NO02G00970, NO02G00970 (gene) Nannochloropsis oceanica

Overview
NameNO02G00970
Unique NameNO02G00970
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1465
Alignment locationchr2:304884..306348 +

Link to JBrowse

Properties
Property NameValue
DescriptionPyrroline-5-carboxylate reductase
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr2genomechr2:304884..306348 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0160542021-01-14
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PXD0087212019-04-30
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
GO:0009987cellular process
GO:0009058biosynthetic process
Vocabulary: INTERPRO
TermDefinition
IPR0089276-PGluconate_DH_C-like
IPR036291NAD(P)-bd_dom_sf
IPR028939ProC_N
IPR029036P5CR_dimer
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
Homology
BLAST of NO02G00970 vs. NCBI_GenBank
Match: EWM30577.1 (pyrroline-5-carboxylate reductase [Nannochloropsis gaditana])

HSP 1 Score: 464.2 bits (1193), Expect = 3.400e-127
Identity = 246/323 (76.16%), Postives = 275/323 (85.14%), Query Frame = 0
Query:    1 MSEQPARIPPA-----AIASTPQHPQHALSRP----GTHKAGEGERPKLTLGFLGGGMMASALIKGLVKAEVLPNFAIFVSDPYKPSRDKLVAEVGVTGCDTNIEVAEHAQVIILAVKPDVVPQVLRELSQRVTPRHLIISIAAGATLQLLQHQLPDRSRVVRVMPNTPCLVGQSAAAFAMGDNCLPEDAALVKKIFSAVGAAFEVKEKDLNAVTGLSGSGPAYIFLLIEALADGGVRAGLPRNIAMQLATQTVKGAATMVQLTGEHPGVLKDQVASPGGTTIAGIEALEKGSFRATVMSAVTASADRAKQLAEQSKPTPNPR 315
            MSE P R  P+            HPQHA   P    G  K+GEGE+ K T+GF+GGGMMASALI+GLVKA V+PNFAI VSDPYKP RDKL AEVGV   D NI+V EHAQVI+LAVKPD++PQVLRELSQRVT  HLIISIAAGATLQL++HQLPD++RVVRVMPNTPCLVG+ AAAFA+G +CLPEDA LVK+IFSAVGAAFEVKEKDLNAVTGLSGSGPAY+F++IEA+ADGGVRAGLPRN+AMQLA QTVKGAATMVQLTGEHPGVLKDQVASPGGTTI GIEALEKG  R+TV+ AV A+A+R+KQLAE SKPTPNPR
Sbjct:    1 MSEAPTRQAPSXXXXXXXXXXXXHPQHAKPGPLRPAGGAKSGEGEK-KFTVGFIGGGMMASALIRGLVKAGVVPNFAISVSDPYKPMRDKLAAEVGVIAYDDNIQVIEHAQVIVLAVKPDIIPQVLRELSQRVTRHHLIISIAAGATLQLMEHQLPDQTRVVRVMPNTPCLVGECAAAFALGGSCLPEDAVLVKRIFSAVGAAFEVKEKDLNAVTGLSGSGPAYVFMMIEAMADGGVRAGLPRNVAMQLAAQTVKGAATMVQLTGEHPGVLKDQVASPGGTTITGIEALEKGGLRSTVIGAVVAAAERSKQLAESSKPTPNPR 322          
BLAST of NO02G00970 vs. NCBI_GenBank
Match: GAQ80892.1 (pyrroline-5-carboxylate reductase [Klebsormidium nitens])

HSP 1 Score: 285.4 bits (729), Expect = 2.100e-73
Identity = 154/266 (57.89%), Postives = 196/266 (73.68%), Query Frame = 0
Query:   40 LTLGFLGGGMMASALIKGLVKAEVLPNFAIFVSDPYKPSRDKLVAEVGVTGCDTNIEVAEHAQVIILAVKPDVVPQVLRELSQRVTPRHLIISIAAGATLQLLQHQLPDRSRVVRVMPNTPCLVGQSAAAFAMGDNCLPEDAALVKKIFSAVGAAFEVKEKDLNAVTGLSGSGPAYIFLLIEALADGGVRAGLPRNIAMQLATQTVKGAATMVQLTGEHPGVLKDQVASPGGTTIAGIEALEKGSFRATVMSAVTASADRAKQLAE 306
            + +GF+G G MA A+ +G  KA V+P    F +DP   +R ++ +  GVT   +N+EVAE + VI LAVKP VV +VL EL   +T RHLI+SIAAG TL+ LQ      +R+VRVMPNTPCLVG++AAA ++G +    D  LV+K+FSAVG    V E  L+AVTGLSGSGPAYIF+ IEALADGGV AGLPR+IA+ LA QTVKGAA MV  TG+HPGVLKD VASPGGTTIAG+  LEKG  R+T+++AV A+A R+K+L++
Sbjct:  121 VNVGFIGAGQMAEAMARGFSKAGVVPASQQFATDP-SEARREVFSSFGVTALQSNVEVAEKSDVIFLAVKPYVVKKVLEELQTTLTERHLIVSIAAGVTLEQLQAAAGKGARIVRVMPNTPCLVGETAAALSLGKHATEADGELVQKLFSAVGLVHVVPENLLDAVTGLSGSGPAYIFIAIEALADGGVAAGLPRDIALSLAAQTVKGAAEMVLQTGKHPGVLKDSVASPGGTTIAGLHELEKGGVRSTLINAVLAAAQRSKELSK 385          
BLAST of NO02G00970 vs. NCBI_GenBank
Match: CBJ27579.1 (delta-1-pyrroline-5-carboxylate reductase [Ectocarpus siliculosus])

HSP 1 Score: 284.3 bits (726), Expect = 4.800e-73
Identity = 155/267 (58.05%), Postives = 194/267 (72.66%), Query Frame = 0
Query:   42 LGFLGGGMMASALIKGLVKAEVLPNFAIFVSDPYKPSRDKLVAEVGVTGCDTNIEVAEHAQVIILAVKPDVVPQVLRELSQRVTPRHLIISIAAGATLQLLQHQLPDRSRVVRVMPNTPCLVGQSAAAFAMGDNCLPEDAALVKKIFSAVGAAFEVKEKDLNAVTGLSGSGPAYIFLLIEALADGGVRAGLPRNIAMQLATQTVKGAATMVQLTGEHPGVLKDQVASPGGTTIAGIEALEKGSFRATVMSAVTASADRAKQLAEQSK 309
            LGF+G GMM+SA+I G++ A+V     I  SD Y+PS D+L A  GV    TN EV   A VI+LAVKPDV+P VL E+ Q +T   L++SIAAG  L  L++ +P + RV+RVMPNTPCLV +SAAAF++G +   ED  LV+ + S+VG A EVKE  L+AVTG+SGSGPAYIF+LIEALADGGVR GLPR  A++LA QTVKGAATMV  TG HPGVLKD V SPGGTTI  +EALEK  FRA  +SAV A+ +++ ++    K
Sbjct:   15 LGFIGAGMMSSAMINGIIAAKVTEPGNIIASDVYQPSLDRLSAS-GVRTSTTNKEVVTGADVIVLAVKPDVIPAVLTEIEQFLTDDSLVVSIAAGVPLSALENLVPGK-RVIRVMPNTPCLVSESAAAFSLGSHAKDEDRELVQSLLSSVGFACEVKESQLDAVTGVSGSGPAYIFVLIEALADGGVRMGLPRATALKLAAQTVKGAATMVLETGTHPGVLKDNVCSPGGTTICAVEALEKNGFRAAAISAVVAATNKSLEMRNTKK 279          
BLAST of NO02G00970 vs. NCBI_GenBank
Match: WP_007416296.1 (pyrroline-5-carboxylate reductase [Pedosphaera parvula] >EEF59623.1 pyrroline-5-carboxylate reductase [Pedosphaera parvula Ellin514])

HSP 1 Score: 278.9 bits (712), Expect = 2.000e-71
Identity = 146/267 (54.68%), Postives = 188/267 (70.41%), Query Frame = 0
Query:   39 KLTLGFLGGGMMASALIKGLVKAEVLPNFAIFVSDPYKPSRDKLVAEVGVTGCDTNIEVAEHAQVIILAVKPDVVPQVLRELSQRVTPRHLIISIAAGATLQLLQHQLPDRSRVVRVMPNTPCLVGQSAAAFAMGDNCLPEDAALVKKIFSAVGAAFEVKEKDLNAVTGLSGSGPAYIFLLIEALADGGVRAGLPRNIAMQLATQTVKGAATMVQLTGEHPGVLKDQVASPGGTTIAGIEALEKGSFRATVMSAVTASADRAKQLAE 306
            KLT+GFLG G M +AL KG ++A ++    I  SDP + +      EVG     +N+EVA  A V++LAVKPD V  VL E+  + T  HLIISIAAG  L  ++  LP  SR +RVMPNTP +VGQSA A+A G +  PED  L +K+FSAVG AF+VKE  L+AVTGLSGSGPAY++++IEAL+DGGV +GLPR+IA +LA QT+ G A MV  TG HPG LKD V SPGGTTI G+  LEKG  R T+M+AV A+ +++K+L +
Sbjct:    4 KLTIGFLGAGKMGTALAKGFIQAGLVSAEQIIASDPIEAAGKSFAKEVGAKVTSSNVEVARFANVLLLAVKPDQVSGVLAEIRDQFTKDHLIISIAAGVPLAKIEAGLPANSRAIRVMPNTPAIVGQSATAYAFGKSTTPEDGQLAQKLFSAVGVAFQVKEALLDAVTGLSGSGPAYVYMIIEALSDGGVASGLPRDIATKLAAQTLLGGAKMVLETGMHPGALKDMVTSPGGTTIEGVHELEKGQLRGTLMNAVRAATEKSKKLGQ 270          
BLAST of NO02G00970 vs. NCBI_GenBank
Match: WP_088259042.1 (pyrroline-5-carboxylate reductase [Fimbriiglobus ruber] >OWK35957.1 Pyrroline-5-carboxylate reductase [Fimbriiglobus ruber])

HSP 1 Score: 276.6 bits (706), Expect = 1.000e-70
Identity = 146/266 (54.89%), Postives = 183/266 (68.80%), Query Frame = 0
Query:   40 LTLGFLGGGMMASALIKGLVKAEVLPNFAIFVSDPYKPSRDKLVAEVGVTGCDTNIEVAEHAQVIILAVKPDVVPQVLRELSQRVTPRHLIISIAAGATLQLLQHQLPDRSRVVRVMPNTPCLVGQSAAAFAMGDNCLPEDAALVKKIFSAVGAAFEVKEKDLNAVTGLSGSGPAYIFLLIEALADGGVRAGLPRNIAMQLATQTVKGAATMVQLTGEHPGVLKDQVASPGGTTIAGIEALEKGSFRATVMSAVTASADRAKQLAE 306
            L +GFLG G MA+AL  G   A +L       SDPY  +RDK  +  G+     N EV    +V+ILAVKP  +  VL EL+   T RHL +SIAAG TL  L   L  ++RV+RVMPNTPCL+G SA+ FA G    PED ALV ++F AVG AF + E  L+AVTGLSGSGPA+++++IEALADGGVR GLPR++A+ LA QTV G+A MV  TG+HPG LKD VASPGGTTIAG+ ALE+G  RA +M AV A+  RA++L +
Sbjct:    5 LAIGFLGAGQMATALANGWTAAGLLDPARSLASDPYPAARDKFASATGIRAVAGNAEVVAGCEVVILAVKPQTMAAVLAELATVATDRHLFVSIAAGVTLGALSAGLGSKARVIRVMPNTPCLLGASASGFAAGPAATPEDVALVARLFGAVGKAFALPEHQLDAVTGLSGSGPAFVYVMIEALADGGVRVGLPRDVALALAAQTVLGSAKMVLETGQHPGALKDAVASPGGTTIAGLHALERGGVRAALMDAVEAATKRAQELGK 270          
BLAST of NO02G00970 vs. NCBI_GenBank
Match: WP_002647263.1 (pyrroline-5-carboxylate reductase [Gimesia maris] >EDL58525.1 pyrroline-5-carboxylate reductase [Gimesia maris DSM 8797])

HSP 1 Score: 273.5 bits (698), Expect = 8.400e-70
Identity = 145/264 (54.92%), Postives = 183/264 (69.32%), Query Frame = 0
Query:   42 LGFLGGGMMASALIKGLVKAEVLPNFAIFVSDPYKPSRDKLVAEVGVTGCDTNIEVAEHAQVIILAVKPDVVPQVLRELSQRVTPRHLIISIAAGATLQLLQHQLPDRSRVVRVMPNTPCLVGQSAAAFAMGDNCLPEDAALVKKIFSAVGAAFEVKEKDLNAVTGLSGSGPAYIFLLIEALADGGVRAGLPRNIAMQLATQTVKGAATMVQLTGEHPGVLKDQVASPGGTTIAGIEALEKGSFRATVMSAVTASADRAKQLAE 306
            +GF+G G MA+AL  GL+ +       +  SD Y+ + +K   E G     +N +V E A++IIL+VKP  +P VL+E+   VT +HL+ISIAAG  L L    L + +R++RVMPNTPCLV Q A+AFA G     EDA LV+ + S VG AFEV E  L+AVTGLSGSGPAYI+ +IEAL+DGGVR GLPR IA QLA QTVKGAA MV  TGEHPG LKD V SPGGTTIAGI ALE G  R ++M+AV+A+  R+ +L +
Sbjct:    9 VGFIGAGRMATALAGGLISSGFTTKDHVCASDTYEAASEKFAQETGARSVSSNQQVMEQAEIIILSVKPQQIPDVLQEIKSSVTSQHLLISIAAGCPLSLFLDTLGEFTRMIRVMPNTPCLVKQGASAFARGGQASTEDATLVESLLSTVGIAFEVPESQLDAVTGLSGSGPAYIYQVIEALSDGGVRVGLPRQIATQLAAQTVKGAAEMVLQTGEHPGTLKDAVTSPGGTTIAGIHALEAGGLRNSLMNAVSAATSRSIELGQ 272          
BLAST of NO02G00970 vs. NCBI_GenBank
Match: XP_011401905.1 (Pyrroline-5-carboxylate reductase [Auxenochlorella protothecoides] >KFM28856.1 Pyrroline-5-carboxylate reductase [Auxenochlorella protothecoides])

HSP 1 Score: 270.0 bits (689), Expect = 9.300e-69
Identity = 142/264 (53.79%), Postives = 188/264 (71.21%), Query Frame = 0
Query:   42 LGFLGGGMMASALIKGLVKAEVLPNFAIFVSDPYKPSRDKLVAEVGVTGCDTNIEVAEHAQVIILAVKPDVVPQVLRELSQRVTPRHLIISIAAGATLQLLQHQLPDRSRVVRVMPNTPCLVGQSAAAFAMGDNCLPEDAALVKKIFSAVGAAFEVKEKDLNAVTGLSGSGPAYIFLLIEALADGGVRAGLPRNIAMQLATQTVKGAATMVQLTGEHPGVLKDQVASPGGTTIAGIEALEKGSFRATVMSAVTASADRAKQLAE 306
            +GF+G G MA AL +G +   ++    +F +DP + +R ++    G    D NI VAE A+VI +AVKP  VP VLRE+S ++T +HLI+SIAAG TL +L      +++++RVMPNTPCLVG++AAA  +G      DA L++++F +VG  F V EK L+AVTGLSGSGPAYIFL+IEAL+DGGVRAGLPR++A  LA QTV G+A +V  TG+HPG LKD V SP GTTIAG+  LEK   RA  M+AVTA++ RA +LAE
Sbjct:    7 IGFIGAGQMAEALARGFINQNMVEAEHVFCTDPVE-ARKEVFRSFGTVPVDGNIAVAEAAEVIFIAVKPQYVPVVLREISPKLTEKHLIVSIAAGVTLAVLTEAAGPKAKIIRVMPNTPCLVGETAAAMCLGHGAGSADADLLQRLFESVGRIFRVDEKLLSAVTGLSGSGPAYIFLVIEALSDGGVRAGLPRDVAQALAAQTVLGSAKLVLETGKHPGALKDMVTSPAGTTIAGVHELEKAGIRAAFMNAVTAASARADELAE 269          
BLAST of NO02G00970 vs. NCBI_GenBank
Match: XP_004342330.1 (pyrroline5-carboxylate reductase [Acanthamoeba castellanii str. Neff] >ELR20220.1 pyrroline5-carboxylate reductase [Acanthamoeba castellanii str. Neff])

HSP 1 Score: 269.2 bits (687), Expect = 1.600e-68
Identity = 148/267 (55.43%), Postives = 190/267 (71.16%), Query Frame = 0
Query:   42 LGFLGGGMMASALIKGLVKAEVLPNFAIFVSDPYKPSRDKLVAEVGVTGCDT--NIEVAEHAQVIILAVKPDVVPQVLRELSQRV-TPRHLIISIAAGATLQLLQHQLPDRSRVVRVMPNTPCLVGQSAAAFAMGDNCLPEDAALVKKIFSAVGAAFEVKEKDLNAVTGLSGSGPAYIFLLIEALADGGVRAGLPRNIAMQLATQTVKGAATMVQLTGEHPGVLKDQVASPGGTTIAGIEALEKGSFRATVMSAVTASADRAKQLAE 306
            + FLG G MA+AL +G + A V     I  SD Y+P   +   + G +   T  N+E  E++ V+IL+VKP V+  +L+E+   V +  HLIISIAAG T+  +  QL   +RVVRVMPNTPCLVG++AAAF++G    PED  LV  + S+VG   EV E+ L+AVTGLSGSGPAY++  IEAL+DGGV AGLPR++A +LA QTV GAA MV  TGEHPGVLKD+VASPGGTTIAGI ALE G  RATVM+AV A+ +R+K+LA+
Sbjct:    6 IAFLGAGQMATALARGFIDANVTRPENIIASDAYEPQLPRFQKDTGGSTKTTKSNLEAVENSDVVILSVKPQVMSTLLKEIKDAVASSPHLIISIAAGITIDTITKQLGSDTRVVRVMPNTPCLVGKTAAAFSLGGKATPEDGKLVAHLLSSVGLGTEVPERLLDAVTGLSGSGPAYVYQFIEALSDGGVAAGLPRDVAAKLAAQTVLGAAQMVVQTGEHPGVLKDKVASPGGTTIAGIHALENGRLRATVMNAVLAATERSKELAK 272          
BLAST of NO02G00970 vs. NCBI_GenBank
Match: EJK49118.1 (hypothetical protein THAOC_32036 [Thalassiosira oceanica])

HSP 1 Score: 268.1 bits (684), Expect = 3.500e-68
Identity = 153/264 (57.95%), Postives = 185/264 (70.08%), Query Frame = 0
Query:   41 TLGFLGGGMMASALIKGLVKAEVLPNFAIFVSDPYKPSRDKLVAEVGVTGCDTNIEVAEHAQ-VIILAVKPDVVPQVLRELSQRVTPRHLIISIAAGATLQLLQHQLPDRSRVVRVMPNTPCLVGQSAAAFAMGDNCLPEDAALVKKIFSAVGAAFEVKEKDLNAVTGLSGSGPAYIFLLIEALADGGVRAGLPRNIAMQLATQTVKGAATMVQLTGEHPGVLKDQVASPGGTTIAGIEALEKGSFRATVMSAVTASADRAKQL 304
            TLGFLG G MASAL  G+V   +     I  SD +KP+R+K  A+ G    + N  V E+++  I LAVKP+ V    +++ +      LIISIAAG TL+ L+  LP R RVVRVMPNTPCLVG+ AA FA+G     +D  LVK++  AVG A EV E  LNA+TGLSGSGPAY+F  IEAL+DGGVRAGLPRN+A QLA QTVKGAA MV  TG+HPG LKD V SPGGTTIAG+EALEKG FRA  +SAVT++  R+ QL
Sbjct:    3 TLGFLGAGQMASALADGIVSNGLRKPNQIHCSDIWKPAREKAQAK-GYNAYELNSGVCENSEDAIFLAVKPNCVAAACKDVMESKDSGALIISIAAGVTLETLEDSLPGR-RVVRVMPNTPCLVGEQAAGFALGGLATDDDRRLVKELLDAVGVAMEVNEILLNAITGLSGSGPAYVFQFIEALSDGGVRAGLPRNVATQLAAQTVKGAAEMVLKTGKHPGELKDAVTSPGGTTIAGVEALEKGGFRAATISAVTSATKRSMQL 264          
BLAST of NO02G00970 vs. NCBI_GenBank
Match: WP_076349134.1 (pyrroline-5-carboxylate reductase [Paludisphaera borealis])

HSP 1 Score: 268.1 bits (684), Expect = 3.500e-68
Identity = 139/267 (52.06%), Postives = 186/267 (69.66%), Query Frame = 0
Query:   38 PKLTLGFLGGGMMASALIKGLVKAEVLPNFAIFVSDPYKPSRDKLVAEVGVTGCDTNIEVAEHAQVIILAVKPDVVPQVLRELSQRVTPRHLIISIAAGATLQLLQHQLPDRSRVVRVMPNTPCLVGQSAAAFAMGDNCLPEDAALVKKIFSAVGAAFEVKEKDLNAVTGLSGSGPAYIFLLIEALADGGVRAGLPRNIAMQLATQTVKGAATMVQLTGEHPGVLKDQVASPGGTTIAGIEALEKGSFRATVMSAVTASADRAKQLA 305
            P    GF+G G MASALI+G+++A V     +  SDP   +RD+L  E G+T   +N  + E + V++LAVKP  + QVLREL+  VTP HL++SIAAG ++  +   L    RVVRVMPNTP L+G+ A+A+A+G N   +DAA+V+    +VG A  V E  L+AVTGLSGSGPA+++++IEAL+DGGVRAGLPR++A  LA QTV G+A MV  T  HPG LKDQV SPGGTTIAG+ ALE+   R  ++ AV A+A R+ +LA
Sbjct:   17 PSRRWGFIGAGKMASALIRGMIRAGVTTADLVSTSDPLASTRDELARETGITAAASNFAMVERSDVLVLAVKPQSMGQVLRELAAVVTPDHLVVSIAAGVSIATISDALGAGRRVVRVMPNTPALLGEGASAYALGPNATSDDAAVVQAFLDSVGRAVRVPESQLDAVTGLSGSGPAFVYMIIEALSDGGVRAGLPRDVATMLAAQTVLGSARMVLETNLHPGALKDQVTSPGGTTIAGLHALERAGVRGALIDAVQAAAHRSAELA 283          
The following BLAST results are available for this feature:
BLAST of NO02G00970 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM30577.13.400e-12776.16pyrroline-5-carboxylate reductase [Nannochloropsis... [more]
GAQ80892.12.100e-7357.89pyrroline-5-carboxylate reductase [Klebsormidium n... [more]
CBJ27579.14.800e-7358.05delta-1-pyrroline-5-carboxylate reductase [Ectocar... [more]
WP_007416296.12.000e-7154.68pyrroline-5-carboxylate reductase [Pedosphaera par... [more]
WP_088259042.11.000e-7054.89pyrroline-5-carboxylate reductase [Fimbriiglobus r... [more]
WP_002647263.18.400e-7054.92pyrroline-5-carboxylate reductase [Gimesia maris] ... [more]
XP_011401905.19.300e-6953.79Pyrroline-5-carboxylate reductase [Auxenochlorella... [more]
XP_004342330.11.600e-6855.43pyrroline5-carboxylate reductase [Acanthamoeba cas... [more]
EJK49118.13.500e-6857.95hypothetical protein THAOC_32036 [Thalassiosira oc... [more]
WP_076349134.13.500e-6852.06pyrroline-5-carboxylate reductase [Paludisphaera b... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL016nonsL016Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR032ncniR032Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR000ngnoR000Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK006700NSK006700Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO02G00970.1NO02G00970.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|573749gene_674Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100033g35gene108Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO02G00970.1NO02G00970.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO02G00970 ID=NO02G00970|Name=NO02G00970|organism=Nannochloropsis oceanica|type=gene|length=1465bp
ATGTCTGAGCAACCTGCCCGCATCCCGCCCGCCGCCATCGCCTCCACGCC
GCAGCATCCGCAGCATGCTCTTTCCCGTCCGGGCACACACAAAGCCGGGG
AAGGGGAGAGGCCGAAGTTAACCTTGGGCTTCCTGGGAGGCGGCATGATG
GCCTCGGCGCTTATCAAAGGTCTGGTGAAGGCAGAGGTCTTGCCTAATTT
TGCCATTTTTGTCAGCGACCCGTACAAGCCTTCGCGGGATAAGCTGGTAG
CGGAGGTGGGGGTAACCGGGTGTGATACCAACATCGAAGTAGCCGAGgta
ggtcgaggtgggggaaggacggaaggacggaaggacggaaggacggaatg
agggacggatggaggagagagaagaagttgcaacccggccgctcacacga
gcccattggcgtcctgttatttaaacctaacctttcatacatctatgatc
tgaataaacagCACGCTCAAGTGATCATCTTGGCAGTCAAGCCTGACGTA
GTCCCCCAAGTTTTGCGGGAACTCTCCCAGCGCGTCACTCCGCGCCACCT
GATCATCTCCATTGCTGCCGGCGCTACGTTGCAGCTCCTTCAACACgtat
gtagacaagtcgtctcgttatatacgtctttgctgtagagaaattcacct
ttggaaaagggtgatgagtgcgaggactccaactgaattgaatgcctccc
tcccccccttccttgcttccttttcgccgctcttcgctcccctccctttt
acagCAACTTCCAGACCGAAGCCGCGTTGTGCGCGTCATGCCCAACACAC
CCTGCTTGGTGGGACAATCGGCGGCTGCCTTCGCGATGGGTGATAATTGC
TTGCCTGAAGACGCGGCGCTTGTGAAAAAGATTTTTTCGGCTGTGGGTGC
AGCGTTCGAAGTTAAGGAGAAAGATTTGAACGgtaccaataagtcgatgg
gtggatgggtgggaggggagaaaagatgacgagtaaaggtggatattacg
gatatggcatttaattcaggagggcgctgtatgtatgactgctgacatgc
gtactgaatcgaagcatctcaaccccggtcctctctccttcccttccttc
ctctccgtacccttacagCCGTCACGGGTCTGAGCGGCAGTGGCCCCGCG
TATATCTTCCTCCTCATCGAAGCTCTCGCCGATGGGGGGGTCCGCGCCGG
CCTTCCGCGAAATATTGCCATGCAGCTGGCGACGCAAACCGTCAAGGGGG
CTGCCACCATGGTGCAGCTAACGGGGGAACACCCCGGGGTGCTCAAGGAC
CAGGTAGCTAGCCCGGGAGGGACGACCATCGCGGGTATCGAGGCCTTAGA
GAAGGGGTCGTTTCGCGCGACTGTCATGTCGGCCGTGACAGCGTCGGCGG
ATAGGGCGAAGCAGCTTGCAGAGCAGTCTAAACCGACCCCGAACCCGCGC
CCGCCCATGACGTAA
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protein sequence of NO02G00970.1

>NO02G00970.1-protein ID=NO02G00970.1-protein|Name=NO02G00970.1|organism=Nannochloropsis oceanica|type=polypeptide|length=319bp
MSEQPARIPPAAIASTPQHPQHALSRPGTHKAGEGERPKLTLGFLGGGMM
ASALIKGLVKAEVLPNFAIFVSDPYKPSRDKLVAEVGVTGCDTNIEVAEH
AQVIILAVKPDVVPQVLRELSQRVTPRHLIISIAAGATLQLLQHQLPDRS
RVVRVMPNTPCLVGQSAAAFAMGDNCLPEDAALVKKIFSAVGAAFEVKEK
DLNAVTGLSGSGPAYIFLLIEALADGGVRAGLPRNIAMQLATQTVKGAAT
MVQLTGEHPGVLKDQVASPGGTTIAGIEALEKGSFRATVMSAVTASADRA
KQLAEQSKPTPNPRPPMT*
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Synonyms
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