NO02G00890, NO02G00890 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO02G00890 vs. NCBI_GenBank
Match: EWM30591.1 (Protein phosphatase 2C, manganese/magnesium aspartate binding site [Nannochloropsis gaditana]) HSP 1 Score: 419.9 bits (1078), Expect = 1.100e-113 Identity = 216/260 (83.08%), Postives = 232/260 (89.23%), Query Frame = 0 Query: 216 PYTTSVVAFKGQRSYMEDDFFISKDGSFSGVYDGHGGAAVSKYLRQNLNAQFLTALPDEDTTKLSDEVVAEALTQAFRVVDDAVLKVRHWSYMGSTAVAVVIHA------QGQGEGQPA---KRTLISANVGDSRAVLSRRGKAMDLTEDHKPNKPSELERVKALGGTVRWYGLLEQDGAPMEGMGVYRINGNLAVARAFGDRSERPFVSSEVEVKMVPVEDGDEFVILATDGLWDVMTSEDAVAFVHSVMSASVGALTE 467 PYTTSVVAFKGQRSYMEDDFFISKDGSF+GVYDGHGGAAVSKYLRQNLNAQFL ALPD D +L E V EAL AFRVVD+AV+KVRHW+YMGSTAV VVIHA +G EG A KRTLI+ANVGDSRAVLSRRG+A+DLT+DHKPNKPSELERVKALGGTVRWYGLLEQDG+PMEGMGVYRINGNLAVARAFGDRSERPFVSSE E+K + VE+GDEFVILATDGLWDVM+SE+AV FVHSVMSASVGALTE Sbjct: 185 PYTTSVVAFKGQRSYMEDDFFISKDGSFAGVYDGHGGAAVSKYLRQNLNAQFLAALPDADMRRLGQEKVTEALATAFRVVDEAVVKVRHWAYMGSTAVVVVIHAEEAKAKEGVEEGGRAGALKRTLIAANVGDSRAVLSRRGQAVDLTDDHKPNKPSELERVKALGGTVRWYGLLEQDGSPMEGMGVYRINGNLAVARAFGDRSERPFVSSEAEIKQLAVEEGDEFVILATDGLWDVMSSEEAVNFVHSVMSASVGALTE 444
BLAST of NO02G00890 vs. NCBI_GenBank
Match: CBN74003.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 247.7 bits (631), Expect = 7.600e-62 Identity = 135/253 (53.36%), Postives = 172/253 (67.98%), Query Frame = 0 Query: 212 IIGGPYTTSVVAFKGQRSYMEDDFFISKDGSFSGVYDGHGGAAVSKYLRQNLNAQFLTALPDEDTTKLSDEVVAEALTQAFRVVDDAVLKVRHWSYMGSTAVAVVIHAQGQGEGQPAKRTLISANVGDSRAVLSRRGKAMDLTEDHKPNKPSELERVKALGGTVRWYGLLEQDGAPMEGMGVYRINGNLAVARAFGDRSERPFVSSEVEVKMVPVE-DGDEFVILATDGLWDVMTSEDAVAFVHSVMSASVGA 464 + G P TSV + KG R MED+FF+S DGSFS VYDGHGGA VS+YLR+NL + LP D E V EAL AF+ DD V+ + GS AV+V IH +G K ++IS N+GDSRAVLSR GKA+DLTEDHKPN P E+ER+ G V W G G +EG GVYRING+LAVARA GD RP++S+EVE+K + ++ + D+FVILA+DGLWDVM+SE+AV +VH+VM ++G+ Sbjct: 34 LAGRPLFTSVASTKGHRPRMEDEFFLSSDGSFSAVYDGHGGANVSEYLRRNLYKHVMDHLPPGDDV-YGLETVQEALRSAFKCADDYVITQTPYGNEGSCAVSVTIHCDREG-----KVSIISCNLGDSRAVLSRGGKALDLTEDHKPNAPREMERIYRHDGMVTWEGFECSRGLQIEGTGVYRINGSLAVARAIGDIDYRPWLSAEVEIKTIDLKRETDQFVILASDGLWDVMSSEEAVQYVHAVMGGAMGS 280
BLAST of NO02G00890 vs. NCBI_GenBank
Match: GBG28784.1 (Protein phosphatase 1A [Aurantiochytrium sp. FCC1311]) HSP 1 Score: 227.3 bits (578), Expect = 1.100e-55 Identity = 132/245 (53.88%), Postives = 161/245 (65.71%), Query Frame = 0 Query: 231 MEDDFFISKDGSFSGVYDGHGGAAVSKYLRQNLNAQFLTALPDEDTTKLSDEVVAE----------ALTQAFRVVDDAVLKVRHWSYMGSTAVAVVIHAQGQGEGQPAKRTLISANVGDSRAVLSRRGKAMDLTEDHKPNKPSELERVKALGGTVRWYGLLEQDGAPMEGMGVYRINGNLAVARAFGDRSERPFVSSEVE-VKMVPVEDGDEFVILATDGLWDVMTSEDAVAFVHSVMSASVGAL 465 MED++FIS D SF GV+DGHGGA VSKY+R++L + P E DE VAE AL QAF V +L+ + GSTAV V++ G+ E L S N+GDSRAVL R G+A+DLTEDHKPN P E R++ LGG VRWYG L D P++GMG YRINGNLAV+RAFGDR E P+VS E + V+ DGD F+ILA+DGLWDVMTS++AV FV VM+ SVGAL Sbjct: 1 MEDEYFISPDESFFGVFDGHGGAKVSKYVRRHLYDKLQAWNPGE----TKDEGVAEKGNAGSWPEAALRQAFAEVSRGILENNKFDMQGSTAVTVLL---GRDE-------LWSTNLGDSRAVLCRDGEAVDLTEDHKPNSPEEKSRIENLGGNVRWYGYLGPDRQPVQGMGAYRINGNLAVSRAFGDRLETPYVSDEPDVVRFDRDHDGDRFIILASDGLWDVMTSQEAVKFVTQVMTGSVGAL 231
BLAST of NO02G00890 vs. NCBI_GenBank
Match: XP_009517599.1 (hypothetical protein PHYSODRAFT_538348 [Phytophthora sojae] >EGZ30324.1 hypothetical protein PHYSODRAFT_538348 [Phytophthora sojae]) HSP 1 Score: 218.8 bits (556), Expect = 3.800e-53 Identity = 118/263 (44.87%), Postives = 153/263 (58.17%), Query Frame = 0 Query: 215 GPYTTSVVAFKGQRSYMEDDFFISKDGSFSGVYDGHGGAAVSKYLRQNLNAQFLTALPDEDTTKLSD--------------EVVAEALTQAFRVVDDAVLKVRHWSYMGSTAVAVVIHAQGQGEGQPAKRTLISANVGDSRAVLSRRGKAMDLTEDHKPNKPSELERVKALGGTVRWYGLLEQDGAPMEGMGVYRINGNLAVARAFGDRSERPFVSSEVEVKMVPVE-DGDEFVILATDGLWDVMTSEDAVAFVHSVMSASVG 463 G S A +G R+YMED ++S F+ VYDGHGG+AVS+YLR L + L D L++ + VA L +A +D V+ W + GSTAV V++ L S NVGDSRAVL R G A+DLT DHKPN P E R+++LGG V+WYG ++ G P+E G YR+NGNLAVARA GDR RPFV E E++ +E D DEF+++A+DGLWDV TS + V FV VMS +G Sbjct: 143 GKMVVSTAAVRGDRAYMEDTSYVSSCKRFAAVYDGHGGSAVSQYLRNQLFSMIAPELVQLDQEILAENKGEKSVMAKSSRRQKVATMLQEAVSKLDQEVIVKNEWKFQGSTAVGVLLFDD----------VLYSLNVGDSRAVLCRSGDAVDLTRDHKPNDPQERARIESLGGRVQWYGYVDAQGEPIEPYGAYRVNGNLAVARAIGDRDSRPFVIGEAEIRQYDLEYDKDEFIVIASDGLWDVFTSSEVVEFVQDVMSGELG 395
BLAST of NO02G00890 vs. NCBI_GenBank
Match: XP_002907240.1 (protein phosphatase, putative [Phytophthora infestans T30-4] >EEY63804.1 protein phosphatase, putative [Phytophthora infestans T30-4]) HSP 1 Score: 218.8 bits (556), Expect = 3.800e-53 Identity = 117/263 (44.49%), Postives = 153/263 (58.17%), Query Frame = 0 Query: 215 GPYTTSVVAFKGQRSYMEDDFFISKDGSFSGVYDGHGGAAVSKYLRQNLNAQFLTALPDEDTTKLSD--------------EVVAEALTQAFRVVDDAVLKVRHWSYMGSTAVAVVIHAQGQGEGQPAKRTLISANVGDSRAVLSRRGKAMDLTEDHKPNKPSELERVKALGGTVRWYGLLEQDGAPMEGMGVYRINGNLAVARAFGDRSERPFVSSEVEVKMVPVE-DGDEFVILATDGLWDVMTSEDAVAFVHSVMSASVG 463 G S A +G R+YMED ++S F+ VYDGHGGAAVS++LR L + L D L++ + VA+ L + +D V+ W + GSTAV V++ + L S NVGDSRAVL R G +DLT DHKPN P E R+++LGG V+WYG ++ G P+E G YR+NGNLAVARA GDR RPFV E E++ +E D DEF++LA+DGLWDV TS + V FV VMS +G Sbjct: 141 GKMVVSTAAVRGDRAYMEDTSYVSSCKRFAAVYDGHGGAAVSQFLRNQLFSMISPELAQLDLQILAENKEENNVAAKSSRRQKVADLLRDTVQKLDQEVIAKNEWKFQGSTAVGVLLF----------EDVLYSLNVGDSRAVLCRGGNTVDLTRDHKPNDPQERARIESLGGRVQWYGYVDAQGEPIEPYGAYRVNGNLAVARAIGDRDSRPFVIGEAEIRQYDIEYDKDEFIVLASDGLWDVFTSSEVVEFVQDVMSGELG 393
BLAST of NO02G00890 vs. NCBI_GenBank
Match: XP_024583902.1 (protein [Plasmopara halstedii] >CEG47533.1 protein [Plasmopara halstedii]) HSP 1 Score: 218.8 bits (556), Expect = 3.800e-53 Identity = 115/263 (43.73%), Postives = 153/263 (58.17%), Query Frame = 0 Query: 215 GPYTTSVVAFKGQRSYMEDDFFISKDGSFSGVYDGHGGAAVSKYLRQNLNAQFLTALPDEDTTKLSD--------------EVVAEALTQAFRVVDDAVLKVRHWSYMGSTAVAVVIHAQGQGEGQPAKRTLISANVGDSRAVLSRRGKAMDLTEDHKPNKPSELERVKALGGTVRWYGLLEQDGAPMEGMGVYRINGNLAVARAFGDRSERPFVSSEVEVKMVPVE-DGDEFVILATDGLWDVMTSEDAVAFVHSVMSASVG 463 G S A +G R YMED ++S F+ VYDGHGG+AVS+YLR L + L D L++ + +A L A +D V+ W + GSTAV V++ L S NVGDSRAVL R G A++LT DHKPN P E R+++LGG V+W+G ++ G P+E G YR+NGNLAVARA GDR RPFV+ E E++ +E D DEF+++A+DGLWDV TS + + FVH VMS +G Sbjct: 141 GKMVVSTAAVRGDRPYMEDTSYVSSCKRFAAVYDGHGGSAVSQYLRNQLYSMISPELSHLDQEILAENKEENNVKGKLSRRQKIATMLHDAIHKLDQDVIAKSEWKFQGSTAVGVLLFDD----------VLYSLNVGDSRAVLCRAGNAVELTRDHKPNDPQERARIESLGGRVQWFGYVDAQGEPIEPYGAYRVNGNLAVARAIGDRDSRPFVNGEAEIRQYDIEYDKDEFIVIASDGLWDVFTSSEVIEFVHDVMSGELG 393
BLAST of NO02G00890 vs. NCBI_GenBank
Match: XP_009843527.1 (hypothetical protein H257_16702 [Aphanomyces astaci] >ETV67010.1 hypothetical protein H257_16702 [Aphanomyces astaci]) HSP 1 Score: 218.0 bits (554), Expect = 6.500e-53 Identity = 117/249 (46.99%), Postives = 155/249 (62.25%), Query Frame = 0 Query: 216 PYTTSVVAFKGQRSYMEDDFFISKDGSFSGVYDGHGGAAVSKYLRQNLNAQFLTAL-PDEDTTKLSDEVVAEALTQAFRVVDDAVLKVRHWSYMGSTAVAVVIHAQGQGEGQPAKRTLISANVGDSRAVLSRRGKAMDLTEDHKPNKPSELERVKALGGTVRWYGLLEQDGAPMEGMGVYRINGNLAVARAFGDRSERPFVSSEVEVKMVPVEDGDEFVILATDGLWDVMTSEDAVAFVHSVMSASVGA 464 P S A +G R MED FI+ + F+ V+DGHGGA VS YL++ L + L P +DT L + + +L AFR VD A+LK R W GSTA AV++ + S NVGDSRAVL R G+A++LT DHKPN P E RV+ GG V W+GL + G P+ MG YRIN NLAVARA GD +RP+VS E+E+K + D+F+++A+DGLWDV TS + V FVH+V++ VG+ Sbjct: 92 PLLVSSSAVRGDRPTMEDALFIAPNQRFTAVFDGHGGANVSSYLKETLYDHIVANLGPHKDTWSLDE--IESSLRDAFRAVDAAILKRREWITQGSTATAVLL----------VDDLIWSMNVGDSRAVLCRHGRALNLTRDHKPNDPMERLRVEGAGGRVHWHGLRDPRGHPIADMGAYRINSNLAVARALGDGDQRPYVSGEMELKCFRRDPSDKFIVVASDGLWDVFTSAEVVTFVHNVLAGEVGS 328
BLAST of NO02G00890 vs. NCBI_GenBank
Match: XP_008896760.1 (hypothetical protein PPTG_05043 [Phytophthora parasitica INRA-310] >ETI34623.1 hypothetical protein F443_18912 [Phytophthora parasitica P1569] >ETN17173.1 hypothetical protein PPTG_05043 [Phytophthora parasitica INRA-310] >ETP04520.1 hypothetical protein F441_18725 [Phytophthora parasitica CJ01A1] >ETP32666.1 hypothetical protein F442_18695 [Phytophthora parasitica P10297] >KUG00918.1 protein phosphatase 2C 71 [Phytophthora nicotianae]) HSP 1 Score: 217.2 bits (552), Expect = 1.100e-52 Identity = 117/263 (44.49%), Postives = 151/263 (57.41%), Query Frame = 0 Query: 215 GPYTTSVVAFKGQRSYMEDDFFISKDGSFSGVYDGHGGAAVSKYLRQNLNAQFLTALPDEDTTKLSD--------------EVVAEALTQAFRVVDDAVLKVRHWSYMGSTAVAVVIHAQGQGEGQPAKRTLISANVGDSRAVLSRRGKAMDLTEDHKPNKPSELERVKALGGTVRWYGLLEQDGAPMEGMGVYRINGNLAVARAFGDRSERPFVSSEVEVKMVPVE-DGDEFVILATDGLWDVMTSEDAVAFVHSVMSASVG 463 G S A +G R+YMED ++S F+ VYDGHGG+AVS+YLR L + L D L++ + V L A R +D V+ W + GSTAV V++ L S NVGDSRAVL R G ++LT DHKPN P E R+++LGG V+WYG ++ G P+E G YR+NGNLAVARA GDR RPFV E E++ +E D DEF+++A+DGLWDV TS + V FV VMS VG Sbjct: 141 GNMVVSTAAVRGDRAYMEDTSYVSSCKRFAAVYDGHGGSAVSQYLRNQLFSMISPELAQLDQQILAENKEANNVAAKSSRRQKVEAVLRDAVRKLDQEVIAKNEWKFQGSTAVGVLLFDD----------VLYSLNVGDSRAVLCRGGNTVELTRDHKPNDPQERARIESLGGRVQWYGYVDAQGDPIEPYGAYRVNGNLAVARAIGDRDSRPFVIGEAEIRQYDIEYDKDEFIVIASDGLWDVFTSSEVVEFVQDVMSGEVG 393
BLAST of NO02G00890 vs. NCBI_GenBank
Match: ETK74965.1 (hypothetical protein L915_18344 [Phytophthora parasitica] >ETL28388.1 hypothetical protein L916_18249 [Phytophthora parasitica]) HSP 1 Score: 217.2 bits (552), Expect = 1.100e-52 Identity = 117/263 (44.49%), Postives = 151/263 (57.41%), Query Frame = 0 Query: 215 GPYTTSVVAFKGQRSYMEDDFFISKDGSFSGVYDGHGGAAVSKYLRQNLNAQFLTALPDEDTTKLSD--------------EVVAEALTQAFRVVDDAVLKVRHWSYMGSTAVAVVIHAQGQGEGQPAKRTLISANVGDSRAVLSRRGKAMDLTEDHKPNKPSELERVKALGGTVRWYGLLEQDGAPMEGMGVYRINGNLAVARAFGDRSERPFVSSEVEVKMVPVE-DGDEFVILATDGLWDVMTSEDAVAFVHSVMSASVG 463 G S A +G R+YMED ++S F+ VYDGHGG+AVS+YLR L + L D L++ + V L A R +D V+ W + GSTAV V++ L S NVGDSRAVL R G ++LT DHKPN P E R+++LGG V+WYG ++ G P+E G YR+NGNLAVARA GDR RPFV E E++ +E D DEF+++A+DGLWDV TS + V FV VMS VG Sbjct: 141 GNMVVSTAAVRGDRAYMEDTSYVSSCKRFAAVYDGHGGSAVSQYLRNQLFSMISPELAQLDQQILAENKEANNVAAKSSRRQKVEAVLRDAVRKLDQEVIAKNEWKFQGSTAVGVLLFDD----------VLYSLNVGDSRAVLCRGGNTVELTRDHKPNDPQERARIESLGGRVQWYGYVDAQGDPIEPYGAYRVNGNLAVARAIGDRDSRPFVIGEAEIRQYDIEYDKDEFIVIASDGLWDVFTSSEVVEFVQDVMSGEVG 393
BLAST of NO02G00890 vs. NCBI_GenBank
Match: ETL81650.1 (hypothetical protein L917_18069 [Phytophthora parasitica]) HSP 1 Score: 217.2 bits (552), Expect = 1.100e-52 Identity = 117/263 (44.49%), Postives = 151/263 (57.41%), Query Frame = 0 Query: 215 GPYTTSVVAFKGQRSYMEDDFFISKDGSFSGVYDGHGGAAVSKYLRQNLNAQFLTALPDEDTTKLSD--------------EVVAEALTQAFRVVDDAVLKVRHWSYMGSTAVAVVIHAQGQGEGQPAKRTLISANVGDSRAVLSRRGKAMDLTEDHKPNKPSELERVKALGGTVRWYGLLEQDGAPMEGMGVYRINGNLAVARAFGDRSERPFVSSEVEVKMVPVE-DGDEFVILATDGLWDVMTSEDAVAFVHSVMSASVG 463 G S A +G R+YMED ++S F+ VYDGHGG+AVS+YLR L + L D L++ + V L A R +D V+ W + GSTAV V++ L S NVGDSRAVL R G ++LT DHKPN P E R+++LGG V+WYG ++ G P+E G YR+NGNLAVARA GDR RPFV E E++ +E D DEF+++A+DGLWDV TS + V FV VMS VG Sbjct: 141 GNMVVSTAAVRGDRAYMEDTSYVSSCKRFAAVYDGHGGSAVSQYLRNQLFSMISPELAQLDQQILAENKEANNVAAKSSRRQKVEAVLRDAVRKLDQEVIAKNEWKFQGSTAVGVLLFDD----------VLYSLNVGDSRAVLCRGGNTVELTRDHKPNDPQERARIESLGGRVQWYGYVDAQGDPIEPYGAYRVNGNLAVARAIGDRDSRPFVIGEAEIRQYDIEYDKDEFIVIASDGLWDVFTSSEVVEFVQDVMSGEVG 393 The following BLAST results are available for this feature:
BLAST of NO02G00890 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO02G00890 ID=NO02G00890|Name=NO02G00890|organism=Nannochloropsis oceanica|type=gene|length=2743bpback to top protein sequence of NO02G00890.1 >NO02G00890.1-protein ID=NO02G00890.1-protein|Name=NO02G00890.1|organism=Nannochloropsis oceanica|type=polypeptide|length=490bpback to top Synonyms
Publications
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