NO02G00830, NO02G00830 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO02G00830 vs. NCBI_GenBank
Match: XP_005853552.1 (integral membrane mpv17 pmp22, partial [Nannochloropsis gaditana CCMP526] >EKU22811.1 integral membrane mpv17 pmp22, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 286.2 bits (731), Expect = 9.500e-74 Identity = 135/177 (76.27%), Postives = 158/177 (89.27%), Query Frame = 0 Query: 44 TLKGELKRLIGAYHNSLVSRPLATKAVTSALISALGDVLASSGRAGRGRNGKRTLGFLLFGGLITGPVCHYWYGFLERHVKTFHGAKNVAIKVLLDKLLFTPPFLALTLFLLRALETGRFGPAWQGMKHIYVPTLKTNLKVWTVAQAINFTYTPPAYRVLFGNVVALWWSFYLSRLG 221 ++K ELKRL+ AYH+ LV+RP+ TKA+TSA+ISALGD+LASSG+ GRGR+G+RTLGF LFGGL+TGP+CHYWYG LE+ V+ G KNVA+KVLLDKLLFTPPFLALTLFLLR LE+GR G AW+GMK +Y PTLKTNL+VWTVAQAINF+Y PAYRVLFGN+VALWWSFYLSRLG Sbjct: 49 SMKAELKRLLRAYHHCLVTRPVLTKALTSAVISALGDILASSGKGGRGRSGRRTLGFFLFGGLVTGPLCHYWYGLLEKKVRGLQGGKNVAMKVLLDKLLFTPPFLALTLFLLRLLESGRPGAAWRGMKQVYFPTLKTNLQVWTVAQAINFSYVSPAYRVLFGNLVALWWSFYLSRLG 225
BLAST of NO02G00830 vs. NCBI_GenBank
Match: EWM30595.1 (peroxisomal membrane protein 2 [Nannochloropsis gaditana]) HSP 1 Score: 286.2 bits (731), Expect = 9.500e-74 Identity = 135/177 (76.27%), Postives = 158/177 (89.27%), Query Frame = 0 Query: 44 TLKGELKRLIGAYHNSLVSRPLATKAVTSALISALGDVLASSGRAGRGRNGKRTLGFLLFGGLITGPVCHYWYGFLERHVKTFHGAKNVAIKVLLDKLLFTPPFLALTLFLLRALETGRFGPAWQGMKHIYVPTLKTNLKVWTVAQAINFTYTPPAYRVLFGNVVALWWSFYLSRLG 221 ++K ELKRL+ AYH+ LV+RP+ TKA+TSA+ISALGD+LASSG+ GRGR+G+RTLGF LFGGL+TGP+CHYWYG LE+ V+ G KNVA+KVLLDKLLFTPPFLALTLFLLR LE+GR G AW+GMK +Y PTLKTNL+VWTVAQAINF+Y PAYRVLFGN+VALWWSFYLSRLG Sbjct: 49 SMKAELKRLLRAYHHCLVTRPVLTKALTSAVISALGDILASSGKGGRGRSGRRTLGFFLFGGLVTGPLCHYWYGLLEKKVRGLQGGKNVAMKVLLDKLLFTPPFLALTLFLLRLLESGRPGAAWRGMKQVYFPTLKTNLQVWTVAQAINFSYVSPAYRVLFGNLVALWWSFYLSRLG 225
BLAST of NO02G00830 vs. NCBI_GenBank
Match: XP_009517398.1 (hypothetical protein PHYSODRAFT_323562 [Phytophthora sojae] >EGZ30123.1 hypothetical protein PHYSODRAFT_323562 [Phytophthora sojae]) HSP 1 Score: 132.1 bits (331), Expect = 2.300e-27 Identity = 72/164 (43.90%), Postives = 98/164 (59.76%), Query Frame = 0 Query: 56 YHNSLVSRPLATKAVTSALISALGDVLAS--SGRAGRGRNGKRTLGFLLFGGLITGPVCHYWYGFLERHVKTFHGAKNVAIKVLLDKLLFTPPFLALTLFLLRALETGRFGPAWQGMKHIYVPTLKTNLKVWTVAQAINFTYTPPAYRVLFGNVVALWWSFYLS 218 Y +L + PL TKAVTSA ++ LG+VL + RG + ++ L F FGG +TGPV HYWYG+LE + K+LLD+LLFTPP +A T+F L + + + + +Y L N KVWT+ Q ++F Y PP RVL+GN VALWW+ YLS Sbjct: 7 YQLALQTNPLRTKAVTSAGVAMLGEVLGHVLKHKTLRGLSPRQMLAFFAFGGAVTGPVLHYWYGYLETQ-RVTKEKLTPNKKLLLDRLLFTPPMVAFTIFSLGVMRGSSPKASRENLSRVYWGALLMNWKVWTLTQWLSFHYVPPLLRVLWGNCVALWWNSYLS 169
BLAST of NO02G00830 vs. NCBI_GenBank
Match: XP_008605135.1 (hypothetical protein SDRG_01390 [Saprolegnia diclina VS20] >EQC41421.1 hypothetical protein SDRG_01390 [Saprolegnia diclina VS20]) HSP 1 Score: 129.4 bits (324), Expect = 1.500e-26 Identity = 76/178 (42.70%), Postives = 105/178 (58.99%), Query Frame = 0 Query: 43 KTLKGELKRLIGAYHNSLVSRPLATKAVTSALISALGDVLAS--SGRAGRGRNGKRTLGFLLFGGLITGPVCHYWYGFLER-HVKTFHGAKNVAIKVLLDKLLFTPPFLALTLFLLRALETGRFGPAWQGMKHIYVPTLKTNLKVWTVAQAINFTYTPPAYRVLFGNVVALWWSFYLS 218 K K + + Y +L RPL TKA+TSA + A G+++A ++ +G + +R L F L+ G IT PV H WYGFLE+ V+ + N K+L D+LL TPPFLALTLF L L + ++ Y+ L N KVWT+ Q ++F Y PP RVL+GN VA+WW+ YLS Sbjct: 5 KRTKADAVSMWQHYQAALQKRPLQTKAITSAAMGAFGEIVAHGLKHKSLQGLSLQRILAFALYSGGITAPVMHAWYGFLEQCRVRGDRLSNNG--KLLFDRLLLTPPFLALTLFTLSLLTGASVAASKTLVRTKYITALWMNWKVWTLTQYLSFNYVPPHLRVLWGNAVAVWWNCYLS 180
BLAST of NO02G00830 vs. NCBI_GenBank
Match: ETL26953.1 (hypothetical protein L916_19436 [Phytophthora parasitica]) HSP 1 Score: 127.9 bits (320), Expect = 4.300e-26 Identity = 72/167 (43.11%), Postives = 101/167 (60.48%), Query Frame = 0 Query: 56 YHNSLVSRPLATKAVTSALISALGDVLAS--SGRAGRGRNGKRTLGFLLFGGLITGPVCHYWYGFLERHVKTFHGAKNVAI---KVLLDKLLFTPPFLALTLFLLRALETGRFGPAWQGMKHIYVPTLKTNLKVWTVAQAINFTYTPPAYRVLFGNVVALWWSFYLS 218 Y +L + PL TKA+TSA ++ LG+VL + RG + ++ L F FGG++TGPV H+WYG+LE T AK K+LLD+LLFTPP +A T+F L + + + + +Y L N KVWT+ Q ++F PP +RVL+GN VALWW+ YLS Sbjct: 209 YQLALQTNPLRTKALTSAGVAMLGEVLGHVLKHKTLRGLSPRQMLAFFAFGGVVTGPVLHFWYGYLE----TQRVAKKKLTPNRKLLLDRLLFTPPMVAFTIFSLGIMRGSSPKASRENLSRVYWNALLMNWKVWTLTQWLSFHCVPPQFRVLWGNCVALWWNSYLS 371
BLAST of NO02G00830 vs. NCBI_GenBank
Match: ETL80196.1 (hypothetical protein L917_19279 [Phytophthora parasitica]) HSP 1 Score: 127.1 bits (318), Expect = 7.400e-26 Identity = 71/166 (42.77%), Postives = 100/166 (60.24%), Query Frame = 0 Query: 57 HNSLVSRPLATKAVTSALISALGDVLAS--SGRAGRGRNGKRTLGFLLFGGLITGPVCHYWYGFLERHVKTFHGAKNVAI---KVLLDKLLFTPPFLALTLFLLRALETGRFGPAWQGMKHIYVPTLKTNLKVWTVAQAINFTYTPPAYRVLFGNVVALWWSFYLS 218 H L + + TKA+TSA ++ LG+VL + RG + ++ L F FGG++TGPV H+WYG+LE T AK K+LLD+LLFTPP +A T+F L + + + + +Y L N KVWT+ Q ++F Y PP +RVL+GN VALWW+ YLS Sbjct: 192 HRVLCNVAIRTKALTSAGVAMLGEVLGHVLKHKTLRGLSPRQMLAFFAFGGVVTGPVLHFWYGYLE----TQRVAKKKLTPNRKLLLDRLLFTPPMVAFTIFSLGIMRGSSPKASRENLSRVYWNALLMNWKVWTLTQWLSFHYVPPQFRVLWGNCVALWWNSYLS 353
BLAST of NO02G00830 vs. NCBI_GenBank
Match: ETP31194.1 (hypothetical protein F442_19910 [Phytophthora parasitica P10297]) HSP 1 Score: 127.1 bits (318), Expect = 7.400e-26 Identity = 71/166 (42.77%), Postives = 100/166 (60.24%), Query Frame = 0 Query: 57 HNSLVSRPLATKAVTSALISALGDVLAS--SGRAGRGRNGKRTLGFLLFGGLITGPVCHYWYGFLERHVKTFHGAKNVAI---KVLLDKLLFTPPFLALTLFLLRALETGRFGPAWQGMKHIYVPTLKTNLKVWTVAQAINFTYTPPAYRVLFGNVVALWWSFYLS 218 H L + + TKA+TSA ++ LG+VL + RG + ++ L F FGG++TGPV H+WYG+LE T AK K+LLD+LLFTPP +A T+F L + + + + +Y L N KVWT+ Q ++F Y PP +RVL+GN VALWW+ YLS Sbjct: 192 HRVLCNVAIRTKALTSAGVAMLGEVLGHVLKHKTLRGLSPRQMLAFFAFGGVVTGPVLHFWYGYLE----TQRVAKKKLTPNRKLLLDRLLFTPPMVAFTIFSLGIMRGSSPKASRENLSRVYWNALLMNWKVWTLTQWLSFHYVPPQFRVLWGNCVALWWNSYLS 353
BLAST of NO02G00830 vs. NCBI_GenBank
Match: ETM33451.1 (hypothetical protein L914_19315 [Phytophthora parasitica]) HSP 1 Score: 123.6 bits (309), Expect = 8.200e-25 Identity = 70/166 (42.17%), Postives = 99/166 (59.64%), Query Frame = 0 Query: 57 HNSLVSRPLATKAVTSALISALGDVLAS--SGRAGRGRNGKRTLGFLLFGGLITGPVCHYWYGFLERHVKTFHGAKNVAI---KVLLDKLLFTPPFLALTLFLLRALETGRFGPAWQGMKHIYVPTLKTNLKVWTVAQAINFTYTPPAYRVLFGNVVALWWSFYLS 218 H L + + TKA+TSA ++ LG+VL + RG + ++ L F FGG++TGPV H+WYG+LE T AK K+LLD+LLFTPP +A T+F L + + + + +Y L N KVWT+ Q ++F PP +RVL+GN VALWW+ YLS Sbjct: 192 HRVLCNVAIRTKALTSAGVAMLGEVLGHVLKHKTLRGLSPRQMLAFFAFGGVVTGPVLHFWYGYLE----TQRVAKKKLTPNRKLLLDRLLFTPPMVAFTIFSLGIMRGSSPKASRENLSRVYWNALLMNWKVWTLTQWLSFHCVPPQFRVLWGNCVALWWNSYLS 353
BLAST of NO02G00830 vs. NCBI_GenBank
Match: XP_008914166.1 (hypothetical protein PPTG_24249 [Phytophthora parasitica INRA-310] >ETN00495.1 hypothetical protein PPTG_24249 [Phytophthora parasitica INRA-310]) HSP 1 Score: 123.6 bits (309), Expect = 8.200e-25 Identity = 70/166 (42.17%), Postives = 99/166 (59.64%), Query Frame = 0 Query: 57 HNSLVSRPLATKAVTSALISALGDVLAS--SGRAGRGRNGKRTLGFLLFGGLITGPVCHYWYGFLERHVKTFHGAKNVAI---KVLLDKLLFTPPFLALTLFLLRALETGRFGPAWQGMKHIYVPTLKTNLKVWTVAQAINFTYTPPAYRVLFGNVVALWWSFYLS 218 H L + + TKA+TSA ++ LG+VL + RG + ++ L F FGG++TGPV H+WYG+LE T AK K+LLD+LLFTPP +A T+F L + + + + +Y L N KVWT+ Q ++F PP +RVL+GN VALWW+ YLS Sbjct: 192 HRVLCNVAIRTKALTSAGVAMLGEVLGHVLKHKTLRGLSPRQMLAFFAFGGVVTGPVLHFWYGYLE----TQRVAKKKLTPNRKLLLDRLLFTPPMVAFTIFSLGIMRGSSPKASRENLSRVYWNALLMNWKVWTLTQWLSFHCVPPQFRVLWGNCVALWWNSYLS 353
BLAST of NO02G00830 vs. NCBI_GenBank
Match: ETI33224.1 (hypothetical protein F443_20086 [Phytophthora parasitica P1569]) HSP 1 Score: 121.3 bits (303), Expect = 4.000e-24 Identity = 68/158 (43.04%), Postives = 96/158 (60.76%), Query Frame = 0 Query: 65 LATKAVTSALISALGDVLAS--SGRAGRGRNGKRTLGFLLFGGLITGPVCHYWYGFLERHVKTFHGAKNVAI---KVLLDKLLFTPPFLALTLFLLRALETGRFGPAWQGMKHIYVPTLKTNLKVWTVAQAINFTYTPPAYRVLFGNVVALWWSFYLS 218 + TKA+TSA ++ LG+VL + RG + ++ L F FGG++TGPV H+WYG+LE T AK K+LLD+LLFTPP +A T+F L + + + + +Y L N KVWT+ Q ++F PP +RVL+GN VALWW+ YLS Sbjct: 176 IETKALTSAGVAMLGEVLGHVLKHKTLRGLSPRQMLAFFAFGGVVTGPVLHFWYGYLE----TQRVAKKKLTPNRKLLLDRLLFTPPMVAFTIFSLGIMRGSSPKASRENLSRVYWNALLMNWKVWTLTQWLSFHCVPPQFRVLWGNCVALWWNSYLS 329 The following BLAST results are available for this feature:
BLAST of NO02G00830 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO02G00830 ID=NO02G00830|Name=NO02G00830|organism=Nannochloropsis oceanica|type=gene|length=2836bpback to top protein sequence of NO02G00830.1 >NO02G00830.1-protein ID=NO02G00830.1-protein|Name=NO02G00830.1|organism=Nannochloropsis oceanica|type=polypeptide|length=241bpback to top Synonyms
Publications
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