NO02G00800, NO02G00800 (gene) Nannochloropsis oceanica

Overview
NameNO02G00800
Unique NameNO02G00800
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length450
Alignment locationchr2:261623..262072 -

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Properties
Property NameValue
DescriptionGuanine nucleotide-binding 3
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr2genomechr2:261623..262072 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005525GTP binding
Homology
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BLAST of NO02G00800 vs. NCBI_GenBank
Match: EWM30590.1 (guanine nucleotide-binding 3 [Nannochloropsis gaditana])

HSP 1 Score: 85.5 bits (210), Expect = 1.500e-13
Identity = 58/131 (44.27%), Postives = 79/131 (60.31%), Query Frame = 0 
Query:   26 RSTRGGARKQHAAQALSQQRGTNSKVAATM-------TATVKGKVAAASLPKEKGPKKRGKAVAS-SSAISAVSMMMTLDNVDEDGLNPQVNQAAKKKWAAEKKKARKITRRTGGSGATAMDEAYDFATDF 149
            R++R G R+Q A + +S + G   K  A           T +G  A+    + +G +++ +   S S+   AVSM M LD+   DGLN Q+NQ A+KK  AE+KKARK+TRR GG+GATAMD  YDFATDF
Sbjct:  549 RTSRRGTRRQDAGK-VSTREGEKMKTEAGQGELKKKGRMTDRGSTASGKSAQGEGARRKERTKRSLSNQSEAVSMAMALDDAKGDGLNVQINQTARKKMVAERKKARKLTRRAGGTGATAMDADYDFATDF 678
The following BLAST results are available for this feature:
BLAST of NO02G00800 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 1
Match NameE-valueIdentityDescription
EWM30590.11.500e-1344.27guanine nucleotide-binding 3 [Nannochloropsis gadi... [more]
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL016nonsL016Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR032ncniR032Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR000ngnoR000Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO02G00800.1NO02G00800.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO02G00800.1NO02G00800.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO02G00800 ID=NO02G00800|Name=NO02G00800|organism=Nannochloropsis oceanica|type=gene|length=450bp
ATGGATTATGAGGAGAATGGTGAGGAGAAAGAGGAGGTGGATGGAGAGGT
GGAAGTCAGTGAGGCACCAGTGTCGCGGTCGACTCGTGGAGGGGCGAGGA
AGCAGCATGCGGCCCAGGCGCTTTCGCAACAACGCGGCACGAATAGCAAA
GTGGCCGCGACCATGACAGCGACAGTGAAGGGGAAAGTGGCGGCAGCTTC
TTTGCCCAAGGAGAAGGGGCCGAAGAAGAGGGGAAAGGCTGTGGCATCAA
GCTCAGCCATAAGCGCCGTCAGCATGATGATGACACTGGACAACGTGGAC
GAGGATGGATTGAACCCTCAAGTGAATCAAGCAGCGAAGAAAAAGTGGGC
GGCGGAGAAGAAAAAAGCGCGCAAGATAACTAGGCGAACGGGAGGGTCGG
GAGCAACAGCCATGGACGAGGCGTACGATTTTGCCACCGATTTTTCGTAG
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protein sequence of NO02G00800.1

>NO02G00800.1-protein ID=NO02G00800.1-protein|Name=NO02G00800.1|organism=Nannochloropsis oceanica|type=polypeptide|length=150bp
MDYEENGEEKEEVDGEVEVSEAPVSRSTRGGARKQHAAQALSQQRGTNSK
VAATMTATVKGKVAAASLPKEKGPKKRGKAVASSSAISAVSMMMTLDNVD
EDGLNPQVNQAAKKKWAAEKKKARKITRRTGGSGATAMDEAYDFATDFS*
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Synonyms
Publications