NO02G01060, NO02G01060 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO02G01060 vs. NCBI_GenBank
Match: EWM30596.1 (selenocysteine-specific elongation factor [Nannochloropsis gaditana]) HSP 1 Score: 720.3 bits (1858), Expect = 8.600e-204 Identity = 487/997 (48.85%), Postives = 577/997 (57.87%), Query Frame = 0 Query: 80 PSAVASPSLPTSLPLNINVGVMGHVDSGKTSLVRSLSNHLSTAALDKHPQSQERGITLDLGFSSFLLP---TLPSSLPSIPGEAFQITLVDCPGHASLIRTIIGGAQIIDLVLLLVDATRGLQAQTVECVILAEITTPSLVIALNKTDLFPEKEREGKVRDVTASLRKALEGSRFEHAPIIPVAAIVGGEKSVGASSSPPAAERAELVEPVATASKEGDKSVTGRVATLAGNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKNLGLDALCQALREAIRLPSRSAAGPLYLAVDHCFPIKGQGTVLTGTVLHGQVSVNDIIELPGLGQTRKVKSLQVFHAAVKSARQGDRVGLCVTNLDAKLIERGVACTPGSVRRADFAIGVVRKIRAFRGRVKTGTEVHVSVGHGTVMATVTFFGAKELERMRER-------------XXXXXXXXXXXVWSVPPLPFDWDKDYLYQEEMAGRKEGXXXXXXXXXXXXXXXXXXXXR--FQMQYVLLRFKSPVLCRVNSLLIGSRLDADTAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGGCRLAFHGTLLEVLKEEDLKSFLIYKPKLREGSIYRLGEPSHSPSSLLPSLPRYREVTAQGFFKKETTLGPFVGMEVETEDGQVGRLESGFGKGGKVRIRFDRGREGGAQGLKVGDKLYIKFRRFVFDPLKKMVQRRREG----GMGLLMGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPAAVSGDSYPEAHRXXXXXXXXXAFHPDQPLEGVDISALETTTAEMSLRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTYNTFSLATSSLAS---PLPAVRDMELRFGKVDAVRAGDLVIVKGFFSMEEDIRKYIGLKVVPTERGKEGGEEEGRRGPEGYVVGPFGKGGKAKVQFSSPFDGGVGTSLTLYVMTTARAGVDEGEGEGE 1052 PS + P +LP NINVGVMGHVDSGKTSLVR+LS HLSTA+LDKHPQSQERGITLDLGFSSFLLP PS S + Q+TLVDCPGH SLIRTIIGGAQIIDLVLLLVDAT+G+QAQTVECV+LAE+T P+LV+ALNK DLFP +ERE KVR TA+LR+AL SRF+ API+PVAA++GGE +VG SSS K +G +LGL+ L +AL++ I LP RS +GPL++AVDHCFP+KGQGTVLTGTVL G+VSV D++ELP LG TR+VKSLQ FH V A+ GDRVGLC+T+LDAK +ERG CTPGSV +A+G VR+IRAFRGRVK+G +HVSVGHGTVMAT+TFFGAKE+ R R++ W+ P PF W++DYLYQ EMAG E R +Q QY L +F++PVLC + L+IGSRLD D GGCRLAF GTLLE L EEDL IYKPK+REGSIYRLGE + PSL R+REVTAQGFFKKET+L PF+GMEVET GQVGRLESGFG+GGKVR+RFD +GG G VGDKL+++FRR+VFD K+MVQRR+ G G+ LL+G XXXXXXXXXXXXXXXXXXXXXXXXXXXX V LEGVD+SALE + + M L ++AT ++A+ L A D E R G ++ VRA LVIV G F+MEED+R Y L+V G EEG+ EGYVVGPFGKGGKAKVQF G G +TL + G + G+ E E Sbjct: 69 PSLASQP----ALPFNINVGVMGHVDSGKTSLVRALSTHLSTASLDKHPQSQERGITLDLGFSSFLLPYSAPSPSRASSSTPQTLQVTLVDCPGHGSLIRTIIGGAQIIDLVLLLVDATKGVQAQTVECVMLAEVTAPTLVVALNKIDLFPAEEREEKVRAATAALRRALRSSRFQDAPIVPVAAVMGGETAVG-SSSRGVXXXXXXXXXXXXXXXXXRKENSG------------------------------------------TRPPGEEHPGIMSLGLEDLSRALQKTISLPRRSPSGPLFMAVDHCFPLKGQGTVLTGTVLRGRVSVQDVVELPALGLTRRVKSLQAFHRRVTEAQHGDRVGLCLTHLDAKEMERGALCTPGSVPWVTWAVGAVRQIRAFRGRVKSGDRIHVSVGHGTVMATLTFFGAKEMVRGRQKDRKLRQPREGRDGEGVSDDGLEARPWAPPDFPFCWEEDYLYQAEMAGAVEDEEEGEKEAGFEVSKEGERRRRREYQEQYALFKFETPVLCPLPCLVIGSRLDVDIG-----------HRQHPEPPDRQQKPTHAQGAREGRLSPVWKGGCRLAFCGTLLEALSEEDLPRVRIYKPKMREGSIYRLGEALPALPKDPPSLARHREVTAQGFFKKETSLRPFLGMEVETAKGQVGRLESGFGRGGKVRVRFD--EKGGLAGGHVGDKLFLRFRRYVFDQEKRMVQRRQAGRDMSGLSLLLGEDTEPEVEVEGDRAEGGEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKRV--------------------------LEGVDLSALEDSASHMYLGSQHPAARGNALRDGPRDE------------------AVATEAVAAVPVQLGAEGDAEWRMGHIEKVRADGLVIVTGLFTMEEDVRNYKDLRV-----GLR--TEEGQEAVEGYVVGPFGKGGKAKVQFPRECHGLEGAWVTL-SFSLMPQGEETGKHEDE 953
BLAST of NO02G01060 vs. NCBI_GenBank
Match: XP_009037925.1 (putative selenocysteine-specific elongation factor, selB [Aureococcus anophagefferens] >EGB07292.1 putative selenocysteine-specific elongation factor, selB [Aureococcus anophagefferens]) HSP 1 Score: 429.9 bits (1104), Expect = 2.300e-116 Identity = 271/702 (38.60%), Postives = 373/702 (53.13%), Query Frame = 0 Query: 93 PLNINVGVMGHVDSGKTSLVRSLSNHLSTAALDKHPQSQERGITLDLGFSSFLLPTLPSSLPSIPGEAF-----QITLVDCPGHASLIRTIIGGAQIIDLVLLLVDATRGLQAQTVECVILAEITTPSLVIALNKTDLFPEKEREGKVRDVTASLRKALEGSRFEHAPIIPVAAIVGGEKSVGASSSPPAAERAELVEPVATASKEGDKSVTGRVATLAGNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKNLGLDALCQALREAIRLPSRSAAGPLYLAVDHCFPIKGQGTVLTGTVLHGQVSVNDIIELPGLGQTRKVKSLQVFHAAVKSARQGDRVGLCVTNLDAKLIERGVACTPGSVRRADFAIGVVRKIRAFRGRVKTGTEVHVSVGHGTVMATVTFFGAKELERMRERXXXXXXXXXXXVWSVPPLPFDWDKDYLYQEEMAG--RKEGXXXXXXXXXXXXXXXXXXXXRFQMQYVLLRFKSPVLCRVNSLLIGSRLDADTAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGGCRLAFHGTLLEVLKEEDLKSFL-IYKPKLREGSIYRLGEPSHSPSSLLPSLPRYREVTAQGFFKKETTLGPFVGMEVETEDGQVGRLESGFGKGGKVRIRFDRGREGGAQGLKVGDKLYIKFRRFVFDPLKKMVQ 787 PLNINVG+MGHVDSGKTSLV++LS LSTAALDK P+S+ RG+TLDLGFSSF +P LP L + F Q TLVDCPGHASLIRTIIGG+QIID+++L++D +G+Q QT EC+++ EITT L+I LNK D+ PE ER+ V T +R L S+F +A I+ AA VGGEK A+ + TA +LGL+ L + LR R+PSR GP + A+DHCFPI+GQGTV+TGT L G +VNDI+ELP +G +KVKS+Q+F VK GDR GLC++ LDA IERG+ PGSV + A+ +VRK+R FRG T + HV++GH T +AT FFGA EL + + PP FD ++Y++QE++A RK+G XXXX +Q+ LL+F++ V C++++L+IGS L+AD A CR+AFHG L+E + + + + +YK K +EG + +LG+P + ++V + FKKET + FVGM+++ G++GR+ S FGK GK ++ F G +K KLY+ F+++VF P K M Q Sbjct: 12 PLNINVGIMGHVDSGKTSLVKALSTTLSTAALDKAPESKARGMTLDLGFSSFSVP-LPDQLRAGVAGRFDEANLQFTLVDCPGHASLIRTIIGGSQIIDMMVLVMDVNKGIQTQTAECLVIGEITTSELIIVLNKVDVIPEAERDATVAKTTKRIRLQLASSKFANATIVTCAAAVGGEKRAAAA--------------LGTA---------------------------------------------------------------PSLGLEGLVETLRRRARMPSRDVEGPFFFAIDHCFPIRGQGTVVTGTALRGACAVNDIVELPEVGLEKKVKSMQMFRKPVKKIVCGDRAGLCLSQLDAAAIERGIVAAPGSVPGINSALALVRKVRFFRGPCDTDRKFHVTLGHTTTLATAYFFGAAELAARPKP-------------AEPPTAFDSSREYVFQEQLAASKRKKGADXXXXDGPGPGSDLNDE----PLQWCLLKFETRVRCQLDALVIGSNLEADA----------------------------------------LADKCRIAFHGKLVERVDGDAFATKVKLYKLKRKEGLVAKLGDPCVD----VTGARVVKDVVGKDLFKKETNMAAFVGMKLQAATGEMGRVASAFGKSGKFKVDFP-----GGTLVKPNGKLYLVFKKYVFSPSKAMHQ 569
BLAST of NO02G01060 vs. NCBI_GenBank
Match: XP_002176693.1 (predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1] >EEC51156.1 predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 425.6 bits (1093), Expect = 4.400e-115 Identity = 272/707 (38.47%), Postives = 376/707 (53.18%), Query Frame = 0 Query: 79 LPSAVASPSLP-TSLPLNINVGVMGHVDSGKTSLVRSLSNHLSTAALDKHPQSQERGITLDLGFSSFLLPTLPSSL-PSIPGEA-FQITLVDCPGHASLIRTIIGGAQIIDLVLLLVDATRGLQAQTVECVILAEITTPSLVIALNKTDLFPEKEREGKVRDVTASLRKALEGSRFEHAPIIPVAAIVGGEKSVGASSSPPAAERAELVEPVATASKEGDKSVTGRVATLAGNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKNLGLDALCQALREAIRLPSRSAAGPLYLAVDHCFPIKGQGTVLTGTVLHGQVSVNDIIELPGLGQTRKVKSLQVFHAAVKSARQGDRVGLCVTNLDAKLIERGVACTPGSVRRADFAIGVVRKIRAFRGRVKTGTEVHVSVGHGTVMATVTFFGAK-----ELERMRERXXXXXXXXXXXVWSVPPLPFDWDKDYLYQEEMAGRKEGXXXXXXXXXXXXXXXXXXXXRFQMQYVLLRFKSPVLCRVNSLLIGSRLDADTAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGGCRLAFHGTLLE-VLKEEDLKSFLIYKPKLREGSIYRLGEPSHSPSSLLPSLPRYREVTAQGFFKKETTLGPFVGMEVETEDGQVGRLESGFGKGGKVRIRFDRGREGGAQGLKVGDKLYIKFRRF 777 +PS LP LN+N+GV+GHVDSGKTSLV++LS LSTAALDK QS++RG+TLDLGFS F L +PS L S P + QITLVDCPGHASLIRTIIGGAQIID+VLL+VDA +G QAQT EC++LAE+T+P LV+ALNK D FP ER+ + A +R L+ +RF +API+ VAA VGGEK VA AS++ K + ++ L Q L++ + P R+ G Y +VDHCF I+G+GTVLTGTVL+G SVND++E P LG RK+KS+Q+F V+ +QGDR G+CV+NLDAKL+ERG+A TPG+V+ AI +VRK+ + G + +G++ H+SVGH T+MATVTF+ + + + + +P + F +++++++Q+++ +G + + LL F+ PV C ++SL+IGSRLD A CRLAF G L++ V +D+ +Y PK R G+I RLG+P L RY EV FKKET + F GM+V+TE ++G ++S FG GK R+ F G E K G+ L ++F+RF Sbjct: 1 MPSTGPDDRLPDQETVLNVNLGVLGHVDSGKTSLVKALSTLLSTAALDKSKQSRQRGMTLDLGFSCFFL-DMPSHLQASYPDKKNLQITLVDCPGHASLIRTIIGGAQIIDMVLLVVDAVKGWQAQTTECLVLAELTSPYLVVALNKADQFPPPERDQLLEQAAAKIRDRLKATRFANAPIVGVAACVGGEK-------------------VAAASEDMSK----------------------------------------------------LEVRNETYNMETLVQTLQDKLPPPKRTPEGSFYFSVDHCFSIRGRGTVLTGTVLNGAASVNDVLEFPTLGLDRKIKSIQMFKRQVQRIQQGDRAGVCVSNLDAKLLERGIAATPGAVQLLKGAIALVRKVPYYVGTLHSGSKFHISVGHTTIMATVTFWDLSVVNPVDTKPSKRYVGSSSLGGDADMAGLPRMTFSFEEEFIHQDDLLESLDGQESL-------------------LHWALLDFQIPVHCPMDSLVIGSRLDT------------------------------------VDNSTGSASACRLAFSGRLMQSVDPGKDISKLRLYTPKERRGTISRLGDPHKRTDD--DKLVRY-EVFGSDLFKKETNMKAFFGMKVQTERNEIGEIKSSFGTSGKYRVFFPAGTEA-----KEGEPLILRFKRF 572
BLAST of NO02G01060 vs. NCBI_GenBank
Match: CBN75652.1 (SelB, translation elongation factor specific to Sec-tRNA [Ectocarpus siliculosus]) HSP 1 Score: 425.2 bits (1092), Expect = 5.700e-115 Identity = 275/728 (37.77%), Postives = 372/728 (51.10%), Query Frame = 0 Query: 94 LNINVGVMGHVDSGKTSLVRSLSNHLSTAALDKHPQSQERGITLDLGFSSFLLPTLPSSLPSIPGEAFQITLVDCPGHASLIRTIIGGAQIIDLVLLLVDATRGLQAQTVECVILAEITTPS---LVIALNKTDLFPEKEREGKVRDVTASLRKALEGSRFEHAPIIPVAAIVGGEKSVGASSSPPAAERAELVEPVATASKEGDKSVTGRVATLAGNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKNLGLDALCQALREAIRLPSRSAAGPLYLAVDHCFPIKGQGTVLTGTVLHGQVSVNDIIELPGLGQTRKVKSLQVFHAAVKSARQGDRVGLCVTNLDAKLIERGVACTPGSVRRADFAIGVVRKIRAFRGRVKTGTEVHVSVGHGTVMATVTFFGAKELE--------------RMRERXXXXXXXXXXXVWSVPPLPFDWDKDYLYQEEMAGRKEGXXXXXXXXXXXXXXXXXXXXRFQMQYVLLRFKSPVLCRVNSLLIGSRLDADTAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGGCRLAFHGTLLEVLKE--------EDLKSFL----------IYKPKLREGSIYRLGEPSHSPSSLLPSLPRYREVTAQGFFKKETTLGPFVGMEVETEDGQVGRLESGFGKGGKVRIRFDRGREGGAQGLKVGDKLYIKFRRFVFDPLKKMVQ 787 LNINVG++GHVDSGKTSLV++LS LSTA+LDK+PQS+ERGITLDLGFS+F + +LP LP Q TLVDCPGHASLIRTIIGGAQI+D++LL+VDAT+G+QAQT ECV++ E S +++ LNK DL PE+ER+ ++R + L G++ A + AA VGGEK+ A+S+PPA R S +G TG L+GN +G+D + L R+PSR A+ PLY A DHCF ++GQGT+LTG V VN ++ELP L +KVKS+Q+F V AR GDRVG+CV +LDAKL+ERGV TPGSVR AI +VRK+ AF G+ +G HVS+GH T MAT TFFGA EL+ + E + + LPF + ++ Q + G R +QY L F +PV+ +S+++GSRLD+ ++ CR+AFHG L+ + + D ++ L ++ K + G ++R+ + + EV + FKKET + PFVGM + TE G VG LES FGK G+ + RF G +KVGDKL +KFR++ DP K+M Q Sbjct: 11 LNINVGILGHVDSGKTSLVKALSTVLSTASLDKNPQSRERGITLDLGFSAFTV-SLPEHLPQDQYSHLQFTLVDCPGHASLIRTIIGGAQIMDMMLLVVDATKGIQAQTTECVVIGEAVMSSGADVIVVLNKVDLIPEQERKARLRQAETEIAAQLAGTKLSSASFVSCAAAVGGEKT--AASTPPAGSR----------SSKGRAKKTG---VLSGNVGSAAGATSHEKGSKDVRPGGGDDAAEPLSGVTPPRPPSSCSEETSAMGIDTVAGELSRRARVPSRRASAPLYFAFDHCFSVRGQGTILTGXXXXXXVKVNQLVELPSLRLQKKVKSMQMFRKPVSIARAGDRVGMCVASLDAKLMERGVVTTPGSVRPISAAIALVRKVPAFTGQCLSGAYCHVSLGHSTAMATATFFGASELKNGLLGLFEHSADGLKALEALRDAGQGQDLSLNEIASLPFPSEAAFVQQTHLCG------AGSENSIAGADDEVCVDERPLLQYCHLTFHTPVITPPSSVVLGSRLDSTSSSPNKTEAAHPTGETIKGLAAVQEH-------------------CRIAFHGRLVSMSADVVGTRKGPGDARAALDFGTQAGQLKLFTEKRKTGVVFRVTPNDQTGGGAV-------EVFGKDLFKKETNMPPFVGMLLLTEGGSVGHLESTFGKAGRFKARFPAGTL-----VKVGDKLILKFRKYFRDPSKRMHQ 685
BLAST of NO02G01060 vs. NCBI_GenBank
Match: GBG26915.1 (Selenocysteine-specific elongation factor [Aurantiochytrium sp. FCC1311]) HSP 1 Score: 422.5 bits (1085), Expect = 3.700e-114 Identity = 260/691 (37.63%), Postives = 363/691 (52.53%), Query Frame = 0 Query: 94 LNINVGVMGHVDSGKTSLVRSLSNHLSTAALDKHPQSQERGITLDLGFSSFLLPTLPSSLPSIPGEAFQITLVDCPGHASLIRTIIGGAQIIDLVLLLVDATRGLQAQTVECVILAEITTPSLVIALNKTDLFPEKEREGKVRDVTASLRKALEGSRFEHAPIIPVAAIVGGEKSVGASSSPPAAERAELVEPVATASKEGDKSVTGRVATLAGNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKNLGLDALCQALREAIRLPSRSAAG--PLYLAVDHCFPIKGQGTVLTGTVLHGQVSVNDIIELPGLGQTRKVKSLQVFHAAVKSARQGDRVGLCVTNLDAKLIERGVACTPGSVRRADFAIGVVRKIRAFRGRVKTGTEVHVSVGHGTVMATVTFFGAKELERMRERXXXXXXXXXXXVWSVPPLPFDWDKDYLYQEEMAGRKEGXXXXXXXXXXXXXXXXXXXXRFQMQYVLLRFKSPVLCRVNSLLIGSRLDADTAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGGCRLAFHGTL----LEVLKEEDLKSFLIYKPKLREGSIYRLGEPSHSPSSLLPSLPRYREVTAQGFFKKETTLGPFVGMEVETEDGQVGRLESGFGKGGKVRIRFDRGREGGAQGLKVGDKLYIKFRRFVF 779 +N+NVGV+GHVDSGKTSLVR+LS LSTAALDKHPQS+ERGITLDLGFS+F + P L + Q TLVDCPGHASLIRTIIGGAQIID ++L+VD T+G+Q QT EC+++ EI T L++ LNK DL PE R V VT ++ +AL +RF+ +PI ++AIVGG+ G AA P T ++G +G + GL+ L Q +R +P R A PLY A+DHCFPIKGQGTV+TGT+L G V+V D++E+P LG RKVKS+Q+F V+ A +GDRV LC NL+A +ERG TPGSV AI ++RK+R F K+G+++HV+VGH T +A VTFFG+ EL+ + + ++P L FD ++++LY EE+ G + +Q+ LL F PV+C+ + +IGSRLD CR+AF+G + + EE+L +Y+ K R G++ R+ + + R R+V A+ F K+T + F+ + VET+ G GR++S FGK GK + F G +G +K GD+L ++ +R +F Sbjct: 8 VNVNVGVLGHVDSGKTSLVRALSTMLSTAALDKHPQSKERGITLDLGFSAFTVEA-PEQLADTGVKQVQYTLVDCPGHASLIRTIIGGAQIIDRMILVVDVTKGIQTQTAECLVIGEILTDDLIVVLNKIDLLPEATRTASVERVTKAIEQALSSTRFKGSPIACISAIVGGDGKAGVGEGSAAAPPQ---PPATTVKQQGQTGSSG----------------------------------------------------IETQGLEDLVQLIRRTTVMPERGDASKEPLYFAIDHCFPIKGQGTVVTGTMLGGTVNVGDMVEIPQLGLERKVKSMQMFRKPVEHAAKGDRVALCFANLNADALERGTITTPGSVPSTSAAIVLLRKVRFFPLACKSGSKLHVTVGHATTVAKVTFFGSAELKEVAAQHLGK---------NLPMLAFDHEQEFLYDEELRGGGKAKGGPF------------------LQWALLNFDQPVICQAGATVIGSRLDMSV----------------------------------------ETKSCRIAFYGRVASQYTKTPTEEELARLRVYRFKERHGAVDRIVDKKPD------EVGRVRDVVARSMFSKDTDMSKFINLTVETDAGATGRIQSAFGKTGKFNVHF--GGDGAV--VKKGDRLTLRHKRMIF 565
BLAST of NO02G01060 vs. NCBI_GenBank
Match: XP_002290286.1 (selenocysteine-specific elongation factor SelB, partial [Thalassiosira pseudonana CCMP1335] >EED92038.1 selenocysteine-specific elongation factor SelB, partial [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 419.9 bits (1078), Expect = 2.400e-113 Identity = 271/710 (38.17%), Postives = 366/710 (51.55%), Query Frame = 0 Query: 94 LNINVGVMGHVDSGKTSLVRSLSNHLSTAALDKHPQSQERGITLDLGFSSFLLPTLPSSL---PSIPG----------EAFQITLVDCPGHASLIRTIIGGAQIIDLVLLLVDATRGLQAQTVECVILAEITTPSLVIALNKTDLFPEKEREGKVRDVTASLRKALEGSRFEHAPIIPVAAIVGGEKSVGASSSPPAAERAELVEPVATASKEGDKSVTGRVATLAGNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKNLGLDALCQALREAIRLPSR-SAAGP--LYLAVDHCFPIKGQGTVLTGTVLHGQVSVNDIIELPGLGQTRKVKSLQVFHAAVKSARQGDRVGLCVTNLDAKLIERGVACTPGSVRRADFAIGVVRKIRAFRGRVKTGTEVHVSVGHGTVMATVTFFGAKELERMRERXXXXXXXXXXXVWSVPPLPFDWDKDYLYQEEMAGRKEGXXXXXXXXXXXXXXXXXXXXRFQMQYVLLRFKSPVLCRVNSLLIGSRLDADTAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGGCRLAFHGTLLEVLK-EEDLKSFLIYKPKLREGSIYRLGEPSHSPSSLLPSLPRYREVTAQGFFKKETTLGPFVGMEVETEDGQVGRLESGFGKGGKVRIRFDRGREGGAQGLKVGDKLYIKFRRFVFDPLKKMVQ 787 LN+NVGV+GHVD+GKTSLV++LS+ LSTA+LDK QS+ RGITLDLGFS+FLLP LP L S P + Q+TLVDCPGHASLIRTIIGGAQIID+VLL+VDAT+G+Q QT EC+++AE+TT +L++ LNK DLFPE ERE ++R +R +L G++FE+A ++ ++A VGGEK VA + G + L L+ IR PSR S P + AVDHCFPIKGQGTVLTGT L G ND++E P L +K+K LQ+F +QGDR G+CV+N DAKL+ERG+ +PG+V+ AI VVRK+R F+G + +G + HVSVGH TVMATVTF+GA+ + +P L FDW++D+L+Q++ + + L F +PV C ++SL+IGSRLD + A CRLAF G L+E + + D Y K + G++ RLG+P L RY EV FKKET + FVG+ +ET+ G +G ++S FG GK R+ F G + ++ GD LY++F+R+ DP K + Q Sbjct: 3 LNLNVGVLGHVDTGKTSLVKTLSSVLSTASLDKSKQSRARGITLDLGFSAFLLP-LPEHLRREASNPQQEQMQLQQKYDLLQVTLVDCPGHASLIRTIIGGAQIIDMVLLVVDATKGIQTQTAECLVIAEMTTRNLIVVLNKVDLFPENEREERIRMAEKKMRMSLRGTKFENAMMVGISACVGGEK----------------------------------VAAIGGTN-----------------------------------------------NIHGLLNILQSQIRAPSRDSKPSPDRFHFAVDHCFPIKGQGTVLTGTCLSGSARPNDMVEFPTLATQKKIKGLQMFRRKANIIQQGDRAGICVSNFDAKLMERGIIASPGTVKLIRGAIAVVRKVRFFKGGLHSGAKFHVSVGHTTVMATVTFWGAR---------------GSADLAGLPRLKFDWNQDFLHQDDYLEVLPSVDNNSNNNDESDKAKEKGLP--PLHWARLEFLTPVYCPIDSLVIGSRLDTEV----------------------------------------NANTCRLAFSGRLVERYEAKTDHNRLKSYTKKEKIGTVCRLGDPFRRSDD--NKLVRY-EVFGTDLFKKETNMSQFVGLLMETDRGDIGSIQSSFGTSGKFRVNFPAGTD-----IREGDPLYLRFKRYANDPKKAIHQ 565
BLAST of NO02G01060 vs. NCBI_GenBank
Match: GAX16209.1 (hypothetical protein FisN_3Hh309 [Fistulifera solaris]) HSP 1 Score: 419.1 bits (1076), Expect = 4.100e-113 Identity = 275/713 (38.57%), Postives = 372/713 (52.17%), Query Frame = 0 Query: 94 LNINVGVMGHVDSGKTSLVRSLSNHLSTAALDKHPQSQERGITLDLGFSSFLLPTLPSSLPS-IPG-EAFQITLVDCPGHASLIRTIIGGAQIIDLVLLLVDATRGLQAQTVECVILAEITTPSLVIALNKTDLFPEKEREGKVRDVTASLRKALEGSRFEHAPIIPVAAIVGGEKSVGASSSPPAAERAELVEPVATASKEGDKSVTGRVATLAGNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKNLGLDALCQALREAIRLPSRSAAG-----PLYLAVDHCFPIKGQGTVLTGTVLHGQVSVNDIIELPGLGQTRKVKSLQVFHAAVKSARQGDRVGLCVTNLDAKLIERGVACTPGSVRRADFAIGVVRKIRAF-RGRVKTGTEVHVSVGHGTVMATVTFFGAKEL-ERMRERXXXXXXXXXXXVW--------SVPPLPFDWDKDYLYQEEMAGRKEGXXXXXXXXXXXXXXXXXXXXRFQMQYVLLRFKSPVLCRVNSLLIGSRLD--ADTAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGGCRLAFHGTLLE-VLKEEDLKSFLIYKPKLREGSIYRLGEPSHSPSSLLPSLPRYREVTAQGFFKKETTLGPFVGMEVETEDGQVGRLESGFGKGGKVRIRFDRGREGGAQGLKVGDKLYIKFRRFVFDPLKKMVQ 787 LN+NVGV+GHVDSGKTSLV++LS LSTAALDK +S+ERG+TLDLGFS F L LP L P + QITLVDCPGHASLIRTIIGGAQIID+VLL+VDA +G QAQT EC++LA++T+P L++ALNK D+F ERE ++ + +R+ L G+RF AP++ VAA VGGEK A A+ E KS + +D L L+ + P RS P Y +VDHCFPI+G+GTVLTGTVL G +VND IE P LG RK+KS+Q+F V+ +QGDR G+CV+NLDAKL+ERG+ PG+V AI +VRK+ + G++ ++ H+SVGH TVMAT+TF+GA+EL + E W +P +PFD+ +D+++QE + + + + LL F++PV C +SL+IGSRLD DT G A CRLAF G L+E V + +Y K + G + +LG+P + Y EV FKKET + F+GM++ETE G +G ++S +G GK R+ F G E ++ G+ LY++F+RF+ DP K M Q Sbjct: 17 LNVNVGVLGHVDSGKTSLVKALSTLLSTAALDKSKESRERGMTLDLGFSCFFL-DLPEHLQQHFPDKKKLQITLVDCPGHASLIRTIIGGAQIIDMVLLIVDAVKGWQAQTTECLVLAQLTSPHLLVALNKADMFEPNEREKQLEAAKSKVRQRLIGTRFADAPMVGVAACVGGEK--------------------AAANAEETKS----------------------------------------------------SVLHETYQMDLLVDLLKAKLPPPRRSVTNEAKEQPFYFSVDHCFPIRGRGTVLTGTVLSGFAAVNDGIEFPSLGMDRKIKSIQMFKRQVQHIQQGDRAGICVSNLDAKLLERGIVAAPGAVPLWKGAIALVRKVPYYTSGKLMCNSKFHISVGHTTVMATLTFWGARELAHQAAEAKKDASSNKLMSSWLGGDADLAGLPKIPFDFQQDFVFQESLLEALD--------------TSPGNPQETLLHWALLDFQTPVYCPAHSLVIGSRLDVAVDTDG--------------------------------------GASSCRLAFSGRLIERVEPSTAMTQIRLYTEKQKVGVVSKLGDPHKRFDD--QKVVCY-EVFGDDLFKKETNMKLFIGMKMETEQGDIGEIKSSYGTSGKFRVYFPGGTE-----VQEGEPLYLRFKRFMHDPTKSMQQ 596
BLAST of NO02G01060 vs. NCBI_GenBank
Match: GAX10118.1 (hypothetical protein FisN_3Lh309 [Fistulifera solaris]) HSP 1 Score: 418.3 bits (1074), Expect = 7.000e-113 Identity = 275/713 (38.57%), Postives = 373/713 (52.31%), Query Frame = 0 Query: 94 LNINVGVMGHVDSGKTSLVRSLSNHLSTAALDKHPQSQERGITLDLGFSSFLLPTLPSSLPS-IPG-EAFQITLVDCPGHASLIRTIIGGAQIIDLVLLLVDATRGLQAQTVECVILAEITTPSLVIALNKTDLFPEKEREGKVRDVTASLRKALEGSRFEHAPIIPVAAIVGGEKSVGASSSPPAAERAELVEPVATASKEGDKSVTGRVATLAGNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKNLGLDALCQALREAIRLPSRSAAG-----PLYLAVDHCFPIKGQGTVLTGTVLHGQVSVNDIIELPGLGQTRKVKSLQVFHAAVKSARQGDRVGLCVTNLDAKLIERGVACTPGSVRRADFAIGVVRKIRAF-RGRVKTGTEVHVSVGHGTVMATVTFFGAKEL-ERMRERXXXXXXXXXXXVW--------SVPPLPFDWDKDYLYQEEMAGRKEGXXXXXXXXXXXXXXXXXXXXRFQMQYVLLRFKSPVLCRVNSLLIGSRLD--ADTAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGGCRLAFHGTLLE-VLKEEDLKSFLIYKPKLREGSIYRLGEPSHSPSSLLPSLPRYREVTAQGFFKKETTLGPFVGMEVETEDGQVGRLESGFGKGGKVRIRFDRGREGGAQGLKVGDKLYIKFRRFVFDPLKKMVQ 787 LN+NVGV+GHVDSGKTSLV++LS LSTAALDK +S+ERG+TLDLGFS F L LP L P + QITLVDCPGHASLIRTIIGGAQIID+VLL+VDA +G QAQT EC++LA++T+P L++ALNK D+F ERE ++ + +RK L+G+RF AP+I VAA VGGEK AA AE + A + +D L L+ + P RS P Y +VDHCFPI+G+GTVLTGTVL G +VND IE P LG RK+KS+Q+F V+ +QGDR G+CV+NLDAKL+ERG+ PG+V AI +VRK+ + G++ ++ HVSVGH TVMAT+TF+GA+EL + E W +P +PFD+ +D+++Q+ + + + + LL F++PV C +SL+IGSRLD D+ G A CRLAF G L+E V + +Y K + G + +LG+P + Y E+ FKKET + F+GM++ETE G +G ++S +G GK R+ F G E ++ G+ LY++F+RF+ DP K M Q Sbjct: 17 LNVNVGVLGHVDSGKTSLVKALSTLLSTAALDKSKESRERGMTLDLGFSCFFL-DLPEHLQKHFPDKKKLQITLVDCPGHASLIRTIIGGAQIIDMVLLIVDAVKGWQAQTTECLVLAQLTSPHLLVALNKADMFEPNEREKQLEAAKSKVRKRLKGTRFADAPMIGVAACVGGEK---------AAANAEETKTSAV---------------------------------------------------------------HETYQMDLLVDLLKAKLPPPRRSVTNEAKEQPFYFSVDHCFPIRGRGTVLTGTVLSGFAAVNDGIEFPSLGMDRKIKSIQMFKRQVQHIQQGDRAGICVSNLDAKLLERGIVAAPGAVPLWKGAIALVRKVPYYTSGKLMCNSKFHVSVGHTTVMATLTFWGARELAHQAAEAKNDASSNKLMSSWLGGDADLAGLPKIPFDFQQDFVFQDSLLETLD--------------IAPGDPQETLLHWALLDFQTPVYCPAHSLVIGSRLDVAVDSDG-------------------------------------GTASSCRLAFSGRLIERVEPSTAMTQIRLYTEKQKVGVVSKLGDPHKRFDD--QKVVCY-EIFGADLFKKETNMKLFIGMKMETEQGDIGEIKSSYGTSGKFRLYFPGGTE-----VQEGEPLYLRFKRFMHDPTKSMQQ 597
BLAST of NO02G01060 vs. NCBI_GenBank
Match: XP_004346488.1 (selenocysteinespecific elongation factor, putative [Acanthamoeba castellanii str. Neff] >ELR21543.1 selenocysteinespecific elongation factor, putative [Acanthamoeba castellanii str. Neff]) HSP 1 Score: 416.4 bits (1069), Expect = 2.700e-112 Identity = 272/701 (38.80%), Postives = 351/701 (50.07%), Query Frame = 0 Query: 86 PSLPTSLPLNINVGVMGHVDSGKTSLVRSLSNHLSTAALDKHPQSQERGITLDLGFSSFLLPTLPSSLPSIPGEAFQITLVDCPGHASLIRTIIGGAQIIDLVLLLVDATRGLQAQTVECVILAEITTPSLVIALNKTDLFPEKEREGKVRDVTASLRKALEGSRFEHAPIIPVAAIVGGEKSVGASSSPPAAERAELVEPVATASKEGDKSVTGRVATLAGNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKNLGLDALCQALREAIRLPSRSAAGPLYLAVDHCFPIKGQGTVLTGTVLHGQVSVNDIIELPGLGQTRKVKSLQVFHAAVKSARQGDRVGLCVTNLDAKLIERGVACTPGSVRRADFAIGVVRKIRAFRGRVKTGTEVHVSVGHGTVMATVTFFGAKELERMRERXXXXXXXXXXXVWSVPPLPFDWDKDYLYQEEM-AGRKEGXXXXXXXXXXXXXXXXXXXXRFQMQYVLLRFKSPVLCRVNSLLIGSRLDADTAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGGCRLAFHGTLLEVLKEEDLKSFLIYKPKLREGSIYRLGEPSHSPSSLLPSLPRYREVTAQGFFKKETTLGPFVGMEVETEDGQVGRLESGFGKGGKVRIRFDRGREGGAQGLKVGDKLYIKFRRFVFDPLKKMV 786 P+ P++ LNIN+G++GHVDSGKTSL ++LS STAA DK+PQS++RGITLDLGFS+F P L + Q TLVDCPGHASLIRTIIGGAQI+DL LL++DA +G+Q QT EC+++AE+TT L++ LNKTD+ P R V+ +R+ L+G++F AP++ VAA G E+ +PP LG+ L LRE LP RSA GP L+VDHCFP+KGQGTVLTGTVL G V VND IELP L +KVKSLQVFH V SA+QGDRVG+CVT LD+KL+ERG+A TPGSV AI +R+I+ F+ + T+ HV+VGH TVMAT FF P FD+ +YL Q+EM A +E R Q+ LLRF+ P+ C NSLLIGSRLD D + CR+AF+G LL D + +YK K REG I R+ + V +GFFKKET L F+G++VE G+VG LES FGK GK ++ F +G + KL++K+R F K+ + Sbjct: 4 PAAPSAATLNINLGILGHVDSGKTSLAKALSTLASTAAFDKNPQSKQRGITLDLGFSAFTTDPSP-RLRDAGYDQVQYTLVDCPGHASLIRTIIGGAQIMDLALLVIDAVKGIQTQTAECLVIAEMTTDRLLMVLNKTDMLPADNRAAHVKKAEERVRRGLKGTKFAEAPMVAVAACPGAEE-----GAPP-------------------------------------------------------------------------------LGITQLIDTLREMTELPRRSADGPFLLSVDHCFPVKGQGTVLTGTVLSGSVKVNDTIELPELKVQKKVKSLQVFHKPVPSAKQGDRVGMCVTQLDSKLLERGLAATPGSVVTMTSAIAALRRIKYFKQPILNRTKFHVTVGHTTVMATPLFFSLPTGAPQESAQL--------------PTTFDFSHEYLRQDEMLASTRE--------------------HRVGQQWALLRFEKPITCPPNSLLIGSRLDTD----------------------------------------IHSSACRIAFYGRLLGAADSPD-QGLKLYKHKQREGVIDRVQDE--------------YTVIGRGFFKKETDLTIFLGLKVEASTGEVGVLESPFGKTGKFKVHFPQGVPKDPKA-----KLHLKYRTFFLASDKRKI 525
BLAST of NO02G01060 vs. NCBI_GenBank
Match: XP_005992603.1 (PREDICTED: selenocysteine-specific elongation factor [Latimeria chalumnae]) HSP 1 Score: 408.7 bits (1049), Expect = 5.600e-110 Identity = 271/737 (36.77%), Postives = 362/737 (49.12%), Query Frame = 0 Query: 83 VASPSLPTSLPLNINVGVMGHVDSGKTSLVRSLSNHLSTAALDKHPQSQERGITLDLGFSSFLLPTLPSSLPSIPGEAFQITLVDCPGHASLIRTIIGGAQIIDLVLLLVDATRGLQAQTVECVILAEITTPSLVIALNKTDLFPEKEREGKVRDVTASLRKALEGSRFEHAPIIPVAAIVGGEKSVGASSSPPAAERAELVEPVATASKEGDKSVTGRVATLAGNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKNLGLDALCQALREAIRLPSRSAAGPLYLAVDHCFPIKGQGTVLTGTVLHGQVSVNDIIELPGLGQTRKVKSLQVFHAAVKSARQGDRVGLCVTNLDAKLIERGVACTPGSVRRADFAIGVVRKIRAFRGRVKTGTEVHVSVGHGTVMATVTFFGAKELERMRERXXXXXXXXXXXVWSVPPLPFDWDKDYLYQEEMAG---RKEGXXXXXXXXXXXXXXXXXXXXRFQMQYVLLRFKSPVLCRVNSLLIGSRLDADTAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGGCRLAFHGTLLEVLKEED-----LKSFLIYKPKLREGSIYRLGEPSHSPSSLLPSLPRYREVTAQGFFKKETTLGPFVGMEVETEDGQVGRLESGFGKGGKVRIRFDRG-REGGAQGLKV-------GDK-----------------LYIKFRRFVFDPLKKMVQ 787 +A+ +L LN N+GV+GH+DSGKTSL ++LS STAA DK+PQS+ERGITLDLGFSSF L P+ L S Q TLVDCPGHASLIRTIIGGAQIIDL++L++D T+G+Q Q+ EC+++ EIT P +V+ LNK DL PE +R+ V +T ++K LE +RF+ +PIIPVAA GG ++ P ++ A+ G+ L + L+ LP R GP +AVDHCF I+GQGTV+TGT+L G +S+ND +E+P L TRKVKS+Q+FH V SA QGDRVG+CVT D KL+ERG+ C+P S+R AI VRKI F+G + T + H++VGH TVM VTFF E V FD+ ++YLYQEE + EG + Q+ LL F+ PV C N L+IGS+LD D A CRLAFHG LLE +++ L I+K K + G + R+ + V + FKKET L FVG++V+ G+ G +E GFG+ GK ++R G E Q L + GDK + + F+R+VFDP KKM+Q Sbjct: 1 MAAAALADGKTLNFNIGVLGHIDSGKTSLAKALSTTASTAAFDKNPQSKERGITLDLGFSSFSL-DFPAQLAS-EHSRLQYTLVDCPGHASLIRTIIGGAQIIDLMMLVIDVTKGMQTQSAECLLIGEITCPKMVVVLNKIDLLPEGKRQAAVEKMTKRMQKTLENTRFQGSPIIPVAAKPGGPEA-------PESQTAQ--------------------------------------------------------------------------GIPELIELLKSQTYLPKRDPGGPFLMAVDHCFSIRGQGTVMTGTLLSGSLSINDNVEIPALKMTRKVKSMQMFHKPVTSAMQGDRVGVCVTQFDPKLLERGLVCSPESLRTLHAAIISVRKIPYFKGSIHTKAKFHITVGHETVMGKVTFFSLPSGE-------------------VTENSFDFTQEYLYQEEYHSGDPKVEGKANQQVADGSLP----------RQQWALLEFEKPVTCPRNCLVIGSKLDTD----------------------------------------IHANTCRLAFHGVLLEGFEDKKYPETCLPKLKIFKVKQKAGQVERVSDD--------------YTVIGRSLFKKETNLQLFVGLKVKLSSGEAGVIEGGFGQSGKFKVRLPGGLSEETKQLLSITSKRKSKGDKGDATKEDDGKAEKQPITIILAFKRYVFDPQKKMIQ 571 The following BLAST results are available for this feature:
BLAST of NO02G01060 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO02G01060 ID=NO02G01060|Name=NO02G01060|organism=Nannochloropsis oceanica|type=gene|length=5767bpback to top protein sequence of NO02G01060.2 >NO02G01060.2-protein ID=NO02G01060.2-protein|Name=NO02G01060.2|organism=Nannochloropsis oceanica|type=polypeptide|length=1054bpback to top protein sequence of NO02G01060.1 >NO02G01060.1-protein ID=NO02G01060.1-protein|Name=NO02G01060.1|organism=Nannochloropsis oceanica|type=polypeptide|length=1054bpback to top Synonyms
Publications
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