NO02G00790, NO02G00790 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO02G00790 vs. NCBI_GenBank
Match: CCA24818.1 (60S ribosome subunit biogenesis protein NIP7 putati [Albugo laibachii Nc14] >CCA26308.1 60S ribosome subunit biogenesis protein NIP7 putati [Albugo laibachii Nc14]) HSP 1 Score: 270.4 bits (690), Expect = 4.100e-69 Identity = 123/179 (68.72%), Postives = 149/179 (83.24%), Query Frame = 0 Query: 1 MRPLAEEETKKVFERLAKYVGGNLEQLVNRPDERYCFRYMDQRVYYVSERLMKTATNFGRDNLLSLGTCVGRFTKTEKFHISITFLDYLAQYASYKVWVKPQSEMGFLYGNNIVKSGLGRMTEAIPQYAGVVVFSMTDIPLGFGVAAQPTEVCKDLDPGANVVLHQGDVGEYLRVEDEL 180 MRPL +EE K VFE+++KY+G N++ LV RPDERYCFR + VYY SERLM+ ATN + LLSLGTCVG+FTK +KF++ ITFLD++AQYA YKVWVKP SEM FLYGNN+VKSGLGR+TE PQYAGV+V+SM D+ LGFG+AAQ TE+CKDL+P A VVLHQ D+GEYLR EDE+ Sbjct: 1 MRPLTDEELKTVFEKISKYIGANVQLLVTRPDERYCFRLHNDFVYYCSERLMRQATNISSEQLLSLGTCVGKFTKGKKFYLRITFLDHMAQYAKYKVWVKPNSEMSFLYGNNVVKSGLGRITEGTPQYAGVIVYSMNDLALGFGIAAQATEMCKDLEPTAYVVLHQADIGEYLRTEDEM 179
BLAST of NO02G00790 vs. NCBI_GenBank
Match: OWZ04263.1 (60S ribosome subunit biogenesis protein NIP7 [Phytophthora megakarya]) HSP 1 Score: 270.4 bits (690), Expect = 4.100e-69 Identity = 122/179 (68.16%), Postives = 149/179 (83.24%), Query Frame = 0 Query: 1 MRPLAEEETKKVFERLAKYVGGNLEQLVNRPDERYCFRYMDQRVYYVSERLMKTATNFGRDNLLSLGTCVGRFTKTEKFHISITFLDYLAQYASYKVWVKPQSEMGFLYGNNIVKSGLGRMTEAIPQYAGVVVFSMTDIPLGFGVAAQPTEVCKDLDPGANVVLHQGDVGEYLRVEDEL 180 MRPL ++E VFE+++KY+G N++ LV RPDE+YCFR VYY SE+LM+ +TN G D L+S+GT VG+ TK++KFH+ ITFLDYLAQYA YKVW+KP SEM FLYGNN+VKSGLGR+TE PQYAGVVV+SM DIPLGFG+AAQ TE+CKDL+P A VVLHQ D+GEYLRVEDE+ Sbjct: 1 MRPLTDDEMTTVFEKISKYIGRNVQHLVTRPDEKYCFRLHGNIVYYCSEKLMRQSTNVGTDELMSIGTAVGKLTKSKKFHLRITFLDYLAQYAKYKVWIKPNSEMSFLYGNNVVKSGLGRITEGTPQYAGVVVYSMNDIPLGFGIAAQATEMCKDLEPTAYVVLHQADIGEYLRVEDEM 179
BLAST of NO02G00790 vs. NCBI_GenBank
Match: XP_002899086.1 (60S ribosome subunit biogenesis protein NIP7 [Phytophthora infestans T30-4] >EEY62450.1 60S ribosome subunit biogenesis protein NIP7 [Phytophthora infestans T30-4]) HSP 1 Score: 269.6 bits (688), Expect = 6.900e-69 Identity = 123/179 (68.72%), Postives = 148/179 (82.68%), Query Frame = 0 Query: 1 MRPLAEEETKKVFERLAKYVGGNLEQLVNRPDERYCFRYMDQRVYYVSERLMKTATNFGRDNLLSLGTCVGRFTKTEKFHISITFLDYLAQYASYKVWVKPQSEMGFLYGNNIVKSGLGRMTEAIPQYAGVVVFSMTDIPLGFGVAAQPTEVCKDLDPGANVVLHQGDVGEYLRVEDEL 180 MR L ++E VFE+++KY+G N++ LV RPDE+YCFR VYY SE+LM+ +TN G D LLS+GT VG+ TKT+KFH+ ITFLDYLAQYA YKVW+KP SEM FLYGNN+VKSGLGR+TE PQYAGVVV+SM DIPLGFG+AAQ TE+CKDL+P A VVLHQ D+GEYLRVEDE+ Sbjct: 1 MRQLTDDEMTTVFEKISKYIGRNVQHLVTRPDEKYCFRLHGNIVYYCSEKLMRQSTNVGTDELLSIGTAVGKLTKTKKFHLRITFLDYLAQYAKYKVWIKPNSEMSFLYGNNVVKSGLGRITEGTPQYAGVVVYSMNDIPLGFGIAAQATELCKDLEPTAYVVLHQADIGEYLRVEDEM 179
BLAST of NO02G00790 vs. NCBI_GenBank
Match: XP_009830841.1 (hypothetical protein H257_07112 [Aphanomyces astaci] >ETV79905.1 hypothetical protein H257_07112 [Aphanomyces astaci]) HSP 1 Score: 268.9 bits (686), Expect = 1.200e-68 Identity = 124/179 (69.27%), Postives = 149/179 (83.24%), Query Frame = 0 Query: 1 MRPLAEEETKKVFERLAKYVGGNLEQLVNRPDERYCFRYMDQRVYYVSERLMKTATNFGRDNLLSLGTCVGRFTKTEKFHISITFLDYLAQYASYKVWVKPQSEMGFLYGNNIVKSGLGRMTEAIPQYAGVVVFSMTDIPLGFGVAAQPTEVCKDLDPGANVVLHQGDVGEYLRVEDEL 180 MRPL +EE K VFE+++KY+G N++ LV RPDE++CFR VYYVSE+LM+ ATN G + LLSLGT VG+ TK++KFH+ ITFLD+LAQYA YKVW+KP SEM FLYGNN+VKSGLGR+TE PQYAGVVV+SM D+PLGFGVAAQ TE+CKDL P VVLHQ D+GEYLRVEDE+ Sbjct: 1 MRPLTDEEMKTVFEKISKYIGRNVQHLVVRPDEKFCFRLHGDIVYYVSEKLMRQATNIGTEQLLSLGTAVGKLTKSKKFHLRITFLDHLAQYAKYKVWIKPNSEMSFLYGNNVVKSGLGRITEGTPQYAGVVVYSMNDVPLGFGVAAQATELCKDLAPTDYVVLHQADIGEYLRVEDEM 179
BLAST of NO02G00790 vs. NCBI_GenBank
Match: CCI50247.1 (unnamed protein product [Albugo candida]) HSP 1 Score: 268.1 bits (684), Expect = 2.000e-68 Identity = 122/179 (68.16%), Postives = 148/179 (82.68%), Query Frame = 0 Query: 1 MRPLAEEETKKVFERLAKYVGGNLEQLVNRPDERYCFRYMDQRVYYVSERLMKTATNFGRDNLLSLGTCVGRFTKTEKFHISITFLDYLAQYASYKVWVKPQSEMGFLYGNNIVKSGLGRMTEAIPQYAGVVVFSMTDIPLGFGVAAQPTEVCKDLDPGANVVLHQGDVGEYLRVEDEL 180 MRPL ++E K VFE+++KY+G N++ LV RPDERYCFR VYY SERLM+ ATN + LLSLGTCVG+FTK +KF++ ITFLD++AQYA YKVWVKP SEM FLYGNN+VKSGLGR+TE PQYAGV+V+SM D+ LGFG+AAQ TE+CKDL+P A VVLHQ D+GEYLR EDE+ Sbjct: 1 MRPLTDDELKSVFEKISKYIGPNVQLLVTRPDERYCFRLHHDFVYYCSERLMRQATNISSEQLLSLGTCVGKFTKGKKFYLRITFLDHMAQYAKYKVWVKPNSEMSFLYGNNVVKSGLGRITEGTPQYAGVIVYSMNDLALGFGIAAQATEMCKDLEPTAYVVLHQADIGEYLRTEDEM 179
BLAST of NO02G00790 vs. NCBI_GenBank
Match: XP_008875224.1 (hypothetical protein H310_10578 [Aphanomyces invadans] >ETV95913.1 hypothetical protein H310_10578 [Aphanomyces invadans]) HSP 1 Score: 266.2 bits (679), Expect = 7.600e-68 Identity = 122/179 (68.16%), Postives = 148/179 (82.68%), Query Frame = 0 Query: 1 MRPLAEEETKKVFERLAKYVGGNLEQLVNRPDERYCFRYMDQRVYYVSERLMKTATNFGRDNLLSLGTCVGRFTKTEKFHISITFLDYLAQYASYKVWVKPQSEMGFLYGNNIVKSGLGRMTEAIPQYAGVVVFSMTDIPLGFGVAAQPTEVCKDLDPGANVVLHQGDVGEYLRVEDEL 180 MRPL +EE K VFE+++KY+G N++ LV RPDE++CFR VYYVSE+LM+ ATN G + LLSLGT VG+ TK++KFH+ ITFLD+L+QYA YKVW+KP SEM FLYGNN+VKSGLGR+TE PQYAGVVV+SM D+PLGFGV AQ TE+CKDL P VVLHQ D+GEYLRVEDE+ Sbjct: 1 MRPLTDEEMKTVFEKISKYIGRNVQHLVVRPDEKFCFRLHGDIVYYVSEKLMRQATNIGTEQLLSLGTAVGKLTKSKKFHLRITFLDHLSQYAKYKVWIKPNSEMSFLYGNNVVKSGLGRITEGTPQYAGVVVYSMNDVPLGFGVVAQATELCKDLAPTDYVVLHQADIGEYLRVEDEM 179
BLAST of NO02G00790 vs. NCBI_GenBank
Match: EJK69647.1 (hypothetical protein THAOC_09073 [Thalassiosira oceanica]) HSP 1 Score: 258.8 bits (660), Expect = 1.200e-65 Identity = 116/180 (64.44%), Postives = 152/180 (84.44%), Query Frame = 0 Query: 1 MRPLAEEETKKVFERLAKYVGGNLEQLVNRPDERYCFRYMDQRVYYVSERLMKTATNFGRDNLLSLGTCVGRFTKTEKFHISITFLDYLAQYASYKVWVKPQSEMGFLYGNNIVKSGLGRMTEAIPQYAGVVVFSMTDIPLGFGVAAQPTEVCKDLDPGANVVLHQGDVGEYLR-VEDEL 180 MRPL EEETK +F++LA+Y+G ++E+L+NR DER+CFR + RVYY+SE +MK +T+ +DNLL GTC+G+FTK+ KF + +T LDYLAQY+ YKVW+KP +EM FLYGNN++KSGL R+TE+ PQYAGVVV+++ DIPLGFGVAAQ TE CK+LDP ANVVLHQ DVGE+LR +ED++ Sbjct: 198 MRPLTEEETKTLFQKLAEYMGRSIERLINRSDERHCFRLIKDRVYYISESVMKASTSINKDNLLHCGTCLGKFTKSGKFRLHVTALDYLAQYSKYKVWLKPSAEMSFLYGNNVIKSGLARITESTPQYAGVVVYNLADIPLGFGVAAQTTEACKELDPTANVVLHQADVGEFLRGLEDDV 377
BLAST of NO02G00790 vs. NCBI_GenBank
Match: XP_002286628.1 (predicted protein [Thalassiosira pseudonana CCMP1335] >EED96269.1 predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 253.8 bits (647), Expect = 3.900e-64 Identity = 114/178 (64.04%), Postives = 148/178 (83.15%), Query Frame = 0 Query: 1 MRPLAEEETKKVFERLAKYVGGNLEQLVNRPDERYCFRYMDQRVYYVSERLMKTATNFGRDNLLSLGTCVGRFTKTEKFHISITFLDYLAQYASYKVWVKPQSEMGFLYGNNIVKSGLGRMTEAIPQYAGVVVFSMTDIPLGFGVAAQPTEVCKDLDPGANVVLHQGDVGEYLRVEDE 179 MRPL EEETK +F++LA+Y+G ++E+L+NR DER+CFR + RVYY+SE +MK +T+ +DNLL GTC+G+FTK+ KF + IT LDYLAQY+ YKVW+K +EM FLYGNN++KSGL R+TE PQYAGVVV++++DIPLGFGVAAQ T+ CK+LDP ANVVLHQ DVGE+LR +E Sbjct: 1 MRPLTEEETKTLFQKLAEYMGRSVERLINRSDERHCFRLIKDRVYYISESVMKASTSINKDNLLHCGTCLGKFTKSGKFRLHITALDYLAQYSKYKVWLKQSAEMSFLYGNNVIKSGLARITEGTPQYAGVVVYNLSDIPLGFGVAAQTTDACKELDPTANVVLHQADVGEFLRGLEE 178
BLAST of NO02G00790 vs. NCBI_GenBank
Match: XP_002185889.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >ACI65359.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 252.7 bits (644), Expect = 8.700e-64 Identity = 114/178 (64.04%), Postives = 147/178 (82.58%), Query Frame = 0 Query: 1 MRPLAEEETKKVFERLAKYVGGNLEQLVNRPDERYCFRYMDQRVYYVSERLMKTATNFGRDNLLSLGTCVGRFTKTEKFHISITFLDYLAQYASYKVWVKPQSEMGFLYGNNIVKSGLGRMTEAIPQYAGVVVFSMTDIPLGFGVAAQPTEVCKDLDPGANVVLHQGDVGEYLRVEDE 179 MRPL EEETK +F +L++Y+G N+E+L+NR DER+CFR + R YY+SE +MK+AT+ GR++LL +GTC+G+FTKT KF + IT L+Y++QYA YKVWVKP +EM FLYGN++ K+GL RMTE PQY+GVVV+SM+DIPLGFGVAAQ TE C+ LDP NVVLHQ D+GEYLR +E Sbjct: 1 MRPLTEEETKSLFLKLSEYIGKNIERLINRSDERHCFRLIKDRCYYISESIMKSATSIGREHLLHVGTCMGKFTKTGKFRLHITALEYISQYAKYKVWVKPSAEMSFLYGNHVSKNGLARMTENTPQYSGVVVYSMSDIPLGFGVAAQSTEHCQQLDPTGNVVLHQADIGEYLRGLEE 178
BLAST of NO02G00790 vs. NCBI_GenBank
Match: NP_001096512.1 (60S ribosome subunit biogenesis protein NIP7 homolog [Xenopus tropicalis] >A4QND5.1 RecName: Full=60S ribosome subunit biogenesis protein NIP7 homolog >AAI35469.1 LOC100125143 protein [Xenopus tropicalis] >ATO97561.1 hypothetical protein, partial [synthetic construct]) HSP 1 Score: 251.5 bits (641), Expect = 1.900e-63 Identity = 117/180 (65.00%), Postives = 143/180 (79.44%), Query Frame = 0 Query: 1 MRPLAEEETKKVFERLAKYVGGNLEQLVNRPDERYCFRYMDQRVYYVSERLMKTATNFGRDNLLSLGTCVGRFTKTEKFHISITFLDYLAQYASYKVWVKPQSEMGFLYGNNIVKSGLGRMTEAIPQYAGVVVFSMTDIPLGFGVAAQPTEVCKDLDPGANVVLHQGDVGEYLRVEDELS 181 MRPL +EETK +FE+L+KY+G N++ LV+RPD YCFR + RVYYVSER++K ATN RD L+SLGTC G+FTKT KF + +T LDYLA YA YKVWVKP +E FLYGN+++KSGLGR+TE QY GVVV+SM DIPLGFGVAA+ T+ C+ LDP A VV HQ DVGEY+R ED L+ Sbjct: 1 MRPLTDEETKAMFEKLSKYIGENIKLLVDRPDGTYCFRLHNDRVYYVSERILKLATNIARDKLVSLGTCFGKFTKTHKFRLHVTALDYLAPYAKYKVWVKPGAEQSFLYGNHVLKSGLGRITENTSQYQGVVVYSMADIPLGFGVAAKSTQECRKLDPMAIVVFHQADVGEYIRHEDTLT 180 The following BLAST results are available for this feature:
BLAST of NO02G00790 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO02G00790 ID=NO02G00790|Name=NO02G00790|organism=Nannochloropsis oceanica|type=gene|length=4476bpback to top protein sequence of NO02G00790.1 >NO02G00790.1-protein ID=NO02G00790.1-protein|Name=NO02G00790.1|organism=Nannochloropsis oceanica|type=polypeptide|length=181bpback to top Synonyms
Publications
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