NO02G00920, NO02G00920 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO02G00920 vs. NCBI_GenBank
Match: EWM30555.1 (Protein of unknown function DUF1754, eukaryotic [Nannochloropsis gaditana]) HSP 1 Score: 115.2 bits (287), Expect = 1.400e-22 Identity = 93/121 (76.86%), Postives = 99/121 (81.82%), Query Frame = 0 Query: 1 MPIGGALKLKGMSINKD---XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGEEVPLALEKDDGLTETQRRHIARQKEREKNNIKNMVSKSHRERIDEFNQYLSVLTEHNDIPRVSAAGNG 119 MP+GGALKLKG+ KD XXXXXXXXXXXXXXXXXXXXXXXXX + EKDDGLTETQRRHIA+ KERE+ NIK +VSKSHRERIDEFNQYLSVLTEHNDIPRVSAAGNG Sbjct: 1 MPVGGALKLKGLP-TKDXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGNESISDTSSFPSEKDDGLTETQRRHIAKLKERERQNIKKLVSKSHRERIDEFNQYLSVLTEHNDIPRVSAAGNG 120
BLAST of NO02G00920 vs. NCBI_GenBank
Match: XP_024572879.1 (Conserved alpha-helical protein [Plasmopara halstedii] >CEG36510.1 Conserved alpha-helical protein [Plasmopara halstedii]) HSP 1 Score: 74.3 bits (181), Expect = 2.800e-10 Identity = 35/59 (59.32%), Postives = 46/59 (77.97%), Query Frame = 0 Query: 60 DGLTETQRRHIARQKEREKNNIKNMVSKSHRERIDEFNQYLSVLTEHNDIPRVSAAGNG 119 D +T QRRH +K+RE+ I+ M SK++RERI+E NQ+L LTEH+D+PRVSAAGNG Sbjct: 54 DDMTPAQRRHAEHKKKREQEEIEKMASKTYRERIEELNQHLGSLTEHHDVPRVSAAGNG 112
BLAST of NO02G00920 vs. NCBI_GenBank
Match: CBJ30524.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 70.9 bits (172), Expect = 3.100e-9 Identity = 37/62 (59.68%), Postives = 44/62 (70.97%), Query Frame = 0 Query: 57 EKDDGLTETQRRHIARQKEREKNNIKNMVSKSHRERIDEFNQYLSVLTEHNDIPRVSAAGNG 119 E DD LT QRR +Q ERE I+ MV ++HRERI+ FN L+ +TEHNDIPR SAAGNG Sbjct: 116 EVDDMLTPAQRRFRKKQLEREGKKIRGMVEQTHRERIENFNALLASMTEHNDIPRCSAAGNG 177
BLAST of NO02G00920 vs. NCBI_GenBank
Match: CCA22448.1 (conserved hypothetical protein [Albugo laibachii Nc14]) HSP 1 Score: 70.5 bits (171), Expect = 4.000e-9 Identity = 33/58 (56.90%), Postives = 45/58 (77.59%), Query Frame = 0 Query: 61 GLTETQRRHIARQKEREKNNIKNMVSKSHRERIDEFNQYLSVLTEHNDIPRVSAAGNG 119 G+T+ Q +H Q++RE + I + SK++R+R+DE NQYL LTEH+DIPRVSAAGNG Sbjct: 71 GMTQAQIKHEEIQRKRENDEINKIASKTYRQRVDELNQYLGSLTEHHDIPRVSAAGNG 128
BLAST of NO02G00920 vs. NCBI_GenBank
Match: GBG28874.1 (Protein FAM32A [Aurantiochytrium sp. FCC1311]) HSP 1 Score: 70.5 bits (171), Expect = 4.000e-9 Identity = 35/58 (60.34%), Postives = 43/58 (74.14%), Query Frame = 0 Query: 61 GLTETQRRHIARQKEREKNNIKNMVSKSHRERIDEFNQYLSVLTEHNDIPRVSAAGNG 119 GLT QRR +Q+ERE IK M +HRER+D FN+ LS L+EH+DIP+VSAAGNG Sbjct: 306 GLTPAQRRFELKQREREAERIKEMTRMTHRERVDAFNEKLSKLSEHHDIPKVSAAGNG 363
BLAST of NO02G00920 vs. NCBI_GenBank
Match: XP_008880462.1 (hypothetical protein H310_14388 [Aphanomyces invadans] >ETV90897.1 hypothetical protein H310_14388 [Aphanomyces invadans]) HSP 1 Score: 68.6 bits (166), Expect = 1.500e-8 Identity = 30/58 (51.72%), Postives = 47/58 (81.03%), Query Frame = 0 Query: 61 GLTETQRRHIARQKEREKNNIKNMVSKSHRERIDEFNQYLSVLTEHNDIPRVSAAGNG 119 G+T Q++H+ + +RE+ +IK SK++RER+DE+++YL L+EH+D+PRVSAAGNG Sbjct: 58 GMTAAQQKHLKFKAKREEEDIKKQASKTYRERVDEYSKYLGNLSEHHDVPRVSAAGNG 115
BLAST of NO02G00920 vs. NCBI_GenBank
Match: CCI39645.1 (unnamed protein product [Albugo candida]) HSP 1 Score: 67.4 bits (163), Expect = 3.400e-8 Identity = 31/57 (54.39%), Postives = 43/57 (75.44%), Query Frame = 0 Query: 62 LTETQRRHIARQKEREKNNIKNMVSKSHRERIDEFNQYLSVLTEHNDIPRVSAAGNG 119 +T+ QR+H +++RE I + SK++R+R+DE N YL LTEH+DIPRVSAAGNG Sbjct: 55 MTQAQRKHEEIRRKRENEEINKIASKTYRQRVDELNHYLGSLTEHHDIPRVSAAGNG 111
BLAST of NO02G00920 vs. NCBI_GenBank
Match: XP_012202653.1 (hypothetical protein SPRG_07911 [Saprolegnia parasitica CBS 223.65] >KDO26508.1 hypothetical protein SPRG_07911 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 67.4 bits (163), Expect = 3.400e-8 Identity = 29/58 (50.00%), Postives = 46/58 (79.31%), Query Frame = 0 Query: 61 GLTETQRRHIARQKEREKNNIKNMVSKSHRERIDEFNQYLSVLTEHNDIPRVSAAGNG 119 G+T+ Q++H + +RE+ +I+ SK++RER++E++ YL LTEH+D+PRVSAAGNG Sbjct: 67 GMTDAQKKHAKFKSKREEEDIRKQASKTYRERVEEYSTYLGNLTEHHDVPRVSAAGNG 124
BLAST of NO02G00920 vs. NCBI_GenBank
Match: XP_009843866.1 (hypothetical protein H257_16944 [Aphanomyces astaci] >ETV66638.1 hypothetical protein H257_16944 [Aphanomyces astaci]) HSP 1 Score: 67.0 bits (162), Expect = 4.500e-8 Identity = 33/67 (49.25%), Postives = 49/67 (73.13%), Query Frame = 0 Query: 52 VPLALEKDDGLTETQRRHIARQKEREKNNIKNMVSKSHRERIDEFNQYLSVLTEHNDIPRVSAAGNG 119 VP+A +T Q++H + +RE+ +IK SK++RER+DE++QYL L+EH+D+PRVSAAGNG Sbjct: 53 VPIA-----AMTPAQKKHQKFKAKREEEDIKKQASKTYRERVDEYSQYLGNLSEHHDVPRVSAAGNG 114
BLAST of NO02G00920 vs. NCBI_GenBank
Match: XP_008613491.1 (hypothetical protein SDRG_09343 [Saprolegnia diclina VS20] >EQC32805.1 hypothetical protein SDRG_09343 [Saprolegnia diclina VS20]) HSP 1 Score: 66.2 bits (160), Expect = 7.600e-8 Identity = 29/57 (50.88%), Postives = 45/57 (78.95%), Query Frame = 0 Query: 62 LTETQRRHIARQKEREKNNIKNMVSKSHRERIDEFNQYLSVLTEHNDIPRVSAAGNG 119 +TE Q++H + +RE+ +I+ SK++RER++E++ YL LTEH+D+PRVSAAGNG Sbjct: 62 MTEAQKKHAKFKSKREEEDIRKQASKTYRERVEEYSTYLGNLTEHHDVPRVSAAGNG 118 The following BLAST results are available for this feature:
BLAST of NO02G00920 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 13
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO02G00920 ID=NO02G00920|Name=NO02G00920|organism=Nannochloropsis oceanica|type=gene|length=876bpback to top protein sequence of NO02G00920.1 >NO02G00920.1-protein ID=NO02G00920.1-protein|Name=NO02G00920.1|organism=Nannochloropsis oceanica|type=polypeptide|length=119bpback to top Synonyms
Publications
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