NO02G00660, NO02G00660 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO02G00660 vs. NCBI_GenBank
Match: EWM30557.1 (Cyclophilin-like peptidyl-prolyl cis-trans isomerase domain protein [Nannochloropsis gaditana]) HSP 1 Score: 328.9 bits (842), Expect = 1.800e-86 Identity = 173/331 (52.27%), Postives = 215/331 (64.95%), Query Frame = 0 Query: 7 HAVAPAFSGSPYRNAKYTKPSRGSITFLRDRILQVLFLVLGICYVGLIIYYRSMLAQDE----ASQQALSSTLTTLQDRHSEQMARQKAKLTEAQMALKTKEDALVKAERQLQAMDSVVEHLEKNQLVQALRKQNLFFNHLRWGKGPTRVVLEMRAVKGDDERAVEEVELEMAPFDVMPHVIHWFLTMVETGYWDGCHLIRNARHVLQFNCHARTAVTGNDRLLARVPGAGVADGKIGGFQSIVFQEFSPDFNHLPFTLGVAGRPGGEDFYVNLVENTISHGPGGQGPEPDPCFAKVVRGREVLEGWHGRLGNEFLDPKEYVLVKRMYIKG 334 H V + +P K+ K S L R L++L LG YVG+I Y RS+L + + + + S+ L L D+ SE++A NQL+Q+LR QNL FNHLRWG+GP RV+LE+ G E A EEVE E+APF+++PHV HWFLT+VETG+WDGCHLIRNA HVLQFNC RTAV+GN LLARVPGA G+I G +SIVFQEF+PDFNHLPFTLGVAGRPGGEDFYVNLV+NT +HGPGGQGPEPDPCFA+VV+G++VLE H +L FL +++VL++RM IKG Sbjct: 9 HRVHGPTTSTPEYKVKHNKSSHVRGILLNSRALKLLLFFLGFLYVGVIFYCRSLLHERDDAFKSEKLKWSNELYRLHDQRSEELAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNQLIQSLRDQNLLFNHLRWGEGPVRVLLELGGSPGTVEEA-EEVEFELAPFELLPHVTHWFLTLVETGFWDGCHLIRNAPHVLQFNCRGRTAVSGNPSLLARVPGA--EHGRITGRKSIVFQEFAPDFNHLPFTLGVAGRPGGEDFYVNLVDNTRNHGPGGQGPEPDPCFAEVVKGKDVLEKVHQKLTTGFLKEEDFVLIRRMLIKG 336
BLAST of NO02G00660 vs. NCBI_GenBank
Match: ETO30840.1 (hypothetical protein RFI_06276 [Reticulomyxa filosa]) HSP 1 Score: 153.3 bits (386), Expect = 1.300e-33 Identity = 99/312 (31.73%), Postives = 154/312 (49.36%), Query Frame = 0 Query: 37 RILQVLFLVLGICYVGLI----IYY-----RSMLAQDEASQQALSSTLTTLQDRHSEQMARQKAKLTEAQMALKTKEDALVKAERQLQAMDSVVEHLEKNQ---------------------LVQALRKQNLFFNHLRW----GKGPTRVVLEMRAVKGDDERAVEEVELEMAPFDVMPHVIHWFLTMVETGYWDGCHLIRNARHVLQFNCHAR--------TAVTGNDRLLARVPGAGVADGKIGGFQSIVFQEFSPDFNHLPFTLGVAGRPGGEDFYVNLVENTISHGPGGQGPEPDPCFAKVVRGREVL 307 R Q++ ++ + +G + IYY S +A D+A++ + L Q++ + +T ALK KE + + ++ + V L +N L +L K +++ + L++ G V + R +E+EMAPF++MPH +FL M+ +G+W+GCH RNA HV+Q NCH R V + A+V +G+ SI FQE+S ++ H PFT+G+AGRPGG DFY+NLV+N +HGPGGQ E DPCF K+V+G EV+ Sbjct: 480 RWYQLVIVIQCVALIGALLTTSIYYTHSNDNSAMANDKANENGSGANLYVQNKNEVRQLSLKMEAIT---AALKQKESEVQRNLETIRQLTDEVNELRQNSKDNGNEDEAHDEADSNKRLHALFSSLAKTDMYLSELQYHTLNPNGEVTVQINTR---------FGIIEIEMAPFNIMPHTTRYFLQMIASGFWNGCHFFRNANHVIQANCHHRCVACSFQMCCVVCKENAQAKVFFWIGTNGRHEYEPSISFQEYSEEYVHKPFTVGIAGRPGGPDFYINLVDNIRNHGPGGQDGEADPCFGKIVKGMEVI 779
BLAST of NO02G00660 vs. NCBI_GenBank
Match: GBG28892.1 (Hypothetical Protein FCC1311_051132 [Aurantiochytrium sp. FCC1311]) HSP 1 Score: 129.8 bits (325), Expect = 1.600e-26 Identity = 83/256 (32.42%), Postives = 133/256 (51.95%), Query Frame = 0 Query: 85 QMARQKAKLTEAQMALKTKEDALVKAERQLQAMDSVVEHLEKNQLVQALRKQNLFFNHLRWGKG-PTRVVLEMRAVKGDDERAVEEVELEMAPFDVMPHVIHWFLTMVETGYWDGCHLIRNARHVLQFNCHARTAVTGNDRLLARVPGAGVADGKIGGFQSIVFQEFSPDFNHLPFTLGVAGRPGGEDFYVNLVENTISHGPGGQG-----PEPDPCFAKVVRGREVLEGWH--GRLGNEFLDPKEYVLVKRMYIK 333 QM R K + ++ +++E+A + + +LQA D ++ ++ + K + +G P RV + +R + +++ EMAP + +P + +F+ VE G WDGC IRNA HVLQ + + T G R +P G SI FQE+S + H +T+G+AGRPGG DFY++ V+NT +HGPGGQ E D CF +V G +V++ H +L + F EY+ +K M ++ Sbjct: 126 QMERDLRK-CQGKLEDRSEEEAWGEEKAKLQARDRAMQK-RLERVEDGMAKLSRHVLRETFGSAEPYRVRMTVRFPESMGAPYEQDILFEMAPSEHVPTGVLYFMNQVEAGLWDGCSFIRNAHHVLQASPQS-TEKHGLHRRFKELPMQG---------SSIAFQEYSDKYKHTKYTIGLAGRPGGPDFYISTVDNTRNHGPGGQSSYDLPAEADTCFGRVAEGHDVVDRMHRARKLKDNFESLAEYIEIKTMRVE 369
BLAST of NO02G00660 vs. NCBI_GenBank
Match: GAX10737.1 (hypothetical protein FisN_14Lh256 [Fistulifera solaris]) HSP 1 Score: 128.3 bits (321), Expect = 4.600e-26 Identity = 90/277 (32.49%), Postives = 133/277 (48.01%), Query Frame = 0 Query: 65 EASQQALSSTLTTLQDRHSEQMARQKAKLTEAQMALKTKEDALVKAERQLQAMDSVVEHLEKNQLVQALRKQNLFFNHLRWGKGPTRVVLEMRAVKGD----DERAVEEVELEMAPFDVMPHVIHWFLTMVETGYWDGCHLIRNARHVLQFNCHARTAVTGNDRLLARVPGAG-VADGKIGGFQSIVFQEFSPDFNHLPFTLGVAGRPGGEDFYVNLVENTISHGPGGQG-----PEPDPCFAKVVRGREVLEGWHGRLGNE--FLDPKEYVLVKRM 330 E +L+S L L + + + +A A + T E + + L+ + ++L+K + L K +G GP VV+E+ D + + +E+A + MPH + WFL V+ +DGC RNA HV+Q G P AG V K G +S++FQE+S H+ +TLG AGRPGG DFY+++ +NT +HGPGGQG E DPCFAKVV+G V + H E + + YV +K M Sbjct: 72 ETQLSSLNSRLMALSEEKANLERKLQASTPAAAGNMPTTEAMQKRIDNLLKFKQKMKDNLQKWSKERLLAK---------YGPGPHYVVMEVAFDPSSNIYGDGPDTDHITIELASEEDMPHTVLWFLDQVDRRLYDGCSFHRNAGHVIQ---------GGPAPNFLTPPNAGLVKHFKESGVESVLFQEYSEKHPHVKYTLGYAGRPGGPDFYISMQDNTRNHGPGGQGSYEDPTEADPCFAKVVQGFAVADRIHKSAVQEGSYKRMQHYVAIKTM 330
BLAST of NO02G00660 vs. NCBI_GenBank
Match: EJK46173.1 (hypothetical protein THAOC_35172 [Thalassiosira oceanica]) HSP 1 Score: 125.6 bits (314), Expect = 3.000e-25 Identity = 81/231 (35.06%), Postives = 118/231 (51.08%), Query Frame = 0 Query: 93 LTEAQMALKTKEDALVKAERQLQAMDSVVEHLEKNQLVQALRKQNLFFNHLRWGKGPTRVVLEMRAVKGDDERAVEE---------VELEMAPFDVMPHVIHWFLTMVETGYWDGCHLIRNARHVLQFNCHARTAVTGNDRLLARVPGA--GVADGKIGGFQSIVFQEFSPDFNHLPFTLGVAGRPGGEDFYVNLVENTISHGPGGQG-----PEPDPCFAKVVRGREVLE 308 L E + ++ +EDAL +D++VE + +AL +G GP V LE+ + ++ E +E+E+AP MP ++ FL V WDGC + NA H+LQ H R A + A +P DGK+ + FQE+S DF H +TLG AGRPGG DFYVN ++N+++HGPGGQG E DP F ++VRG E+++ Sbjct: 288 LDEYEEYVQMREDAL------WDKIDALVESMSAESRREALE---------WFGPGPHHVQLEIEYPRWSEDGPSEPDDWPRVRGVLEIELAPIQAMPIAVNLFLQQVHHKLWDGCVFVINAMHILQAGPH-RFAPDNDGYYDANIPELMDRFVDGKL---DKMPFQEYSKDFPHEQYTLGFAGRPGGPDFYVNKIDNSVNHGPGGQGHHDLHVEADPSFGRIVRGVEIIQ 499
BLAST of NO02G00660 vs. NCBI_GenBank
Match: GAX23566.1 (hypothetical protein FisN_14Hh256 [Fistulifera solaris]) HSP 1 Score: 125.6 bits (314), Expect = 3.000e-25 Identity = 93/278 (33.45%), Postives = 137/278 (49.28%), Query Frame = 0 Query: 65 EASQQALSSTLTTLQDRHSEQMARQKAKLTEAQMALKTKEDALVKAERQLQAMDSVVEHLEK-NQLVQALRKQNLFFNHLRWGKGPTRVVLEMRAVKGD----DERAVEEVELEMAPFDVMPHVIHWFLTMVETGYWDGCHLIRNARHVLQFNCHARTAVTGNDRLLARVPGAG-VADGKIGGFQSIVFQEFSPDFNHLPFTLGVAGRPGGEDFYVNLVENTISHGPGGQG-----PEPDPCFAKVVRGREVLEGWHGRLGNE--FLDPKEYVLVKRM 330 E +L+S L L SE+ A + KL +A T E + +D++++ +K +Q K+ L ++G GP V +E+ D + + +E+A + MPH + WFL V+ +DGC RNA HV+Q G P AG V K G +S++FQE+S + H+ +TLG AGRPGG DFY+++ +NT +HGPGGQG E DPCFAKVV+G V + H E + + YV +K M Sbjct: 72 ENQLSSLNSRLMAL----SEEKANLERKLQAPVVAGNTP-----STEAMQKRIDNLLKFKQKMKDNLQKWSKERLL---AKYGAGPHYVDIEVAFDPSSNIYGDGPDTDHITIELASEEDMPHTVLWFLDQVDRRLYDGCSFHRNAGHVIQ---------GGPAPNFLTPPNAGLVKHFKESGVESVLFQEYSEKYPHVKYTLGYAGRPGGPDFYISMQDNTRNHGPGGQGSYEDPTEADPCFAKVVQGFAVADRIHKSAVQEGSYKRMQHYVAIKTM 328
BLAST of NO02G00660 vs. NCBI_GenBank
Match: OEU21914.1 (hypothetical protein FRACYDRAFT_232060 [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 120.6 bits (301), Expect = 9.600e-24 Identity = 85/271 (31.37%), Postives = 144/271 (53.14%), Query Frame = 0 Query: 51 VGLIIYYRSMLAQDEASQQALSSTLTTLQDR--HSEQMARQKAKLTEAQMALKTKEDALVKAERQLQAMDSVVEHLE--KNQLVQALRKQNLFFNHLRWGKGP--TRVVLEMRAVKGDDERAVEEVELEMAPFDVMPHVIHWFLTMVETGYWDGCHLIRNARHVLQFNCHARTAVTGNDRLLARVPGAGVADGKIGGFQSIVFQEFSPDFNHLPFTLGVAGRPGGEDFYVNLVENTISHGPGGQG-----PEPDPCFAKVVRGREVLEGWH 311 + L I + S +A+ + + L S + ++ ++Q+ +K +L E QM +KE E Q++ ++ +H K ++ + ++ + R+G GP ++++ + G D++ + +E+AP + MPH ++WFL V+ +DGC RNA HV+Q + + +L R K GF I+FQE+SP+ H+ F+LG +GRPGG DFY+++ +N+ HGPGGQ E D CFAKVV G +V+E H Sbjct: 157 IDLSIRFDSKIAELQKENKELHSKVGNEKELIILNQQLKDEKNRL-EFQMKDVSKE-LQQHYEGQIEILNRHNDHFTTYKKKMQENIQLMSRSALIERYGLGPHFVEMIVQFDSHMGRDDQG--SIIVELAPVEDMPHAVYWFLEQVQRKLYDGCSFHRNAAHVIQAGPASNFLSPPDPQLSKRF--------KDAGFDKILFQEYSPNSPHVKFSLGYSGRPGGPDFYISMQDNSKIHGPGGQNNFEDPEEADTCFAKVVNGFDVVERIH 415
BLAST of NO02G00660 vs. NCBI_GenBank
Match: EJK76147.1 (hypothetical protein THAOC_02105 [Thalassiosira oceanica]) HSP 1 Score: 119.0 bits (297), Expect = 2.800e-23 Identity = 82/302 (27.15%), Postives = 149/302 (49.34%), Query Frame = 0 Query: 58 RSMLAQDEASQQALSSTLTTLQDRHSEQM-ARQKAKLTEAQMALKTKEDALVKAERQLQAMDSVVEHLEKNQ-----LVQALRK---QNLFFNHLRW-GKGPTRVVLEM---RAVKGDDERA------VEEVELEMAPFDVMPHVIHWFLTMVETGYWDGCHLIRNARHVLQFN-----------CHARTAVTGNDRLLARVPGAGVADGKIGGFQSIVFQEFSPDFNHLPFTLGVAGRPGGEDFYVNLVENTISHGPGGQ------GPEPDPCFAKV--VRGREVLEGWHGRLGNEFLDPK 322 ++ L + +A+ L+ T+ + ++Q+ +Q L A+ L+ + + K + ++ D V ++++K + + L K QN + W G GP +V L + +A D+ A ++ +++AP D+MPH ++ FL V G W+GCH+ +N+ H++QF R + + + D + + +QE+S D+ H+ +T+G+AGRP G DFY+N ++N++ HGPGGQ E DPCF KV V+ E+L+ + N +DP+ Sbjct: 214 KAQLEEQQAAHADLTKQQTSSRGNLNDQLRKKQDVSLDHAKNELEDRIEDTAKYKAMVEGKDEVEQYMKKREEALWKRIDVLEKRVGQNSWREAEEWFGSGPHKVELTIEYPKAPSADNTDASTWPMTQAKLIIDLAPLDMMPHTVNLFLQQVHHGLWEGCHVSKNSNHIVQFGPSYDDKDHPAFIEERRPQHDGENFEGKTHYSYFYDYSL---DKVTYQEYSKDYPHIQYTVGMAGRPSGPDFYINKIDNSMIHGPGGQTNRDDFHNEADPCFGKVIDVKSLEILK----EIDNIPMDPE 508
BLAST of NO02G00660 vs. NCBI_GenBank
Match: XP_002286479.1 (predicted protein [Thalassiosira pseudonana CCMP1335] >EED96120.1 predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 114.8 bits (286), Expect = 5.200e-22 Identity = 55/140 (39.29%), Postives = 80/140 (57.14%), Query Frame = 0 Query: 172 LEMAPFDVMPHVIHWFLTMVETGYWDGCHLIRNARHVLQFNCHARTAVTGNDRLLARVPGAGVADGKIGGFQSIVFQEFSPDFNHLPFTLGVAGRPGGEDFYVNLVENTISHGPGGQG-----PEPDPCFAKVVRGREVL 307 +EMAP +MP ++ FL V W+GC + NA H+LQ H + G+ + K+ + FQE+ +F H+ TLG AGRPGG DFY+N ++N+++HGPGGQG E DPCF K+++G E+L Sbjct: 396 VEMAPLSLMPVAVNLFLQQVHHKLWNGCSFVINAMHILQAGPH-QYGKNGDYNANWEPLNRRFQEAKL---DKMPFQEYHEEFPHVQLTLGYAGRPGGPDFYINKIDNSVNHGPGGQGHHDLHEEADPCFGKIIKGMELL 531
BLAST of NO02G00660 vs. NCBI_GenBank
Match: XP_002286483.1 (predicted protein [Thalassiosira pseudonana CCMP1335] >EED96124.1 predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 113.6 bits (283), Expect = 1.200e-21 Identity = 73/195 (37.44%), Postives = 99/195 (50.77%), Query Frame = 0 Query: 146 GKGPTRVVLEMRAVKGDDERA-VEEVELEMAPFDVMPHVIHWFLTMVETGYWD--GCHLIRNARHVLQ---FNCHARTAVTGNDRLLARVPGAGVADGKIGGFQSIVFQEFSPDFNHLPFTLGVAGRP-GGEDFYVNLVENTISHG---------------------PGGQG-----PEPDPCFAKVVRGREVLE 308 G GP V + V DDE++ E+ LE+AP D+MPH IH FL+ +E GYW ++ NA HVLQ C ++ GN PG D K G S+ FQE+ P + H +T+G+AGRP G +FY+NL+ NT+ HG G G EPDPCF KVV+G +V++ Sbjct: 438 GAGPHLVSI---IVDLDDEQSESNEIVLELAPLDLMPHTIHLFLSQIEEGYWSRGTPAIVINAGHVLQACPHPCLESVSLGGN------YPGDPYHDMKHAGLDSVSFQEYHPSYPHEKYTIGLAGRPHSGPEFYINLLNNTLDHGTVEQRKQELGDGYADYLKAAMEGEDGLDEKVMEPDPCFGKVVKGFDVVD 623 The following BLAST results are available for this feature:
BLAST of NO02G00660 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO02G00660 ID=NO02G00660|Name=NO02G00660|organism=Nannochloropsis oceanica|type=gene|length=1214bpback to top protein sequence of NO02G00660.1 >NO02G00660.1-protein ID=NO02G00660.1-protein|Name=NO02G00660.1|organism=Nannochloropsis oceanica|type=polypeptide|length=334bpback to top Synonyms
Publications
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