NO02G01100, NO02G01100 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO02G01100 vs. NCBI_GenBank
Match: EWM30489.1 (rrna maturation factor [Nannochloropsis gaditana]) HSP 1 Score: 296.2 bits (757), Expect = 1.900e-76 Identity = 141/193 (73.06%), Postives = 168/193 (87.05%), Query Frame = 0 Query: 246 LGTIQIRNSQRSISLDIDVLHNHIRGIMEIIGKDDHDVSLWLTNDRSIREYNDRYRGKRSATDILSFPFHEYKSPGVPTPESVALNGQIKDLGDMMVSTGYVQRQCARDEADWAAEGENQWSEERGASGAMARVYDVQGRLPFLVIHGLLHLLGYDHETEKEYEEMVREEERVISEFARRF-----PEAAPPM 434 LGTIQIRNSQR+I+LD+D+LH +R I+EI+GK DHDVSLWLTNDRSIREYNDRYRGKR+ATDILSFPFHEY++PG+PT ES AL G++KDLGDM+VS YVQRQC RD+ADW +GEN WS ERGASGAMARV+ VQ RLPFLVIHG+LHLLG+DHET+K+Y EMV+EE+RV++EF ++F EAAP M Sbjct: 210 LGTIQIRNSQRTIALDLDLLHAQVRTILEIVGKSDHDVSLWLTNDRSIREYNDRYRGKRTATDILSFPFHEYEAPGIPTSESWALTGEVKDLGDMIVSVPYVQRQCQRDQADWLEKGENLWSGERGASGAMARVFGVQDRLPFLVIHGVLHLLGFDHETDKDYNEMVKEEDRVLAEFKKKFASTGLSEAAPEM 402
BLAST of NO02G01100 vs. NCBI_GenBank
Match: XP_009032744.1 (hypothetical protein AURANDRAFT_18863 [Aureococcus anophagefferens] >EGB13148.1 hypothetical protein AURANDRAFT_18863 [Aureococcus anophagefferens]) HSP 1 Score: 149.8 bits (377), Expect = 2.200e-32 Identity = 77/178 (43.26%), Postives = 117/178 (65.73%), Query Frame = 0 Query: 246 LGTIQIRNSQRSISLDIDVLHNHIRGIMEIIGKDDHDVSLWLTNDRSIREYNDRYRGKRSATDILSFPFHEYKSPGVPTPESVALNGQIK-DLGDMMVSTGYVQRQCARDEADWAAEGENQWSEERGASGAMARVYDVQGRLPFLVIHGLLHLLGYDHETEKEYEEMVREEERVISEF 423 +GT+ IRN+QRSI +D+D + + R ++E + + DV +WLT D +IR+YN R+RG R +TDILSFPFH+ +PG P++V + + +LGDM+VS YV+R+ +D G + RG + AMA V DV+ R+ L++HGL HLL YDHET+ E+E+MV E+ ++ + Sbjct: 36 VGTVLIRNTQRSIPIDVDAVESVTRALLERLRCSEFDVGIWLTTDATIRKYNTRFRGMRKSTDILSFPFHDELAPGA-LPDAVDRDDEDDLNLGDMVVSVPYVRRRAEKD-------GGRDHAPGRGVAAAMAPVADVEERIHMLLVHGLCHLLNYDHETDDEFEDMVALEDELLETY 205
BLAST of NO02G01100 vs. NCBI_GenBank
Match: XP_002176621.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC51084.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 130.6 bits (327), Expect = 1.400e-26 Identity = 71/173 (41.04%), Postives = 109/173 (63.01%), Query Frame = 0 Query: 247 GTIQIRNSQRSISLDIDVLHNHIRGIMEIIGKDDHDVSLWLTNDRSIREYNDRYRGKRSATDILSFPFHEYKSPGVPTPESVALNGQIKDLGDMMVSTGYVQRQCARDEADWAAEGENQWSEERGASGAMARVYDVQGRLPFLVIHGLLHLLGYDHETEKEYEEMVREEERVI 420 G I + N+Q S+++D++ L I I +++G +DVSL L +D+ +RE N+ RG TD+LSFPF E PGV TP V + G ++GDMM+ YV R C +D+A ++ + E+RG S AMA V D + R+ L++HG+LHL+GYDH + +Y+ MV +EE ++ Sbjct: 16 GDIYVENNQESLNIDLERLKATIAKIRDLMGYRTYDVSLLLVDDQEMRETNEETRGMDEPTDVLSFPFTEAIEPGVLTPPVVDI-GDYYNMGDMMIDVPYVIRAC-QDDAKYS--HSDLEDEDRGVSAAMAMVMDPEERINMLLVHGMLHLVGYDHIDDDDYQLMVAKEEEIL 184
BLAST of NO02G01100 vs. NCBI_GenBank
Match: CBJ32782.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 130.2 bits (326), Expect = 1.800e-26 Identity = 77/185 (41.62%), Postives = 102/185 (55.14%), Query Frame = 0 Query: 247 GTIQIRNSQRSISLDIDVLHNHIRGIMEIIGKDDHDVSLWLTNDRSIREYNDRYRGKRSATDILSFPFHEYK-SPGVPTPESVALNGQIKDLGDMMVSTGYVQRQCARDE-----------ADWAAEGENQWSEERGASGAMARVYDVQGRLPFLVIHGLLHLLGYDHETEKEYEEMVREEERVI 420 GT ++N Q+ +D L + +R ME++G DV LT D+ + N +YRG ++TDILSFP H+ SPGV V ++ DLGDM +S YV RQ RD ERG SGAM+RV+DVQ R L++HGL+HLLGYDHETE +Y+ MV EE V+ Sbjct: 104 GTASVQNEQKEYEIDTAELQSKMRQTMEVLGCQAWDVGAVLTTDKEVFRLNRQYRGMSTSTDILSFPNHDMSGSPGV--LPKVRFPAEM-DLGDMFISLAYVDRQIKRDRXXXXXXXXXXXXXXXXXXXXXXXSERGVSGAMSRVFDVQERASMLLVHGLIHLLGYDHETESDYKAMVAVEEEVL 285
BLAST of NO02G01100 vs. NCBI_GenBank
Match: CEM03215.1 (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 129.4 bits (324), Expect = 3.100e-26 Identity = 73/180 (40.56%), Postives = 110/180 (61.11%), Query Frame = 0 Query: 247 GTIQIRNSQRSISLDIDVLHNHIRGIMEIIGKDDHDVSLWLTNDRSIREYNDRYRGKRSATDILSFPFHEYKSPGVPTPESVALNGQIKDLGDMMVSTGYVQRQCARDEADWAAEGENQW---SEERGASGAMARVYDVQGRLPFLVIHGLLHLLGYDHETEKEYEEMVREEERVISEFA 424 G I + NSQR I+LD+ +L I+ I +IIG D+ + L +++ ++ N +R K TDILSF + PG P+ + + DLGD+ +S YVQ +C D A+ A+ E+ S ERG SGAMA+ + V+ RLP LVIHG+LHLLGYD +++ ++ MV EE+VI +++ Sbjct: 145 GEITLTNSQREIALDMGLLERQIKHIRDIIGVSAFDIGVELVDNQRMQHLNRDFRAKDRPTDILSFRCFDDIEPG-SLPK--VTSAEDLDLGDIFISAEYVQERCDEDRAEMEAQLEDNGEFVSTERGVSGAMAKTFTVRERLPLLVIHGILHLLGYDDQSDSDWSMMVNREEQVIKQYS 321
BLAST of NO02G01100 vs. NCBI_GenBank
Match: GAX12510.1 (hypothetical protein FisN_24Hh086 [Fistulifera solaris]) HSP 1 Score: 116.7 bits (291), Expect = 2.100e-22 Identity = 73/190 (38.42%), Postives = 104/190 (54.74%), Query Frame = 0 Query: 247 GTIQIRNSQRSISLDIDV--LHNHIRGIMEIIGKDDHDVSLWLTNDRSIREYNDRYRGKRSATDILSFPFHEYKSPGVPTPESVALNGQIKDLGDMMVSTGYVQRQCARDE---ADWAAEGENQWSEERGASGAMARVYDVQGRLPFLVIHGLLHLLGYDHETEKEYEEMVREEERVISEFARRFPEAAP 432 G I +N Q ++ L+ID L + I IG + + VSL L D ++E N RG + TDILSFPF EY PG P + + LGD++V YV R+C D+ G SGAMAR+YD + R+ L+IHG+LHL+GYDHE +++YE MV +EE +++E P+ +P Sbjct: 51 GKILFQNDQTNV-LEIDEARLLETLNRIRRHIGYETYGVSLELIGDEEMQEINLESRGVDAPTDILSFPFSEYIEPGTLEPPQFDIPDYYQ-LGDLLVDVPYVMRRCQEDKXXXXXXXXXXXXXXXXXXGVSGAMARIYDAEERIHMLLIHGMLHLVGYDHEDDEDYELMVAKEEEILAELG-MLPKQSP 237
BLAST of NO02G01100 vs. NCBI_GenBank
Match: OEU18568.1 (zincin, partial [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 110.2 bits (274), Expect = 1.900e-20 Identity = 71/196 (36.22%), Postives = 108/196 (55.10%), Query Frame = 0 Query: 247 GTIQIRNSQRSI-SLDIDVLHNHIRGIMEIIGKDDHDVSLWLTNDRSIREYNDRYRGKRSATDILSFPFHEYKSPGVPTPESVALNGQIKD----------LGDMMVSTGYVQRQCARD----------EADWAAEGENQWSEERGASGAMARVYDVQGRLPFLVIHGLLHLLGYDHETEKEYEEMVREEERVISE 422 G + I N Q+SI ++ D + + I I ++IG D +DV++ L +D +RE N RG S TDILSFPFH+ P ++ A G +++ LGDM++ YV R+C D + D + G + +RG GAMA V D + R+ L++HG+LHL+GYDH +++Y EMV EE ++ E Sbjct: 15 GCVSIYNDQKSIKGINEDAISDTISKISKLIGYDTYDVTVLLVDDEEMRETNLESRGIDSPTDILSFPFHQ---PNFTANDNEA--GLLEEPEFDIPDYYTLGDMVICVPYVIRRCQEDILALGDDNDYDDDESDVGGVENDGDRGVCGAMADVRDPEKRIRMLLVHGMLHLVGYDHIEDEDYIEMVEREEEILKE 205
BLAST of NO02G01100 vs. NCBI_GenBank
Match: GAX22805.1 (hypothetical protein FisN_24Lh086 [Fistulifera solaris]) HSP 1 Score: 109.0 bits (271), Expect = 4.300e-20 Identity = 61/159 (38.36%), Postives = 89/159 (55.97%), Query Frame = 0 Query: 276 IGKDDHDVSLWLTNDRSIREYNDRYRGKRSATDILSFPFHEYKSPGVPTPESVALNGQIKDLGDMMVSTGYVQRQCARDE---ADWAAEGENQWSEERGASGAMARVYDVQGRLPFLVIHGLLHLLGYDHETEKEYEEMVREEERVISEFARRFPEAAP 432 IG + + VSL L D ++ N RG + +DILSFPF +Y PG P + + LGD++V YV R+C D+ G SGAMAR+YD + R+ L++HG+LHL+GYDHE + +YE MV +EE +++E FP+ +P Sbjct: 79 IGYETYGVSLELIGDEEMQAVNLESRGVDAPSDILSFPFSDYIEPGTLEPPQFDIPDYYQ-LGDLLVDVPYVMRRCQEDKEYXXXXXXXXXXXXXXXXGVSGAMARIYDAEERIHMLLVHGMLHLVGYDHEDDDDYELMVAKEEEILAELG-MFPKHSP 235
BLAST of NO02G01100 vs. NCBI_GenBank
Match: KKP26486.1 (hypothetical protein UR12_C0037G0005 [candidate division TM6 bacterium GW2011_GWF2_30_66]) HSP 1 Score: 107.1 bits (266), Expect = 1.600e-19 Identity = 60/179 (33.52%), Postives = 102/179 (56.98%), Query Frame = 0 Query: 249 IQIRNSQRSISLDIDVLHNHIRGIMEIIGKDDHDVSLWLTNDRSIREYNDRYRGKRSATDILSFPFHEYKSPG---VPTPESVALNGQIKD---LGDMMVSTGYVQRQCARDEADWAAEGENQWSEERGASGAMARVYDVQGRLPFLVIHGLLHLLGYDHETEKEYEEMVREEERVISE 422 I I+N+QR I ++ + +H++ I++I+ +++DV +WLT +++IREYN +R K TDILSFPF+ PG P P++ A QI+D LGD+++S + Q+ D N + A+ + L L++HGL HL+GYDH E++Y+ M ++E ++ + Sbjct: 2 IIIKNTQRKIKINTKKIEHHVKQILKILKYENYDVGIWLTTNKTIREYNKNFRKKDKPTDILSFPFYTELKPGERIKPLPKT-ATKEQIQDSQNLGDIIISPEFAQK-------DLFTTASNTKDQSASKKNAINNGANFDQHLKILLVHGLCHLIGYDHIKEQDYKIMHKKEMAILEK 172
BLAST of NO02G01100 vs. NCBI_GenBank
Match: KKP25835.1 (hypothetical protein UR14_C0004G0087 [candidate division TM6 bacterium GW2011_GWE2_31_21] >KKP53007.1 hypothetical protein UR43_C0008G0089 [candidate division TM6 bacterium GW2011_GWF2_33_332]) HSP 1 Score: 104.8 bits (260), Expect = 8.100e-19 Identity = 59/177 (33.33%), Postives = 97/177 (54.80%), Query Frame = 0 Query: 249 IQIRNSQRSISLDIDVLHNHIRGIMEIIGKDDHDVSLWLTNDRSIREYNDRYRGKRSATDILSFPFHEYKSPG----VPTPESVALNGQIKDLGDMMVSTGYVQRQCARDEADWAAEGENQWSEERGASGAMARVYDVQGRLPFLVIHGLLHLLGYDHETEKEYEEMVREEERVISE 422 I I+NSQ+ I +DI+ + ++ ++ + D DVSLW T D +IR++N +YR K ATDILSFP+H + PG + T E +LGD+++S +V++ D D+ +Y + L++HG+ HLLGYDHET+ +++ M + E+ ++SE Sbjct: 2 IFIKNSQKKIKIDINKIEQKLQKLLNFLKMKDFDVSLWFTTDTTIRKFNKKYRKKDKATDILSFPYHVHLKPGQKIEIKTEED-------NNLGDIIISLKFVKKHSELDGVDF-------------------NLY-----INILLVHGIAHLLGYDHETDSDFKVMQKFEKSLLSE 147 The following BLAST results are available for this feature:
BLAST of NO02G01100 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO02G01100 ID=NO02G01100|Name=NO02G01100|organism=Nannochloropsis oceanica|type=gene|length=1488bpback to top protein sequence of NO02G01100.1 >NO02G01100.1-protein ID=NO02G01100.1-protein|Name=NO02G01100.1|organism=Nannochloropsis oceanica|type=polypeptide|length=496bpback to top Synonyms
Publications
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