|
|
Properties
| Property Name | Value |
|---|
| Description | Unknown protein |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| chr2 | genome | chr2:294826..299443 + |
Analyses
This gene is derived from or has results from the following analyses
Homology
BLAST of NO02G00940 vs. NCBI_GenBank
Match: EWM30556.1 (hypothetical protein Naga_100033g32 [Nannochloropsis gaditana]) HSP 1 Score: 303.9 bits (777), Expect = 1.200e-78 Identity = 240/455 (52.75%), Postives = 279/455 (61.32%), Query Frame = 0
Query: 238 YMRGNTGGSNPFAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLGMGGLGFGGQFIQGGGARGMESPMPLPPGGIPXXXXXXXXXMPPRPGCIPPYIPGRYPQASDWGAGRGEEGGKRPYGPGGQENDKRMRAEGKG-GWEGGVEVKKEKEPRPIQATPAELAAAMKLKATTGMGLEEGLTALRVNRFNPEEAVKWYIEASQQNRMEMALVHHASIESEKANDEYRKVESARQEQLMREGDVLGGGDFKDSTLVGGEGREGGSEAVGAFLRRFCCL-KAERFETEGMGDEGVARRRELVVKLLIKEKEAVRFYKHNAVAYMKALANRLDAAAA--MGGGKGGNDGKDVLPLSLLEEEAEALESALTKYPEGNVGGVPAQFLKYSSVGLDLDQDGLEVVSESGE--------XXXXXXXAVSDGKEGGRRRSTVRECIEVMDD 681
YMRG TGG NPFA XXXXXXXXXXXXXXXXXXXXX L + GL G F G + P PL G P MP P + P G+ ++ G+ Y +KR+RA+ KG G G EVKKE+E RPIQAT EL AA L+A TGMG+EEGLTALR N F+PE+AV WY+EASQQ MEMALVHHASIESE+ NDEYR+ E +QE+LM+EGDV+G F STL+ E GS AV AFLRR+C R + G + VARRRELVVKLLIKEKEAVRFYK A YMKALA RLD AA D LPL+ LE EA ALE+ALTKYPEGNVGGVP QFLKY+S D ++DGLEVV E G XXXXXX V++GKE G++R+ V ECIE+++D
Sbjct: 101 YMRGTTGGVNPFAGAXXXXXXXXXXXXXXXXXXXXXFNGSEREDLAQ---------LRVLGLSEMGTFSNRTGEPEGDKPFPLGGVGRP-------PDMPDGP---------KRPHNGHACPGKADKEGESEY-------EKRLRADEKGEGVAGTREVKKERERRPIQATARELEAARDLQAKTGMGIEEGLTALRANNFDPEKAVMWYVEASQQGGMEMALVHHASIESERLNDEYRRAEMRKQEELMKEGDVIGSAKFAASTLL---AEEDGSRAVHAFLRRYCSRGGGRRGRSRGHEEASVARRRELVVKLLIKEKEAVRFYKAAAHGYMKALAKRLDGAAGXXXXXXXXXEDEGGQLPLTCLEHEAMALENALTKYPEGNVGGVPVQFLKYASPASDFEEDGLEVVGEGGREEXXXXXXXXXXXXAGVAEGKE-GKKRTGVVECIEILED 519
The following BLAST results are available for this feature:
Relationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO02G00940 ID=NO02G00940|Name=NO02G00940|organism=Nannochloropsis oceanica|type=gene|length=4618bp
GTTGCCGTGCGGTATTGTTGCTTCTTTTAAATCTTCCCTTCGCGGCCAGG
GCGAAAGAAAAGTGGAGAGAAAAGACCCATTTTTTTCCATAGCCCTGCGG
CATAGCTCGACGCTGCTGTCACTACTGCTGCTGCTCCTGCTATCAACCAC
TGCTCCTGCTATCGACTACTTCAGTGCTACACGCATATGCTCTTTTACAG
AGGACAACGAGGACGTATCAAACACTCAATGTATAGACAAATTCGAGTGA
AACAGTAGGACCACACTGTACAAAAAGAAAGAAAGAAAGGGCACTAAGAT
TCCAAAATGGCTAACTAACCATACAATTTCTGGTCCAGGAGTATATACAC
ACATTGACACGCTTTGCACACTCAATGATCTCCCTCATTCACCGCATTCC
TTCAATCTCTATTCTTGTCCATCTCGCCCTTCCCTCCAACACGTGCCTGA
AACAGATAGGTCCTCATAAAATCCTTTTTCTCTTTCCGAGGAACAACCGG
AAGTCCCCACAACCCAAAATTCGCTCCTTCCTCTCCCACCGTCACCACCT
CCACGCCCTCAAACCCCAAATCAGCTACAGCCGTCTCAGGCACTTCCATC
GCAGAGGAAAACGTGCTGGTGAGCCACTTGTTGCTTGCTTGCTCTCGCAG
GGAGGTCAAAGTGAAGTCATTGATGTGATCCGCAAGCAAAATGCTCCCAG
GAGCGGACTCCGCTTGAATGGCCCGTAATAATGTCTGTGCCCGCGATGCT
TCAAAGTAGTAAAGAAAGCCTTCTAAGATCCAGATTGTTTTTTTGCGCGG
GTCAAAGCCTGCGGACTTTAGAGTATTTACCCATGCGACGTCATCAGAAA
AATCTGTGATCAATCGATGCATTCCCCGGGCGAGTAAGGGAAAGCGATCT
GTGACGCTTGCCAGGATTCGGCTCTTGTAGTCCAGGACGGGTTTCACGTC
AAGTTCAAAGATATGGCATTGCCGGAGTTCCTTGAGGCGGTGGCTACGGA
GGAAATGGGTGGGAGGGAGGAAGGAAGGAACCGAGAGAGGGAAAGTGAAT
AGACCGAGCGAAGGAAAGCGATCTGAGAAGTCCTTTCAGGGCTTCTCAGA
AGACGCGACCTGGAAATAGATAGTGAATGCGCCTGTCTTCGCGTGCCTTA
ATGTGTCGCCAAGCTGTACATTTCCCCGCGCCGTTCCGTCTTCCTTCCTT
CCCGTCATCCTCTTCCCCCCACACTCACCCGCGCGCGTCCATCCCTGCGC
CACAGAGCACCACTTGCGTCAGCTCTGGGTCTACGGTCAATGCCTTTGTT
ATTTTATTGTCCATCCAATGGGTGCGAATTGCCACAACAGGGTAGACGGC
ATTGGTAGCCTTGCTTGCACGCTCGCTTTCGATTATGTCAGCTCCTGCTA
GAATCGCGGCCAAAGGGTCCTGAACAACCTCCTCAAATAGGAAGCGGGCA
CCAGCGCAACGACGAGAGGACAAGGCCACGTCTTCATCGATGGGGCATGC
CATCTCTCTGTCTGTTGCCGTTGGGGGGCCAGGCGGAGGGGCAGGCTTGC
TGCTGCTACTGCTGCTGCTGCCGCTGGAGGCTTGGGCAGCAAGTATGTAG
GTCGTGCAGAGGAGAAAGGAAATCAGCAGCAAGGGCGGGCGGCGATAAGG
CATTCCGTCGTAGACCTTGCCCGCACTGCTTGTATTGCCTGCCTGTCTGT
GACATTGCATGCGAAGAAAGGGACGAGGGAGTTAAATTGAGGGTGTGTCA
AACCGAGACGCATCATGCATTTGGCGAAGCTTCCGAGTCCGCAAAAACGC
ACAGCTGCCCCTATGCCTTCCTTTGCCTTCCGTTCCCAAACCATCCCCAC
ATCCACTCCCACTTACACACTTGCACATAAACAGGCACCTCCAGTAGATT
TCTGTTCGCCGCCAGAAGGAGCAAAGTACGCGATCGCAAAGGCCTAGCAT
TAGCGAGCTAGCCTCCCCACCCCCTCTTCCTTCTTCCCCAAGGCTTCCTC
GTTTGGTATTCCTGCCAGGCTTACCGCCACAAGCCCCACTCGACCGCCAT
GGTCAACCATGCAGCCATCGCCTCCAGATTAAGAATCCCCCTCAGTGTTG
TCCAGAGACGATTTACAGAGCCCCAGATGATGAAGAAATTTAGCGTCAAG
GAGCTCAAGgtatgagtcctctcgttacatcaccttcatttcttctgtcg
taccagtgaatcatcctccttcctcctttccactttttattcccgctagc
gagagttgtctacagactccttcacacgtcctttgtccgcctccctccct
ccctctctccccccatctctttccccttctccctcttgagATCATCACCG
AGTACCTCCGCGACATCACGCAAGAAGGCCGCACCATTGTTAAGGGCACG
TCAGCACTCAGTAAAGCGGATTTACTGGAGAAAATAGAGCTTTTGGTTGC
TCTGAACTCAAACTCAACAGGGGATGGCAATAGCACCGGCAGCAACAACA
GCAACAGCAGCCACAGCACCGGTAGCTCCTCCTCTGTGTCGTCGTCATCC
GATCTGGATCTGGCGGCAGCAATTTCAGCCAGCGATGCGATGTCCCCTCC
CCTTCTTCCTCCCTCTCGACCACCAATTGAGTTTATTTGTATCGACGATT
CCGATGACGAAGAGAACAGCGCCTCTTGTCCTCCTCCCCGTCCACCTCAC
CCAGCAATACCATCACCAGCATTGGCAGTGCGACCATCAGCGTCAGAGGC
AGCAGCAGTTAGAACGTTATCTGTAGCAGCACGGGCACATCCCCTTTCTC
AATCTATTCCTGCCTCTCTCGCCGCTCCCCCCTCCTCCGCCGCCGCCTTC
CCCCGACTTGTCCCTCCTCAACCTACTCATCAACGCTCCAGCAGCAGCAA
CAACAGTAGTAGTTGTGCTGCTGCGGGTGGATTCGTCGCCTACATGCGAG
GCAACACCGGAGGAAGCAATCCCTTCGCTGGCGCTGCTGCGGCTGCAGCT
GCTGCAGCTTATCAACGTCAAGCTGGCAGTGGGAGTGGAGAAGGAGGAGG
AGGAGGGTGGGGAGGTGGAAGCAGTATCACATCGATGGAACAGGCGCAGT
TACGGGTGTTGGGGATGGGGGGTTTGGGTTTTGGCGGGCAATTTATCCAA
GGCGGAGGCGCGAGAGGCATGGAGAGTCCGATGCCGTTGCCACCTGGGGG
GATACCCGGTGGAGGCGGAGGAGGGATGGCGGGGATGCCTCCACGCCCTG
GTTGTATCCCGCCCTATATCCCGGGGCGATACCCTCAGGCATCTGACTGG
GGAGCGGGCAGGGGAGAAGAGGGCGGGAAGCGGCCATATGGGCCGGGCGG
GCAGGAGAATGACAAGCGTATGCGTGCGGAAGGGAAGGGAGGGTGGGAGG
GAGGAGTGGAAGTGAAGAAGGAGAAGGAGCCCCGCCCGATTCAGGCGACG
CCTGCTGAGCTTGCTGCTGCGATGAAATTGAAGGCAACCACGGGCATGGG
CCTGGAAGAGGGGCTGACGGCGTTGAGGGTGAATAGATTTAACCCGGAGG
AGGCAGTTAAGTGGTACATTGAGGCAAGTCAGCAGAATCGGATGGAGATG
GCTTTGGTGCATCACGCGAGCATTGAGAGTGAGAAGGCCAATGATGAGTA
CAGGAAGGTGGAGAGCGCGAGGCAGGAGCAGTTGATGCGGGAGGGGGATG
TGCTGGGAGGAGGTGATTTCAAGGACTCGACCTTGGTGGGGGGGGAAGGA
AGGGAGGGAGGAAGCGAAGCGGTGGGTGCGTTTTTGAGAAGGTTTTGTTG
CTTGAAGGCTGAGAGGTTTGAAACGGAGGGGATGGGGGACGAAGGGGTGG
CGCGCCGGAGGGAGCTGGTTGTGAAGCTGTTGATCAAGGAGAAGGAGGCG
GTAAGGTTCTACAAGCACAACGCTGTGGCTTATATGAAGGCGTTGGCGAA
TCGGTTGGATGCCGCAGCGGCGATGGGAGGTGGGAAGGGAGGGAACGACG
GGAAAGATGTGTTGCCGTTGTCGCTGCTTGAGGAGGAGGCGGAGGCGTTG
GAAAGCGCGTTGACAAAGTACCCGGAAGGAAACGTTGGGGGAGTCCCTGC
CCAGTTTTTGAAGTACTCGAGCGTGGGGCTTGACCTGGATCAGGATGGAT
TGGAGGTCGTGTCAGAGAGCGGGGAGGGAGGCGAAGGGGAAGAGGGGGCA
GTGTCGGACGGGAAGGAAGGTGGGAGAAGGAGGTCGACGGTGAGAGAGTG
TATAGAGGTGATGGATGATTAAAATGGTAGAACGAGGGAGGGAGGGAAAG
AGGGCGGGTGTGCACATGGGTTACGATGCAGATGAAGGCATCCAAAGAAA
CGCGGGATATTTATGGGAGGAGCTCGCCATTGAAAGTCGCCAAAAATGCA
GATCAAAATATAGCAAATGTATGTACAACATAGAGACAACGTGCACCAGA
CGACTGCGGTAGATTCCTCCTCCTTCCCTATTTCACCCCACTATTCACCA
TCAGAGCGGCAGTGTCAGAGAAGAGTAAAGGCAAAAATGACGGCTAGTGA
GCGAAAGAGTAGGTGACAATACACCCGAAGCACAACCAAAGCAGATTCCT
GAAACAAATTTCAACGGA back to topprotein sequence of NO02G00940.1 >NO02G00940.1-protein ID=NO02G00940.1-protein|Name=NO02G00940.1|organism=Nannochloropsis oceanica|type=polypeptide|length=681bp
MVNHAAIASRLRIPLSVVQRRFTEPQMMKKFSVKELKIITEYLRDITQEG
RTIVKGTSALSKADLLEKIELLVALNSNSTGDGNSTGSNNSNSSHSTGSS
SSVSSSSDLDLAAAISASDAMSPPLLPPSRPPIEFICIDDSDDEENSASC
PPPRPPHPAIPSPALAVRPSASEAAAVRTLSVAARAHPLSQSIPASLAAP
PSSAAAFPRLVPPQPTHQRSSSSNNSSSCAAAGGFVAYMRGNTGGSNPFA
GAAAAAAAAAYQRQAGSGSGEGGGGGWGGGSSITSMEQAQLRVLGMGGLG
FGGQFIQGGGARGMESPMPLPPGGIPGGGGGGMAGMPPRPGCIPPYIPGR
YPQASDWGAGRGEEGGKRPYGPGGQENDKRMRAEGKGGWEGGVEVKKEKE
PRPIQATPAELAAAMKLKATTGMGLEEGLTALRVNRFNPEEAVKWYIEAS
QQNRMEMALVHHASIESEKANDEYRKVESARQEQLMREGDVLGGGDFKDS
TLVGGEGREGGSEAVGAFLRRFCCLKAERFETEGMGDEGVARRRELVVKL
LIKEKEAVRFYKHNAVAYMKALANRLDAAAAMGGGKGGNDGKDVLPLSLL
EEEAEALESALTKYPEGNVGGVPAQFLKYSSVGLDLDQDGLEVVSESGEG
GEGEEGAVSDGKEGGRRRSTVRECIEVMDD* back to top
|