NO02G01040, NO02G01040 (gene) Nannochloropsis oceanica
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Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO02G01040 vs. NCBI_GenBank
Match: EWM30593.1 (myb-like dna-binding protein [Nannochloropsis gaditana]) HSP 1 Score: 214.9 bits (546), Expect = 7.000e-52 Identity = 122/251 (48.61%), Postives = 155/251 (61.75%), Query Frame = 0
Query: 20 TCNGESVNLPNI-TAASKLSQPLSFSNYHQPSYHVDGIGDSLGMPFSHPEESNQMLKGGDCRTVLHPTAQQIHLNQHRPSSLPLGIENNVECEGTSSHSSSLSQDDTLMFHQLANLKDQDESXXXXXXXXXXXXXXXXXXXXXKGFKKRAWTNTEDDTLRDLVEQHGAKDWNNISSQLPHRSAKQCCERWHNYLKPDIRKDAWCAPEDQIILDYHQAFCNKWSKIAEFLPGRTGNAVKNRYYCLMRRDRKN 270
T + + NLP+I TAA S S +H D + + E +K T++ TAQ+ H +HR S LP G + N++ EG SSH+SSL+ D T M Q + ++D DE+ KGFKKRAWT +ED LR+ V +GAKDWN ISS L RSAKQCCERWHNYLKPDIR+DAW ED++IL++H+AFCNKWSKIAE LPGRTGN+VKNRYYCL+RRD++N
Sbjct: 13 TFDDQRDNLPSISTAAPSTHYNPSSSVHHASRAPRDSAPEG---SWQTGREDIDSVKSDRSSTLVLSTAQKPH-EKHRSSWLPFGAD-NLDSEGGSSHTSSLTHDGT-MVQQTSEVQDYDEA------EGASPVHAGAAEAANKGFKKRAWTPSEDGILRESVSSNGAKDWNYISSLLTERSAKQCCERWHNYLKPDIRRDAWRPEEDKVILEFHRAFCNKWSKIAELLPGRTGNSVKNRYYCLLRRDKRN 251
BLAST of NO02G01040 vs. NCBI_GenBank
Match: XP_009520698.1 (hypothetical protein PHYSODRAFT_350123 [Phytophthora sojae] >EGZ25410.1 hypothetical protein PHYSODRAFT_350123 [Phytophthora sojae]) HSP 1 Score: 129.4 bits (324), Expect = 3.800e-26 Identity = 56/105 (53.33%), Postives = 75/105 (71.43%), Query Frame = 0
Query: 166 KRAWTNTEDDTLRDLVEQHGAKDWNNISSQLPHRSAKQCCERWHNYLKPDIRKDAWCAPEDQIILDYHQAFCNKWSKIAEFLPGRTGNAVKNRYYCLMRRDRKNT 271
KR WT E+D L LV+Q+GAK W+ I+ LP R KQC ERWHN+L P +RKDAW A ED +I + H+ N+W++I++ LPGRT NA+KNRYY MRR ++ +
Sbjct: 86 KRPWTREENDKLMQLVKQYGAKRWSLIAMHLPGRVGKQCRERWHNHLNPSVRKDAWTAEEDYVIFECHKNVGNQWAEISKMLPGRTDNAIKNRYYSTMRRMQRQS 190
BLAST of NO02G01040 vs. NCBI_GenBank
Match: ETI47068.1 (hypothetical protein F443_08670 [Phytophthora parasitica P1569] >ETK86996.1 hypothetical protein L915_08504 [Phytophthora parasitica]) HSP 1 Score: 129.4 bits (324), Expect = 3.800e-26 Identity = 56/105 (53.33%), Postives = 75/105 (71.43%), Query Frame = 0
Query: 166 KRAWTNTEDDTLRDLVEQHGAKDWNNISSQLPHRSAKQCCERWHNYLKPDIRKDAWCAPEDQIILDYHQAFCNKWSKIAEFLPGRTGNAVKNRYYCLMRRDRKNT 271
KR WT E+D L LV+Q+GAK W+ I+ LP R KQC ERWHN+L P +RKDAW A ED +I + H+ N+W++I++ LPGRT NA+KNRYY MRR ++ +
Sbjct: 104 KRPWTREENDKLMQLVKQYGAKRWSLIAMHLPGRVGKQCRERWHNHLNPSVRKDAWTAEEDYVIFECHKNVGNQWAEISKMLPGRTDNAIKNRYYSTMRRMQRQS 208
BLAST of NO02G01040 vs. NCBI_GenBank
Match: ETI47069.1 (hypothetical protein, variant [Phytophthora parasitica P1569] >ETK86997.1 hypothetical protein, variant [Phytophthora parasitica]) HSP 1 Score: 129.4 bits (324), Expect = 3.800e-26 Identity = 56/105 (53.33%), Postives = 75/105 (71.43%), Query Frame = 0
Query: 166 KRAWTNTEDDTLRDLVEQHGAKDWNNISSQLPHRSAKQCCERWHNYLKPDIRKDAWCAPEDQIILDYHQAFCNKWSKIAEFLPGRTGNAVKNRYYCLMRRDRKNT 271
KR WT E+D L LV+Q+GAK W+ I+ LP R KQC ERWHN+L P +RKDAW A ED +I + H+ N+W++I++ LPGRT NA+KNRYY MRR ++ +
Sbjct: 104 KRPWTREENDKLMQLVKQYGAKRWSLIAMHLPGRVGKQCRERWHNHLNPSVRKDAWTAEEDYVIFECHKNVGNQWAEISKMLPGRTDNAIKNRYYSTMRRMQRQS 208
BLAST of NO02G01040 vs. NCBI_GenBank
Match: ETL40410.1 (hypothetical protein L916_08433 [Phytophthora parasitica]) HSP 1 Score: 129.4 bits (324), Expect = 3.800e-26 Identity = 56/105 (53.33%), Postives = 75/105 (71.43%), Query Frame = 0
Query: 166 KRAWTNTEDDTLRDLVEQHGAKDWNNISSQLPHRSAKQCCERWHNYLKPDIRKDAWCAPEDQIILDYHQAFCNKWSKIAEFLPGRTGNAVKNRYYCLMRRDRKNT 271
KR WT E+D L LV+Q+GAK W+ I+ LP R KQC ERWHN+L P +RKDAW A ED +I + H+ N+W++I++ LPGRT NA+KNRYY MRR ++ +
Sbjct: 104 KRPWTREENDKLMQLVKQYGAKRWSLIAMHLPGRVGKQCRERWHNHLNPSVRKDAWTAEEDYVIFECHKNVGNQWAEISKMLPGRTDNAIKNRYYSTMRRMQRQS 208
BLAST of NO02G01040 vs. NCBI_GenBank
Match: ETL40411.1 (hypothetical protein, variant [Phytophthora parasitica]) HSP 1 Score: 129.4 bits (324), Expect = 3.800e-26 Identity = 56/105 (53.33%), Postives = 75/105 (71.43%), Query Frame = 0
Query: 166 KRAWTNTEDDTLRDLVEQHGAKDWNNISSQLPHRSAKQCCERWHNYLKPDIRKDAWCAPEDQIILDYHQAFCNKWSKIAEFLPGRTGNAVKNRYYCLMRRDRKNT 271
KR WT E+D L LV+Q+GAK W+ I+ LP R KQC ERWHN+L P +RKDAW A ED +I + H+ N+W++I++ LPGRT NA+KNRYY MRR ++ +
Sbjct: 104 KRPWTREENDKLMQLVKQYGAKRWSLIAMHLPGRVGKQCRERWHNHLNPSVRKDAWTAEEDYVIFECHKNVGNQWAEISKMLPGRTDNAIKNRYYSTMRRMQRQS 208
BLAST of NO02G01040 vs. NCBI_GenBank
Match: ETL93564.1 (hypothetical protein L917_08331 [Phytophthora parasitica]) HSP 1 Score: 129.4 bits (324), Expect = 3.800e-26 Identity = 56/105 (53.33%), Postives = 75/105 (71.43%), Query Frame = 0
Query: 166 KRAWTNTEDDTLRDLVEQHGAKDWNNISSQLPHRSAKQCCERWHNYLKPDIRKDAWCAPEDQIILDYHQAFCNKWSKIAEFLPGRTGNAVKNRYYCLMRRDRKNT 271
KR WT E+D L LV+Q+GAK W+ I+ LP R KQC ERWHN+L P +RKDAW A ED +I + H+ N+W++I++ LPGRT NA+KNRYY MRR ++ +
Sbjct: 104 KRPWTREENDKLMQLVKQYGAKRWSLIAMHLPGRVGKQCRERWHNHLNPSVRKDAWTAEEDYVIFECHKNVGNQWAEISKMLPGRTDNAIKNRYYSTMRRMQRQS 208
BLAST of NO02G01040 vs. NCBI_GenBank
Match: ETL93565.1 (hypothetical protein, variant [Phytophthora parasitica]) HSP 1 Score: 129.4 bits (324), Expect = 3.800e-26 Identity = 56/105 (53.33%), Postives = 75/105 (71.43%), Query Frame = 0
Query: 166 KRAWTNTEDDTLRDLVEQHGAKDWNNISSQLPHRSAKQCCERWHNYLKPDIRKDAWCAPEDQIILDYHQAFCNKWSKIAEFLPGRTGNAVKNRYYCLMRRDRKNT 271
KR WT E+D L LV+Q+GAK W+ I+ LP R KQC ERWHN+L P +RKDAW A ED +I + H+ N+W++I++ LPGRT NA+KNRYY MRR ++ +
Sbjct: 104 KRPWTREENDKLMQLVKQYGAKRWSLIAMHLPGRVGKQCRERWHNHLNPSVRKDAWTAEEDYVIFECHKNVGNQWAEISKMLPGRTDNAIKNRYYSTMRRMQRQS 208
BLAST of NO02G01040 vs. NCBI_GenBank
Match: ETM46823.1 (hypothetical protein L914_08382 [Phytophthora parasitica]) HSP 1 Score: 129.4 bits (324), Expect = 3.800e-26 Identity = 56/105 (53.33%), Postives = 75/105 (71.43%), Query Frame = 0
Query: 166 KRAWTNTEDDTLRDLVEQHGAKDWNNISSQLPHRSAKQCCERWHNYLKPDIRKDAWCAPEDQIILDYHQAFCNKWSKIAEFLPGRTGNAVKNRYYCLMRRDRKNT 271
KR WT E+D L LV+Q+GAK W+ I+ LP R KQC ERWHN+L P +RKDAW A ED +I + H+ N+W++I++ LPGRT NA+KNRYY MRR ++ +
Sbjct: 104 KRPWTREENDKLMQLVKQYGAKRWSLIAMHLPGRVGKQCRERWHNHLNPSVRKDAWTAEEDYVIFECHKNVGNQWAEISKMLPGRTDNAIKNRYYSTMRRMQRQS 208
BLAST of NO02G01040 vs. NCBI_GenBank
Match: ETM46824.1 (hypothetical protein, variant [Phytophthora parasitica]) HSP 1 Score: 129.4 bits (324), Expect = 3.800e-26 Identity = 56/105 (53.33%), Postives = 75/105 (71.43%), Query Frame = 0
Query: 166 KRAWTNTEDDTLRDLVEQHGAKDWNNISSQLPHRSAKQCCERWHNYLKPDIRKDAWCAPEDQIILDYHQAFCNKWSKIAEFLPGRTGNAVKNRYYCLMRRDRKNT 271
KR WT E+D L LV+Q+GAK W+ I+ LP R KQC ERWHN+L P +RKDAW A ED +I + H+ N+W++I++ LPGRT NA+KNRYY MRR ++ +
Sbjct: 104 KRPWTREENDKLMQLVKQYGAKRWSLIAMHLPGRVGKQCRERWHNHLNPSVRKDAWTAEEDYVIFECHKNVGNQWAEISKMLPGRTDNAIKNRYYSTMRRMQRQS 208 The following BLAST results are available for this feature:
BLAST of NO02G01040 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO02G01040 ID=NO02G01040|Name=NO02G01040|organism=Nannochloropsis oceanica|type=gene|length=3774bpback to top protein sequence of NO02G01040.1 >NO02G01040.1-protein ID=NO02G01040.1-protein|Name=NO02G01040.1|organism=Nannochloropsis oceanica|type=polypeptide|length=623bpback to top Synonyms
Publications
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