NO02G00970, NO02G00970 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO02G00970 vs. NCBI_GenBank
Match: EWM30577.1 (pyrroline-5-carboxylate reductase [Nannochloropsis gaditana]) HSP 1 Score: 464.2 bits (1193), Expect = 3.400e-127 Identity = 246/323 (76.16%), Postives = 275/323 (85.14%), Query Frame = 0 Query: 1 MSEQPARIPPA-----AIASTPQHPQHALSRP----GTHKAGEGERPKLTLGFLGGGMMASALIKGLVKAEVLPNFAIFVSDPYKPSRDKLVAEVGVTGCDTNIEVAEHAQVIILAVKPDVVPQVLRELSQRVTPRHLIISIAAGATLQLLQHQLPDRSRVVRVMPNTPCLVGQSAAAFAMGDNCLPEDAALVKKIFSAVGAAFEVKEKDLNAVTGLSGSGPAYIFLLIEALADGGVRAGLPRNIAMQLATQTVKGAATMVQLTGEHPGVLKDQVASPGGTTIAGIEALEKGSFRATVMSAVTASADRAKQLAEQSKPTPNPR 315 MSE P R P+ HPQHA P G K+GEGE+ K T+GF+GGGMMASALI+GLVKA V+PNFAI VSDPYKP RDKL AEVGV D NI+V EHAQVI+LAVKPD++PQVLRELSQRVT HLIISIAAGATLQL++HQLPD++RVVRVMPNTPCLVG+ AAAFA+G +CLPEDA LVK+IFSAVGAAFEVKEKDLNAVTGLSGSGPAY+F++IEA+ADGGVRAGLPRN+AMQLA QTVKGAATMVQLTGEHPGVLKDQVASPGGTTI GIEALEKG R+TV+ AV A+A+R+KQLAE SKPTPNPR Sbjct: 1 MSEAPTRQAPSXXXXXXXXXXXXHPQHAKPGPLRPAGGAKSGEGEK-KFTVGFIGGGMMASALIRGLVKAGVVPNFAISVSDPYKPMRDKLAAEVGVIAYDDNIQVIEHAQVIVLAVKPDIIPQVLRELSQRVTRHHLIISIAAGATLQLMEHQLPDQTRVVRVMPNTPCLVGECAAAFALGGSCLPEDAVLVKRIFSAVGAAFEVKEKDLNAVTGLSGSGPAYVFMMIEAMADGGVRAGLPRNVAMQLAAQTVKGAATMVQLTGEHPGVLKDQVASPGGTTITGIEALEKGGLRSTVIGAVVAAAERSKQLAESSKPTPNPR 322
BLAST of NO02G00970 vs. NCBI_GenBank
Match: GAQ80892.1 (pyrroline-5-carboxylate reductase [Klebsormidium nitens]) HSP 1 Score: 285.4 bits (729), Expect = 2.100e-73 Identity = 154/266 (57.89%), Postives = 196/266 (73.68%), Query Frame = 0 Query: 40 LTLGFLGGGMMASALIKGLVKAEVLPNFAIFVSDPYKPSRDKLVAEVGVTGCDTNIEVAEHAQVIILAVKPDVVPQVLRELSQRVTPRHLIISIAAGATLQLLQHQLPDRSRVVRVMPNTPCLVGQSAAAFAMGDNCLPEDAALVKKIFSAVGAAFEVKEKDLNAVTGLSGSGPAYIFLLIEALADGGVRAGLPRNIAMQLATQTVKGAATMVQLTGEHPGVLKDQVASPGGTTIAGIEALEKGSFRATVMSAVTASADRAKQLAE 306 + +GF+G G MA A+ +G KA V+P F +DP +R ++ + GVT +N+EVAE + VI LAVKP VV +VL EL +T RHLI+SIAAG TL+ LQ +R+VRVMPNTPCLVG++AAA ++G + D LV+K+FSAVG V E L+AVTGLSGSGPAYIF+ IEALADGGV AGLPR+IA+ LA QTVKGAA MV TG+HPGVLKD VASPGGTTIAG+ LEKG R+T+++AV A+A R+K+L++ Sbjct: 121 VNVGFIGAGQMAEAMARGFSKAGVVPASQQFATDP-SEARREVFSSFGVTALQSNVEVAEKSDVIFLAVKPYVVKKVLEELQTTLTERHLIVSIAAGVTLEQLQAAAGKGARIVRVMPNTPCLVGETAAALSLGKHATEADGELVQKLFSAVGLVHVVPENLLDAVTGLSGSGPAYIFIAIEALADGGVAAGLPRDIALSLAAQTVKGAAEMVLQTGKHPGVLKDSVASPGGTTIAGLHELEKGGVRSTLINAVLAAAQRSKELSK 385
BLAST of NO02G00970 vs. NCBI_GenBank
Match: CBJ27579.1 (delta-1-pyrroline-5-carboxylate reductase [Ectocarpus siliculosus]) HSP 1 Score: 284.3 bits (726), Expect = 4.800e-73 Identity = 155/267 (58.05%), Postives = 194/267 (72.66%), Query Frame = 0 Query: 42 LGFLGGGMMASALIKGLVKAEVLPNFAIFVSDPYKPSRDKLVAEVGVTGCDTNIEVAEHAQVIILAVKPDVVPQVLRELSQRVTPRHLIISIAAGATLQLLQHQLPDRSRVVRVMPNTPCLVGQSAAAFAMGDNCLPEDAALVKKIFSAVGAAFEVKEKDLNAVTGLSGSGPAYIFLLIEALADGGVRAGLPRNIAMQLATQTVKGAATMVQLTGEHPGVLKDQVASPGGTTIAGIEALEKGSFRATVMSAVTASADRAKQLAEQSK 309 LGF+G GMM+SA+I G++ A+V I SD Y+PS D+L A GV TN EV A VI+LAVKPDV+P VL E+ Q +T L++SIAAG L L++ +P + RV+RVMPNTPCLV +SAAAF++G + ED LV+ + S+VG A EVKE L+AVTG+SGSGPAYIF+LIEALADGGVR GLPR A++LA QTVKGAATMV TG HPGVLKD V SPGGTTI +EALEK FRA +SAV A+ +++ ++ K Sbjct: 15 LGFIGAGMMSSAMINGIIAAKVTEPGNIIASDVYQPSLDRLSAS-GVRTSTTNKEVVTGADVIVLAVKPDVIPAVLTEIEQFLTDDSLVVSIAAGVPLSALENLVPGK-RVIRVMPNTPCLVSESAAAFSLGSHAKDEDRELVQSLLSSVGFACEVKESQLDAVTGVSGSGPAYIFVLIEALADGGVRMGLPRATALKLAAQTVKGAATMVLETGTHPGVLKDNVCSPGGTTICAVEALEKNGFRAAAISAVVAATNKSLEMRNTKK 279
BLAST of NO02G00970 vs. NCBI_GenBank
Match: WP_007416296.1 (pyrroline-5-carboxylate reductase [Pedosphaera parvula] >EEF59623.1 pyrroline-5-carboxylate reductase [Pedosphaera parvula Ellin514]) HSP 1 Score: 278.9 bits (712), Expect = 2.000e-71 Identity = 146/267 (54.68%), Postives = 188/267 (70.41%), Query Frame = 0 Query: 39 KLTLGFLGGGMMASALIKGLVKAEVLPNFAIFVSDPYKPSRDKLVAEVGVTGCDTNIEVAEHAQVIILAVKPDVVPQVLRELSQRVTPRHLIISIAAGATLQLLQHQLPDRSRVVRVMPNTPCLVGQSAAAFAMGDNCLPEDAALVKKIFSAVGAAFEVKEKDLNAVTGLSGSGPAYIFLLIEALADGGVRAGLPRNIAMQLATQTVKGAATMVQLTGEHPGVLKDQVASPGGTTIAGIEALEKGSFRATVMSAVTASADRAKQLAE 306 KLT+GFLG G M +AL KG ++A ++ I SDP + + EVG +N+EVA A V++LAVKPD V VL E+ + T HLIISIAAG L ++ LP SR +RVMPNTP +VGQSA A+A G + PED L +K+FSAVG AF+VKE L+AVTGLSGSGPAY++++IEAL+DGGV +GLPR+IA +LA QT+ G A MV TG HPG LKD V SPGGTTI G+ LEKG R T+M+AV A+ +++K+L + Sbjct: 4 KLTIGFLGAGKMGTALAKGFIQAGLVSAEQIIASDPIEAAGKSFAKEVGAKVTSSNVEVARFANVLLLAVKPDQVSGVLAEIRDQFTKDHLIISIAAGVPLAKIEAGLPANSRAIRVMPNTPAIVGQSATAYAFGKSTTPEDGQLAQKLFSAVGVAFQVKEALLDAVTGLSGSGPAYVYMIIEALSDGGVASGLPRDIATKLAAQTLLGGAKMVLETGMHPGALKDMVTSPGGTTIEGVHELEKGQLRGTLMNAVRAATEKSKKLGQ 270
BLAST of NO02G00970 vs. NCBI_GenBank
Match: WP_088259042.1 (pyrroline-5-carboxylate reductase [Fimbriiglobus ruber] >OWK35957.1 Pyrroline-5-carboxylate reductase [Fimbriiglobus ruber]) HSP 1 Score: 276.6 bits (706), Expect = 1.000e-70 Identity = 146/266 (54.89%), Postives = 183/266 (68.80%), Query Frame = 0 Query: 40 LTLGFLGGGMMASALIKGLVKAEVLPNFAIFVSDPYKPSRDKLVAEVGVTGCDTNIEVAEHAQVIILAVKPDVVPQVLRELSQRVTPRHLIISIAAGATLQLLQHQLPDRSRVVRVMPNTPCLVGQSAAAFAMGDNCLPEDAALVKKIFSAVGAAFEVKEKDLNAVTGLSGSGPAYIFLLIEALADGGVRAGLPRNIAMQLATQTVKGAATMVQLTGEHPGVLKDQVASPGGTTIAGIEALEKGSFRATVMSAVTASADRAKQLAE 306 L +GFLG G MA+AL G A +L SDPY +RDK + G+ N EV +V+ILAVKP + VL EL+ T RHL +SIAAG TL L L ++RV+RVMPNTPCL+G SA+ FA G PED ALV ++F AVG AF + E L+AVTGLSGSGPA+++++IEALADGGVR GLPR++A+ LA QTV G+A MV TG+HPG LKD VASPGGTTIAG+ ALE+G RA +M AV A+ RA++L + Sbjct: 5 LAIGFLGAGQMATALANGWTAAGLLDPARSLASDPYPAARDKFASATGIRAVAGNAEVVAGCEVVILAVKPQTMAAVLAELATVATDRHLFVSIAAGVTLGALSAGLGSKARVIRVMPNTPCLLGASASGFAAGPAATPEDVALVARLFGAVGKAFALPEHQLDAVTGLSGSGPAFVYVMIEALADGGVRVGLPRDVALALAAQTVLGSAKMVLETGQHPGALKDAVASPGGTTIAGLHALERGGVRAALMDAVEAATKRAQELGK 270
BLAST of NO02G00970 vs. NCBI_GenBank
Match: WP_002647263.1 (pyrroline-5-carboxylate reductase [Gimesia maris] >EDL58525.1 pyrroline-5-carboxylate reductase [Gimesia maris DSM 8797]) HSP 1 Score: 273.5 bits (698), Expect = 8.400e-70 Identity = 145/264 (54.92%), Postives = 183/264 (69.32%), Query Frame = 0 Query: 42 LGFLGGGMMASALIKGLVKAEVLPNFAIFVSDPYKPSRDKLVAEVGVTGCDTNIEVAEHAQVIILAVKPDVVPQVLRELSQRVTPRHLIISIAAGATLQLLQHQLPDRSRVVRVMPNTPCLVGQSAAAFAMGDNCLPEDAALVKKIFSAVGAAFEVKEKDLNAVTGLSGSGPAYIFLLIEALADGGVRAGLPRNIAMQLATQTVKGAATMVQLTGEHPGVLKDQVASPGGTTIAGIEALEKGSFRATVMSAVTASADRAKQLAE 306 +GF+G G MA+AL GL+ + + SD Y+ + +K E G +N +V E A++IIL+VKP +P VL+E+ VT +HL+ISIAAG L L L + +R++RVMPNTPCLV Q A+AFA G EDA LV+ + S VG AFEV E L+AVTGLSGSGPAYI+ +IEAL+DGGVR GLPR IA QLA QTVKGAA MV TGEHPG LKD V SPGGTTIAGI ALE G R ++M+AV+A+ R+ +L + Sbjct: 9 VGFIGAGRMATALAGGLISSGFTTKDHVCASDTYEAASEKFAQETGARSVSSNQQVMEQAEIIILSVKPQQIPDVLQEIKSSVTSQHLLISIAAGCPLSLFLDTLGEFTRMIRVMPNTPCLVKQGASAFARGGQASTEDATLVESLLSTVGIAFEVPESQLDAVTGLSGSGPAYIYQVIEALSDGGVRVGLPRQIATQLAAQTVKGAAEMVLQTGEHPGTLKDAVTSPGGTTIAGIHALEAGGLRNSLMNAVSAATSRSIELGQ 272
BLAST of NO02G00970 vs. NCBI_GenBank
Match: XP_011401905.1 (Pyrroline-5-carboxylate reductase [Auxenochlorella protothecoides] >KFM28856.1 Pyrroline-5-carboxylate reductase [Auxenochlorella protothecoides]) HSP 1 Score: 270.0 bits (689), Expect = 9.300e-69 Identity = 142/264 (53.79%), Postives = 188/264 (71.21%), Query Frame = 0 Query: 42 LGFLGGGMMASALIKGLVKAEVLPNFAIFVSDPYKPSRDKLVAEVGVTGCDTNIEVAEHAQVIILAVKPDVVPQVLRELSQRVTPRHLIISIAAGATLQLLQHQLPDRSRVVRVMPNTPCLVGQSAAAFAMGDNCLPEDAALVKKIFSAVGAAFEVKEKDLNAVTGLSGSGPAYIFLLIEALADGGVRAGLPRNIAMQLATQTVKGAATMVQLTGEHPGVLKDQVASPGGTTIAGIEALEKGSFRATVMSAVTASADRAKQLAE 306 +GF+G G MA AL +G + ++ +F +DP + +R ++ G D NI VAE A+VI +AVKP VP VLRE+S ++T +HLI+SIAAG TL +L +++++RVMPNTPCLVG++AAA +G DA L++++F +VG F V EK L+AVTGLSGSGPAYIFL+IEAL+DGGVRAGLPR++A LA QTV G+A +V TG+HPG LKD V SP GTTIAG+ LEK RA M+AVTA++ RA +LAE Sbjct: 7 IGFIGAGQMAEALARGFINQNMVEAEHVFCTDPVE-ARKEVFRSFGTVPVDGNIAVAEAAEVIFIAVKPQYVPVVLREISPKLTEKHLIVSIAAGVTLAVLTEAAGPKAKIIRVMPNTPCLVGETAAAMCLGHGAGSADADLLQRLFESVGRIFRVDEKLLSAVTGLSGSGPAYIFLVIEALSDGGVRAGLPRDVAQALAAQTVLGSAKLVLETGKHPGALKDMVTSPAGTTIAGVHELEKAGIRAAFMNAVTAASARADELAE 269
BLAST of NO02G00970 vs. NCBI_GenBank
Match: XP_004342330.1 (pyrroline5-carboxylate reductase [Acanthamoeba castellanii str. Neff] >ELR20220.1 pyrroline5-carboxylate reductase [Acanthamoeba castellanii str. Neff]) HSP 1 Score: 269.2 bits (687), Expect = 1.600e-68 Identity = 148/267 (55.43%), Postives = 190/267 (71.16%), Query Frame = 0 Query: 42 LGFLGGGMMASALIKGLVKAEVLPNFAIFVSDPYKPSRDKLVAEVGVTGCDT--NIEVAEHAQVIILAVKPDVVPQVLRELSQRV-TPRHLIISIAAGATLQLLQHQLPDRSRVVRVMPNTPCLVGQSAAAFAMGDNCLPEDAALVKKIFSAVGAAFEVKEKDLNAVTGLSGSGPAYIFLLIEALADGGVRAGLPRNIAMQLATQTVKGAATMVQLTGEHPGVLKDQVASPGGTTIAGIEALEKGSFRATVMSAVTASADRAKQLAE 306 + FLG G MA+AL +G + A V I SD Y+P + + G + T N+E E++ V+IL+VKP V+ +L+E+ V + HLIISIAAG T+ + QL +RVVRVMPNTPCLVG++AAAF++G PED LV + S+VG EV E+ L+AVTGLSGSGPAY++ IEAL+DGGV AGLPR++A +LA QTV GAA MV TGEHPGVLKD+VASPGGTTIAGI ALE G RATVM+AV A+ +R+K+LA+ Sbjct: 6 IAFLGAGQMATALARGFIDANVTRPENIIASDAYEPQLPRFQKDTGGSTKTTKSNLEAVENSDVVILSVKPQVMSTLLKEIKDAVASSPHLIISIAAGITIDTITKQLGSDTRVVRVMPNTPCLVGKTAAAFSLGGKATPEDGKLVAHLLSSVGLGTEVPERLLDAVTGLSGSGPAYVYQFIEALSDGGVAAGLPRDVAAKLAAQTVLGAAQMVVQTGEHPGVLKDKVASPGGTTIAGIHALENGRLRATVMNAVLAATERSKELAK 272
BLAST of NO02G00970 vs. NCBI_GenBank
Match: EJK49118.1 (hypothetical protein THAOC_32036 [Thalassiosira oceanica]) HSP 1 Score: 268.1 bits (684), Expect = 3.500e-68 Identity = 153/264 (57.95%), Postives = 185/264 (70.08%), Query Frame = 0 Query: 41 TLGFLGGGMMASALIKGLVKAEVLPNFAIFVSDPYKPSRDKLVAEVGVTGCDTNIEVAEHAQ-VIILAVKPDVVPQVLRELSQRVTPRHLIISIAAGATLQLLQHQLPDRSRVVRVMPNTPCLVGQSAAAFAMGDNCLPEDAALVKKIFSAVGAAFEVKEKDLNAVTGLSGSGPAYIFLLIEALADGGVRAGLPRNIAMQLATQTVKGAATMVQLTGEHPGVLKDQVASPGGTTIAGIEALEKGSFRATVMSAVTASADRAKQL 304 TLGFLG G MASAL G+V + I SD +KP+R+K A+ G + N V E+++ I LAVKP+ V +++ + LIISIAAG TL+ L+ LP R RVVRVMPNTPCLVG+ AA FA+G +D LVK++ AVG A EV E LNA+TGLSGSGPAY+F IEAL+DGGVRAGLPRN+A QLA QTVKGAA MV TG+HPG LKD V SPGGTTIAG+EALEKG FRA +SAVT++ R+ QL Sbjct: 3 TLGFLGAGQMASALADGIVSNGLRKPNQIHCSDIWKPAREKAQAK-GYNAYELNSGVCENSEDAIFLAVKPNCVAAACKDVMESKDSGALIISIAAGVTLETLEDSLPGR-RVVRVMPNTPCLVGEQAAGFALGGLATDDDRRLVKELLDAVGVAMEVNEILLNAITGLSGSGPAYVFQFIEALSDGGVRAGLPRNVATQLAAQTVKGAAEMVLKTGKHPGELKDAVTSPGGTTIAGVEALEKGGFRAATISAVTSATKRSMQL 264
BLAST of NO02G00970 vs. NCBI_GenBank
Match: WP_076349134.1 (pyrroline-5-carboxylate reductase [Paludisphaera borealis]) HSP 1 Score: 268.1 bits (684), Expect = 3.500e-68 Identity = 139/267 (52.06%), Postives = 186/267 (69.66%), Query Frame = 0 Query: 38 PKLTLGFLGGGMMASALIKGLVKAEVLPNFAIFVSDPYKPSRDKLVAEVGVTGCDTNIEVAEHAQVIILAVKPDVVPQVLRELSQRVTPRHLIISIAAGATLQLLQHQLPDRSRVVRVMPNTPCLVGQSAAAFAMGDNCLPEDAALVKKIFSAVGAAFEVKEKDLNAVTGLSGSGPAYIFLLIEALADGGVRAGLPRNIAMQLATQTVKGAATMVQLTGEHPGVLKDQVASPGGTTIAGIEALEKGSFRATVMSAVTASADRAKQLA 305 P GF+G G MASALI+G+++A V + SDP +RD+L E G+T +N + E + V++LAVKP + QVLREL+ VTP HL++SIAAG ++ + L RVVRVMPNTP L+G+ A+A+A+G N +DAA+V+ +VG A V E L+AVTGLSGSGPA+++++IEAL+DGGVRAGLPR++A LA QTV G+A MV T HPG LKDQV SPGGTTIAG+ ALE+ R ++ AV A+A R+ +LA Sbjct: 17 PSRRWGFIGAGKMASALIRGMIRAGVTTADLVSTSDPLASTRDELARETGITAAASNFAMVERSDVLVLAVKPQSMGQVLRELAAVVTPDHLVVSIAAGVSIATISDALGAGRRVVRVMPNTPALLGEGASAYALGPNATSDDAAVVQAFLDSVGRAVRVPESQLDAVTGLSGSGPAFVYMIIEALSDGGVRAGLPRDVATMLAAQTVLGSARMVLETNLHPGALKDQVTSPGGTTIAGLHALERAGVRGALIDAVQAAAHRSAELA 283 The following BLAST results are available for this feature:
BLAST of NO02G00970 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO02G00970 ID=NO02G00970|Name=NO02G00970|organism=Nannochloropsis oceanica|type=gene|length=1465bpback to top protein sequence of NO02G00970.1 >NO02G00970.1-protein ID=NO02G00970.1-protein|Name=NO02G00970.1|organism=Nannochloropsis oceanica|type=polypeptide|length=319bpback to top Synonyms
Publications
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