NO02G00820, NO02G00820 (gene) Nannochloropsis oceanica

Overview
NameNO02G00820
Unique NameNO02G00820
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2836
Alignment locationchr2:266308..269143 +

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr2genomechr2:266308..269143 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
BLAST of NO02G00820 vs. NCBI_GenBank
Match: XP_005853550.1 (hypothetical protein NGA_0357402, partial [Nannochloropsis gaditana CCMP526] >EKU22809.1 hypothetical protein NGA_0357402, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 449.1 bits (1154), Expect = 1.300e-122
Identity = 233/345 (67.54%), Postives = 268/345 (77.68%), Query Frame = 0
Query:   28 QIKYLPVLLVLITLLAFASAFLPQ----SPSRRLPLPLARRP---SRSPHATN-GGVNDGPTYFEWLGRQVELKLRPKPYQGLRLKIDKELAVLLMRSSYEIADELDFVAMNDFQKDFFTFRQAEWEDYVNTFPPLSVRQGELTQPSYFDFISFAQYCTLNEEMRHGKMVFVELISAEGEKQVVRRADDPSLPQDNALLPAEHARRVGQRILDKFLEAPEVYAPTVRGREKGKEGRAGDEEVLENVKRIMDLFTAKQYNQGGEVRVLXXXXXXXRG-----IMKLQISSRAPANLWSLQSLLFRKEPLLNDFEGKAVAAYLRASGREGGSYGVEVQGTDVIYTIS 360
            Q  YL  L + +T  A ASAF+ Q    S  R   LP+   P       H T       GPTYFEWLGRQ ELKLRP+PYQGLRLKI+++LAVLLMRSSYE+ADELDFV MNDFQKDFFTFRQAEWEDYV  FPPLSVRQGELTQPSYFDFISFAQYCTLNEEMRHGK+ FVEL+SAEGEK+VVRR+DDPSLPQDN+LLPAEH+RRVG RIL + LEAPEVYAP + GR        G EEV+E+VKRI+DLFTAKQ+NQGGEV++L       +G      MKL+++SRAPANLWSLQSL+FR EPLLNDFEGKAV AYL+  G++ G+Y V+VQG DV++T S
Sbjct:   72 QYTYLAGLFLWLTSPALASAFVSQFSSCSSIREAALPMIHSPFSIRGDYHCTALNAERSGPTYFEWLGRQAELKLRPQPYQGLRLKIERDLAVLLMRSSYEVADELDFVPMNDFQKDFFTFRQAEWEDYVGAFPPLSVRQGELTQPSYFDFISFAQYCTLNEEMRHGKLAFVELVSAEGEKRVVRRSDDPSLPQDNSLLPAEHSRRVGDRILQRLLEAPEVYAPRLSGRGXXXXXXVGVEEVVEDVKRIVDLFTAKQFNQGGEVKMLAEKEGARKGGAAWQGMKLKVTSRAPANLWSLQSLMFRNEPLLNDFEGKAVRAYLQGVGKKEGTYAVQVQGNDVVHTFS 416          
BLAST of NO02G00820 vs. NCBI_GenBank
Match: EWM30592.1 (hypothetical protein Naga_100033g22 [Nannochloropsis gaditana])

HSP 1 Score: 449.1 bits (1154), Expect = 1.300e-122
Identity = 233/345 (67.54%), Postives = 268/345 (77.68%), Query Frame = 0
Query:   28 QIKYLPVLLVLITLLAFASAFLPQ----SPSRRLPLPLARRP---SRSPHATN-GGVNDGPTYFEWLGRQVELKLRPKPYQGLRLKIDKELAVLLMRSSYEIADELDFVAMNDFQKDFFTFRQAEWEDYVNTFPPLSVRQGELTQPSYFDFISFAQYCTLNEEMRHGKMVFVELISAEGEKQVVRRADDPSLPQDNALLPAEHARRVGQRILDKFLEAPEVYAPTVRGREKGKEGRAGDEEVLENVKRIMDLFTAKQYNQGGEVRVLXXXXXXXRG-----IMKLQISSRAPANLWSLQSLLFRKEPLLNDFEGKAVAAYLRASGREGGSYGVEVQGTDVIYTIS 360
            Q  YL  L + +T  A ASAF+ Q    S  R   LP+   P       H T       GPTYFEWLGRQ ELKLRP+PYQGLRLKI+++LAVLLMRSSYE+ADELDFV MNDFQKDFFTFRQAEWEDYV  FPPLSVRQGELTQPSYFDFISFAQYCTLNEEMRHGK+ FVEL+SAEGEK+VVRR+DDPSLPQDN+LLPAEH+RRVG RIL + LEAPEVYAP + GR        G EEV+E+VKRI+DLFTAKQ+NQGGEV++L       +G      MKL+++SRAPANLWSLQSL+FR EPLLNDFEGKAV AYL+  G++ G+Y V+VQG DV++T S
Sbjct:   60 QYTYLAGLFLWLTSPALASAFVSQFSSCSSIREAALPMIHSPFSIRGDYHCTALNAERSGPTYFEWLGRQAELKLRPQPYQGLRLKIERDLAVLLMRSSYEVADELDFVPMNDFQKDFFTFRQAEWEDYVGAFPPLSVRQGELTQPSYFDFISFAQYCTLNEEMRHGKLAFVELVSAEGEKRVVRRSDDPSLPQDNSLLPAEHSRRVGDRILQRLLEAPEVYAPRLSGRGXXXXXXVGVEEVVEDVKRIVDLFTAKQFNQGGEVKMLAEKEGARKGGAAWQGMKLKVTSRAPANLWSLQSLMFRNEPLLNDFEGKAVRAYLQGVGKKEGTYAVQVQGNDVVHTFS 404          
BLAST of NO02G00820 vs. NCBI_GenBank
Match: XP_005776863.1 (hypothetical protein EMIHUDRAFT_238471 [Emiliania huxleyi CCMP1516] >XP_005778047.1 hypothetical protein EMIHUDRAFT_237380 [Emiliania huxleyi CCMP1516] >EOD24434.1 hypothetical protein EMIHUDRAFT_238471 [Emiliania huxleyi CCMP1516] >EOD25618.1 hypothetical protein EMIHUDRAFT_237380 [Emiliania huxleyi CCMP1516])

HSP 1 Score: 184.1 bits (466), Expect = 7.600e-43
Identity = 116/288 (40.28%), Postives = 160/288 (55.56%), Query Frame = 0
Query:   69 PHATNGGVNDGPTYFEWLGRQVELKLRPKPYQGLRLKIDKELAVLLMRSSYEIADELDFVAMNDFQKDFFTFRQAEWEDYVNTFPPLSVRQGELTQPSYFDFISFAQYCTLNEEMRHGKMVFVELISAEGEKQVVRRADDPSLPQDNALLPAEHARRVGQRILDKFLEAPEVYAPTVRGREKGKEGRAGDEEVLENVKRIMDLFTAKQYNQGGEVRVLXXXXXXXRGIMKLQISSRAPANLWSLQSLLFRKEPLLNDFEGKAVAAYLRASGREGGSYGVEVQGTDVIY 357
            P   +  ++   ++ + L  Q      P+P    R +ID + AVLLMR+SY  ADELDF+ M++FQK  F  RQ +WE Y    PP  V+QG+++ P+YFDF+S+ QY T+   MR G++VF ELI A G   VV R  DP+LP+DNA LPA  + RVG +ILD   E     APTV       E R     +LE VK +  +F    Y     +          RG    Q+S+ APA +WS Q L  R + L+NDFE KA+AAYLR    +  SY    +G++V++
Sbjct:   88 PRPLDERIDSRTSFAQILREQAVRAAGPRPRSLPRRRIDIDFAVLLMRTSYATADELDFMPMDEFQKRQFLLRQDDWEGYRQPLPP--VKQGDISDPNYFDFMSYCQYATIAAGMRDGRVVFEELIDANGTSVVVAR--DPALPRDNARLPALLSLRVGDKILDAIAERYPGLAPTV-------ELRPSRAALLEGVKALAQVFEYNNYLLSARLE------PSERG---FQLSAIAPATVWSQQVLSLRGD-LVNDFEAKAIAAYLRRCAVD-ASYTTRYEGSEVVH 353          
BLAST of NO02G00820 vs. NCBI_GenBank
Match: CEM07055.1 (unnamed protein product [Vitrella brassicaformis CCMP3155])

HSP 1 Score: 182.6 bits (462), Expect = 2.200e-42
Identity = 109/272 (40.07%), Postives = 146/272 (53.68%), Query Frame = 0
Query:   96 PKPYQGLRLKIDKELAVLLMRSSYEIADELDFVAMNDFQKDFFTFRQAEWEDYVNTFPPLSVRQGELTQPSYFDFISFAQYCTLNEEMRHGKMVFVELISAEGEKQVVRRADDPSLPQDNALLPAEHARRVGQRILDKFLEAPEVYAPTVRGREKGK-------EGRAGDEEVLENVKRIMDLFTAKQYNQGGEVRVLXXXXXXXRGIMKLQISSRAPANLWSLQSLLFRKEPLLNDFEGKAVAAYLRASGREGGSYGVEVQGTDVIYTISI 361
            P P +  R +I+++ AV +MR SY +ADELDFV MNDFQKDFF +RQ EWE Y     P+ + QG+L   +YFDFISFAQY TL  EM  G+ +FVE   A GE+Q+VRR   P+   DN+LLP+EH+RRVG R+LD  ++            E GK         R     V+ NV++I +L T   Y + GE ++         G    ++    PA LW  Q L  R   L ND+E K   AY R  G           G+ V++T  +
Sbjct:   64 PAPVKIPRTRINQDFAVQMMRQSYNVADELDFVPMNDFQKDFFLYRQNEWERYRERLKPMPITQGDLADANYFDFISFAQYLTLYTEMCSGQQLFVEKTGATGEEQLVRR---PAFLADNSLLPSEHSRRVGDRLLDFLID-------RFNTDESGKTCCIIRAAARPSPSFVVSNVQQIANLMTILGYAEKGEAKLTGERDD---GKFSFEMMLVLPATLWGQQVLSIRGAGLPNDYEAKIAMAYTRRCGYRATYRTSFEGGSSVVHTFLV 322          
BLAST of NO02G00820 vs. NCBI_GenBank
Match: XP_005764128.1 (hypothetical protein EMIHUDRAFT_120287 [Emiliania huxleyi CCMP1516] >EOD11699.1 hypothetical protein EMIHUDRAFT_120287 [Emiliania huxleyi CCMP1516])

HSP 1 Score: 181.8 bits (460), Expect = 3.800e-42
Identity = 113/261 (43.30%), Postives = 151/261 (57.85%), Query Frame = 0
Query:   96 PKPYQGLRLKIDKELAVLLMRSSYEIADELDFVAMNDFQKDFFTFRQAEWEDYVNTFPPLSVRQGELTQPSYFDFISFAQYCTLNEEMRHGKMVFVELISAEGEKQVVRRADDPSLPQDNALLPAEHARRVGQRILDKFLEAPEVYAPTVRGREKGKEGRAGDEEVLENVKRIMDLFTAKQYNQGGEVRVLXXXXXXXRGIMKLQISSRAPANLWSLQSLLFRKEPLLNDFEGKAVAAYLRASGREGGSYGVEVQGTDVIY 357
            P+P    R +ID + AVLLMR+SY  ADELDF+ M++FQK  F  RQ +WE Y    PP  V+QG+++ P+YFDF+S+ QY T+   MR G++VF ELI A G   VV R  DP+LP+DNA LPA  + RVG +ILD   E     APTV       E R     +LE VK +  +F    Y     +          RG    Q+S+ APA +WS Q L  R + L+NDFE KA+AAYLR    +  SY    +G++V++
Sbjct:  170 PRPRSLPRRRIDIDFAVLLMRTSYATADELDFMPMDEFQKRQFLLRQDDWEGYRQPLPP--VKQGDISDPNYFDFMSYCQYATIAAGMRDGRVVFEELIDANGTSVVVAR--DPALPRDNARLPALLSLRVGDKILDAIAERYPGLAPTV-------ELRPSRAALLEGVKALAQVFEYNNYLLSARLE------PSERG---FQLSAIAPATVWSQQVLSLRGD-LVNDFEAKAIAAYLRRCAVD-ASYTTRYEGSEVVH 408          
BLAST of NO02G00820 vs. NCBI_GenBank
Match: KOO35024.1 (hypothetical protein Ctob_009999 [Chrysochromulina sp. CCMP291])

HSP 1 Score: 172.6 bits (436), Expect = 2.300e-39
Identity = 110/270 (40.74%), Postives = 147/270 (54.44%), Query Frame = 0
Query:   90 VELKLRPKPYQGLRLKIDKELAVLLMRSSYEIADELDFVAMNDFQKDFFTFRQAEWEDYVNTFPPLSVRQGELTQPSYFDFISFAQYCTLNEEMRHGKMVFVELISAEGEKQVVRRADDPSLPQDNALLPAEHARRVGQRILDKFLEAPEVYAPTVRGREKGKEGRAGDEEVLENVKRIMDLFTAKQYNQGGEVRVLXXXXXXXRGIMKLQISSRAPANLWSLQSLLFRKEPLLNDFEGKAVAAYLRASGREGGSY-GVEVQGTDVIYTI 359
            +E  +RPK     R +++++ AVLLMR+SY +ADELDF+ M++FQK+ F FRQ EW+ Y    P   V QG+LT P+YFDFISF QY ++   MR G+M+F ELI A G   +V RA  P+LPQ N LLP  H+ RVG R+L+  LE  +     V         RA    ++E  +R+ D+FT  ++     V  L         ++       APA LW  Q L  R +   NDFE  AV AYLR  G    S    E  GT V + I
Sbjct:  438 IEASMRPKIRALPRRRLEQDFAVLLMRTSYAVADELDFMPMDEFQKEQFLFRQREWDTYREKLP---VMQGDLTDPAYFDFISFCQYASIASGMRRGRMIFEELIDANGTSVIVSRA--PTLPQRNELLPEAHSIRVGDRLLNWMLERYDGVLRPVIPPTSSALPRA--PVLVEGCQRVADIFTLNEFALTSTVTPLASGAGVAWTLV-------APATLWGAQVLQLRGDEPKNDFEVMAVLAYLRRCGVPATSITRFEKGGTQVTHEI 693          
BLAST of NO02G00820 vs. NCBI_GenBank
Match: GAX23252.1 (hypothetical protein FisN_21Hh064 [Fistulifera solaris])

HSP 1 Score: 162.5 bits (410), Expect = 2.400e-36
Identity = 111/287 (38.68%), Postives = 155/287 (54.01%), Query Frame = 0
Query:   86 LGRQVELKLRPKPYQGLRLKIDKELAVLLMRSSYEIADELDFVAMNDFQKDFFTFRQAEWEDYVNTFPPLSVRQGELTQPSYFDFISFAQYCTLNEEMRHG-KMVFVEL--------ISAEGEKQVVRRADDPSLPQDNALLPAEHARRVGQRILDKFLEAPEVYAPTVRGREKGKEG-RAGDEEVLENVKRIMDLFTAKQYNQGG--EVRVLXXXXXXXRGIMKLQISSRAPANLWSLQSLLFRKEPLLNDFEGKAVAAYLRASGREGGSYGVEVQGTDVIYTISI 361
            LG Q   KLRPKP + LR K++ + AVLLMRSSY + DELD V M+ FQ+DFF  R AE+E YVN   P  V QG+LT P YFDFISFAQY T+N  + +   MVF E         +  E  K +VRR  DP++  D  L  +EH  RVG++ILD+     E++  +     K   G R G +EVL +  +++ LF    Y   G  EV+          G     ++ ++PA LW  ++L F+K PL ND+  K   A  +  G    S  ++ +G   I  +++
Sbjct:   71 LGAQTLRKLRPKPPRILRQKLNLDFAVLLMRSSYAVTDELDIVPMDQFQRDFFLIRSAEYEPYVNDLGPGLVSQGDLTDPYYFDFISFAQYMTINRILTNDPPMVFEEQQAINKGDDVPNEFVKVIVRR--DPTITNDRLL--SEHNERVGKKILDRL---NEIFGDSPSSLPKFPSGSRPGADEVLASFSQLIKLFLINGYAFDGVAEVKKASTIPGTASG-ATFSLTLQSPATLWGGKALAFQKSPLPNDYLLKTSIALAQDLGYRVVSSSLKYEGNSEISLLTL 349          
BLAST of NO02G00820 vs. NCBI_GenBank
Match: GAX26597.1 (hypothetical protein FisN_21Lh064 [Fistulifera solaris])

HSP 1 Score: 161.0 bits (406), Expect = 6.900e-36
Identity = 108/290 (37.24%), Postives = 153/290 (52.76%), Query Frame = 0
Query:   86 LGRQVELKLRPKPYQGLRLKIDKELAVLLMRSSYEIADELDFVAMNDFQKDFFTFRQAEWEDYVNTFPPLSVRQGELTQPSYFDFISFAQYCTLNEEMRHGKMVFVELISA---------EGEKQVVRRADDPSLPQDNALLPAEHARRVGQRILDK----FLEAPEVYAPTVRGREKGKEGRAGDEEVLENVKRIMDLFTAKQYNQGG--EVRVLXXXXXXXRGIMKLQISSRAPANLWSLQSLLFRKEPLLNDFEGKAVAAYLRASGREGGSYGVEVQGTDVIYTISI 361
            LG Q   + RPKP + LR K++ + AV LMRSSY + DELD V M+ FQ+DFF  R AE+E YVN   P  V QG+LT P YFDFISFAQY T+N  + +   V  E   A         E  K +VRR  DPS+  D  L  +EH  RVG++ILDK    F ++P      + G       R G +E++ ++ +++ LF    Y   G  EV++         G     ++ ++PA LW  ++L F+K PL ND+  K   A  +  G    S  V+ +G   I  +++
Sbjct:   71 LGAQTLRRFRPKPPRILRQKLNLDFAVSLMRSSYAVTDELDIVPMDQFQRDFFLIRSAEYEPYVNDLGPGLVSQGDLTDPYYFDFISFAQYLTINRILINDPPVVFEEQQAINKGDDVPNEFVKVIVRR--DPSITNDRLL--SEHNERVGKKILDKLNETFGDSPSSLPKFLNG------SRPGADEIMASLSQLIKLFLINGYAFDGVAEVKIASAIPGSASG-ATFSLTLQSPATLWGGKALAFQKSPLRNDYLLKTSIALAQDLGYRVVSSSVKYEGNSEISLLTL 349          
BLAST of NO02G00820 vs. NCBI_GenBank
Match: PTQ50431.1 (hypothetical protein MARPO_0001s0401 [Marchantia polymorpha])

HSP 1 Score: 154.1 bits (388), Expect = 8.400e-34
Identity = 106/298 (35.57%), Postives = 154/298 (51.68%), Query Frame = 0
Query:   63 RRPSRSPHATNGGVNDGPTYFEWLGRQVE---LKLRPKPYQGLRLKIDKELAVLLMRSSYEIADELDFVAMNDFQKDFFTFRQAEWEDYVNTFPPLSVRQGELTQPSYFDFISFAQYCTLNEEMRHGKMVFVELISAEGEKQVVRRADDPSLPQDNALLPAEHARRVGQRILDKFLEAPE---VYAPTVRGREKGKEGRAGDEEVLENVKRIMDLFTAKQYNQGGEVRVLXXXXXXXRGIMKLQISSRAPANLWSLQSLLFRKEPLLNDFEGKAVAAYLRASGREGGSYGVEVQGTDV 355
            R  SR  H     V  GP     L  Q+    +   P+P Q  R  ++ + AVLLMRS+YE  D+LDF+ MN FQ  F+  RQ+E E Y   + PL V+ G+LT P YFDFISFAQ+ T+++E++ G++VF E + A GE Q VRR  D SL  DNA LP     R G  I ++ LE  E     AP     +      +    V++NV++++ +   + Y     V  +        G  K ++     A LW LQ+L+ R+  +L++F+  AV  +LRA  R   +Y +    T V
Sbjct:   65 RNGSRFRHLVRASVL-GPELSYELADQINAWIIPAPPEPVQFPRKTLNLKFAVLLMRSAYEAVDDLDFIPMNKFQVKFWKLRQSELEPYTLQYKPLRVKYGDLTDPLYFDFISFAQFATISKEIQTGEVVFQEKLGASGELQTVRR--DASL-VDNAKLPTAFIERAGNIIYERLLEGFEDDSFNAPPPLSED------SSFSVVVQNVQKLLQILVDQGYALKAVVDEVESFTDSRGG--KFRVKVDGSATLWGLQTLVSRRALVLSNFDALAVGGFLRACKRH-ATYKIRCSDTSV 349          
BLAST of NO02G00820 vs. NCBI_GenBank
Match: XP_002290328.1 (predicted protein [Thalassiosira pseudonana CCMP1335] >EED92080.1 predicted protein [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 151.8 bits (382), Expect = 4.200e-33
Identity = 100/259 (38.61%), Postives = 141/259 (54.44%), Query Frame = 0
Query:   91 ELKLRPKPYQGLRLKIDKELAVLLMRSSYEIADELDFVAMNDFQKDFFTFRQAEWEDYVNTFPPLSVRQGELTQPSYFDFISFAQYCTLNEEMRHGKMVFVE---LISAEGEKQ-----VVRRADDPSLPQDNALLPAEHARRVGQRILDKFLEAPEVYAPTVRGREKGKEGRAGDEEVL-ENVKRIMDLFTAKQYNQGGEVRVL-XXXXXXXRGIMKLQISSRAPANLWSLQSLLFRKEPLLNDFEGKAVAAYLRASG 340
            E  LRPKP + LR +++ + AVLLMRSSY   D +D VAM+ FQ+DFF  RQAE+  Y N   P +++QG+L  P+YFDFISFAQY T+N E+ +   VF E   +   EGE Q     VV+R  DP+L   N  LP +HA  VG  ILD  LE    +  T     K +     D + L  ++K++++LF    +   G   ++            +  I+  +PA LWS QSL  +   L+NDF  K   A ++ +G
Sbjct:   90 ERALRPKPPKVLRPRMNLDFAVLLMRSSYNAVDTIDIVAMDQFQRDFFLIRQAEYLPYANALGPGAMQQGDLADPNYFDFISFAQYSTINREINNPPAVFEEQQPVEVGEGEPQQFVSVVVKR--DPTL--SNKDLPVKHAEIVGDAILDTLLEK---FGGTASAIPKIESSSRPDVDTLFASIKQVVNLFVVSGFAWDGNASIVQSGKSGTDASETQFAITFTSPATLWSGQSLKAKNAVLMNDFALKTAKALIQRAG 341          
The following BLAST results are available for this feature:
BLAST of NO02G00820 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
XP_005853550.11.300e-12267.54hypothetical protein NGA_0357402, partial [Nannoch... [more]
EWM30592.11.300e-12267.54hypothetical protein Naga_100033g22 [Nannochlorops... [more]
XP_005776863.17.600e-4340.28hypothetical protein EMIHUDRAFT_238471 [Emiliania ... [more]
CEM07055.12.200e-4240.07unnamed protein product [Vitrella brassicaformis C... [more]
XP_005764128.13.800e-4243.30hypothetical protein EMIHUDRAFT_120287 [Emiliania ... [more]
KOO35024.12.300e-3940.74hypothetical protein Ctob_009999 [Chrysochromulina... [more]
GAX23252.12.400e-3638.68hypothetical protein FisN_21Hh064 [Fistulifera sol... [more]
GAX26597.16.900e-3637.24hypothetical protein FisN_21Lh064 [Fistulifera sol... [more]
PTQ50431.18.400e-3435.57hypothetical protein MARPO_0001s0401 [Marchantia p... [more]
XP_002290328.14.200e-3338.61predicted protein [Thalassiosira pseudonana CCMP13... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniR032ncniR032Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR000ngnoR000Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO02G00820.1NO02G00820.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|667684gene_659Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100033g22gene95Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO02G00820.1NO02G00820.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO02G00820 ID=NO02G00820|Name=NO02G00820|organism=Nannochloropsis oceanica|type=gene|length=2836bp
CCTCCCTCCCTCGCCTGCGTCCCTTCCTTTCTATCAACAAACCCAAGACG
CATCCCGACAAATTAATAACTCCTCCGCACAATCACAATGGACGACGCTT
TCCCTGCCCCTCCTCCGGCCCCTCCCCCCAATCGGGACAAGTAAAAGCTC
CACCACAACGCCACCACATTCCCAAACAAGACCCGATACGCCGGGGGGGT
GTAGGTAAAATTGATGGCTTGGGCCACCGTCCAGACCTTCAAATTCGTCT
TTAACGTAGGTACGTAAATATGTTTCATCCCTTGCCAAGCCGGTCCGAAG
CGACCCGTCTCGAGAGCACGAAGGAGGAAAAGAGTGAGGGCGAGGAAGGG
CGGCGTGAAGAGCAGCTTGTCTAAGAGGACCTTGATTGCCACATTCTTAG
CGCCGTGGAAGGTCTTTACATGGCGTTCGAGGAATCCATACCAATAGTGG
CAAACGGGGCCGGTGATCAGGCCTCCGAATAGAAGGAACCCAAGCGTTCG
TTTGCCGTTGCGCCCTCTCCCCGCACGACCTGACGAGGCCAAGACGTCGC
CCAAGGCGGAGATGAGTGCACTGGTCACGGCTTTCGTGGCGAGGGGCCGG
CTGACGAGACTGTTATGGTAGGCGCCAATGAGGCGTTTAAGCTCGCCCTG
CGTATGAGAAATGGAGGGAGTAAGAGATAGGACCAGGGGACGGGATGCGT
CGTGAGAGTGCGCGGGAGTATGTGGGGGGGAAGGGCGAAGGGAATGATGG
AAAAAGGGAGGAGACAAATGGAAATCAAGCCAGGCAGTTTAGGAGCCAAA
ACACGCCTCAATGTGGTGCATCTGGCGACGCGTAACTTTGAAAGTGGTGT
ACGCAAATTATGAGCGCATTTCGAGGTGCGATAGCTGGCAACATTCGAGT
CTGGGCCAAGGTCCAAGAGGAGATTCTCAACGTATCTACCCTACCCATTA
CACATGCATACGCGTACCTTTAGCGTCTTCGTGTGGGGGCTCGGGCTGGC
AGCAGGCAGGGCCAAGTGACTGCTGCTGGTGCCGGTGGTCGTTGACTCTG
TGGTGTCGTCTGTGATGATCGCCGGTGGCGGGACGTCGTCGACAACGCTG
GTCATGCTTTTGTGCGCTGAAAAAACTACCACACCGAGTTCTGTGTTTGC
CGAGAGTGGTGGGGAGGGTGAATGTGGGTGGTCAAGTGGCTGACATTTCA
AATATAGGAAGTGCAAGCGAGGGTATGCGAGTCATCAGCATACCCAAGTC
GTCATCGTCATCTGCATCAAGTGACGAGGTATGAGCTTGCTTGCCTGTCT
ACGCATGCCCATTTACCAAAGCAACGCTCTCTTTCTTCCCTCACAGGTAT
TCGGTATTATCTTAGTCGTCAGGCCAGCCTCAGGATCTTTCCGCTCGCAG
CTACGAGACTGAGGGGTAGGGCAGGTACGCGGGTTTGGACCGAAGAGCAA
ATGGACAGCTACCACCACCGACATCACTGTCCCTCCACGACAAGCAGCCG
AAGGCCGTCAAGGAGAAGACAGAAAACATGTCAGATAAAGTATCTGCCCG
TGCTTCTTGTCCTTATAACGCTTCTCGCCTTCGCATCTGCCTTCCTCCCG
CAATCCCCTTCCCGGCGGCTTCCTCTACCCCTCGCCCGCCGTCCTTCCCG
CAGCCCACACGCCACAAATGGCGGAGTAAACGACGGCCCAACATATTTCG
AATGGCTAGGTCGACAAGTCGAGCTCAAGCTTCGTCCAAAGCCGTACCAA
GGCCTGCGCTTGAAAATCGACAAGGAATTAGCAGTGTTGCTGATGCGGTC
CTCCTATGAGATTGCAGATGAGTTGGACTTTGTGGCAATGAATGACTTTC
AGAAGGATTTTTTCACATTTCGACAGgtaagagatggacagggggaagga
ggaaaggacgagaagaatgaaagggacaggaggacgaatagttgcggctg
tgaagtgtcggcgcaatctatacgctgttccttatttattccctgccctg
acaaatcccttgtttaagcttggtcgtatagtttctgtatcttagctgtt
ctctcaaaatatcacttcttccgcccccttcaaccctttgccccccccct
tcctccattagGCCGAATGGGAAGACTACGTCAACACCTTTCCCCCCCTC
TCCGTCCGGCAAGGCGAGCTTACCCAACCCTCCTACTTCGACTTTATTTC
CTTTGCACAATACTGCACATTAAATGAAGAAATGCGCCATGGCAAGATGG
TGTTTGTCGAGCTGATCTCTGCAGAGGGAGAAAAGCAGGTCGTCCGTCGG
GCGGACGACCCCTCCTTGCCTCAGGACAACGCCCTGTTACCCGCGGAGCA
TGCACGGAGGGTTGGACAAAGGATACTTGACAAGTTTCTGGAGGCGCCTG
AGGTGTATGCACCAACGGTCAGGGGCAGGGAGAAAGGGAAGGAGGGCCGG
GCGGGGGATGAGGAGGTGTTGGAGAACGTGAAGAGAATCATGGATTTGTT
CACGGCCAAACAGTACAATCAGGGAGGGGAGGTGAGGGTGCTAGAGGGAG
GGAAGGAGGGAAGAAGGGGGATAATGAAATTGCAGATTTCGAGTCGGGCG
CCGGCGAATTTGTGGAGCTTACAGAGTCTCTTGTTTCGAAAAGAGCCTTT
ATTAAACGACTTCGAAGGGAAGGCCGTGGCGGCTTACCTGAGGGCGAGCG
GGAGGGAGGGAGGAAGTTACGGTGTGGAGGTGCAGGGGACAGACGTAATT
TATACGATCAGTATTTAGAAGTAGGAGATGTGTATTGAGAAAATTGAAAC
AGAAATAAGGATTTATGAGTGCTATAACAAAACCAC
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protein sequence of NO02G00820.1

>NO02G00820.1-protein ID=NO02G00820.1-protein|Name=NO02G00820.1|organism=Nannochloropsis oceanica|type=polypeptide|length=361bp
MDSYHHRHHCPSTTSSRRPSRRRQKTCQIKYLPVLLVLITLLAFASAFLP
QSPSRRLPLPLARRPSRSPHATNGGVNDGPTYFEWLGRQVELKLRPKPYQ
GLRLKIDKELAVLLMRSSYEIADELDFVAMNDFQKDFFTFRQAEWEDYVN
TFPPLSVRQGELTQPSYFDFISFAQYCTLNEEMRHGKMVFVELISAEGEK
QVVRRADDPSLPQDNALLPAEHARRVGQRILDKFLEAPEVYAPTVRGREK
GKEGRAGDEEVLENVKRIMDLFTAKQYNQGGEVRVLEGGKEGRRGIMKLQ
ISSRAPANLWSLQSLLFRKEPLLNDFEGKAVAAYLRASGREGGSYGVEVQ
GTDVIYTISI*
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Synonyms
Publications