTGGGCCTTGCAGTCCTACCCACCCT
GGCGCAAGCCATCCATTACTTCACGGGCTTAGATTCCCTGGCCGGCCTCG
AGATTGTAGGGATAACGGATTCAAATGGCATGGTGGTGAAAAACACATTG
GTTTCGTTTTCGAACAAGCAGTGCATCCAAGACCTGTACGACTTGGATTT
TCCCTTCAACTTTATTAACTTGCCAAGCACAACGCACGAGCTCGCTAACG
TCCTTGTGGAGACTCCCAGCAATGAATTGATGGACTTTTTCGACATTCAT
GATTGCAAGTCTTTCATTTACTTCACCGCGGGTGATTCCTTGCAAGCAAA
AGGCACGAAGCTTACACCCACAAGTGGACATGAATTGGACGATTTCTTTT
GGGAGAAGCAGCGTTTACCCAATGTCAAAATTCGAAACGACTTGGAGAAA
CCTGTCAATGTTTATTGGGAGTCGTGGGATGGACAGCCAAGGGAGGTAAG
CATCATGGAGCTCGTCCCCGGGCAAGAACAGAGCTTTGGCTCCTTCTTAA
GCCATACACTGATTTTTCGGGATGTGGAGAACAATATGCGTTTGATGGCC
CGTGCGGTGATTACGGACGGTAGCAAGCCAATCGTCATCTCCGATCTCTT
GGCGGGGCCAGCAGACACAGAGGTGTTGCAGCTGACAGACCATCAAGTGA
AGGTGTGGAGAGGCCGTCTCAGGACCAATATATCTCGCCTCAAGCAAAAT
GAAGCACAGCCCCCTAATGTGCGGACGTTTACAGACGTGGGTTTTAGAAA
GCTGCGTATTCCCGCCAACTTGCTCCGGCACCTTCAAGAGTTCCTTGAGC
AGAACGAAGGCAAGCGCGTGGACGAAGGCTGGAATGAGGATGATCTGCAC
GTAAACTTCTACGAGAGCATGACAACGGTTGTCGCACTTGATCACGAAAT
GCGCGAGCTCGTGTTTGGCACCATTAAACCTATTTTGGAGTCGTGGATAG
GCGGAGAGAAGCTGGATCCCACCAGCACGTACGGCATCCGCCGCTACTAC
AACGGGAGCGTCTTGCGCGATCACGTCGACATTGGCGCCACACACATCGT
CTCGGCTATCCTGAATCTCGGGCAGGACGTGGATAAAGTCTGGCCCTTGC
AAATTCTCGATCACGAGGGGAGACGGCACTTTATTGAGATGGTGGCCGGA
GACATGTGCTTGTATGAATCTGCGACCTCTATCCACGGCAGGACTCAAGC
GATGGTGGGGAGGACGTTTGACAATGTATTCACTCACTTTCAGCCAGTAA
AGCCCTTTGATGTTGTGGCTGCTGAGGGGGTGCATGCGGTCGTGCACCCA
ATGCTGACGGAGGAACAGGAGTGGTTGGAGGCGGAGGGAGAGCTGGAAGA
AGAGGGTGAGGAAGAGGGGGGAATCGAGAACGTGGAGGGGAAAGGGTTGG
AGTTCGAGGAGGGTGAAATCGGAGATAGGCTGGTCGATGACAAGATGGGG
AGGGGTCAGCAGCATAAGCCGGTTGATAACTTTGAGGAAGGAACGGGGCT
GATGGAGGAAATGTGAGGGAAAAGGAGGGGGCAAAAGGGACGCTAGTAGA
GAGGATGGAGAAGGCTGTGCTGCGCTGAAATGGTGAATATGGATAAATTG
GATGTGCTGTAAGTACCTTACAAGAAACCGAATTCATTTCCCTTCCTTCC
AGCCAGATGTATGCTTGTGCTCCCCATGTGCATATATTCGATAGCCACAG
ATACACAACAGTAAAATGAAAGAATAGCACTCGATGGCATCAAGCGCCCC
T
back to top

protein sequence of NO02G01180.1

>NO02G01180.1-protein ID=NO02G01180.1-protein|Name=NO02G01180.1|organism=Nannochloropsis oceanica|type=polypeptide|length=523bp
MSRGRVFFALGLAVLPTLAQAIHYFTGLDSLAGLEIVGITDSNGMVVKNT
LVSFSNKQCIQDLYDLDFPFNFINLPSTTHELANVLVETPSNELMDFFDI
HDCKSFIYFTAGDSLQAKGTKLTPTSGHELDDFFWEKQRLPNVKIRNDLE
KPVNVYWESWDGQPREVSIMELVPGQEQSFGSFLSHTLIFRDVENNMRLM
ARAVITDGSKPIVISDLLAGPADTEVLQLTDHQVKVWRGRLRTNISRLKQ
NEAQPPNVRTFTDVGFRKLRIPANLLRHLQEFLEQNEGKRVDEGWNEDDL
HVNFYESMTTVVALDHEMRELVFGTIKPILESWIGGEKLDPTSTYGIRRY
YNGSVLRDHVDIGATHIVSAILNLGQDVDKVWPLQILDHEGRRHFIEMVA
GDMCLYESATSIHGRTQAMVGRTFDNVFTHFQPVKPFDVVAAEGVHAVVH
PMLTEEQEWLEAEGELEEEGEEEGGIENVEGKGLEFEEGEIGDRLVDDKM
GRGQQHKPVDNFEEGTGLMEEM*
back to top
Synonyms
Publications